Carg07233 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAACGTTTACTCAATTCAGCTCCCCATTAAGCAATAAGCAATTAGGTCACAAACCAGTTGGGAATCCATTGGGACCCATTAACGGATCGATTCGAAACGAAATCCTTATTGAGCGATCGAAGTCCTTTCCTTGATCTTTTCTCTTCTTCCTTTTCAAGTTCATTGATCGCGATCGCCGAAGAGGAGCAAAAAGATGGGGGCATCTCACTCAGTGGCAGAGAAATCCATCCATGAATTCACAGTCAAGGTTTTAACCTCCCTTCCCCACCCCCCCACTACTCCATATCTCTCTTTTTTGCCTTTTTTCTGTCTCGATCTGTGCTTCGTCTCTTTCCTCAGAGGGGGACCTCCATTCTTTTAGAGCATCTTTTTTCTTAATGAGATCGTGCTGGTGGAGCGCAGGATTTCAAAGGCAAGGACGTAAACCTCAATGACTATAAGGGGAAGATCCTTCTTGTGGTTAACGTTGCGTCTAAATGGTTTGTTTGTCGCCTTCTTTTGTGGATTCTTTCTCTGTGGGTCTCCCATGTTTGGCTTAATTACTGAGTATTGTACTTCCTGTGTCTGTTTTCGCATCTGAACAGTGGGTTTACAGATTTGAATTACAAGCAGTTGACTGAACTGTACAACCGATACAAGGATGAAGGTTTCGTTTCCCCCTTTTTGAGTTATTCATTTATTATTTAATCAACTGTGAGCCCGTTTATCATCAACAGTTCATAGCTTTTCCTGCTGCTTGATAAACTGAATTCAATTAAATTGCATATATAATTAGTGTCCATAATTGCTTTCTTCTGCATAGTACTGGGCCTCATTCTTTAGGTGCTACAAGATCTCGTACATTGGAACCTATGGTTATGAAACTGAATTCATTAGTATGGAACATTTTCTTTTCCAAGTGAAATCCCCTGGTACATGAAAGAGTGCTTTCATTGTTAGTGGAATAAAAAGCGTTTGTATTTTAATGCATTAGAAAAAGAAGAAAAATATCGAAGTATGATGAGCAAGGATTTTGTGAACCACACTAACCATTTAAAAGAAATCAAAGAGAGAAGTTATAAATCTTAAAACAAGGAATCTACCGGGGCCCTATAGTTGTAGGGCGTGTCTGAGCCCTGTCCTGAGAAAAGACGGGCCTTATTCCACAGACACTCCTCTCGCAAGAAACAACAACTTCATGTGCAGTTATGCTTTCTCACGAATGGTCTGCTCATTGAAAGGAACTGTGAAAGAATAATTTTGCTAGATGGGAGAGAAGGAAACGAGGAAGATATTTTTTTCATTTTTGGAGACAAAAGCTTTCTACAAAGTCCATTCCCTGTTTTTCTCTGTAGTTTTTCAAAAAGGTGTTCTGTGTGGGTTGGTATTTGTTTTTCCATTCTGCCCTGTTCACTGTGGAAGATTCAAAATTAGAACACCTTGAACTACCAAAGGGCTATAGAGAATGAGTCGAAGCCATGGACCCCTACTTAGAATTTAATATTTTACGAGTTTCTTTGGCAACTAAATATATTAGGGTTAGATGGTTGCCCCATGAGAATAGTCGACGAGCTGCCTTCAAGCAGGCCAGACACTCATGGAGAATATATGTATATAAACTGCTCTGTAAACACGTCTAGTTGTAAAAGGAAAGCGGTTTTGACTTCTTCACTCTGTTATTGAATTGTAAGAATAAAAAGAAGGTCACAAATTATATGATATATGTATATATATCCCTGATGTTTTTCTTGGCTGATCCTTAGTGCATTTTCTTTGCAACCTCGGTAATGGTATTGAAGCATTCTGTATCTTCTTTGGTTATTAGTTGTTTCTTTTATTTGGTTCTTACACTATAGATTTACTGTCCTCAGACTTTGAAATACTGGCATTTCCATGCAATCAGTTTCTGAAGCAAGAGCCCGGAACAAGTGAGGTGGCTCAAGAATTTGCTTGTACAAGGTACAAAGCAGAATATCCAATCTTCCAAAAGGTAATGATGCTTTTCTAATAAACCTTGTTTTTGACTTTCACTGAAGGTTAAGAATCATATTCTGATTATGTGCCATTAACTCAGTTATATTCAAATATCTGAACTGTGAATTTTTGTCCTTATGTTGTCTATGAAGATTTTGGATACATTATGATAGAAGTTTCACCATTTGCTGAATTTGATGCATTGTTATTTGAGCAGCTTCTTGAAGTTCCTATGATTTAAACTATCACAATAGATAGAACTCATGCGGGGTACGAACGATAGAATTTTTTAAACTTTTAAAAGGCATATTAATTTGCTCCTTAAGTTTGTTAGGAGTAGGATCACGATATCAAATTTGTTCTCTTTTTCTTCTAGTTTGTTCTCTCACTCGAGCTTTAAAATGTTGAAATTGACCGAAATGTTGAGGTCCCAATATTATGAAAATGTTGATGGAAATATCAATAAAATGTTGATATCGATAGAAATTTCTGAAAAATTCCACAAAACAAAAAAAAAATTAAATTAATCAATTAACATTCTTAAACTTCTTATATAATTTAAAATGCTTACTATTTGTATTACTTTCACATTAGTGACATTTTGTGGCTTCTTAGTTATGTTTCATCAACTTTTTTACAGTTCAATCAATTTGTTTTTTTTTTTTGGGTCACGCAGATACGTGTGAACGGGCCAGACGCGGCGCCAGTCTACAAGTTCCTCAAAGCAACTAGCAATGGGTTCTTAGGCACCCGGATAAAGTGGAATTTCACCAAGTTCTTGGTAGATAAGGAAGGGGTTGTCATCAACCGCTATGGCCCGTCCACCACTCCATTGTCTATTGAGGTACGTTGTCCTAAGCAGCCCCATGAAACTCATTTCCTTGATAATGAAACTGCTTTGTTGTTGATCGTAGCATTGTTTTTTTTCCAATTACTGTCTCAGAGTGACATAAAAAAAGCATTGGGAATTGCTCGACTTACCTCTAGACCTCATGCTTAATGTAAGTCCACATGAGTTAAAGTAATTGAAGACACTAATAGAATATAACCAAATGGTAAAGGTGTATTCTCCCTTGGCTGTAATTATTGTATTAGCAGTAATAGTCCAACGGGTCTGTCTGTGTGCGTGCGGGCGTGCGCGCGTGCGTGTTTCTTCTTGTATTTCGAGGGAATGTAAGTAGTGGCTATTCTTTGTGTTGTGTAGTATTTTTGGAGGCTGTTATTTGGATATGTTTATTTGTTTGATTTGTATTAGGAAGTGCATTATGGATGGCTAAGTTATCTTCATAAACGTTGTTTTGCTAGTTTGATCATGCAAAGTTGTTTATGACGAATATCGAACGGGAAGCGTAGATTGTTTTAGAAGTAATTTATACATTTCTATATGTGAAATAAATGTA AAACGTTTACTCAATTCAGCTCCCCATTAAGCAATAAGCAATTAGGTCACAAACCAGTTGGGAATCCATTGGGACCCATTAACGGATCGATTCGAAACGAAATCCTTATTGAGCGATCGAAGTCCTTTCCTTGATCTTTTCTCTTCTTCCTTTTCAAGTTCATTGATCGCGATCGCCGAAGAGGAGCAAAAAGATGGGGGCATCTCACTCAGTGGCAGAGAAATCCATCCATGAATTCACAGTCAAGGATTTCAAAGGCAAGGACGTAAACCTCAATGACTATAAGGGGAAGATCCTTCTTGTGGTTAACGTTGCGTCTAAATGTGGGTTTACAGATTTGAATTACAAGCAGTTGACTGAACTGTACAACCGATACAAGGATGAAGACTTTGAAATACTGGCATTTCCATGCAATCAGTTTCTGAAGCAAGAGCCCGGAACAAGTGAGGTGGCTCAAGAATTTGCTTGTACAAGGTACAAAGCAGAATATCCAATCTTCCAAAAGATACGTGTGAACGGGCCAGACGCGGCGCCAGTCTACAAGTTCCTCAAAGCAACTAGCAATGGGTTCTTAGGCACCCGGATAAAGTGGAATTTCACCAAGTTCTTGGTAGATAAGGAAGGGGTTGTCATCAACCGCTATGGCCCGTCCACCACTCCATTGTCTATTGAGAGTGACATAAAAAAAGCATTGGGAATTGCTCGACTTACCTCTAGACCTCATGCTTAATGTAAGTCCACATGAGTTAAAGTAATTGAAGACACTAATAGAATATAACCAAATGGTAAAGGTGTATTCTCCCTTGGCTGTAATTATTGTATTAGCAGTAATAGTCCAACGGGTCTGTCTGTGTGCGTGCGGGCGTGCGCGCGTGCGTGTTTCTTCTTGTATTTCGAGGGAATGTAAGTAGTGGCTATTCTTTGTGTTGTGTAGTATTTTTGGAGGCTGTTATTTGGATATGTTTATTTGTTTGATTTGTATTAGGAAGTGCATTATGGATGGCTAAGTTATCTTCATAAACGTTGTTTTGCTAGTTTGATCATGCAAAGTTGTTTATGACGAATATCGAACGGGAAGCGTAGATTGTTTTAGAAGTAATTTATACATTTCTATATGTGAAATAAATGTA ATGGGGGCATCTCACTCAGTGGCAGAGAAATCCATCCATGAATTCACAGTCAAGGATTTCAAAGGCAAGGACGTAAACCTCAATGACTATAAGGGGAAGATCCTTCTTGTGGTTAACGTTGCGTCTAAATGTGGGTTTACAGATTTGAATTACAAGCAGTTGACTGAACTGTACAACCGATACAAGGATGAAGACTTTGAAATACTGGCATTTCCATGCAATCAGTTTCTGAAGCAAGAGCCCGGAACAAGTGAGGTGGCTCAAGAATTTGCTTGTACAAGGTACAAAGCAGAATATCCAATCTTCCAAAAGATACGTGTGAACGGGCCAGACGCGGCGCCAGTCTACAAGTTCCTCAAAGCAACTAGCAATGGGTTCTTAGGCACCCGGATAAAGTGGAATTTCACCAAGTTCTTGGTAGATAAGGAAGGGGTTGTCATCAACCGCTATGGCCCGTCCACCACTCCATTGTCTATTGAGAGTGACATAAAAAAAGCATTGGGAATTGCTCGACTTACCTCTAGACCTCATGCTTAA MGASHSVAEKSIHEFTVKDFKGKDVNLNDYKGKILLVVNVASKCGFTDLNYKQLTELYNRYKDEDFEILAFPCNQFLKQEPGTSEVAQEFACTRYKAEYPIFQKIRVNGPDAAPVYKFLKATSNGFLGTRIKWNFTKFLVDKEGVVINRYGPSTTPLSIESDIKKALGIARLTSRPHA
BLAST of Carg07233 vs. NCBI nr
Match: XP_022953907.1 (protein HUA2-LIKE 2-like [Cucurbita moschata]) HSP 1 Score: 364.0 bits (933), Expect = 2.9e-97 Identity = 176/178 (98.88%), Postives = 177/178 (99.44%), Query Frame = 0
BLAST of Carg07233 vs. NCBI nr
Match: XP_023549407.1 (protein HUA2-LIKE 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 347.1 bits (889), Expect = 3.7e-92 Identity = 167/170 (98.24%), Postives = 168/170 (98.82%), Query Frame = 0
BLAST of Carg07233 vs. NCBI nr
Match: XP_022991770.1 (protein HUA2-LIKE 2-like [Cucurbita maxima]) HSP 1 Score: 337.8 bits (865), Expect = 2.2e-89 Identity = 163/170 (95.88%), Postives = 165/170 (97.06%), Query Frame = 0
BLAST of Carg07233 vs. NCBI nr
Match: KGN44868.1 (hypothetical protein Csa_7G392410 [Cucumis sativus]) HSP 1 Score: 321.2 bits (822), Expect = 2.2e-84 Identity = 151/174 (86.78%), Postives = 164/174 (94.25%), Query Frame = 0
BLAST of Carg07233 vs. NCBI nr
Match: XP_011659332.1 (PREDICTED: HUA2-like protein 3 isoform X2 [Cucumis sativus]) HSP 1 Score: 321.2 bits (822), Expect = 2.2e-84 Identity = 151/174 (86.78%), Postives = 164/174 (94.25%), Query Frame = 0
BLAST of Carg07233 vs. TAIR10
Match: AT2G48150.1 (glutathione peroxidase 4) HSP 1 Score: 267.3 bits (682), Expect = 6.7e-72 Identity = 123/167 (73.65%), Postives = 146/167 (87.43%), Query Frame = 0
BLAST of Carg07233 vs. TAIR10
Match: AT3G63080.1 (glutathione peroxidase 5) HSP 1 Score: 255.4 bits (651), Expect = 2.6e-68 Identity = 121/169 (71.60%), Postives = 145/169 (85.80%), Query Frame = 0
BLAST of Carg07233 vs. TAIR10
Match: AT4G11600.1 (glutathione peroxidase 6) HSP 1 Score: 229.2 bits (583), Expect = 2.0e-60 Identity = 106/171 (61.99%), Postives = 134/171 (78.36%), Query Frame = 0
BLAST of Carg07233 vs. TAIR10
Match: AT4G31870.1 (glutathione peroxidase 7) HSP 1 Score: 225.3 bits (573), Expect = 2.9e-59 Identity = 100/164 (60.98%), Postives = 130/164 (79.27%), Query Frame = 0
BLAST of Carg07233 vs. TAIR10
Match: AT2G25080.1 (glutathione peroxidase 1) HSP 1 Score: 224.9 bits (572), Expect = 3.8e-59 Identity = 98/164 (59.76%), Postives = 129/164 (78.66%), Query Frame = 0
BLAST of Carg07233 vs. Swiss-Prot
Match: sp|Q8L910|GPX4_ARATH (Probable glutathione peroxidase 4 OS=Arabidopsis thaliana OX=3702 GN=GPX4 PE=2 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 1.2e-70 Identity = 123/167 (73.65%), Postives = 146/167 (87.43%), Query Frame = 0
BLAST of Carg07233 vs. Swiss-Prot
Match: sp|Q9LYB4|GPX5_ARATH (Probable glutathione peroxidase 5 OS=Arabidopsis thaliana OX=3702 GN=GPX5 PE=1 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 4.8e-67 Identity = 121/169 (71.60%), Postives = 145/169 (85.80%), Query Frame = 0
BLAST of Carg07233 vs. Swiss-Prot
Match: sp|P30708|GPX4_NICSY (Probable phospholipid hydroperoxide glutathione peroxidase OS=Nicotiana sylvestris OX=4096 PE=2 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 2.5e-60 Identity = 107/168 (63.69%), Postives = 133/168 (79.17%), Query Frame = 0
BLAST of Carg07233 vs. Swiss-Prot
Match: sp|Q9FXS3|GPX4_TOBAC (Probable phospholipid hydroperoxide glutathione peroxidase OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 4.3e-60 Identity = 106/168 (63.10%), Postives = 133/168 (79.17%), Query Frame = 0
BLAST of Carg07233 vs. Swiss-Prot
Match: sp|O23814|GPX4_SPIOL (Probable phospholipid hydroperoxide glutathione peroxidase OS=Spinacia oleracea OX=3562 PE=2 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 9.6e-60 Identity = 103/171 (60.23%), Postives = 134/171 (78.36%), Query Frame = 0
BLAST of Carg07233 vs. TrEMBL
Match: tr|A0A0A0K5U8|A0A0A0K5U8_CUCSA (Glutathione peroxidase OS=Cucumis sativus OX=3659 GN=Csa_7G392410 PE=3 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 1.4e-84 Identity = 151/174 (86.78%), Postives = 164/174 (94.25%), Query Frame = 0
BLAST of Carg07233 vs. TrEMBL
Match: tr|A0A1S3BT48|A0A1S3BT48_CUCME (Glutathione peroxidase OS=Cucumis melo OX=3656 GN=LOC103492878 PE=3 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 1.9e-84 Identity = 152/170 (89.41%), Postives = 161/170 (94.71%), Query Frame = 0
BLAST of Carg07233 vs. TrEMBL
Match: tr|A0A2P5BVP1|A0A2P5BVP1_9ROSA (Glutathione peroxidase OS=Trema orientalis OX=63057 GN=TorRG33x02_306940 PE=3 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 2.1e-75 Identity = 136/168 (80.95%), Postives = 152/168 (90.48%), Query Frame = 0
BLAST of Carg07233 vs. TrEMBL
Match: tr|A0A2P5CXR0|A0A2P5CXR0_PARAD (Glutathione peroxidase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_115180 PE=3 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 3.5e-75 Identity = 136/168 (80.95%), Postives = 152/168 (90.48%), Query Frame = 0
BLAST of Carg07233 vs. TrEMBL
Match: tr|D7TPC9|D7TPC9_VITVI (Glutathione peroxidase OS=Vitis vinifera OX=29760 GN=VIT_07s0104g00320 PE=3 SV=1) HSP 1 Score: 288.1 bits (736), Expect = 1.3e-74 Identity = 136/168 (80.95%), Postives = 151/168 (89.88%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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