Carg07233-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07233-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Glutathione peroxidase
Location	Cucurbita_argyrosperma_scaffold_017 : 817597 .. 820949 (+)
Sequence length	1130

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACGTTTACTCAATTCAGCTCCCCATTAAGCAATAAGCAATTAGGTCACAAACCAGTTGGGAATCCATTGGGACCCATTAACGGATCGATTCGAAACGAAATCCTTATTGAGCGATCGAAGTCCTTTCCTTGATCTTTTCTCTTCTTCCTTTTCAAGTTCATTGATCGCGATCGCCGAAGAGGAGCAAAAAGATGGGGGCATCTCACTCAGTGGCAGAGAAATCCATCCATGAATTCACAGTCAAGGTTTTAACCTCCCTTCCCCACCCCCCCACTACTCCATATCTCTCTTTTTTGCCTTTTTTCTGTCTCGATCTGTGCTTCGTCTCTTTCCTCAGAGGGGGACCTCCATTCTTTTAGAGCATCTTTTTTCTTAATGAGATCGTGCTGGTGGAGCGCAGGATTTCAAAGGCAAGGACGTAAACCTCAATGACTATAAGGGGAAGATCCTTCTTGTGGTTAACGTTGCGTCTAAATGGTTTGTTTGTCGCCTTCTTTTGTGGATTCTTTCTCTGTGGGTCTCCCATGTTTGGCTTAATTACTGAGTATTGTACTTCCTGTGTCTGTTTTCGCATCTGAACAGTGGGTTTACAGATTTGAATTACAAGCAGTTGACTGAACTGTACAACCGATACAAGGATGAAGGTTTCGTTTCCCCCTTTTTGAGTTATTCATTTATTATTTAATCAACTGTGAGCCCGTTTATCATCAACAGTTCATAGCTTTTCCTGCTGCTTGATAAACTGAATTCAATTAAATTGCATATATAATTAGTGTCCATAATTGCTTTCTTCTGCATAGTACTGGGCCTCATTCTTTAGGTGCTACAAGATCTCGTACATTGGAACCTATGGTTATGAAACTGAATTCATTAGTATGGAACATTTTCTTTTCCAAGTGAAATCCCCTGGTACATGAAAGAGTGCTTTCATTGTTAGTGGAATAAAAAGCGTTTGTATTTTAATGCATTAGAAAAAGAAGAAAAATATCGAAGTATGATGAGCAAGGATTTTGTGAACCACACTAACCATTTAAAAGAAATCAAAGAGAGAAGTTATAAATCTTAAAACAAGGAATCTACCGGGGCCCTATAGTTGTAGGGCGTGTCTGAGCCCTGTCCTGAGAAAAGACGGGCCTTATTCCACAGACACTCCTCTCGCAAGAAACAACAACTTCATGTGCAGTTATGCTTTCTCACGAATGGTCTGCTCATTGAAAGGAACTGTGAAAGAATAATTTTGCTAGATGGGAGAGAAGGAAACGAGGAAGATATTTTTTTCATTTTTGGAGACAAAAGCTTTCTACAAAGTCCATTCCCTGTTTTTCTCTGTAGTTTTTCAAAAAGGTGTTCTGTGTGGGTTGGTATTTGTTTTTCCATTCTGCCCTGTTCACTGTGGAAGATTCAAAATTAGAACACCTTGAACTACCAAAGGGCTATAGAGAATGAGTCGAAGCCATGGACCCCTACTTAGAATTTAATATTTTACGAGTTTCTTTGGCAACTAAATATATTAGGGTTAGATGGTTGCCCCATGAGAATAGTCGACGAGCTGCCTTCAAGCAGGCCAGACACTCATGGAGAATATATGTATATAAACTGCTCTGTAAACACGTCTAGTTGTAAAAGGAAAGCGGTTTTGACTTCTTCACTCTGTTATTGAATTGTAAGAATAAAAAGAAGGTCACAAATTATATGATATATGTATATATATCCCTGATGTTTTTCTTGGCTGATCCTTAGTGCATTTTCTTTGCAACCTCGGTAATGGTATTGAAGCATTCTGTATCTTCTTTGGTTATTAGTTGTTTCTTTTATTTGGTTCTTACACTATAGATTTACTGTCCTCAGACTTTGAAATACTGGCATTTCCATGCAATCAGTTTCTGAAGCAAGAGCCCGGAACAAGTGAGGTGGCTCAAGAATTTGCTTGTACAAGGTACAAAGCAGAATATCCAATCTTCCAAAAGGTAATGATGCTTTTCTAATAAACCTTGTTTTTGACTTTCACTGAAGGTTAAGAATCATATTCTGATTATGTGCCATTAACTCAGTTATATTCAAATATCTGAACTGTGAATTTTTGTCCTTATGTTGTCTATGAAGATTTTGGATACATTATGATAGAAGTTTCACCATTTGCTGAATTTGATGCATTGTTATTTGAGCAGCTTCTTGAAGTTCCTATGATTTAAACTATCACAATAGATAGAACTCATGCGGGGTACGAACGATAGAATTTTTTAAACTTTTAAAAGGCATATTAATTTGCTCCTTAAGTTTGTTAGGAGTAGGATCACGATATCAAATTTGTTCTCTTTTTCTTCTAGTTTGTTCTCTCACTCGAGCTTTAAAATGTTGAAATTGACCGAAATGTTGAGGTCCCAATATTATGAAAATGTTGATGGAAATATCAATAAAATGTTGATATCGATAGAAATTTCTGAAAAATTCCACAAAACAAAAAAAAAATTAAATTAATCAATTAACATTCTTAAACTTCTTATATAATTTAAAATGCTTACTATTTGTATTACTTTCACATTAGTGACATTTTGTGGCTTCTTAGTTATGTTTCATCAACTTTTTTACAGTTCAATCAATTTGTTTTTTTTTTTTGGGTCACGCAGATACGTGTGAACGGGCCAGACGCGGCGCCAGTCTACAAGTTCCTCAAAGCAACTAGCAATGGGTTCTTAGGCACCCGGATAAAGTGGAATTTCACCAAGTTCTTGGTAGATAAGGAAGGGGTTGTCATCAACCGCTATGGCCCGTCCACCACTCCATTGTCTATTGAGGTACGTTGTCCTAAGCAGCCCCATGAAACTCATTTCCTTGATAATGAAACTGCTTTGTTGTTGATCGTAGCATTGTTTTTTTTCCAATTACTGTCTCAGAGTGACATAAAAAAAGCATTGGGAATTGCTCGACTTACCTCTAGACCTCATGCTTAATGTAAGTCCACATGAGTTAAAGTAATTGAAGACACTAATAGAATATAACCAAATGGTAAAGGTGTATTCTCCCTTGGCTGTAATTATTGTATTAGCAGTAATAGTCCAACGGGTCTGTCTGTGTGCGTGCGGGCGTGCGCGCGTGCGTGTTTCTTCTTGTATTTCGAGGGAATGTAAGTAGTGGCTATTCTTTGTGTTGTGTAGTATTTTTGGAGGCTGTTATTTGGATATGTTTATTTGTTTGATTTGTATTAGGAAGTGCATTATGGATGGCTAAGTTATCTTCATAAACGTTGTTTTGCTAGTTTGATCATGCAAAGTTGTTTATGACGAATATCGAACGGGAAGCGTAGATTGTTTTAGAAGTAATTTATACATTTCTATATGTGAAATAAATGTA

mRNA sequence

AAACGTTTACTCAATTCAGCTCCCCATTAAGCAATAAGCAATTAGGTCACAAACCAGTTGGGAATCCATTGGGACCCATTAACGGATCGATTCGAAACGAAATCCTTATTGAGCGATCGAAGTCCTTTCCTTGATCTTTTCTCTTCTTCCTTTTCAAGTTCATTGATCGCGATCGCCGAAGAGGAGCAAAAAGATGGGGGCATCTCACTCAGTGGCAGAGAAATCCATCCATGAATTCACAGTCAAGGATTTCAAAGGCAAGGACGTAAACCTCAATGACTATAAGGGGAAGATCCTTCTTGTGGTTAACGTTGCGTCTAAATGTGGGTTTACAGATTTGAATTACAAGCAGTTGACTGAACTGTACAACCGATACAAGGATGAAGACTTTGAAATACTGGCATTTCCATGCAATCAGTTTCTGAAGCAAGAGCCCGGAACAAGTGAGGTGGCTCAAGAATTTGCTTGTACAAGGTACAAAGCAGAATATCCAATCTTCCAAAAGATACGTGTGAACGGGCCAGACGCGGCGCCAGTCTACAAGTTCCTCAAAGCAACTAGCAATGGGTTCTTAGGCACCCGGATAAAGTGGAATTTCACCAAGTTCTTGGTAGATAAGGAAGGGGTTGTCATCAACCGCTATGGCCCGTCCACCACTCCATTGTCTATTGAGAGTGACATAAAAAAAGCATTGGGAATTGCTCGACTTACCTCTAGACCTCATGCTTAATGTAAGTCCACATGAGTTAAAGTAATTGAAGACACTAATAGAATATAACCAAATGGTAAAGGTGTATTCTCCCTTGGCTGTAATTATTGTATTAGCAGTAATAGTCCAACGGGTCTGTCTGTGTGCGTGCGGGCGTGCGCGCGTGCGTGTTTCTTCTTGTATTTCGAGGGAATGTAAGTAGTGGCTATTCTTTGTGTTGTGTAGTATTTTTGGAGGCTGTTATTTGGATATGTTTATTTGTTTGATTTGTATTAGGAAGTGCATTATGGATGGCTAAGTTATCTTCATAAACGTTGTTTTGCTAGTTTGATCATGCAAAGTTGTTTATGACGAATATCGAACGGGAAGCGTAGATTGTTTTAGAAGTAATTTATACATTTCTATATGTGAAATAAATGTA

Coding sequence (CDS)

ATGGGGGCATCTCACTCAGTGGCAGAGAAATCCATCCATGAATTCACAGTCAAGGATTTCAAAGGCAAGGACGTAAACCTCAATGACTATAAGGGGAAGATCCTTCTTGTGGTTAACGTTGCGTCTAAATGTGGGTTTACAGATTTGAATTACAAGCAGTTGACTGAACTGTACAACCGATACAAGGATGAAGACTTTGAAATACTGGCATTTCCATGCAATCAGTTTCTGAAGCAAGAGCCCGGAACAAGTGAGGTGGCTCAAGAATTTGCTTGTACAAGGTACAAAGCAGAATATCCAATCTTCCAAAAGATACGTGTGAACGGGCCAGACGCGGCGCCAGTCTACAAGTTCCTCAAAGCAACTAGCAATGGGTTCTTAGGCACCCGGATAAAGTGGAATTTCACCAAGTTCTTGGTAGATAAGGAAGGGGTTGTCATCAACCGCTATGGCCCGTCCACCACTCCATTGTCTATTGAGAGTGACATAAAAAAAGCATTGGGAATTGCTCGACTTACCTCTAGACCTCATGCTTAA

Protein sequence

MGASHSVAEKSIHEFTVKDFKGKDVNLNDYKGKILLVVNVASKCGFTDLNYKQLTELYNRYKDEDFEILAFPCNQFLKQEPGTSEVAQEFACTRYKAEYPIFQKIRVNGPDAAPVYKFLKATSNGFLGTRIKWNFTKFLVDKEGVVINRYGPSTTPLSIESDIKKALGIARLTSRPHA

Homology

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BLAST of Carg07233-RA vs. NCBI nr
Match: XP_022953907.1 (protein HUA2-LIKE 2-like [Cucurbita moschata])

HSP 1 Score: 364.0 bits (933), Expect = 2.9e-97
Identity = 176/178 (98.88%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 1    MGASHSVAEKSIHEFTVKDFKGKDVNLNDYKGKILLVVNVASKCGFTDLNYKQLTELYNR 60
            MGASHSVAEKSIHEFTVKDFKGKDVNLNDYKGKILLVVNVASKCGFTDLNYKQLTELYNR
Sbjct: 1454 MGASHSVAEKSIHEFTVKDFKGKDVNLNDYKGKILLVVNVASKCGFTDLNYKQLTELYNR 1513

Query: 61   YKDEDFEILAFPCNQFLKQEPGTSEVAQEFACTRYKAEYPIFQKIRVNGPDAAPVYKFLK 120
            YKDEDFEILAFPCNQFLKQEPGTSE AQEFACTRYKAEYPIFQKIRVNGPDAAPVYKFLK
Sbjct: 1514 YKDEDFEILAFPCNQFLKQEPGTSEAAQEFACTRYKAEYPIFQKIRVNGPDAAPVYKFLK 1573

Query: 121  ATSNGFLGTRIKWNFTKFLVDKEGVVINRYGPSTTPLSIESDIKKALGIARLTSRPHA 179
            ATSNGFLGTRIKWNFTKFLVDKEGVVINRYGPSTTPLSIESDIKKALGI+RLTSRPHA
Sbjct: 1574 ATSNGFLGTRIKWNFTKFLVDKEGVVINRYGPSTTPLSIESDIKKALGISRLTSRPHA 1631

[Close]

BLAST of Carg07233-RA vs. NCBI nr
Match: XP_023549407.1 (protein HUA2-LIKE 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 347.1 bits (889), Expect = 3.7e-92
Identity = 167/170 (98.24%), Postives = 168/170 (98.82%), Query Frame = 0


Query: 1    MGASHSVAEKSIHEFTVKDFKGKDVNLNDYKGKILLVVNVASKCGFTDLNYKQLTELYNR 60
            MGASHSVAEKSIHEFTVKDFKGKDVNLNDYKGKILLVVNVASKCGFTDLNYKQLTELYNR
Sbjct: 1454 MGASHSVAEKSIHEFTVKDFKGKDVNLNDYKGKILLVVNVASKCGFTDLNYKQLTELYNR 1513

Query: 61   YKDEDFEILAFPCNQFLKQEPGTSEVAQEFACTRYKAEYPIFQKIRVNGPDAAPVYKFLK 120
            YKDEDFEILAFPCNQFLKQEPGTSE AQEFACTRYKAEYPIFQKIRVNGPD APVYKFLK
Sbjct: 1514 YKDEDFEILAFPCNQFLKQEPGTSETAQEFACTRYKAEYPIFQKIRVNGPDTAPVYKFLK 1573

Query: 121  ATSNGFLGTRIKWNFTKFLVDKEGVVINRYGPSTTPLSIESDIKKALGIA 171
            ATSNGFLGTRIKWNFTKFLVDKEGVVINRYGPSTTPLSIESDIKKALG+A
Sbjct: 1574 ATSNGFLGTRIKWNFTKFLVDKEGVVINRYGPSTTPLSIESDIKKALGVA 1623

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BLAST of Carg07233-RA vs. NCBI nr
Match: XP_022991770.1 (protein HUA2-LIKE 2-like [Cucurbita maxima])

HSP 1 Score: 337.8 bits (865), Expect = 2.2e-89
Identity = 163/170 (95.88%), Postives = 165/170 (97.06%), Query Frame = 0


Query: 1    MGASHSVAEKSIHEFTVKDFKGKDVNLNDYKGKILLVVNVASKCGFTDLNYKQLTELYNR 60
            MGASHSVAEKSIHEFTVKDFKGKDVNLNDYKGKILLVVNVASKCGFTD NYKQLTELYNR
Sbjct: 1458 MGASHSVAEKSIHEFTVKDFKGKDVNLNDYKGKILLVVNVASKCGFTDSNYKQLTELYNR 1517

Query: 61   YKDEDFEILAFPCNQFLKQEPGTSEVAQEFACTRYKAEYPIFQKIRVNGPDAAPVYKFLK 120
            YKDEDFEILAFPCNQFLKQEPGTSE AQEFACTRYKAEYPIFQKIRVNGPD APVYKFLK
Sbjct: 1518 YKDEDFEILAFPCNQFLKQEPGTSEAAQEFACTRYKAEYPIFQKIRVNGPDTAPVYKFLK 1577

Query: 121  ATSNGFLGTRIKWNFTKFLVDKEGVVINRYGPSTTPLSIESDIKKALGIA 171
            ATS GFLGTRIKWNFTKFLVDKEGVVI RYGPST+PLSIESDIKKALG+A
Sbjct: 1578 ATSMGFLGTRIKWNFTKFLVDKEGVVIGRYGPSTSPLSIESDIKKALGVA 1627

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BLAST of Carg07233-RA vs. NCBI nr
Match: KGN44868.1 (hypothetical protein Csa_7G392410 [Cucumis sativus])

HSP 1 Score: 321.2 bits (822), Expect = 2.2e-84
Identity = 151/174 (86.78%), Postives = 164/174 (94.25%), Query Frame = 0


Query: 1   MGASHSVAEKSIHEFTVKDFKGKDVNLNDYKGKILLVVNVASKCGFTDLNYKQLTELYNR 60
           MG+S SV EKSIHEFTVKDF+GKDVNLN YKGK+LLVVNVASKCG TD NYKQLT+LYNR
Sbjct: 1   MGSSQSVTEKSIHEFTVKDFRGKDVNLNVYKGKVLLVVNVASKCGLTDSNYKQLTDLYNR 60

Query: 61  YKDEDFEILAFPCNQFLKQEPGTSEVAQEFACTRYKAEYPIFQKIRVNGPDAAPVYKFLK 120
           YKD+DFEILAFPCNQFLKQEPGTSE AQEFACTRYKAEYPIFQK+RVNGPDA PVYKFLK
Sbjct: 61  YKDQDFEILAFPCNQFLKQEPGTSEDAQEFACTRYKAEYPIFQKVRVNGPDAVPVYKFLK 120

Query: 121 ATSNGFLGTRIKWNFTKFLVDKEGVVINRYGPSTTPLSIESDIKKALGIARLTS 175
           ATSNGF+G+RIKWNFTKFL+DKEGVVINRYGP+T PL+IE DIKKALGIA +T+
Sbjct: 121 ATSNGFIGSRIKWNFTKFLIDKEGVVINRYGPTTNPLAIEVDIKKALGIASVTA 174

[Close]

BLAST of Carg07233-RA vs. NCBI nr
Match: XP_011659332.1 (PREDICTED: HUA2-like protein 3 isoform X2 [Cucumis sativus])

HSP 1 Score: 321.2 bits (822), Expect = 2.2e-84
Identity = 151/174 (86.78%), Postives = 164/174 (94.25%), Query Frame = 0


Query: 1    MGASHSVAEKSIHEFTVKDFKGKDVNLNDYKGKILLVVNVASKCGFTDLNYKQLTELYNR 60
            MG+S SV EKSIHEFTVKDF+GKDVNLN YKGK+LLVVNVASKCG TD NYKQLT+LYNR
Sbjct: 1427 MGSSQSVTEKSIHEFTVKDFRGKDVNLNVYKGKVLLVVNVASKCGLTDSNYKQLTDLYNR 1486

Query: 61   YKDEDFEILAFPCNQFLKQEPGTSEVAQEFACTRYKAEYPIFQKIRVNGPDAAPVYKFLK 120
            YKD+DFEILAFPCNQFLKQEPGTSE AQEFACTRYKAEYPIFQK+RVNGPDA PVYKFLK
Sbjct: 1487 YKDQDFEILAFPCNQFLKQEPGTSEDAQEFACTRYKAEYPIFQKVRVNGPDAVPVYKFLK 1546

Query: 121  ATSNGFLGTRIKWNFTKFLVDKEGVVINRYGPSTTPLSIESDIKKALGIARLTS 175
            ATSNGF+G+RIKWNFTKFL+DKEGVVINRYGP+T PL+IE DIKKALGIA +T+
Sbjct: 1547 ATSNGFIGSRIKWNFTKFLIDKEGVVINRYGPTTNPLAIEVDIKKALGIASVTA 1600

[Close]

BLAST of Carg07233-RA vs. TAIR10
Match: AT2G48150.1 (glutathione peroxidase 4)

HSP 1 Score: 267.3 bits (682), Expect = 6.7e-72
Identity = 123/167 (73.65%), Postives = 146/167 (87.43%), Query Frame = 0


Query: 1   MGASHSVAEKSIHEFTVKDFKGKDVNLNDYKGKILLVVNVASKCGFTDLNYKQLTELYNR 60
           MGAS SV E+S+H+FTVKD  GKD+N++ Y+GK+LL+VNVASKCGFT+ NY QLTELY +
Sbjct: 1   MGASASVPERSVHQFTVKDSSGKDLNMSIYQGKVLLIVNVASKCGFTETNYTQLTELYRK 60

Query: 61  YKDEDFEILAFPCNQFLKQEPGTSEVAQEFACTRYKAEYPIFQKIRVNGPDAAPVYKFLK 120
           YKD+DFEILAFPCNQFL QEPGTS+ A EFAC R+KAEYP+FQK+RVNG +AAP+YKFLK
Sbjct: 61  YKDQDFEILAFPCNQFLYQEPGTSQEAHEFACERFKAEYPVFQKVRVNGQNAAPIYKFLK 120

Query: 121 ATSNGFLGTRIKWNFTKFLVDKEGVVINRYGPSTTPLSIESDIKKAL 168
           A+   FLG+RIKWNFTKFLV K+G+VI+RYG   TPLSIE DIKKAL
Sbjct: 121 ASKPTFLGSRIKWNFTKFLVGKDGLVIDRYGTMVTPLSIEKDIKKAL 167

[Close]

BLAST of Carg07233-RA vs. TAIR10
Match: AT3G63080.1 (glutathione peroxidase 5)

HSP 1 Score: 255.4 bits (651), Expect = 2.6e-68
Identity = 121/169 (71.60%), Postives = 145/169 (85.80%), Query Frame = 0


Query: 1   MGA--SHSVAEKSIHEFTVKDFKGKDVNLNDYKGKILLVVNVASKCGFTDLNYKQLTELY 60
           MGA  S SV+EKSIH+FTVKD  GK+V+L+ Y+GK+LLVVNVASKCGFT+ NY QLTELY
Sbjct: 1   MGASSSSSVSEKSIHQFTVKDSSGKEVDLSVYQGKVLLVVNVASKCGFTESNYTQLTELY 60

Query: 61  NRYKDEDFEILAFPCNQFLKQEPGTSEVAQEFACTRYKAEYPIFQKIRVNGPDAAPVYKF 120
            +YKD+ F +LAFPCNQFL QEPGTSE A +FACTR+KAEYP+FQK+RVNG +AAPVYKF
Sbjct: 61  RKYKDQGFVVLAFPCNQFLSQEPGTSEEAHQFACTRFKAEYPVFQKVRVNGQNAAPVYKF 120

Query: 121 LKATSNGFLGTRIKWNFTKFLVDKEGVVINRYGPSTTPLSIESDIKKAL 168
           LK+    FLG+RIKWNFTKFLV K+G VI+RYG + +PLSI+ DI+KAL
Sbjct: 121 LKSKKPSFLGSRIKWNFTKFLVGKDGQVIDRYGTTVSPLSIQKDIEKAL 169

[Close]

BLAST of Carg07233-RA vs. TAIR10
Match: AT4G11600.1 (glutathione peroxidase 6)

HSP 1 Score: 229.2 bits (583), Expect = 2.0e-60
Identity = 106/171 (61.99%), Postives = 134/171 (78.36%), Query Frame = 0


Query: 3   ASHSVA----EKSIHEFTVKDFKGKDVNLNDYKGKILLVVNVASKCGFTDLNYKQLTELY 62
           + HS+A     KS+++FTVKD KG DV+L+ YKGK+LL+VNVAS+CG T+ NY +L +LY
Sbjct: 60  SEHSMAASSEPKSLYDFTVKDAKGNDVDLSIYKGKVLLIVNVASQCGLTNSNYTELAQLY 119

Query: 63  NRYKDEDFEILAFPCNQFLKQEPGTSEVAQEFACTRYKAEYPIFQKIRVNGPDAAPVYKF 122
            +YK   FEILAFPCNQF  QEPGT+E   +FACTR+KAEYPIF K+ VNG  AAPVYKF
Sbjct: 120 EKYKGHGFEILAFPCNQFGNQEPGTNEEIVQFACTRFKAEYPIFDKVDVNGDKAAPVYKF 179

Query: 123 LKATSNGFLGTRIKWNFTKFLVDKEGVVINRYGPSTTPLSIESDIKKALGI 170
           LK++  G  G  IKWNF KFLVDK+G V++R+ P+T+PLSIE D+KK LG+
Sbjct: 180 LKSSKGGLFGDGIKWNFAKFLVDKDGNVVDRFAPTTSPLSIEKDVKKLLGV 230

[Close]

BLAST of Carg07233-RA vs. TAIR10
Match: AT4G31870.1 (glutathione peroxidase 7)

HSP 1 Score: 225.3 bits (573), Expect = 2.9e-59
Identity = 100/164 (60.98%), Postives = 130/164 (79.27%), Query Frame = 0


Query: 4   SHSVAEKSIHEFTVKDFKGKDVNLNDYKGKILLVVNVASKCGFTDLNYKQLTELYNRYKD 63
           + + AEKS+H+FTVKD  G DV+L+ +KGK LL+VNVAS+CG T  NY +L++LY +YK+
Sbjct: 68  ARAAAEKSVHDFTVKDIDGNDVSLDKFKGKPLLIVNVASRCGLTSSNYSELSQLYEKYKN 127

Query: 64  EDFEILAFPCNQFLKQEPGTSEVAQEFACTRYKAEYPIFQKIRVNGPDAAPVYKFLKATS 123
           + FEILAFPCNQF  QEPG++   ++FACTR+KAE+PIF K+ VNGP  AP+YKFLK+ +
Sbjct: 128 QGFEILAFPCNQFGGQEPGSNPEIKQFACTRFKAEFPIFDKVDVNGPSTAPIYKFLKSNA 187

Query: 124 NGFLGTRIKWNFTKFLVDKEGVVINRYGPSTTPLSIESDIKKAL 168
            GFLG  IKWNF KFLVDK+G V+ RY P+T+P  IE DI+K L
Sbjct: 188 GGFLGDIIKWNFEKFLVDKKGKVVERYPPTTSPFQIEKDIQKLL 231

[Close]

BLAST of Carg07233-RA vs. TAIR10
Match: AT2G25080.1 (glutathione peroxidase 1)

HSP 1 Score: 224.9 bits (572), Expect = 3.8e-59
Identity = 98/164 (59.76%), Postives = 129/164 (78.66%), Query Frame = 0


Query: 4   SHSVAEKSIHEFTVKDFKGKDVNLNDYKGKILLVVNVASKCGFTDLNYKQLTELYNRYKD 63
           + + AEK++H+FTVKD  GKDV LN +KGK++L+VNVAS+CG T  NY +L+ LY +YK 
Sbjct: 71  ARAAAEKTVHDFTVKDIDGKDVALNKFKGKVMLIVNVASRCGLTSSNYSELSHLYEKYKT 130

Query: 64  EDFEILAFPCNQFLKQEPGTSEVAQEFACTRYKAEYPIFQKIRVNGPDAAPVYKFLKATS 123
           + FEILAFPCNQF  QEPG++   ++FACTR+KAE+PIF K+ VNGP  AP+Y+FLK+ +
Sbjct: 131 QGFEILAFPCNQFGFQEPGSNSEIKQFACTRFKAEFPIFDKVDVNGPSTAPIYEFLKSNA 190

Query: 124 NGFLGTRIKWNFTKFLVDKEGVVINRYGPSTTPLSIESDIKKAL 168
            GFLG  IKWNF KFL+DK+G V+ RY P+T+P  IE DI+K L
Sbjct: 191 GGFLGGLIKWNFEKFLIDKKGKVVERYPPTTSPFQIEKDIQKLL 234

[Close]

BLAST of Carg07233-RA vs. Swiss-Prot
Match: sp|Q8L910|GPX4_ARATH (Probable glutathione peroxidase 4 OS=Arabidopsis thaliana OX=3702 GN=GPX4 PE=2 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.2e-70
Identity = 123/167 (73.65%), Postives = 146/167 (87.43%), Query Frame = 0


Query: 1   MGASHSVAEKSIHEFTVKDFKGKDVNLNDYKGKILLVVNVASKCGFTDLNYKQLTELYNR 60
           MGAS SV E+S+H+FTVKD  GKD+N++ Y+GK+LL+VNVASKCGFT+ NY QLTELY +
Sbjct: 1   MGASASVPERSVHQFTVKDSSGKDLNMSIYQGKVLLIVNVASKCGFTETNYTQLTELYRK 60

Query: 61  YKDEDFEILAFPCNQFLKQEPGTSEVAQEFACTRYKAEYPIFQKIRVNGPDAAPVYKFLK 120
           YKD+DFEILAFPCNQFL QEPGTS+ A EFAC R+KAEYP+FQK+RVNG +AAP+YKFLK
Sbjct: 61  YKDQDFEILAFPCNQFLYQEPGTSQEAHEFACERFKAEYPVFQKVRVNGQNAAPIYKFLK 120

Query: 121 ATSNGFLGTRIKWNFTKFLVDKEGVVINRYGPSTTPLSIESDIKKAL 168
           A+   FLG+RIKWNFTKFLV K+G+VI+RYG   TPLSIE DIKKAL
Sbjct: 121 ASKPTFLGSRIKWNFTKFLVGKDGLVIDRYGTMVTPLSIEKDIKKAL 167

[Close]

BLAST of Carg07233-RA vs. Swiss-Prot
Match: sp|Q9LYB4|GPX5_ARATH (Probable glutathione peroxidase 5 OS=Arabidopsis thaliana OX=3702 GN=GPX5 PE=1 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 4.8e-67
Identity = 121/169 (71.60%), Postives = 145/169 (85.80%), Query Frame = 0


Query: 1   MGA--SHSVAEKSIHEFTVKDFKGKDVNLNDYKGKILLVVNVASKCGFTDLNYKQLTELY 60
           MGA  S SV+EKSIH+FTVKD  GK+V+L+ Y+GK+LLVVNVASKCGFT+ NY QLTELY
Sbjct: 1   MGASSSSSVSEKSIHQFTVKDSSGKEVDLSVYQGKVLLVVNVASKCGFTESNYTQLTELY 60

Query: 61  NRYKDEDFEILAFPCNQFLKQEPGTSEVAQEFACTRYKAEYPIFQKIRVNGPDAAPVYKF 120
            +YKD+ F +LAFPCNQFL QEPGTSE A +FACTR+KAEYP+FQK+RVNG +AAPVYKF
Sbjct: 61  RKYKDQGFVVLAFPCNQFLSQEPGTSEEAHQFACTRFKAEYPVFQKVRVNGQNAAPVYKF 120

Query: 121 LKATSNGFLGTRIKWNFTKFLVDKEGVVINRYGPSTTPLSIESDIKKAL 168
           LK+    FLG+RIKWNFTKFLV K+G VI+RYG + +PLSI+ DI+KAL
Sbjct: 121 LKSKKPSFLGSRIKWNFTKFLVGKDGQVIDRYGTTVSPLSIQKDIEKAL 169

[Close]

BLAST of Carg07233-RA vs. Swiss-Prot
Match: sp|P30708|GPX4_NICSY (Probable phospholipid hydroperoxide glutathione peroxidase OS=Nicotiana sylvestris OX=4096 PE=2 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 2.5e-60
Identity = 107/168 (63.69%), Postives = 133/168 (79.17%), Query Frame = 0


Query: 3   ASHSVAEKSIHEFTVKDFKGKDVNLNDYKGKILLVVNVASKCGFTDLNYKQLTELYNRYK 62
           AS S   +SI++FTVKD KG DV+L+ YKGK+L++VNVAS+CG T+ NY  LTE+Y +YK
Sbjct: 2   ASQSSKPQSIYDFTVKDAKGNDVDLSIYKGKVLIIVNVASQCGLTNSNYTDLTEIYKKYK 61

Query: 63  DEDFEILAFPCNQFLKQEPGTSEVAQEFACTRYKAEYPIFQKIRVNGPDAAPVYKFLKAT 122
           D+  EILAFPCNQF  QEPG+ E  Q   CTR+KAEYPIF K+ VNG +AAP+YKFLK++
Sbjct: 62  DQGLEILAFPCNQFGGQEPGSIEEIQNMVCTRFKAEYPIFDKVDVNGDNAAPLYKFLKSS 121

Query: 123 SNGFLGTRIKWNFTKFLVDKEGVVINRYGPSTTPLSIESDIKKALGIA 171
             GF G  IKWNF+KFLVDKEG V++RY P+TTP S+E DIKK LG+A
Sbjct: 122 KGGFFGDSIKWNFSKFLVDKEGNVVDRYSPTTTPASMEKDIKKLLGVA 169

[Close]

BLAST of Carg07233-RA vs. Swiss-Prot
Match: sp|Q9FXS3|GPX4_TOBAC (Probable phospholipid hydroperoxide glutathione peroxidase OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 4.3e-60
Identity = 106/168 (63.10%), Postives = 133/168 (79.17%), Query Frame = 0


Query: 3   ASHSVAEKSIHEFTVKDFKGKDVNLNDYKGKILLVVNVASKCGFTDLNYKQLTELYNRYK 62
           AS S   +SI++FTVKD KG DV+L+ YKGK+L++VNVAS+CG T+ NY  +TE+Y +YK
Sbjct: 2   ASQSSKPQSIYDFTVKDAKGNDVDLSIYKGKVLIIVNVASQCGLTNSNYTDMTEIYKKYK 61

Query: 63  DEDFEILAFPCNQFLKQEPGTSEVAQEFACTRYKAEYPIFQKIRVNGPDAAPVYKFLKAT 122
           D+  EILAFPCNQF  QEPG+ E  Q   CTR+KAEYPIF K+ VNG +AAP+YKFLK++
Sbjct: 62  DQGLEILAFPCNQFGGQEPGSIEEIQNMVCTRFKAEYPIFDKVDVNGDNAAPLYKFLKSS 121

Query: 123 SNGFLGTRIKWNFTKFLVDKEGVVINRYGPSTTPLSIESDIKKALGIA 171
             GF G  IKWNF+KFLVDKEG V++RY P+TTP S+E DIKK LG+A
Sbjct: 122 KGGFFGDSIKWNFSKFLVDKEGNVVDRYSPTTTPASMEKDIKKLLGVA 169

[Close]

BLAST of Carg07233-RA vs. Swiss-Prot
Match: sp|O23814|GPX4_SPIOL (Probable phospholipid hydroperoxide glutathione peroxidase OS=Spinacia oleracea OX=3562 PE=2 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 9.6e-60
Identity = 103/171 (60.23%), Postives = 134/171 (78.36%), Query Frame = 0


Query: 1   MGASHSVAEKSIHEFTVKDFKGKDVNLNDYKGKILLVVNVASKCGFTDLNYKQLTELYNR 60
           M +  S   KS+HEF V+D +G DV+L+ YKGK+LL+VNVAS+CG T+ NY ++TELY +
Sbjct: 1   MASDSSAQPKSVHEFVVRDARGNDVDLSIYKGKVLLIVNVASQCGLTNSNYTEMTELYEK 60

Query: 61  YKDEDFEILAFPCNQFLKQEPGTSEVAQEFACTRYKAEYPIFQKIRVNGPDAAPVYKFLK 120
           Y++   EILAFPCNQF  QEPG++E   EFACTR+KAEYPIF K+ VNG +AAP+YKFLK
Sbjct: 61  YRELGLEILAFPCNQFGNQEPGSNEEVLEFACTRFKAEYPIFDKVDVNGSNAAPIYKFLK 120

Query: 121 ATSNGFLGTRIKWNFTKFLVDKEGVVINRYGPSTTPLSIESDIKKALGIAR 172
           ++  G  G  +KWNFTKFLVDK+G V++RY P+T+P SIE D+KK LGI +
Sbjct: 121 SSKGGLFGDGLKWNFTKFLVDKDGNVVDRYAPTTSPKSIEKDVKKLLGIQK 171

[Close]

BLAST of Carg07233-RA vs. TrEMBL
Match: tr|A0A0A0K5U8|A0A0A0K5U8_CUCSA (Glutathione peroxidase OS=Cucumis sativus OX=3659 GN=Csa_7G392410 PE=3 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 1.4e-84
Identity = 151/174 (86.78%), Postives = 164/174 (94.25%), Query Frame = 0


Query: 1   MGASHSVAEKSIHEFTVKDFKGKDVNLNDYKGKILLVVNVASKCGFTDLNYKQLTELYNR 60
           MG+S SV EKSIHEFTVKDF+GKDVNLN YKGK+LLVVNVASKCG TD NYKQLT+LYNR
Sbjct: 1   MGSSQSVTEKSIHEFTVKDFRGKDVNLNVYKGKVLLVVNVASKCGLTDSNYKQLTDLYNR 60

Query: 61  YKDEDFEILAFPCNQFLKQEPGTSEVAQEFACTRYKAEYPIFQKIRVNGPDAAPVYKFLK 120
           YKD+DFEILAFPCNQFLKQEPGTSE AQEFACTRYKAEYPIFQK+RVNGPDA PVYKFLK
Sbjct: 61  YKDQDFEILAFPCNQFLKQEPGTSEDAQEFACTRYKAEYPIFQKVRVNGPDAVPVYKFLK 120

Query: 121 ATSNGFLGTRIKWNFTKFLVDKEGVVINRYGPSTTPLSIESDIKKALGIARLTS 175
           ATSNGF+G+RIKWNFTKFL+DKEGVVINRYGP+T PL+IE DIKKALGIA +T+
Sbjct: 121 ATSNGFIGSRIKWNFTKFLIDKEGVVINRYGPTTNPLAIEVDIKKALGIASVTA 174

[Close]

BLAST of Carg07233-RA vs. TrEMBL
Match: tr|A0A1S3BT48|A0A1S3BT48_CUCME (Glutathione peroxidase OS=Cucumis melo OX=3656 GN=LOC103492878 PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.9e-84
Identity = 152/170 (89.41%), Postives = 161/170 (94.71%), Query Frame = 0


Query: 1    MGASHSVAEKSIHEFTVKDFKGKDVNLNDYKGKILLVVNVASKCGFTDLNYKQLTELYNR 60
            MGAS SV+EKSIHEFTVKDF+GKDVNLN YKGK+LLVVNVASKCGFTD NY QLTELYNR
Sbjct: 1469 MGASQSVSEKSIHEFTVKDFRGKDVNLNVYKGKVLLVVNVASKCGFTDSNYTQLTELYNR 1528

Query: 61   YKDEDFEILAFPCNQFLKQEPGTSEVAQEFACTRYKAEYPIFQKIRVNGPDAAPVYKFLK 120
            YKD+DFEILAFPCNQFLKQEPGTSE AQEFACTRYKAEYPIFQK+RVNGPD  PVYKFLK
Sbjct: 1529 YKDQDFEILAFPCNQFLKQEPGTSEDAQEFACTRYKAEYPIFQKVRVNGPDTVPVYKFLK 1588

Query: 121  ATSNGFLGTRIKWNFTKFLVDKEGVVINRYGPSTTPLSIESDIKKALGIA 171
            ATSNGFLG+RIKWNFTKFLVDKEGVVINRYGP+T PL+IE D+KKALGIA
Sbjct: 1589 ATSNGFLGSRIKWNFTKFLVDKEGVVINRYGPTTNPLAIEVDVKKALGIA 1638

[Close]

BLAST of Carg07233-RA vs. TrEMBL
Match: tr|A0A2P5BVP1|A0A2P5BVP1_9ROSA (Glutathione peroxidase OS=Trema orientalis OX=63057 GN=TorRG33x02_306940 PE=3 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 2.1e-75
Identity = 136/168 (80.95%), Postives = 152/168 (90.48%), Query Frame = 0


Query: 1   MGASHSVAEKSIHEFTVKDFKGKDVNLNDYKGKILLVVNVASKCGFTDLNYKQLTELYNR 60
           MGA+ SV+EKSIHEFTVKD +GKDV L++YKGK+LL+VNVASKCGFTD NY QLTELYN+
Sbjct: 1   MGAAQSVSEKSIHEFTVKDARGKDVELSNYKGKVLLIVNVASKCGFTDSNYTQLTELYNK 60

Query: 61  YKDEDFEILAFPCNQFLKQEPGTSEVAQEFACTRYKAEYPIFQKIRVNGPDAAPVYKFLK 120
           YKD+  EILAFPCNQFLKQEPGTSE A++FACTRYKAEYPIFQK+RVNGPD APVYKFLK
Sbjct: 61  YKDKGLEILAFPCNQFLKQEPGTSEDAEKFACTRYKAEYPIFQKVRVNGPDTAPVYKFLK 120

Query: 121 ATSNGFLGTRIKWNFTKFLVDKEGVVINRYGPSTTPLSIESDIKKALG 169
           A  +GFLG+RIKWNFTKFLVDK+G VI RYG ST PL+IE DIKKALG
Sbjct: 121 ANKSGFLGSRIKWNFTKFLVDKDGQVIERYGTSTAPLAIEDDIKKALG 168

[Close]

BLAST of Carg07233-RA vs. TrEMBL
Match: tr|A0A2P5CXR0|A0A2P5CXR0_PARAD (Glutathione peroxidase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_115180 PE=3 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 3.5e-75
Identity = 136/168 (80.95%), Postives = 152/168 (90.48%), Query Frame = 0


Query: 1   MGASHSVAEKSIHEFTVKDFKGKDVNLNDYKGKILLVVNVASKCGFTDLNYKQLTELYNR 60
           MGA+ SV+EKSIHEFTVKD +GKDV L++YKGK+LL+VNVASKCGFTD NY QLTELYN+
Sbjct: 1   MGAAQSVSEKSIHEFTVKDARGKDVELSNYKGKVLLIVNVASKCGFTDSNYTQLTELYNK 60

Query: 61  YKDEDFEILAFPCNQFLKQEPGTSEVAQEFACTRYKAEYPIFQKIRVNGPDAAPVYKFLK 120
           YKD+  EILAFPCNQFLKQEPGTSE A++FACTRYKAEYPIFQK+RVNGPD APVYKFLK
Sbjct: 61  YKDKRLEILAFPCNQFLKQEPGTSEDAEKFACTRYKAEYPIFQKVRVNGPDTAPVYKFLK 120

Query: 121 ATSNGFLGTRIKWNFTKFLVDKEGVVINRYGPSTTPLSIESDIKKALG 169
           A  +GFLG+RIKWNFTKFLVDK+G VI RYG ST PL+IE DIKKALG
Sbjct: 121 ANKSGFLGSRIKWNFTKFLVDKDGRVIERYGTSTAPLAIEDDIKKALG 168

[Close]

BLAST of Carg07233-RA vs. TrEMBL
Match: tr|D7TPC9|D7TPC9_VITVI (Glutathione peroxidase OS=Vitis vinifera OX=29760 GN=VIT_07s0104g00320 PE=3 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.3e-74
Identity = 136/168 (80.95%), Postives = 151/168 (89.88%), Query Frame = 0


Query: 1   MGASHSVAEKSIHEFTVKDFKGKDVNLNDYKGKILLVVNVASKCGFTDLNYKQLTELYNR 60
           MGAS S +EKSIHEF VKD+K KDV+L+ YKGK+LLVVNVASKCG TD NY QLTELYN+
Sbjct: 1   MGASQSGSEKSIHEFRVKDYKAKDVDLSVYKGKVLLVVNVASKCGLTDSNYTQLTELYNK 60

Query: 61  YKDEDFEILAFPCNQFLKQEPGTSEVAQEFACTRYKAEYPIFQKIRVNGPDAAPVYKFLK 120
           YKD  FEILAFPCNQFLKQEPG+SE AQEFACTRYKAEYPIF K+RVNGPDAAPVYKFLK
Sbjct: 61  YKDRGFEILAFPCNQFLKQEPGSSEQAQEFACTRYKAEYPIFHKVRVNGPDAAPVYKFLK 120

Query: 121 ATSNGFLGTRIKWNFTKFLVDKEGVVINRYGPSTTPLSIESDIKKALG 169
           A  +GFLG+RIKWNFTKFLVDKEG V+ RYGP+T PL+IE+DI+KALG
Sbjct: 121 AHKSGFLGSRIKWNFTKFLVDKEGTVLARYGPTTAPLTIEADIQKALG 168

The following BLAST results are available for this feature:

BLAST of Carg07233-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953907.1	2.9e-97	98.88	protein HUA2-LIKE 2-like [Cucurbita moschata]	[more]
XP_023549407.1	3.7e-92	98.24	protein HUA2-LIKE 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022991770.1	2.2e-89	95.88	protein HUA2-LIKE 2-like [Cucurbita maxima]	[more]
KGN44868.1	2.2e-84	86.78	hypothetical protein Csa_7G392410 [Cucumis sativus]	[more]
XP_011659332.1	2.2e-84	86.78	PREDICTED: HUA2-like protein 3 isoform X2 [Cucumis sativus]	[more]

BLAST of Carg07233-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT2G48150.1	6.7e-72	73.65	glutathione peroxidase 4	[more]
AT3G63080.1	2.6e-68	71.60	glutathione peroxidase 5	[more]
AT4G11600.1	2.0e-60	61.99	glutathione peroxidase 6	[more]
AT4G31870.1	2.9e-59	60.98	glutathione peroxidase 7	[more]
AT2G25080.1	3.8e-59	59.76	glutathione peroxidase 1	[more]

BLAST of Carg07233-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8L910\|GPX4_ARATH	1.2e-70	73.65	Probable glutathione peroxidase 4 OS=Arabidopsis thaliana OX=3702 GN=GPX4 PE=2 S...	[more]
sp\|Q9LYB4\|GPX5_ARATH	4.8e-67	71.60	Probable glutathione peroxidase 5 OS=Arabidopsis thaliana OX=3702 GN=GPX5 PE=1 S...	[more]
sp\|P30708\|GPX4_NICSY	2.5e-60	63.69	Probable phospholipid hydroperoxide glutathione peroxidase OS=Nicotiana sylvestr...	[more]
sp\|Q9FXS3\|GPX4_TOBAC	4.3e-60	63.10	Probable phospholipid hydroperoxide glutathione peroxidase OS=Nicotiana tabacum ...	[more]
sp\|O23814\|GPX4_SPIOL	9.6e-60	60.23	Probable phospholipid hydroperoxide glutathione peroxidase OS=Spinacia oleracea ...	[more]

BLAST of Carg07233-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K5U8\|A0A0A0K5U8_CUCSA	1.4e-84	86.78	Glutathione peroxidase OS=Cucumis sativus OX=3659 GN=Csa_7G392410 PE=3 SV=1	[more]
tr\|A0A1S3BT48\|A0A1S3BT48_CUCME	1.9e-84	89.41	Glutathione peroxidase OS=Cucumis melo OX=3656 GN=LOC103492878 PE=3 SV=1	[more]
tr\|A0A2P5BVP1\|A0A2P5BVP1_9ROSA	2.1e-75	80.95	Glutathione peroxidase OS=Trema orientalis OX=63057 GN=TorRG33x02_306940 PE=3 SV...	[more]
tr\|A0A2P5CXR0\|A0A2P5CXR0_PARAD	3.5e-75	80.95	Glutathione peroxidase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_115180 PE=...	[more]
tr\|D7TPC9\|D7TPC9_VITVI	1.3e-74	80.95	Glutathione peroxidase OS=Vitis vinifera OX=29760 GN=VIT_07s0104g00320 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process
GO:0006979	response to oxidative stress

Vocabulary: **Molecular Function**
Term	Definition
GO:0004602	glutathione peroxidase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036249	Thioredoxin-like_sf
IPR029759	GPX_AS
IPR029760	GPX_CS
IPR000889	Glutathione_peroxidase

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0006749	glutathione metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004602	glutathione peroxidase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg07233	Carg07233	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg07233-RA.exon.1	Carg07233-RA.exon.1	exon
Carg07233-RA.exon.2	Carg07233-RA.exon.2	exon
Carg07233-RA.exon.3	Carg07233-RA.exon.3	exon
Carg07233-RA.exon.4	Carg07233-RA.exon.4	exon
Carg07233-RA.exon.5	Carg07233-RA.exon.5	exon
Carg07233-RA.exon.6	Carg07233-RA.exon.6	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg07233-RA.five_prime_UTR.1	Carg07233-RA.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg07233-RA.CDS.1	Carg07233-RA.CDS.1	CDS
Carg07233-RA.CDS.2	Carg07233-RA.CDS.2	CDS
Carg07233-RA.CDS.3	Carg07233-RA.CDS.3	CDS
Carg07233-RA.CDS.4	Carg07233-RA.CDS.4	CDS
Carg07233-RA.CDS.5	Carg07233-RA.CDS.5	CDS
Carg07233-RA.CDS.6	Carg07233-RA.CDS.6	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg07233-RA.three_prime_UTR.1	Carg07233-RA.three_prime_UTR.1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg07233-RA	Carg07233-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000889	Glutathione peroxidase	PRINTS	PR01011	GLUTPROXDASE	coord: 131..140 score: 82.86 coord: 30..47 score: 64.64 coord: 66..82 score: 71.8
IPR000889	Glutathione peroxidase	PIRSF	PIRSF000303	Glutathion_perox	coord: 1..170 e-value: 2.5E-66 score: 220.2
IPR000889	Glutathione peroxidase	PFAM	PF00255	GSHPx	coord: 12..120 e-value: 3.0E-40 score: 136.0
IPR000889	Glutathione peroxidase	PANTHER	PTHR11592	GLUTATHIONE PEROXIDASE	coord: 1..168
IPR000889	Glutathione peroxidase	PROSITE	PS51355	GLUTATHIONE_PEROXID_3	coord: 2..173 score: 68.726
IPR000889	Glutathione peroxidase	CDD	cd00340	GSH_Peroxidase	coord: 11..163 e-value: 3.37315E-85 score: 249.355
None	No IPR available	GENE3D	G3DSA:3.40.30.10		coord: 3..168 e-value: 1.1E-70 score: 238.4
None	No IPR available	PANTHER	PTHR11592:SF17	GLUTATHIONE PEROXIDASE 4-RELATED	coord: 1..168
IPR029760	Glutathione peroxidase conserved site	PROSITE	PS00763	GLUTATHIONE_PEROXID_2	coord: 69..76
IPR029759	Glutathione peroxidase active site	PROSITE	PS00460	GLUTATHIONE_PEROXID_1	coord: 32..47
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	SSF52833	Thioredoxin-like	coord: 10..167