Carg12946 (gene) Silver-seed gourd

Overview
NameCarg12946
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionEarly auxin response protein
LocationCucurbita_argyrosperma_scaffold_052 : 248650 .. 250680 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTTATCAAAGTTGATCGAAAAGACGAGAGATTGAATACTTATATGAGGGGAAAAGACGTTGTAATAGGGAGACAAAGATGTGACCAACCCGAGAGAGAGAAAAAGAGAGTCGACTTTTTGGAACTTGAAACAGTGGCAGCTAGTAGTTTGGTTGTGGAATTTCTCACATTTCTCTTCACTATATAAAGTGTTTTGCACTCTCATCTTGCCTTGGTGAGGTATAGTTCTCTAGACCTTGCTCTATCTGGCCTTATCGATAAGAATTCGAACTCGAACTAGAGGCCTCGAAGGGGATAAAGAAGAGGGTGTATCGCTGTTGCAAACTCGACGTTTGACAGATGAGGGTAAGTTAATGCAAGAGTGTTTTGTCATGATTTTGTATTCGGAAGTTGGTGTTTACTCTCCGTGATTAATTACGACTCGTTTTTGTTTGCAGATATTGAGTTGGATGCAAGGGAAGAAGACTAATGGCAGAAAGGGGAGCGAAAGAACAACATCAAATTCAACCAAGGGTGAGGAAGACTATATTCTTCTTTTATTTTCGTTTCTATTTACAGAGTGAACTCGTTTTGATGATGATCTTTTAGACGATTTGAGTGCAAATAGCTTGAATTTCTTGCTCAAACAGGTGAGATGGTGCACAGAACTCTCCCTGAAGAATTCAGCAGCTGGCCTCATGTGTTGCTGGCGATTGGAACGTTCGGAGACGATAATCTGAATCAAGCACGCCCAAAACGGTCTCAGGAGAATCCATCATCTTCCCTGGAACAACATCTTCAAGATCTTACACCTGAAGAACTAAACATACTTCACAAAGAGTTCAATCTGTTATTGGATGAACACCTTGAGCAATCGGGTCCATCCTTGGAATTTGAAGTCAGCCAGCATTGTCCATCAAACATATTTCTTACTAGAAGCTTCGAATCCGAAACATCAAAGAACGAACTATTTTACGACGAGCTGATAAAGAAGAGCGATAGTTTCCAGCATGTCATACTCAGCAAAAGCAAAGATGCAGGTACGGGAGCTCACGACACTACAGTCATTGGCAAGAGAACTTTATCCTTCCTTCTCAAGAAGATTTTCGTCTGCGGAGGTGGTATCGCACCCGCTACAGTTGCTCCTCCTCCGAGAATCATAACTCTGGAGTCGAAAATGGAGAAGGTAAAATCAAGAACTCAAATTCTCTGATTACTGTTCTGGTGGGATCAGTGTTGATGACTTTTTGTAGTCAAATATTGATAAAACTGTTTCTGAATCAGATGTTGAGGACAATACTCCAAAAGAAGATATACCCTCAAAACTCCAATGTCAGAACATCATCTATGAAAAAGTACCTGAAGAGGAAAAACAAGCAAAAAGATGAAAACGAAAACGAAAACGAAAACGGAAAGAACGACAAGAAGTGCGATGGAAGTAAATGGGTCCAGACTGATTCTGAATGTCAGTATGAACAATATAATCAGTATCAACTTTCTAGTTCCATCAGGTACACAAAATTCTGACTGTTTGTTTCCATTTCTTGTGCAGATATTGTTTTAGAAATCTGAGAAGCTACCACTGCCAAAGGAAAGATCACAAGACATCACTTTCTTGCTTGGTTGCTTGATTGTTTGTTCAAATGTTTAGCTATTGTTCTTATCTAACAGCTTGGAGGAATTGAAACTGAGCTCAAATTTATCCTTTAAGAAACACTCTCGAATAGCTGGGGATGTTCGTCACAATTACAGCGTCTGTTATATAAACTCACTCAGAAAAGCAAAAGCTTTGTCTTAGAGAGCCGAATCATTGTCTTGTAGCATGAAATCAAGACCAGAGAAGCCCACAAGAACTGTGGAAATGACCAATATTCTTACACTTTAGCTCACAAAAAGAGAGAGGTAGGGTCATTTTCACTGGTTCGTTTTAAACTGGACACGTTTCTTTCTGTTACTCGATCATATTTTTTGGAGATGTGAGTTTGCGAACATTTGGCTCCATTTAAGTTTATCATCGGGATATCGGTGATATGATCGGAGAGTTCCTCCT

mRNA sequence

TTTTTTATCAAAGTTGATCGAAAAGACGAGAGATTGAATACTTATATGAGGGGAAAAGACGTTGTAATAGGGAGACAAAGATGTGACCAACCCGAGAGAGAGAAAAAGAGAGTCGACTTTTTGGAACTTGAAACAGTGGCAGCTAGTAGTTTGGTTGTGGAATTTCTCACATTTCTCTTCACTATATAAAGTGTTTTGCACTCTCATCTTGCCTTGGTGAGGTATAGTTCTCTAGACCTTGCTCTATCTGGCCTTATCGATAAGAATTCGAACTCGAACTAGAGGCCTCGAAGGGGATAAAGAAGAGGGTGTATCGCTGTTGCAAACTCGACGTTTGACAGATGAGGATATTGAGTTGGATGCAAGGGAAGAAGACTAATGGCAGAAAGGGGAGCGAAAGAACAACATCAAATTCAACCAAGGGTGAGATGGTGCACAGAACTCTCCCTGAAGAATTCAGCAGCTGGCCTCATGTGTTGCTGGCGATTGGAACGTTCGGAGACGATAATCTGAATCAAGCACGCCCAAAACGGTCTCAGGAGAATCCATCATCTTCCCTGGAACAACATCTTCAAGATCTTACACCTGAAGAACTAAACATACTTCACAAAGAGTTCAATCTGTTATTGGATGAACACCTTGAGCAATCGGGTCCATCCTTGGAATTTGAAGTCAGCCAGCATTGTCCATCAAACATATTTCTTACTAGAAGCTTCGAATCCGAAACATCAAAGAACGAACTATTTTACGACGAGCTGATAAAGAAGAGCGATAGTTTCCAGCATGTCATACTCAGCAAAAGCAAAGATGCAGGTACGGGAGCTCACGACACTACAGTCATTGGCAAGAGAACTTTATCCTTCCTTCTCAAGAAGATTTTCGTCTGCGGAGGTGGTATCGCACCCGCTACAGTTGCTCCTCCTCCGAGAATCATAACTCTGGAGTCGAAAATGGAGAAGATGTTGAGGACAATACTCCAAAAGAAGATATACCCTCAAAACTCCAATGTCAGAACATCATCTATGAAAAAGTACCTGAAGAGGAAAAACAAGCAAAAAGATGAAAACGAAAACGAAAACGAAAACGGAAAGAACGACAAGAAGTGCGATGGAAGTAAATGGGTCCAGACTGATTCTGAATGTCAATATTGTTTTAGAAATCTGAGAAGCTACCACTGCCAAAGGAAAGATCACAAGACATCACTTTCTTGCTTGGTTGCTTGATTGTTTGTTCAAATGTTTAGCTATTGTTCTTATCTAACAGCTTGGAGGAATTGAAACTGAGCTCAAATTTATCCTTTAAGAAACACTCTCGAATAGCTGGGGATGTTCGTCACAATTACAGCGTCTGTTATATAAACTCACTCAGAAAAGCAAAAGCTTTGTCTTAGAGAGCCGAATCATTGTCTTGTAGCATGAAATCAAGACCAGAGAAGCCCACAAGAACTGTGGAAATGACCAATATTCTTACACTTTAGCTCACAAAAAGAGAGAGGTAGGGTCATTTTCACTGGTTCGTTTTAAACTGGACACGTTTCTTTCTGTTACTCGATCATATTTTTTGGAGATGTGAGTTTGCGAACATTTGGCTCCATTTAAGTTTATCATCGGGATATCGGTGATATGATCGGAGAGTTCCTCCT

Coding sequence (CDS)

ATGAGGATATTGAGTTGGATGCAAGGGAAGAAGACTAATGGCAGAAAGGGGAGCGAAAGAACAACATCAAATTCAACCAAGGGTGAGATGGTGCACAGAACTCTCCCTGAAGAATTCAGCAGCTGGCCTCATGTGTTGCTGGCGATTGGAACGTTCGGAGACGATAATCTGAATCAAGCACGCCCAAAACGGTCTCAGGAGAATCCATCATCTTCCCTGGAACAACATCTTCAAGATCTTACACCTGAAGAACTAAACATACTTCACAAAGAGTTCAATCTGTTATTGGATGAACACCTTGAGCAATCGGGTCCATCCTTGGAATTTGAAGTCAGCCAGCATTGTCCATCAAACATATTTCTTACTAGAAGCTTCGAATCCGAAACATCAAAGAACGAACTATTTTACGACGAGCTGATAAAGAAGAGCGATAGTTTCCAGCATGTCATACTCAGCAAAAGCAAAGATGCAGGTACGGGAGCTCACGACACTACAGTCATTGGCAAGAGAACTTTATCCTTCCTTCTCAAGAAGATTTTCGTCTGCGGAGGTGGTATCGCACCCGCTACAGTTGCTCCTCCTCCGAGAATCATAACTCTGGAGTCGAAAATGGAGAAGATGTTGAGGACAATACTCCAAAAGAAGATATACCCTCAAAACTCCAATGTCAGAACATCATCTATGAAAAAGTACCTGAAGAGGAAAAACAAGCAAAAAGATGAAAACGAAAACGAAAACGAAAACGGAAAGAACGACAAGAAGTGCGATGGAAGTAAATGGGTCCAGACTGATTCTGAATGTCAATATTGTTTTAGAAATCTGAGAAGCTACCACTGCCAAAGGAAAGATCACAAGACATCACTTTCTTGCTTGGTTGCTTGA

Protein sequence

MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQARPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIFLTRSFESETSKNELFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKKIFVCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKRKNKQKDENENENENGKNDKKCDGSKWVQTDSECQYCFRNLRSYHCQRKDHKTSLSCLVA
Homology
[Close]
BLAST of Carg12946 vs. NCBI nr
Match: XP_022960800.1 (uncharacterized protein LOC111461494 isoform X1 [Cucurbita moschata])

HSP 1 Score: 487.3 bits (1253), Expect = 3.7e-134
Identity = 262/269 (97.40%), Postives = 264/269 (98.14%), Query Frame = 0 

Query: 1   MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA 60
           MRILSWMQGKKTNGRKGS+RTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA
Sbjct: 1   MRILSWMQGKKTNGRKGSKRTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA 60

Query: 61  RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF 120
           RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF
Sbjct: 61  RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF 120

Query: 121 LTRSFESETSKNELFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKKIF 180
           LTRSFESETSKNELFYDELIKKSDSFQHVILSK+KDAGTGAHDTTVIGKRTLSFLLKKIF
Sbjct: 121 LTRSFESETSKNELFYDELIKKSDSFQHVILSKNKDAGTGAHDTTVIGKRTLSFLLKKIF 180

Query: 181 VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKXXXXXXX 240
           VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLK   XXXX
Sbjct: 181 VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLK--RXXXX 240

Query: 241 XXXXXXXXXXXDKKCDGSKWVQTDSECQY 270
           XXXXXXXXX  DKKCDGSKWVQTDSECQY
Sbjct: 241 XXXXXXXXXKNDKKCDGSKWVQTDSECQY 267

[Close]
BLAST of Carg12946 vs. NCBI nr
Match: XP_022960801.1 (uncharacterized protein LOC111461494 isoform X2 [Cucurbita moschata])

HSP 1 Score: 479.6 bits (1233), Expect = 7.8e-132
Identity = 259/266 (97.37%), Postives = 261/266 (98.12%), Query Frame = 0 

Query: 1   MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA 60
           MRILSWMQGKKTNGRKGS+RTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA
Sbjct: 1   MRILSWMQGKKTNGRKGSKRTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA 60

Query: 61  RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF 120
           RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF
Sbjct: 61  RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF 120

Query: 121 LTRSFESETSKNELFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKKIF 180
           LTRSFESETSKNELFYDELIKKSDSFQHVILSK+KDAGTGAHDTTVIGKRTLSFLLKKIF
Sbjct: 121 LTRSFESETSKNELFYDELIKKSDSFQHVILSKNKDAGTGAHDTTVIGKRTLSFLLKKIF 180

Query: 181 VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKXXXXXXX 240
           VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLK   XXXX
Sbjct: 181 VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLK--RXXXX 240

Query: 241 XXXXXXXXXXXDKKCDGSKWVQTDSE 267
           XXXXXXXXX  DKKCDGSKWVQTDSE
Sbjct: 241 XXXXXXXXXKNDKKCDGSKWVQTDSE 264

[Close]
BLAST of Carg12946 vs. NCBI nr
Match: XP_023516153.1 (uncharacterized protein LOC111780100 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 466.8 bits (1200), Expect = 5.2e-128
Identity = 256/269 (95.17%), Postives = 261/269 (97.03%), Query Frame = 0 

Query: 1   MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA 60
           MRILSWMQGKKTNGRKGS+RTTSNSTK EMVHRTLPEEFS+WPHVLLAIGTFGDDNLNQA
Sbjct: 1   MRILSWMQGKKTNGRKGSKRTTSNSTKDEMVHRTLPEEFSNWPHVLLAIGTFGDDNLNQA 60

Query: 61  RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF 120
           RPK SQENPSSSL+QHLQDLTPEELNILHKEFNLLLDEHL+QSGPSLEFEVSQHCPSNIF
Sbjct: 61  RPKSSQENPSSSLQQHLQDLTPEELNILHKEFNLLLDEHLKQSGPSLEFEVSQHCPSNIF 120

Query: 121 LTRSFESETSKNELFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKKIF 180
           LTRSFESETSKNELFYD+LIKKSDSFQHVILSKSKDAG GAHDTTVIGKR LSFLLKKIF
Sbjct: 121 LTRSFESETSKNELFYDKLIKKSDSFQHVILSKSKDAGPGAHDTTVIGKRNLSFLLKKIF 180

Query: 181 VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKXXXXXXX 240
           VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYL  XXXXXX
Sbjct: 181 VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYL--XXXXXX 240

Query: 241 XXXXXXXXXXXDKKCDGSKWVQTDSECQY 270
           XXXXXXXXXXX  KCDGSKWVQTDSECQY
Sbjct: 241 XXXXXXXXXXXXXKCDGSKWVQTDSECQY 267

[Close]
BLAST of Carg12946 vs. NCBI nr
Match: XP_023516154.1 (uncharacterized protein LOC111780100 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 459.1 bits (1180), Expect = 1.1e-125
Identity = 253/266 (95.11%), Postives = 258/266 (96.99%), Query Frame = 0 

Query: 1   MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA 60
           MRILSWMQGKKTNGRKGS+RTTSNSTK EMVHRTLPEEFS+WPHVLLAIGTFGDDNLNQA
Sbjct: 1   MRILSWMQGKKTNGRKGSKRTTSNSTKDEMVHRTLPEEFSNWPHVLLAIGTFGDDNLNQA 60

Query: 61  RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF 120
           RPK SQENPSSSL+QHLQDLTPEELNILHKEFNLLLDEHL+QSGPSLEFEVSQHCPSNIF
Sbjct: 61  RPKSSQENPSSSLQQHLQDLTPEELNILHKEFNLLLDEHLKQSGPSLEFEVSQHCPSNIF 120

Query: 121 LTRSFESETSKNELFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKKIF 180
           LTRSFESETSKNELFYD+LIKKSDSFQHVILSKSKDAG GAHDTTVIGKR LSFLLKKIF
Sbjct: 121 LTRSFESETSKNELFYDKLIKKSDSFQHVILSKSKDAGPGAHDTTVIGKRNLSFLLKKIF 180

Query: 181 VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKXXXXXXX 240
           VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYL  XXXXXX
Sbjct: 181 VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYL--XXXXXX 240

Query: 241 XXXXXXXXXXXDKKCDGSKWVQTDSE 267
           XXXXXXXXXXX  KCDGSKWVQTDSE
Sbjct: 241 XXXXXXXXXXXXXKCDGSKWVQTDSE 264

[Close]
BLAST of Carg12946 vs. NCBI nr
Match: XP_022987325.1 (uncharacterized protein LOC111484913 isoform X1 [Cucurbita maxima])

HSP 1 Score: 444.5 bits (1142), Expect = 2.8e-121
Identity = 247/269 (91.82%), Postives = 256/269 (95.17%), Query Frame = 0 

Query: 1   MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA 60
           MRILSWMQGKK NGRK S+R TSNSTK EMVHRTLPEEFSSWPHVLLAIGTFGD+NLNQA
Sbjct: 1   MRILSWMQGKKANGRKESKR-TSNSTKDEMVHRTLPEEFSSWPHVLLAIGTFGDENLNQA 60

Query: 61  RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF 120
           RPK SQENPSSSL QH+QDLTPEELNILHKEFNLLLDEHL+QSGPSLEFEVSQHCPSN+ 
Sbjct: 61  RPKSSQENPSSSL-QHVQDLTPEELNILHKEFNLLLDEHLKQSGPSLEFEVSQHCPSNML 120

Query: 121 LTRSFESETSKNELFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKKIF 180
           LTRSFESET+KNE FYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKKIF
Sbjct: 121 LTRSFESETTKNEPFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKKIF 180

Query: 181 VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKXXXXXXX 240
           VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVR SSMKKYL+ XXXXXX
Sbjct: 181 VCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRISSMKKYLRRXXXXXX 240

Query: 241 XXXXXXXXXXXDKKCDGSKWVQTDSECQY 270
           XXXXXXXXXXX   C+G+KWVQTDSECQY
Sbjct: 241 XXXXXXXXXXXXXTCNGNKWVQTDSECQY 267

[Close]
BLAST of Carg12946 vs. TAIR10
Match: AT1G17400.1 (unknown protein)

HSP 1 Score: 105.5 bits (262), Expect = 5.6e-23
Identity = 96/297 (32.32%), Postives = 143/297 (48.15%), Query Frame = 0 

Query: 1   MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFG--DDNLN 60
           M+   WMQ  K NG     RT+++S     V +   EEFS WPH LLAIGTFG   ++++
Sbjct: 1   MKFFGWMQ-NKLNG--DHNRTSTSSASSHHVKQEPREEFSDWPHALLAIGTFGTTSNSVS 60

Query: 61  QARPK----------------RSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQ 120
           +   K                  +E PSSS+  +L+D TPEE+  L KE   LL    ++
Sbjct: 61  ENESKNVHEEIEAEKKCTAQSEQEEEPSSSV--NLEDFTPEEVGKLQKELMKLLSRTKKR 120

Query: 121 SG-------PSLEFEVSQHCPSNIFLTRSFESETSKNELFYDELIKKSDSFQ--HVILSK 180
                     +L  +   +CPS++ + R   +  S   +   E  K+ D  +  +VIL +
Sbjct: 121 KSDVNRELMKNLPLDRFLNCPSSLEVDRRISNALSA-VVDSSEENKEEDMERTINVILGR 180

Query: 181 SKDAGTGAHDTTV---IGKRTLSFLLKKIFVCGGGIAPATVAPPPRIITLESKMEKMLRT 240
            K+    + +      I K ++S+L KKIFVC  GI+ A  +P  R    ES+MEK+L+ 
Sbjct: 181 CKEISIESKNNKKKRDISKNSVSYLFKKIFVCADGISTAP-SPSLRDTLQESRMEKLLKM 240

Query: 241 ILQKKIYPQNSNVRTS-SMKKYLKXXXXXXXXXXXXXXXXXXDKKCDGSKWVQTDSE 267
           +L KKI  Q S+  TS + K+YL+                      DG KWV+TDS+
Sbjct: 241 MLHKKINAQASSKPTSLTTKRYLQDKKQLSLKSEEEETSERRSSS-DGYKWVKTDSD 289

[Close]
BLAST of Carg12946 vs. TAIR10
Match: AT1G72490.1 (unknown protein)

HSP 1 Score: 94.0 bits (232), Expect = 1.7e-19
Identity = 90/297 (30.30%), Postives = 136/297 (45.79%), Query Frame = 0 

Query: 1   MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGD------ 60
           M+   WMQ K    ++ + R + +S           EEF+ WPH LLAIGTFG+      
Sbjct: 1   MKFFGWMQNKLHGKQEITHRPSISSASSHHPR----EEFNDWPHGLLAIGTFGNKKQTPQ 60

Query: 61  ------------DNLN-QARPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLE 120
                        NL+ + R  +  +   SS +   +D TPEE+  L KE   LL    +
Sbjct: 61  TLDQEVIQEETVSNLHVEGRQAQDTDQELSSSDDLEEDFTPEEVGKLQKELTKLLTRRSK 120

Query: 121 QSGPSLEFEVSQ-------HCPSNIFLTRSFESETSKNELFYDELIKKSDSFQHVILSKS 180
           +    +  E++        +CPS++ + R   +     +   +E I+++ S   VIL + 
Sbjct: 121 KRKSDVNRELANLPLDRFLNCPSSLEVDRRISNALCDEK---EEDIERTIS---VILGRC 180

Query: 181 KDAGTGAHDTTVIGKRTL-----SFLLKKIFVCGGGIAPATVAPPPRIITLESKMEKMLR 240
           K   T + + T   KR L     S LLKK+FVC  G +P    P  R    E++MEK+LR
Sbjct: 181 KAISTESKNKTKKNKRDLSKTSVSHLLKKMFVCTEGFSPVP-RPILRDTFQETRMEKLLR 240

Query: 241 TILQKKIYPQNSNVRTSSMKKYLKXXXXXXXXXXXXXXXXXXDKKCDGSKWVQTDSE 267
            +L KK+  Q S+ +TS+ KKYL+                      DG KWV+TDS+
Sbjct: 241 MMLHKKVNTQASSKQTST-KKYLQDKQQLSLKNEEEEGR----SSNDGGKWVKTDSD 281

[Close]
BLAST of Carg12946 vs. TAIR10
Match: AT1G19115.3 (unknown protein)

HSP 1 Score: 72.8 bits (177), Expect = 4.0e-13
Identity = 50/122 (40.98%), Postives = 63/122 (51.64%), Query Frame = 0 

Query: 154 SKDAGTGAHDTTVIGKRTLSFLLKKIFVCGGGIAPATVAPPPRIITL-------ESKMEK 213
           SKD      D T+  K++LSFLLKK+FVC  G        PP ++ L        ++MEK
Sbjct: 69  SKDITPVNTDVTIGKKKSLSFLLKKMFVCTSGF-----KTPPPLLDLSRGDSLHNTRMEK 128

Query: 214 MLRTILQKKIYPQNSNVRTSSMKKYLKXXXXXXXXXXXXXXXXXXDKKCDGSKWVQTDSE 269
           MLRTIL KKI+PQ SN   S  KKYL+                      D +KWV+TDSE
Sbjct: 129 MLRTILNKKIHPQRSN---SIAKKYLESNHKIMDEAR---------SSVDANKWVKTDSE 173

[Close]
BLAST of Carg12946 vs. TrEMBL
Match: tr|A0A1S3BRG2|A0A1S3BRG2_CUCME (uncharacterized protein LOC103492380 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492380 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.1e-92
Identity = 206/269 (76.58%), Postives = 231/269 (85.87%), Query Frame = 0 

Query: 1   MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA 60
           MRIL+WMQGKK +GRKGS+R TSNS   E+VH+T P+EFS+W HVLLAIGTFGD+NLN+A
Sbjct: 1   MRILNWMQGKKPSGRKGSKR-TSNSINDEIVHKTHPKEFSNWSHVLLAIGTFGDENLNEA 60

Query: 61  RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF 120
           RPKRSQENPSSSL+QHL+DLTPEELNIL KEFNLLL EHL+QSGP+LEFEVS+HCPSNIF
Sbjct: 61  RPKRSQENPSSSLQQHLKDLTPEELNILQKEFNLLLAEHLKQSGPTLEFEVSKHCPSNIF 120

Query: 121 LTR--SFESETSKNELFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKK 180
           L R  +F SET+K EL+Y+ELIKKS+ FQHVILSK KD G  A+DT +IGK+TLS LLKK
Sbjct: 121 LNRQLTFGSETTKKELYYEELIKKSNIFQHVILSKGKDVGVEANDTAIIGKKTLSLLLKK 180

Query: 181 IFVCGGGIA-PATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKXXXX 240
           IFVCGGG A PA V PP RI TLES MEK+LRTILQKKIYP++SNVRTSS      XXXX
Sbjct: 181 IFVCGGGTAPPAVVTPPLRITTLESTMEKILRTILQKKIYPRSSNVRTSSK----XXXXX 240

Query: 241 XXXXXXXXXXXXXXDKKCDGSKWVQTDSE 267
           XXXXXXXXXXXXXX    DGSKWVQTDSE
Sbjct: 241 XXXXXXXXXXXXXXXXXXDGSKWVQTDSE 264

[Close]
BLAST of Carg12946 vs. TrEMBL
Match: tr|A0A0A0LWQ1|A0A0A0LWQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G597130 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.1e-92
Identity = 204/268 (76.12%), Postives = 226/268 (84.33%), Query Frame = 0 

Query: 1   MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA 60
           MRIL+WMQGKK +GRKGS+RTTSNS   E+VH+T PEEFS+W HVLLAIGTFGD+NLN+A
Sbjct: 1   MRILNWMQGKKPSGRKGSKRTTSNSINDEIVHKTRPEEFSNWSHVLLAIGTFGDENLNEA 60

Query: 61  RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF 120
           RPKRSQEN SSSL+QHL+DLTPEELNIL KEFNLLL EHL+QSGP+LEFEVS+HCPSNIF
Sbjct: 61  RPKRSQENSSSSLQQHLKDLTPEELNILQKEFNLLLAEHLKQSGPTLEFEVSKHCPSNIF 120

Query: 121 LTR--SFESETSKNELFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKK 180
           L R  +F SET+K EL Y+ELIKKS+ FQHVILSK KD G  A+DT +IGKRTLS LLKK
Sbjct: 121 LNRQLTFGSETTKKELCYEELIKKSNIFQHVILSKGKDVGVDANDTAIIGKRTLSLLLKK 180

Query: 181 IFVCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKXXXXX 240
           IFVCGGG AP  V  PP    LESKMEK+LRTILQKKIYP++SNVRTSS      XXXXX
Sbjct: 181 IFVCGGGTAPPAVVTPPLRPALESKMEKILRTILQKKIYPRSSNVRTSSK----XXXXXX 240

Query: 241 XXXXXXXXXXXXXDKKCDGSKWVQTDSE 267
           XXXXXXXXXXXXX     GSKWVQTDSE
Sbjct: 241 XXXXXXXXXXXXXXXXXXGSKWVQTDSE 264

[Close]
BLAST of Carg12946 vs. TrEMBL
Match: tr|A0A1S3BR41|A0A1S3BR41_CUCME (uncharacterized protein LOC103492380 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492380 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 5.8e-91
Identity = 207/298 (69.46%), Postives = 232/298 (77.85%), Query Frame = 0 

Query: 1   MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA 60
           MRIL+WMQGKK +GRKGS+R TSNS   E+VH+T P+EFS+W HVLLAIGTFGD+NLN+A
Sbjct: 1   MRILNWMQGKKPSGRKGSKR-TSNSINDEIVHKTHPKEFSNWSHVLLAIGTFGDENLNEA 60

Query: 61  RPKRSQENPSSSLEQHLQDLTPEELNILHKEFNLLLDEHLEQSGPSLEFEVSQHCPSNIF 120
           RPKRSQENPSSSL+QHL+DLTPEELNIL KEFNLLL EHL+QSGP+LEFEVS+HCPSNIF
Sbjct: 61  RPKRSQENPSSSLQQHLKDLTPEELNILQKEFNLLLAEHLKQSGPTLEFEVSKHCPSNIF 120

Query: 121 LTR--SFESETSKNELFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFLLKK 180
           L R  +F SET+K EL+Y+ELIKKS+ FQHVILSK KD G  A+DT +IGK+TLS LLKK
Sbjct: 121 LNRQLTFGSETTKKELYYEELIKKSNIFQHVILSKGKDVGVEANDTAIIGKKTLSLLLKK 180

Query: 181 IFVCGGGIA-PATVAPPPRIITLESKMEK-----------------------------ML 240
           IFVCGGG A PA V PP RI TLES MEK                             +L
Sbjct: 181 IFVCGGGTAPPAVVTPPLRITTLESTMEKVESRTHINAQIFDLNFGNLILISISGCKQIL 240

Query: 241 RTILQKKIYPQNSNVRTSSMKKYLKXXXXXXXXXXXXXXXXXXDKKCDGSKWVQTDSE 267
           RTILQKKIYP++SNVRTSS KKYL    XXXXXXXXXXXXXXX    DGSKWVQTDSE
Sbjct: 241 RTILQKKIYPRSSNVRTSSKKKYL----XXXXXXXXXXXXXXXXXXSDGSKWVQTDSE 293

[Close]
BLAST of Carg12946 vs. TrEMBL
Match: tr|A0A2P6RYU9|A0A2P6RYU9_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0146241 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 4.8e-37
Identity = 118/282 (41.84%), Postives = 162/282 (57.45%), Query Frame = 0 

Query: 1   MRILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQA 60
           MR+  W+QG K NG++G+++  + ST   +V     EEF+ WPH LLAIGTFG++NL + 
Sbjct: 1   MRLFGWVQG-KLNGKQGNKKPNTASTSTHLVKPEPREEFNDWPHGLLAIGTFGNNNLKEN 60

Query: 61  RPKRS---QENPSSSLEQHLQDLTPEELNILHKEFNLLLDE--HLEQSGPSLEFEVSQHC 120
              RS   QE PSSS ++ L++ TPEE+  LHKE   LL     +E+   +L  +   +C
Sbjct: 61  TDHRSQNIQEEPSSS-DEILENFTPEEVGKLHKELTKLLTRKPDIEKEIAALPLDRFLNC 120

Query: 121 PSNIFLTRSFESE-TSKNELFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSF 180
           PS++ + R   +   S ++   DE I+K+ S   VIL + KD    + +   IGK++LSF
Sbjct: 121 PSSLEVDRRTSNVLCSDSDDPKDEDIEKTIS---VILGRCKDICADS-NKKAIGKKSLSF 180

Query: 181 LLKKIFVCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKX 240
           LLKK+FVC  G AP   AP  R    ES+MEK LR +L KKI    S+ R SSMKKYL+ 
Sbjct: 181 LLKKMFVCRSGFAP---APSLRDTFQESRMEKFLRLMLNKKIINPQSSSRASSMKKYLED 240

Query: 241 XXXXXXXXXXXXXXXXXDKKCDGSKWVQTDSECQYCFRNLRS 277
                            +K  DG KWV+TDSEC+ C  N RS
Sbjct: 241 TRQSPTKKGNNNEENTKEKINDGCKWVKTDSECK-CNLNFRS 272

[Close]
BLAST of Carg12946 vs. TrEMBL
Match: tr|F6HXU8|F6HXU8_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_09s0002g00940 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.9e-34
Identity = 112/271 (41.33%), Postives = 150/271 (55.35%), Query Frame = 0 

Query: 3   ILSWMQGKKTNGRKGSERTTSNSTKGEMVHRTLPEEFSSWPHVLLAIGTFGDDNLNQARP 62
           +  WMQ  K N R+G+ +T + S         + EEFS WPH LLAIGTFG+++L +   
Sbjct: 9   LFGWMQ-NKLNVRQGNRKTNAPSATHLTKQEPIKEEFSDWPHGLLAIGTFGNNDLKENPE 68

Query: 63  KRS---QENPSSSLEQHLQDLTPEELNILHKEFNLLLD----EHLEQSGPSLEFEVSQHC 122
            ++   QE+PSSS  + L D TPEE+  L KE   LL      ++E+    L  +   +C
Sbjct: 69  SQNPPHQEDPSSS--EELLDFTPEEIGKLQKELTKLLSRKPASNVEKEIAELPLDKFLNC 128

Query: 123 PSNIFLTRSFESETSKNELFYDELIKKSDSFQHVILSKSKDAGTGAHDTTVIGKRTLSFL 182
           PS++ + R   +    +    DE I+++ S   VIL K ++  T  H    IGKR+LSFL
Sbjct: 129 PSSLEVDRRISATLCSDSDDKDENIERTIS---VILGKCREVCTD-HGKKNIGKRSLSFL 188

Query: 183 LKKIFVCGGGIAPATVAPPPRIITLESKMEKMLRTILQKKIYPQNSNVRTSSMKKYLKXX 242
           LKK+FVC  G AP   AP  R    ES+MEK+LR +L KKIYPQNS+ R SSMKKYL+  
Sbjct: 189 LKKMFVCRSGFAP---APSLRDTLQESRMEKLLRAMLHKKIYPQNSS-RASSMKKYLEDK 248

Query: 243 XXXXXXXXXXXXXXXXDKKCDGSKWVQTDSE 267
                            K  DG KWV+TDSE
Sbjct: 249 QRPKRENEDEVQEKHKAK--DGYKWVKTDSE 266

The following BLAST results are available for this feature:
BLAST of Carg12946 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022960800.13.7e-13497.40uncharacterized protein LOC111461494 isoform X1 [Cucurbita moschata][more]
XP_022960801.17.8e-13297.37uncharacterized protein LOC111461494 isoform X2 [Cucurbita moschata][more]
XP_023516153.15.2e-12895.17uncharacterized protein LOC111780100 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_023516154.11.1e-12595.11uncharacterized protein LOC111780100 isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022987325.12.8e-12191.82uncharacterized protein LOC111484913 isoform X1 [Cucurbita maxima][more]
BLAST of Carg12946 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G17400.15.6e-2332.32unknown protein[more]
AT1G72490.11.7e-1930.30unknown protein[more]
AT1G19115.34.0e-1340.98unknown protein[more]
BLAST of Carg12946 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg12946 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BRG2|A0A1S3BRG2_CUCME1.1e-9276.58uncharacterized protein LOC103492380 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A0A0LWQ1|A0A0A0LWQ1_CUCSA1.1e-9276.12Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G597130 PE=4 SV=1[more]
tr|A0A1S3BR41|A0A1S3BR41_CUCME5.8e-9169.46uncharacterized protein LOC103492380 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A2P6RYU9|A0A2P6RYU9_ROSCH4.8e-3741.84Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0146241 PE=4... [more]
tr|F6HXU8|F6HXU8_VITVI2.9e-3441.33Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_09s0002g00940 PE=4 SV=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg12946-RACarg12946-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 228..252
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..255
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 234..255
NoneNo IPR availablePANTHERPTHR34045FAMILY NOT NAMEDcoord: 1..267
NoneNo IPR availablePANTHERPTHR34045:SF3SUBFAMILY NOT NAMEDcoord: 1..267

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg12946Cla011148Watermelon (97103) v1carwmB0090
Carg12946Csa1G597130Cucumber (Chinese Long) v2carcuB0101
Carg12946Csa7G448840Cucumber (Chinese Long) v2carcuB0104
Carg12946MELO3C024339Melon (DHL92) v3.5.1carmeB0095
Carg12946MELO3C015533Melon (DHL92) v3.5.1carmeB0096
Carg12946ClCG03G014950Watermelon (Charleston Gray)carwcgB0094
Carg12946CSPI07G22380Wild cucumber (PI 183967)carcpiB0109
Carg12946CSPI01G28830Wild cucumber (PI 183967)carcpiB0106
Carg12946Cucsa.360110Cucumber (Gy14) v1carcgyB0115
Carg12946Cucsa.141870Cucumber (Gy14) v1carcgyB0112
Carg12946CmaCh08G008090Cucurbita maxima (Rimu)carcmaB0126
Carg12946CmaCh17G006760Cucurbita maxima (Rimu)carcmaB0122
Carg12946CmaCh11G007450Cucurbita maxima (Rimu)carcmaB0120
Carg12946CmaCh10G007770Cucurbita maxima (Rimu)carcmaB0119
Carg12946CmoCh10G008060Cucurbita moschata (Rifu)carcmoB0128
Carg12946CmoCh08G007790Cucurbita moschata (Rifu)carcmoB0135
Carg12946CmoCh17G006560Cucurbita moschata (Rifu)carcmoB0131
Carg12946CmoCh11G007570Cucurbita moschata (Rifu)carcmoB0129
Carg12946Lsi06G003490Bottle gourd (USVL1VR-Ls)carlsiB086
Carg12946Lsi02G028860Bottle gourd (USVL1VR-Ls)carlsiB084
Carg12946Cp4.1LG18g03140Cucurbita pepo (Zucchini)carcpeB0138
Carg12946Cp4.1LG17g04030Cucurbita pepo (Zucchini)carcpeB0137
Carg12946Cp4.1LG12g09330Cucurbita pepo (Zucchini)carcpeB0136
Carg12946Cp4.1LG04g11110Cucurbita pepo (Zucchini)carcpeB0141
Carg12946CsGy1G028070Cucumber (Gy14) v2carcgybB0101
Carg12946CsGy7G020680Cucumber (Gy14) v2carcgybB0104
Carg12946MELO3C024339.2Melon (DHL92) v3.6.1carmedB0097
Carg12946MELO3C015533.2Melon (DHL92) v3.6.1carmedB0098
Carg12946CsaV3_7G034300Cucumber (Chinese Long) v3carcucB0113
Carg12946CsaV3_1G041200Cucumber (Chinese Long) v3carcucB0109
Carg12946Cla97C03G065170Watermelon (97103) v2carwmbB0094
Carg12946Cla97C09G163160Watermelon (97103) v2carwmbB0097
Carg12946Bhi09G000239Wax gourdcarwgoB0109
Carg12946Bhi02G001497Wax gourdcarwgoB0110
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg12946Carg13927Silver-seed gourdcarcarB105
The following block(s) are covering this gene:
GeneOrganismBlock
Carg12946Wax gourdcarwgoB0108
Carg12946Silver-seed gourdcarcarB102
Carg12946Silver-seed gourdcarcarB106
Carg12946Silver-seed gourdcarcarB108
Carg12946Cucumber (Gy14) v2carcgybB0103
Carg12946Cucurbita maxima (Rimu)carcmaB0121
Carg12946Cucurbita maxima (Rimu)carcmaB0123
Carg12946Cucurbita moschata (Rifu)carcmoB0127
Carg12946Cucurbita moschata (Rifu)carcmoB0130
Carg12946Cucurbita pepo (Zucchini)carcpeB0139
Carg12946Cucurbita pepo (Zucchini)carcpeB0143
Carg12946Wild cucumber (PI 183967)carcpiB0108
Carg12946Cucumber (Chinese Long) v2carcuB0103
Carg12946Cucumber (Chinese Long) v3carcucB0111
Carg12946Bottle gourd (USVL1VR-Ls)carlsiB085
Carg12946Melon (DHL92) v3.5.1carmeB0098
Carg12946Melon (DHL92) v3.6.1carmedB0100
Carg12946Watermelon (Charleston Gray)carwcgB0092
Carg12946Watermelon (97103) v1carwmB0089