Carg05109 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05109
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	2Fe-2S ferredoxin-like
Location	Cucurbita_argyrosperma_scaffold_060 : 1440422 .. 1440910 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGTCGCGAACCTCCACAGGCTCCGCCAAATCCACCGTCTGCCGGCGATTAGCTACTCAATTTTCACAAGAGGGTCAGCGTCGGCCGTCGCCTCGTCGGAAACCCCATCGTCCTCGTCCAAAAAGGTGTCAGATCGCATCGTCAAACTGTTCGCGATTGATCCGGAGGGCACGAAGAAGGAGATTGTCGGATTGACCGGGCAGACTCTTCTGAAGGCGCTCGCTAATCGGGGTCTGATTGACCCCGAATCCCATCGATTGGAAGACATCAGCGCGTGTTCGGCCGAATGCGAGGTCAGTATCGCTCAGGAGTGGCTCGAGAAGCTGCCGCCGCGGTCCTACGATGAGGAGTATGTGCTGAAGAGAAATTCTAGGGTTAGGGCTTTGAACAAGCACTCGAGGCTGGGCTGCCAGGTTATTCTCACCCCCGACCTTCAAGGTATGGTTGTTGCTGTCCCCGAGCCCAAACCTTGGGAGATTCCTTAA

mRNA sequence

ATGGCAGTCGCGAACCTCCACAGGCTCCGCCAAATCCACCGTCTGCCGGCGATTAGCTACTCAATTTTCACAAGAGGGTCAGCGTCGGCCGTCGCCTCGTCGGAAACCCCATCGTCCTCGTCCAAAAAGGTGTCAGATCGCATCGTCAAACTGTTCGCGATTGATCCGGAGGGCACGAAGAAGGAGATTGTCGGATTGACCGGGCAGACTCTTCTGAAGGCGCTCGCTAATCGGGGTCTGATTGACCCCGAATCCCATCGATTGGAAGACATCAGCGCGTGTTCGGCCGAATGCGAGGTCAGTATCGCTCAGGAGTGGCTCGAGAAGCTGCCGCCGCGGTCCTACGATGAGGAGTATGTGCTGAAGAGAAATTCTAGGGTTAGGGCTTTGAACAAGCACTCGAGGCTGGGCTGCCAGGTTATTCTCACCCCCGACCTTCAAGGTATGGTTGTTGCTGTCCCCGAGCCCAAACCTTGGGAGATTCCTTAA

Coding sequence (CDS)

ATGGCAGTCGCGAACCTCCACAGGCTCCGCCAAATCCACCGTCTGCCGGCGATTAGCTACTCAATTTTCACAAGAGGGTCAGCGTCGGCCGTCGCCTCGTCGGAAACCCCATCGTCCTCGTCCAAAAAGGTGTCAGATCGCATCGTCAAACTGTTCGCGATTGATCCGGAGGGCACGAAGAAGGAGATTGTCGGATTGACCGGGCAGACTCTTCTGAAGGCGCTCGCTAATCGGGGTCTGATTGACCCCGAATCCCATCGATTGGAAGACATCAGCGCGTGTTCGGCCGAATGCGAGGTCAGTATCGCTCAGGAGTGGCTCGAGAAGCTGCCGCCGCGGTCCTACGATGAGGAGTATGTGCTGAAGAGAAATTCTAGGGTTAGGGCTTTGAACAAGCACTCGAGGCTGGGCTGCCAGGTTATTCTCACCCCCGACCTTCAAGGTATGGTTGTTGCTGTCCCCGAGCCCAAACCTTGGGAGATTCCTTAA

Protein sequence

MAVANLHRLRQIHRLPAISYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP

Homology

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BLAST of Carg05109 vs. NCBI nr
Match: XP_022960553.1 (uncharacterized protein LOC111461255 [Cucurbita moschata])

HSP 1 Score: 315.8 bits (808), Expect = 8.2e-83
Identity = 161/162 (99.38%), Postives = 161/162 (99.38%), Query Frame = 0


Query: 1   MAVANLHRLRQIHRLPAISYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTK 60
           MAVANLHR RQIHRLPAISYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTK
Sbjct: 1   MAVANLHRFRQIHRLPAISYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTK 60

Query: 61  KEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYDEEYV 120
           KEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYDEEYV
Sbjct: 61  KEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYDEEYV 120

Query: 121 LKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP 163
           LKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP
Sbjct: 121 LKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP 162

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BLAST of Carg05109 vs. NCBI nr
Match: XP_023004798.1 (uncharacterized protein LOC111497990 [Cucurbita maxima] >XP_023513596.1 uncharacterized protein LOC111778155 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 312.4 bits (799), Expect = 9.1e-82
Identity = 162/164 (98.78%), Postives = 162/164 (98.78%), Query Frame = 0


Query: 1   MAVANLHRLRQIHRLPAISY--SIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEG 60
           MAVANLHRLRQIHRLPAISY  SIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEG
Sbjct: 1   MAVANLHRLRQIHRLPAISYSKSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEG 60

Query: 61  TKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYDEE 120
           TKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYDEE
Sbjct: 61  TKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYDEE 120

Query: 121 YVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP 163
           YVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP
Sbjct: 121 YVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP 164

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BLAST of Carg05109 vs. NCBI nr
Match: XP_023548565.1 (uncharacterized protein LOC111807194 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 284.6 bits (727), Expect = 2.0e-73
Identity = 148/164 (90.24%), Postives = 155/164 (94.51%), Query Frame = 0


Query: 1   MAVANLHRLRQIHRLPAISY--SIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEG 60
           MAV NLHRLRQIHRLPAISY  SIF+R SASA AS+E   SSSKKVSDRIVKLFAIDPEG
Sbjct: 1   MAVGNLHRLRQIHRLPAISYSKSIFSRWSASAAASTE---SSSKKVSDRIVKLFAIDPEG 60

Query: 61  TKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYDEE 120
           TKKE+VGLTGQTLLKALANRGLIDP+SHRLE+I ACSAECEVSIAQEWLEKLPPRSYDEE
Sbjct: 61  TKKEVVGLTGQTLLKALANRGLIDPDSHRLENIDACSAECEVSIAQEWLEKLPPRSYDEE 120

Query: 121 YVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP 163
           YVLKRNSRVRALNKHSRLGCQVILTP+LQGMVVAVPEPKPW+IP
Sbjct: 121 YVLKRNSRVRALNKHSRLGCQVILTPELQGMVVAVPEPKPWDIP 161

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BLAST of Carg05109 vs. NCBI nr
Match: XP_022143537.1 (uncharacterized protein LOC111013414 [Momordica charantia])

HSP 1 Score: 280.4 bits (716), Expect = 3.8e-72
Identity = 142/164 (86.59%), Postives = 155/164 (94.51%), Query Frame = 0


Query: 1   MAVANLHRLRQIHRLPAISY--SIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEG 60
           MAVANLHRLRQ +RLPAISY  SIF+R SASAVA+S   SSSS+KVSDRIVKLFAIDPEG
Sbjct: 1   MAVANLHRLRQFNRLPAISYSKSIFSRWSASAVAASPESSSSSRKVSDRIVKLFAIDPEG 60

Query: 61  TKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYDEE 120
           T++E+VGLTGQTLLKALANRGLIDP+SHRLE+I ACSAECEVSIA+EWLEKLPPRSYDEE
Sbjct: 61  TRREVVGLTGQTLLKALANRGLIDPDSHRLEEIDACSAECEVSIAEEWLEKLPPRSYDEE 120

Query: 121 YVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP 163
           YVLKR+SRVR LNKHSRLGCQV+LTPDLQGMVVAVPEPKPW+IP
Sbjct: 121 YVLKRSSRVRVLNKHSRLGCQVVLTPDLQGMVVAVPEPKPWDIP 164

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BLAST of Carg05109 vs. NCBI nr
Match: XP_004148948.1 (PREDICTED: adrenodoxin-like protein, mitochondrial [Cucumis sativus] >KGN44722.1 hypothetical protein Csa_7G374650 [Cucumis sativus])

HSP 1 Score: 266.9 bits (681), Expect = 4.4e-68
Identity = 137/164 (83.54%), Postives = 146/164 (89.02%), Query Frame = 0


Query: 1   MAVANLHRLRQIHRLPAISYS--IFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEG 60
           MAVANLHRLRQIHRLPAI+YS  IF+R SASA  S E  SSSSKKVSDR +KLFA D EG
Sbjct: 1   MAVANLHRLRQIHRLPAITYSKTIFSRWSASATTSLEHSSSSSKKVSDRTIKLFAYDLEG 60

Query: 61  TKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYDEE 120
           TKKEIVGLTGQTLLKALANRGLIDP+SHRLE I ACSAECEV IAQ+W+ KLPPRSYDEE
Sbjct: 61  TKKEIVGLTGQTLLKALANRGLIDPDSHRLEQIDACSAECEVRIAQDWINKLPPRSYDEE 120

Query: 121 YVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP 163
           YVLKRNSR R LNK+SRLGCQVILTPDL+GMVV VPEPKPW+IP
Sbjct: 121 YVLKRNSRARTLNKNSRLGCQVILTPDLEGMVVVVPEPKPWDIP 164

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BLAST of Carg05109 vs. TAIR10
Match: AT3G07480.1 (2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 216.9 bits (551), Expect = 9.5e-57
Identity = 109/152 (71.71%), Postives = 128/152 (84.21%), Query Frame = 0


Query: 11  QIHRLPAISYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQT 70
           QIHRL   + S+  R SA+   S+ +PS  SKKVSDRIVKL AIDP+G K++I+GL+GQT
Sbjct: 11  QIHRLSPFTRSLIVRTSAT---SAPSPSLGSKKVSDRIVKLSAIDPDGYKQDIIGLSGQT 70

Query: 71  LLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYDEEYVLKRNSRVRAL 130
           LL+AL + GLIDP SHRL+DI ACSAECEV IA+EWLEKLPPR+YDEEYVLKR+SR R L
Sbjct: 71  LLRALTHTGLIDPASHRLDDIEACSAECEVQIAEEWLEKLPPRTYDEEYVLKRSSRSRIL 130

Query: 131 NKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP 163
           NKHSRLGCQV+LT +LQGMVVAVPE KPW+IP
Sbjct: 131 NKHSRLGCQVVLTQELQGMVVAVPEAKPWDIP 159

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BLAST of Carg05109 vs. TAIR10
Match: AT4G05450.1 (mitochondrial ferredoxin 1)

HSP 1 Score: 42.4 bits (98), Expect = 3.2e-04
Identity = 46/158 (29.11%), Postives = 73/158 (46.20%), Query Frame = 0


Query: 5   NLHR--------LRQIHRLPAISYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDP 64
           NLHR        L  + R    S   +   S     SS T S +  + +++I  +F +D 
Sbjct: 30  NLHRSYGHYLQSLPVVPRQARTSQEAWFLKSHKFCTSSTTSSENGDEETEKITIIF-VDK 89

Query: 65  EGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYD 124
           +G +  +    G ++L+A A+   ID E    E   ACS    + +  E+  KL   + +
Sbjct: 90  DGEEIPVKVPIGMSVLEA-AHENDIDLEG-ACEASLACSTCHVIVMDTEYYNKLEEPTDE 149

Query: 125 EEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVP 155
           E  +L        L + SRLGCQVI  P+L G+ +A+P
Sbjct: 150 ENDML---DLAFGLTETSRLGCQVIARPELDGVRLAIP 181

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BLAST of Carg05109 vs. Swiss-Prot
Match: sp|Q6P4F2|FDX2_HUMAN (Ferredoxin-2, mitochondrial OS=Homo sapiens OX=9606 GN=FDX2 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.0e-07
Identity = 36/108 (33.33%), Postives = 58/108 (53.70%), Query Frame = 0


Query: 48  IVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWL 107
           +V +  +D  G +  + G  G  +L  LA R  +D E    E   ACS  C V ++++ L
Sbjct: 67  VVNVVFVDRSGQRIPVSGRVGDNVLH-LAQRHGVDLEG-ACEASLACST-CHVYVSEDHL 126

Query: 108 EKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPE 156
           + LPP    E+ +L        L ++SRLGCQ++LTP+L+G    +P+
Sbjct: 127 DLLPPPEEREDDML---DMAPLLQENSRLGCQIVLTPELEGAEFTLPK 168

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BLAST of Carg05109 vs. Swiss-Prot
Match: sp|Q9CPW2|FDX2_MOUSE (Ferredoxin-2, mitochondrial OS=Mus musculus OX=10090 GN=Fdx2 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.0e-07
Identity = 38/118 (32.20%), Postives = 64/118 (54.24%), Query Frame = 0


Query: 38  SSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAE 97
           ++ S ++   +V +  +D  G +  + G  G  +L  LA R  +D E    E   ACS  
Sbjct: 48  AADSPELPRDVVNVVFVDRSGKRIPVRGKVGDNVL-YLAQRHGVDLEG-ACEASLACST- 107

Query: 98  CEVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPE 156
           C V +++  L+ LPP    E+ +L        L ++SRLGCQ++LTP+L+G+  A+P+
Sbjct: 108 CHVYVSEAHLDLLPPPEEREDDML---DMAPLLQENSRLGCQIVLTPELEGVEFALPK 159

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BLAST of Carg05109 vs. Swiss-Prot
Match: sp|P43493|THCC_RHOER (Rhodocoxin OS=Rhodococcus erythropolis OX=1833 GN=thcC PE=1 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 8.6e-07
Identity = 32/102 (31.37%), Postives = 55/102 (53.92%), Query Frame = 0


Query: 54  IDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPR 113
           + P+GTK E+   TG+ +++A    G ID         + C A C V +   W +K P  
Sbjct: 7   VHPDGTKHEVEVPTGKRVMQAAIGAG-IDGIVAECGGQAMC-ATCHVYVESPWADKFPSI 66

Query: 114 SYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPE 156
           S +E+ +L  +  V    + SRL CQ++++ D+ G++V +PE
Sbjct: 67  SEEEDEML--DDTVSPRTEASRLSCQLVVSDDVDGLIVRLPE 104

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BLAST of Carg05109 vs. Swiss-Prot
Match: sp|Q05B51|FDX2_BOVIN (Ferredoxin-2, mitochondrial OS=Bos taurus OX=9913 GN=FDX2 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.1e-06
Identity = 44/140 (31.43%), Postives = 70/140 (50.00%), Query Frame = 0


Query: 16  PAISYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKAL 75
           PAI+      GS  A    E  +   ++  D +V +  +D  G +  + G  G  +L  L
Sbjct: 42  PAIARKFRATGSRPA---GEEEAGGPERPGD-VVNVVFVDRSGQRIPVSGRVGDNVLH-L 101

Query: 76  ANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSR 135
           A R  +D E    E   ACS  C V ++++ L+ LPP    E+ +L        L ++SR
Sbjct: 102 AQRHGLDLEG-ACEASLACST-CHVYVSEDHLDLLPPPDEREDDML---DMAPLLQENSR 161

Query: 136 LGCQVILTPDLQGMVVAVPE 156
           LGCQ++LTP+L+G    +P+
Sbjct: 162 LGCQIVLTPELEGAEFTLPK 171

[Close]

BLAST of Carg05109 vs. Swiss-Prot
Match: sp|P37193|ADXH_DROME (Adrenodoxin-like protein, mitochondrial OS=Drosophila melanogaster OX=7227 GN=Fdxh PE=2 SV=3)

HSP 1 Score: 53.1 bits (126), Expect = 3.3e-06
Identity = 35/113 (30.97%), Postives = 61/113 (53.98%), Query Frame = 0


Query: 43  KVSDRIVKLFAIDPEGTKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSI 102
           K +D IV +  +D +G + ++ G  G  +L  LA+R  I+ E    E   AC+  C V +
Sbjct: 51  KSTDEIVNITYVDKDGKRTKVQGKVGDNVL-YLAHRHGIEMEG-ACEASLACTT-CHVYV 110

Query: 103 AQEWLEKLPPRSYDEEYVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPE 156
             ++L+KL      E+ +L        L ++SRLGCQ++L   ++GM + +P+
Sbjct: 111 QHDYLQKLKEAEEQEDDLL---DMAPFLRENSRLGCQILLDKSMEGMELELPK 157

[Close]

BLAST of Carg05109 vs. TrEMBL
Match: tr|A0A1S3BQZ7|A0A1S3BQZ7_CUCME (rhodocoxin OS=Cucumis melo OX=3656 GN=LOC103492583 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 2.9e-68
Identity = 135/164 (82.32%), Postives = 148/164 (90.24%), Query Frame = 0


Query: 1   MAVANLHRLRQIHRLPAISYS--IFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEG 60
           MAVANLHRLRQIHRLPAI+YS  IF+R SASA  S E  SSSSKKVSDR +KLFA DPEG
Sbjct: 1   MAVANLHRLRQIHRLPAITYSKTIFSRWSASATTSLEHSSSSSKKVSDRAIKLFAYDPEG 60

Query: 61  TKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYDEE 120
           TKKEIVGLTGQTLLKALANRGLIDP+SHRLE+I ACSAECEV IAQ+W++KLPPRSYDEE
Sbjct: 61  TKKEIVGLTGQTLLKALANRGLIDPDSHRLEEIDACSAECEVRIAQDWIDKLPPRSYDEE 120

Query: 121 YVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP 163
           Y+LK+ SR R LNK+SRLGCQVILTPDL+GMVV VPEPKPW+IP
Sbjct: 121 YLLKKYSRARTLNKNSRLGCQVILTPDLEGMVVVVPEPKPWDIP 164

[Close]

BLAST of Carg05109 vs. TrEMBL
Match: tr|A0A0A0K8M3|A0A0A0K8M3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G374650 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 2.9e-68
Identity = 137/164 (83.54%), Postives = 146/164 (89.02%), Query Frame = 0


Query: 1   MAVANLHRLRQIHRLPAISYS--IFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEG 60
           MAVANLHRLRQIHRLPAI+YS  IF+R SASA  S E  SSSSKKVSDR +KLFA D EG
Sbjct: 1   MAVANLHRLRQIHRLPAITYSKTIFSRWSASATTSLEHSSSSSKKVSDRTIKLFAYDLEG 60

Query: 61  TKKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYDEE 120
           TKKEIVGLTGQTLLKALANRGLIDP+SHRLE I ACSAECEV IAQ+W+ KLPPRSYDEE
Sbjct: 61  TKKEIVGLTGQTLLKALANRGLIDPDSHRLEQIDACSAECEVRIAQDWINKLPPRSYDEE 120

Query: 121 YVLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP 163
           YVLKRNSR R LNK+SRLGCQVILTPDL+GMVV VPEPKPW+IP
Sbjct: 121 YVLKRNSRARTLNKNSRLGCQVILTPDLEGMVVVVPEPKPWDIP 164

[Close]

BLAST of Carg05109 vs. TrEMBL
Match: tr|A0A1R3IUY6|A0A1R3IUY6_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_09605 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 2.2e-60
Identity = 122/163 (74.85%), Postives = 142/163 (87.12%), Query Frame = 0


Query: 1   MAVANLHRL-RQIHRLPAISYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGT 60
           MA++ L +L  QIHRLP++S  I TR  +SA ++S + S+SSKKV+DRIVKLFAIDPEG 
Sbjct: 1   MAISTLQKLSSQIHRLPSLSAHILTR--SSATSASPSASTSSKKVADRIVKLFAIDPEGQ 60

Query: 61  KKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYDEEY 120
           K+E+VGLTGQTLL+AL N GLIDP SHRLE+I ACSAECEV+IAQEWLE+LPPR+YDEEY
Sbjct: 61  KREVVGLTGQTLLRALTNSGLIDPASHRLEEIDACSAECEVNIAQEWLERLPPRTYDEEY 120

Query: 121 VLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP 163
           VL RNSR R LNKHSRLGCQV+LTP LQGMVVAVPEPKPW+IP
Sbjct: 121 VLVRNSRGRILNKHSRLGCQVVLTPQLQGMVVAVPEPKPWDIP 161

[Close]

BLAST of Carg05109 vs. TrEMBL
Match: tr|A0A1R3KLJ5|A0A1R3KLJ5_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_06931 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.9e-60
Identity = 122/163 (74.85%), Postives = 142/163 (87.12%), Query Frame = 0


Query: 1   MAVANLHRL-RQIHRLPAISYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGT 60
           MA++ L +L  QIHRLP++S  I TR  +SA ++S + S+SSKKV+DRIVKLFAIDPEG 
Sbjct: 1   MAISTLQKLSSQIHRLPSLSAHILTR--SSATSASPSASTSSKKVADRIVKLFAIDPEGQ 60

Query: 61  KKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYDEEY 120
           K+E+VGLTGQTLL+AL N GLIDP SHRLE+I ACSAECEV+IAQEWLE+LPPR+YDEEY
Sbjct: 61  KREVVGLTGQTLLRALINSGLIDPASHRLEEIDACSAECEVNIAQEWLERLPPRTYDEEY 120

Query: 121 VLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP 163
           VL RNSR R LNKHSRLGCQV+LTP LQGMVVAVPEPKPW+IP
Sbjct: 121 VLVRNSRGRILNKHSRLGCQVVLTPQLQGMVVAVPEPKPWDIP 161

[Close]

BLAST of Carg05109 vs. TrEMBL
Match: tr|A0A0D2QTR6|A0A0D2QTR6_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G160300 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 7.2e-59
Identity = 120/163 (73.62%), Postives = 138/163 (84.66%), Query Frame = 0


Query: 1   MAVANLHRL-RQIHRLPAISYSIFTRGSASAVASSETPSSSSKKVSDRIVKLFAIDPEGT 60
           MA++ L +L  QIHRLP++S  I TR SA+  +S     SSSKKV+DR+VKLFAIDPEG 
Sbjct: 1   MAISTLQKLTSQIHRLPSLSSQILTRSSATLTSS----PSSSKKVADRLVKLFAIDPEGQ 60

Query: 61  KKEIVGLTGQTLLKALANRGLIDPESHRLEDISACSAECEVSIAQEWLEKLPPRSYDEEY 120
           K+E+VGL GQTLL+AL N GLIDP+SHRLE+I ACSAECEV+IAQEWLEKLPPR+YDEEY
Sbjct: 61  KREVVGLAGQTLLRALTNSGLIDPDSHRLEEIDACSAECEVNIAQEWLEKLPPRTYDEEY 120

Query: 121 VLKRNSRVRALNKHSRLGCQVILTPDLQGMVVAVPEPKPWEIP 163
           VL RNSR R LNKHSRLGCQV+LTP LQGMVVAVPE KPW+IP
Sbjct: 121 VLVRNSRGRILNKHSRLGCQVVLTPQLQGMVVAVPEAKPWDIP 159

The following BLAST results are available for this feature:

BLAST of Carg05109 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960553.1	8.2e-83	99.38	uncharacterized protein LOC111461255 [Cucurbita moschata]	[more]
XP_023004798.1	9.1e-82	98.78	uncharacterized protein LOC111497990 [Cucurbita maxima] >XP_023513596.1 uncharac...	[more]
XP_023548565.1	2.0e-73	90.24	uncharacterized protein LOC111807194 [Cucurbita pepo subsp. pepo]	[more]
XP_022143537.1	3.8e-72	86.59	uncharacterized protein LOC111013414 [Momordica charantia]	[more]
XP_004148948.1	4.4e-68	83.54	PREDICTED: adrenodoxin-like protein, mitochondrial [Cucumis sativus] >KGN44722.1...	[more]

BLAST of Carg05109 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07480.1	9.5e-57	71.71	2Fe-2S ferredoxin-like superfamily protein	[more]
AT4G05450.1	3.2e-04	29.11	mitochondrial ferredoxin 1	[more]

BLAST of Carg05109 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6P4F2\|FDX2_HUMAN	5.0e-07	33.33	Ferredoxin-2, mitochondrial OS=Homo sapiens OX=9606 GN=FDX2 PE=1 SV=1	[more]
sp\|Q9CPW2\|FDX2_MOUSE	5.0e-07	32.20	Ferredoxin-2, mitochondrial OS=Mus musculus OX=10090 GN=Fdx2 PE=1 SV=1	[more]
sp\|P43493\|THCC_RHOER	8.6e-07	31.37	Rhodocoxin OS=Rhodococcus erythropolis OX=1833 GN=thcC PE=1 SV=2	[more]
sp\|Q05B51\|FDX2_BOVIN	1.1e-06	31.43	Ferredoxin-2, mitochondrial OS=Bos taurus OX=9913 GN=FDX2 PE=2 SV=1	[more]
sp\|P37193\|ADXH_DROME	3.3e-06	30.97	Adrenodoxin-like protein, mitochondrial OS=Drosophila melanogaster OX=7227 GN=Fd...	[more]

BLAST of Carg05109 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BQZ7\|A0A1S3BQZ7_CUCME	2.9e-68	82.32	rhodocoxin OS=Cucumis melo OX=3656 GN=LOC103492583 PE=4 SV=1	[more]
tr\|A0A0A0K8M3\|A0A0A0K8M3_CUCSA	2.9e-68	83.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G374650 PE=4 SV=1	[more]
tr\|A0A1R3IUY6\|A0A1R3IUY6_COCAP	2.2e-60	74.85	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_09605 PE=4 ...	[more]
tr\|A0A1R3KLJ5\|A0A1R3KLJ5_9ROSI	2.9e-60	74.85	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_06931 PE=4 SV=1	[more]
tr\|A0A0D2QTR6\|A0A0D2QTR6_GOSRA	7.2e-59	73.62	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G160300 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0051536	iron-sulfur cluster binding
GO:0009055	electron carrier activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036010	2Fe-2S_ferredoxin-like_sf
IPR001041	2Fe-2S_ferredoxin-type
IPR012675	Beta-grasp_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0051536	iron-sulfur cluster binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05109-RA	Carg05109-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012675	Beta-grasp domain superfamily	GENE3D	G3DSA:3.10.20.30		coord: 29..157 e-value: 3.3E-23 score: 83.7
None	No IPR available	PANTHER	PTHR23426	FERREDOXIN/ADRENODOXIN	coord: 1..162
None	No IPR available	PANTHER	PTHR23426:SF35	2FE-2S FERREDOXIN-LIKE PROTEIN	coord: 1..162
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 54..146 e-value: 0.00940749 score: 31.5964
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	SSF54292	2Fe-2S ferredoxin-like	coord: 49..154

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05109	Cla014843	Watermelon (97103) v1	carwmB0079
Carg05109	Csa7G374650	Cucumber (Chinese Long) v2	carcuB0095
Carg05109	MELO3C015717	Melon (DHL92) v3.5.1	carmeB0084
Carg05109	ClCG09G007890	Watermelon (Charleston Gray)	carwcgB0080
Carg05109	CSPI07G15420	Wild cucumber (PI 183967)	carcpiB0099
Carg05109	Cucsa.388360	Cucumber (Gy14) v1	carcgyB0104
Carg05109	CmaCh17G013320	Cucurbita maxima (Rimu)	carcmaB0104
Carg05109	CmaCh08G002840	Cucurbita maxima (Rimu)	carcmaB0112
Carg05109	CmoCh08G002830	Cucurbita moschata (Rifu)	carcmoB0119
Carg05109	CmoCh17G012990	Cucurbita moschata (Rifu)	carcmoB0112
Carg05109	Lsi02G021980	Bottle gourd (USVL1VR-Ls)	carlsiB074
Carg05109	Cp4.1LG17g05880	Cucurbita pepo (Zucchini)	carcpeB0126
Carg05109	MELO3C015717.2	Melon (DHL92) v3.6.1	carmedB0085
Carg05109	CsaV3_7G027180	Cucumber (Chinese Long) v3	carcucB0102
Carg05109	Cla97C09G170490	Watermelon (97103) v2	carwmbB0085
Carg05109	Bhi09G000984	Wax gourd	carwgoB0098

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg05109	Carg11510	Silver-seed gourd	carcarB009

The following block(s) are covering this gene:


Gene	Organism	Block
Carg05109	Cucumber (Gy14) v2	carcgybB0095
Carg05109	Cucurbita pepo (Zucchini)	carcpeB0116