Carg06112 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAAGAAACTCTTACAAAGAATGCCATCATCACTATCATCATCGTCATCATGCCCGTCACTCCACGAGTCGGAGGACGAGCTTAAACACATGCCATTGGCACCGCCGCGCCAAAAGAACAAGAAGCGTTTGTCGAAGCAACTTTCAATGTGCGAGACACCAAGAGACCTCGCATGGGAGAAGCGACGACGACAAATGCTCCGCCCAAGGAACGCGTCAACCGATAGAGATGACTTGACTGATGAGGATTGGAATGAGCTCAAAGGTTGTATTGAGCTAGGGTTTGCATTCAAAGAGGAAGATGGTCACAAACTATGTGGTACATTACCAGCCCTTGACCTTTACTTCGCCGTTAACCGACAGCTTTCTCCGAGCCCAGTGTCTACACCCCATAGCAGCACCTCGTCGTCATCTCTCGGCGCAAGGTCTTCATCGTTCGAGAGCCCCAAAAGTGAGTCTGAGACATGGAGGGTTTGCAGTCCAGGTATATGAACATAACTATTGTTAATATGTTAGAAATTACGAATCTTCATTGGTATGAGACCTAATCCATGAGAGGTTATGCTCGAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCGTGTAACAAAATAAAGCTAACTTTGAGTCGAATTTCAATGGATTTAGGGGAAGATCCAAAGCAAGTGAAGGCAAAATTGAGACATTGGGCACAAGCTGTGGCATGTTCGGTGATGCAATCATTGGGAGAACATAAAGGGAAATTTTGAGGAAAGATATTGTACAGAGCAGAGGAGTAA ATGGACAAGAAACTCTTACAAAGAATGCCATCATCACTATCATCATCGTCATCATGCCCGTCACTCCACGAGTCGGAGGACGAGCTTAAACACATGCCATTGGCACCGCCGCGCCAAAAGAACAAGAAGCGTTTGTCGAAGCAACTTTCAATGTGCGAGACACCAAGAGACCTCGCATGGGAGAAGCGACGACGACAAATGCTCCGCCCAAGGAACGCGTCAACCGATAGAGATGACTTGACTGATGAGGATTGGAATGAGCTCAAAGGTTGTATTGAGCTAGGGTTTGCATTCAAAGAGGAAGATGGTCACAAACTATGTGGTACATTACCAGCCCTTGACCTTTACTTCGCCGTTAACCGACAGCTTTCTCCGAGCCCAGTGTCTACACCCCATAGCAGCACCTCGTCGTCATCTCTCGGCGCAAGAGCAGAGGAGTAA ATGGACAAGAAACTCTTACAAAGAATGCCATCATCACTATCATCATCGTCATCATGCCCGTCACTCCACGAGTCGGAGGACGAGCTTAAACACATGCCATTGGCACCGCCGCGCCAAAAGAACAAGAAGCGTTTGTCGAAGCAACTTTCAATGTGCGAGACACCAAGAGACCTCGCATGGGAGAAGCGACGACGACAAATGCTCCGCCCAAGGAACGCGTCAACCGATAGAGATGACTTGACTGATGAGGATTGGAATGAGCTCAAAGGTTGTATTGAGCTAGGGTTTGCATTCAAAGAGGAAGATGGTCACAAACTATGTGGTACATTACCAGCCCTTGACCTTTACTTCGCCGTTAACCGACAGCTTTCTCCGAGCCCAGTGTCTACACCCCATAGCAGCACCTCGTCGTCATCTCTCGGCGCAAGAGCAGAGGAGTAA MDKKLLQRMPSSLSSSSSCPSLHESEDELKHMPLAPPRQKNKKRLSKQLSMCETPRDLAWEKRRRQMLRPRNASTDRDDLTDEDWNELKGCIELGFAFKEEDGHKLCGTLPALDLYFAVNRQLSPSPVSTPHSSTSSSSLGARAEE
BLAST of Carg06112 vs. NCBI nr
Match: XP_022960867.1 (uncharacterized protein LOC111461542 [Cucurbita moschata]) HSP 1 Score: 283.5 bits (724), Expect = 4.1e-73 Identity = 142/144 (98.61%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of Carg06112 vs. NCBI nr
Match: XP_023533045.1 (uncharacterized protein LOC111795047 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 283.5 bits (724), Expect = 4.1e-73 Identity = 142/144 (98.61%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of Carg06112 vs. NCBI nr
Match: XP_022987465.1 (uncharacterized protein LOC111485003 [Cucurbita maxima]) HSP 1 Score: 280.8 bits (717), Expect = 2.6e-72 Identity = 141/144 (97.92%), Postives = 142/144 (98.61%), Query Frame = 0
BLAST of Carg06112 vs. NCBI nr
Match: XP_008462705.1 (PREDICTED: uncharacterized protein LOC103501007 [Cucumis melo]) HSP 1 Score: 264.2 bits (674), Expect = 2.6e-67 Identity = 133/144 (92.36%), Postives = 136/144 (94.44%), Query Frame = 0
BLAST of Carg06112 vs. NCBI nr
Match: XP_004142530.1 (PREDICTED: uncharacterized protein LOC101212719 [Cucumis sativus] >KGN66785.1 hypothetical protein Csa_1G690230 [Cucumis sativus]) HSP 1 Score: 254.6 bits (649), Expect = 2.0e-64 Identity = 132/145 (91.03%), Postives = 135/145 (93.10%), Query Frame = 0
BLAST of Carg06112 vs. TAIR10
Match: AT1G08790.1 (Protein of unknown function (DUF1685)) HSP 1 Score: 136.7 bits (343), Expect = 1.1e-32 Identity = 85/135 (62.96%), Postives = 98/135 (72.59%), Query Frame = 0
BLAST of Carg06112 vs. TAIR10
Match: AT5G28690.1 (Protein of unknown function (DUF1685)) HSP 1 Score: 127.9 bits (320), Expect = 5.2e-30 Identity = 77/122 (63.11%), Postives = 85/122 (69.67%), Query Frame = 0
BLAST of Carg06112 vs. TAIR10
Match: AT3G04700.1 (Protein of unknown function (DUF1685)) HSP 1 Score: 121.7 bits (304), Expect = 3.7e-28 Identity = 67/97 (69.07%), Postives = 73/97 (75.26%), Query Frame = 0
BLAST of Carg06112 vs. TAIR10
Match: AT2G31560.1 (Protein of unknown function (DUF1685)) HSP 1 Score: 58.9 bits (141), Expect = 3.0e-09 Identity = 29/68 (42.65%), Postives = 46/68 (67.65%), Query Frame = 0
BLAST of Carg06112 vs. TAIR10
Match: AT2G43340.1 (Protein of unknown function (DUF1685)) HSP 1 Score: 55.1 bits (131), Expect = 4.3e-08 Identity = 22/43 (51.16%), Postives = 34/43 (79.07%), Query Frame = 0
BLAST of Carg06112 vs. TrEMBL
Match: tr|A0A1S3CHL5|A0A1S3CHL5_CUCME (uncharacterized protein LOC103501007 OS=Cucumis melo OX=3656 GN=LOC103501007 PE=4 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 1.7e-67 Identity = 133/144 (92.36%), Postives = 136/144 (94.44%), Query Frame = 0
BLAST of Carg06112 vs. TrEMBL
Match: tr|A0A0A0LY38|A0A0A0LY38_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690230 PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 1.3e-64 Identity = 132/145 (91.03%), Postives = 135/145 (93.10%), Query Frame = 0
BLAST of Carg06112 vs. TrEMBL
Match: tr|A0A2N9FTF3|A0A2N9FTF3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18390 PE=4 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 7.7e-44 Identity = 96/128 (75.00%), Postives = 108/128 (84.38%), Query Frame = 0
BLAST of Carg06112 vs. TrEMBL
Match: tr|A0A2C9VIF4|A0A2C9VIF4_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G136100 PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 2.5e-42 Identity = 97/130 (74.62%), Postives = 105/130 (80.77%), Query Frame = 0
BLAST of Carg06112 vs. TrEMBL
Match: tr|M5W1A3|M5W1A3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G344900 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 2.3e-40 Identity = 97/144 (67.36%), Postives = 111/144 (77.08%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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