Carg23588-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACAATCCACTCCCTTTGGGGCCCAATGTCCTCGCTGACACTCTTCCTCTCTCCAATTGATGTGGGATCTCACACAATTGCTTTCAGGATGTAGAAGAATGGGAATGGTTGAAAGGTTGTTAGAACGGTTTCTTTGGCTGCTGTTACAAACACAACTTAGGTGAACATTTTGAGGAAAAAGCAGTGATCTAGTAGAGATTCATGGTATTGTAACTTTCCATTTCAGTGTCATTCTTGTCCAATTGTGGAAGGGTCCTATAATTTGAGGAGGGCACATGCCCCCGCTGGCCCCAATATGATCTGCCCTTGCATGAATTCTTCTTTTGTCTTCTATTATCGTTTATGGGACGTTTTTTGGGACGCCCTGAGTGTCTTCTTTGAAGCTATCCCGCTTAATATTTTATTACTATCTCTTAAACTATTGCATCTTGAGAGAACAGGAGTGTAGATGAAGAGAGCTATATTGGAGCAAATGATGTTATGTTTGAAGTCAATGAGACTACAAATACCTCAGAAGCTAAGGAAAATATCAGTGTAGAGCCATGTCCTATATCTTGTACAGATTTTTCAGCCGCCCTATATGTGAAAGAGACGGAACAGGAGACCGTTGAGGACTCCAATTTAAATCTAAAAGGTGAAGATGGCTATAACGAGCTACTCAAGCAGTATTACGAGCTTGAGGAGAAGAGGCAGAAGGTTCTAGAACAGCTTTATCAATGTGGTGCTGGTGGTTGGAACTACCAGGATGTCGGTGCAGGGTCTGACATTGGAAATCAATGGGGAACATCTGCTGCTTATCAAGAACACCCAGTCTCTGCAAGCCAACCTTCTCTTAACCAGACAATACCGTCTTACTCGCCCTCCAGTTATCCAATTTCAGCTGGTATGTGATATCAATTTTATATTTGTTCCTTGTTTGGAATGGCTGTTGGGCATAAGTGTTACCCATTATTCATACATTGGCTACAGGTCCTCAAAGTTCGTCCCATGCTGATGGTGACATAATCAAAACTGCAATGGATTCTGCAGCAAGAGCTATATCGTCCATAAAGACTGTAAATAAAGGTTGGCATGATTTTATGGAGCCTGAATGAATCTCTTCAGATTATCTGCATTTCTTTTTATTCTATGATTGAAGATTCCTTTTATGTATGCTCTGATGACATAGATGTTTTGAACAAGTAACAAAATTTGTATTAGAAAAAACATCATGAACATGATGTTCACTAGAAAACATGAACTAGAGGCAACAAAATATGTCAAAGGGGGCATGAAAATACCTCCCCCCCCCCCCTCCCCAAGAATCAATACAAAGCAAAACTGTAACGACCCAAATCCACCGCTAGCAGATATTGTCTTCTTTGGGCTTTCCCTTTCGGACTTCCCCTCAAGGCTTTAAAACGCGTCTGCTAGAGGAAGGTTTCCTCACCCTTATAAAGAGTGTTTTGTTCTCCTCCCCAACCAATGTAGGACATCACAATCCACCCCCCTTCGGGGCCAAGCGTCCTCGTTGGCACTCTTTCTTTTCTCCAATCGATGTGGGACCACCACCAAATCCACCCCCCTTTGGGGCCCAACATCCTTACTGGCACACCACCTCGTGTCTATCCCCCTTTGGGGAACAGCGAGAAGGCTGGCACATCGTCCAGTGTCTGGCTCTGATACCATTTGTAACGACCCAGATCCACCACTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCAGGCTTCCCCTCAAGGCTTTAAAACGCGTCTACTAGGGGAAGTTTCCACACCCTTATAAAGGGTATTTTGTTCTCCTCCCCAACCAATGGTATCAGAGCCAGACACCGGACGATGTGCCAGCCTTCTCGTTGTTCCCCGAAGGGGGGTAGACACAAGACGATGTGCTAGTAAGGACGCTGGCCCCAATGGGGGGTGGATTTGGAGGGGGTCCCACATCGATTGGAGAAAGGAACGAGTGCCAGCGAGGACGCTGGGCCCCGAAGGGGGGTGGATTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAAATACCCTTTATAAGGGTGTGGAAACCTTCCCCTAGCAGACGCGTTTTAAAGCCTTGAGGAGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGAATCTGGGTCGTTTGGGTCGTTACAAAAACAAAGCTAATGAAAGAAATTATAATGGCTCTTCTCTTCTCTGCTAAAACTATACAATAAAAAGATGATAAAGTGTATGTCCCTTTGGACGTTTGTATCTAAGGACTTCGTTATTACTCGTTATGTTTTGTTCTTTTGCATTAGATTCCCTTTCAAGGTTTGTTCTTGTCTGGCTCCTACTAGGTTGTTGTTTTTGCACGCCCTCGTGTTGTCCTTGTTTAGTCATGTGCCCCTCGTGTCATATTCGCTTAATGATTATGTGATGAGAATGGACCAAACCACTTGATGCTCATTGTACGATATTGGAACATGTATATTGCTGCAAGCCATCATTTTACCAGTTTCTATATGGTCATCTAGCACATTTCATTTCTATATGATTCTTTAGCTTTAGATAAGATTATGGGGACTTCATGTTTACTGGTTGAGATGTCTAGGTTTTTGTAACAAATGGTGACAGAAAACGTACTAATGAACTTCCCATTAGGCTTTCCTTTACATTGTCTATGTACTTCACGTTTTCATCTTATCCTTTTTAAAACCATCTCTATGCCTAATTGTAACGGTTATTGTAAGATCCCACATTGGTTGAGGAGGAGAACAAAACACCCTTTATAAGGGTGTGGAAACCTCTCTCTAGCAGACGTGTTTTAAAAACCTTGAGGGAAAGTTCGAAAGGTTGAGCCCAAGGAGAACAATATTGGCTAGCAGTCGGCTTGGGGCCTCTACACTAATCCGCCAAAGGAATAGGTGTTGGGCTTTACGTTGCATGATTTGATACCTTGTGACATTTTTGTTTCTTTTTAATCAGTTCACATAGAGAAAGAAAGCGAGGGACATGATGGGATAATGCCTCAAAGGGGTGCTAGCTCTGAAACAGACCTTACTACCGTGTTAAATGCTTGGTATTCTGCAGGCTTCTACACTGGCAAGTGAGTTCTGCTTAGTTTCATTCTCGCTCAAGACATGCGTTATATATTTCTTCTTGTCCACAGCTGTTTCATATTTTATAGTATCTTCCTTCTTTGAAAGAAACACAAAAAGGCCTTCATTTCAAAATTTAATCTGCAGTTTCCTTGACTGAAGTGTTTGTTTGTTTGTTTGTTATATGCTGAAATGAAATGCAAGCATTCAGTTCTCTCAAAACTGATCTGTTTTGCAGATACCTTGTGGAGCAATCTCAGGCCAAGAAATGATGAACACCAGGCTCATCTTACCAATTTCCCCCACTTTTGATACCCACCCATGGCATTTGTGTGCTATGAGTTTGAATTTTGATCTAAATGAGTTTGAATTTGGCGTTTTTTAGAATTTTGATCAAACTAGTTAAGACATATATTCTCGACCAAGAGGTAAGATGTTCAATCTTTTCATTCCACGTGTTGTCGACCCATAAATAGAACTCTGATCAAACTATAGTTCAACTGGTTAAGACATATATTCTCGACCAAGAGGTAAGATGTTCAATCTTTTCATTCCACGTGTTGCTGACCCATAAATAGAACTCTGATCAAACTATAGTTCAACTGGTTAAGACATATATTTTCGACCAAGAGGTAAGATGTTCAAATCTTTTCATTCCATGTGTTATTGAATGA ACAATCCACTCCCTTTGGGGCCCAATGTCCTCGCTGACACTCTTCCTCTCTCCAATTGATGTGGGATCTCACACAATTGCTTTCAGGATGTAGAAGAATGGGAATGGTTGAAAGGTTGTTAGAACGGTTTCTTTGGCTGCTGTTACAAACACAACTTAGGTGAACATTTTGAGGAAAAAGCAGTGATCTAGTAGAGATTCATGGTATTGTAACTTTCCATTTCAGTGTCATTCTTGTCCAATTGTGGAAGGGTCCTATAATTTGAGGAGGGCACATGCCCCCGCTGGCCCCAATATGATCTGCCCTTGCATGAATTCTTCTTTTGTCTTCTATTATCGTTTATGGGACGTTTTTTGGGACGCCCTGAGTGTCTTCTTTGAAGCTATCCCGCTTAATATTTTATTACTATCTCTTAAACTATTGCATCTTGAGAGAACAGGAGTGTAGATGAAGAGAGCTATATTGGAGCAAATGATGTTATGTTTGAAGTCAATGAGACTACAAATACCTCAGAAGCTAAGGAAAATATCAGTGTAGAGCCATGTCCTATATCTTGTACAGATTTTTCAGCCGCCCTATATGTGAAAGAGACGGAACAGGAGACCGTTGAGGACTCCAATTTAAATCTAAAAGGTGAAGATGGCTATAACGAGCTACTCAAGCAGTATTACGAGCTTGAGGAGAAGAGGCAGAAGGTTCTAGAACAGCTTTATCAATGTGGTGCTGGTGGTTGGAACTACCAGGATGTCGGTGCAGGGTCTGACATTGGAAATCAATGGGGAACATCTGCTGCTTATCAAGAACACCCAGTCTCTGCAAGCCAACCTTCTCTTAACCAGACAATACCGTCTTACTCGCCCTCCAGTTATCCAATTTCAGCTGGTCCTCAAAGTTCGTCCCATGCTGATGGTGACATAATCAAAACTGCAATGGATTCTGCAGCAAGAGCTATATCGTCCATAAAGACTGTAAATAAAGTTCACATAGAGAAAGAAAGCGAGGGACATGATGGGATAATGCCTCAAAGGGGTGCTAGCTCTGAAACAGACCTTACTACCGTGTTAAATGCTTGGTATTCTGCAGGCTTCTACACTGGCAAATACCTTGTGGAGCAATCTCAGGCCAAGAAATGATGAACACCAGGCTCATCTTACCAATTTCCCCCACTTTTGATACCCACCCATGGCATTTGTGTGCTATGAGTTTGAATTTTGATCTAAATGAGTTTGAATTTGGCGTTTTTTAGAATTTTGATCAAACTAGTTAAGACATATATTCTCGACCAAGAGGTAAGATGTTCAATCTTTTCATTCCACGTGTTGTCGACCCATAAATAGAACTCTGATCAAACTATAGTTCAACTGGTTAAGACATATATTCTCGACCAAGAGGTAAGATGTTCAATCTTTTCATTCCACGTGTTGCTGACCCATAAATAGAACTCTGATCAAACTATAGTTCAACTGGTTAAGACATATATTTTCGACCAAGAGGTAAGATGTTCAAATCTTTTCATTCCATGTGTTATTGAATGA ATGTTTGAAGTCAATGAGACTACAAATACCTCAGAAGCTAAGGAAAATATCAGTGTAGAGCCATGTCCTATATCTTGTACAGATTTTTCAGCCGCCCTATATGTGAAAGAGACGGAACAGGAGACCGTTGAGGACTCCAATTTAAATCTAAAAGGTGAAGATGGCTATAACGAGCTACTCAAGCAGTATTACGAGCTTGAGGAGAAGAGGCAGAAGGTTCTAGAACAGCTTTATCAATGTGGTGCTGGTGGTTGGAACTACCAGGATGTCGGTGCAGGGTCTGACATTGGAAATCAATGGGGAACATCTGCTGCTTATCAAGAACACCCAGTCTCTGCAAGCCAACCTTCTCTTAACCAGACAATACCGTCTTACTCGCCCTCCAGTTATCCAATTTCAGCTGGTCCTCAAAGTTCGTCCCATGCTGATGGTGACATAATCAAAACTGCAATGGATTCTGCAGCAAGAGCTATATCGTCCATAAAGACTGTAAATAAAGTTCACATAGAGAAAGAAAGCGAGGGACATGATGGGATAATGCCTCAAAGGGGTGCTAGCTCTGAAACAGACCTTACTACCGTGTTAAATGCTTGGTATTCTGCAGGCTTCTACACTGGCAAATACCTTGTGGAGCAATCTCAGGCCAAGAAATGA MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYSAGFYTGKYLVEQSQAKK
BLAST of Carg23588-RA vs. NCBI nr
Match: XP_022923599.1 (uncharacterized protein LOC111431235 [Cucurbita moschata]) HSP 1 Score: 428.3 bits (1100), Expect = 1.5e-116 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of Carg23588-RA vs. NCBI nr
Match: XP_022965362.1 (uncharacterized protein LOC111465241 isoform X2 [Cucurbita maxima]) HSP 1 Score: 415.2 bits (1066), Expect = 1.3e-112 Identity = 210/217 (96.77%), Postives = 213/217 (98.16%), Query Frame = 0
BLAST of Carg23588-RA vs. NCBI nr
Match: XP_023551935.1 (uncharacterized protein LOC111809760 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 411.8 bits (1057), Expect = 1.5e-111 Identity = 209/217 (96.31%), Postives = 211/217 (97.24%), Query Frame = 0
BLAST of Carg23588-RA vs. NCBI nr
Match: XP_022965361.1 (uncharacterized protein LOC111465241 isoform X1 [Cucurbita maxima]) HSP 1 Score: 397.5 bits (1020), Expect = 2.9e-107 Identity = 200/211 (94.79%), Postives = 206/211 (97.63%), Query Frame = 0
BLAST of Carg23588-RA vs. NCBI nr
Match: XP_023551933.1 (uncharacterized protein LOC111809760 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 394.0 bits (1011), Expect = 3.2e-106 Identity = 199/211 (94.31%), Postives = 204/211 (96.68%), Query Frame = 0
BLAST of Carg23588-RA vs. TrEMBL
Match: tr|A0A1S3BL18|A0A1S3BL18_CUCME (uncharacterized protein LOC103490751 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103490751 PE=4 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 2.1e-77 Identity = 165/217 (76.04%), Postives = 178/217 (82.03%), Query Frame = 0
BLAST of Carg23588-RA vs. TrEMBL
Match: tr|A0A1S4DXI5|A0A1S4DXI5_CUCME (uncharacterized protein LOC103490751 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490751 PE=4 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 5.2e-73 Identity = 164/253 (64.82%), Postives = 179/253 (70.75%), Query Frame = 0
BLAST of Carg23588-RA vs. TrEMBL
Match: tr|A0A0A0L6D7|A0A0A0L6D7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G008290 PE=4 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 5.2e-73 Identity = 157/218 (72.02%), Postives = 179/218 (82.11%), Query Frame = 0
BLAST of Carg23588-RA vs. TrEMBL
Match: tr|A0A1S4DXH8|A0A1S4DXH8_CUCME (uncharacterized protein LOC103490751 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490751 PE=4 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 1.5e-72 Identity = 165/256 (64.45%), Postives = 178/256 (69.53%), Query Frame = 0
BLAST of Carg23588-RA vs. TrEMBL
Match: tr|V4V2B3|V4V2B3_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10001787mg PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.5e-27 Identity = 98/245 (40.00%), Postives = 132/245 (53.88%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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