Carg23588 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23588
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Survival motor neuron
Location	Cucurbita_argyrosperma_scaffold_235 : 183322 .. 187087 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAATCCACTCCCTTTGGGGCCCAATGTCCTCGCTGACACTCTTCCTCTCTCCAATTGATGTGGGATCTCACACAATTGCTTTCAGGATGTAGAAGAATGGGAATGGTTGAAAGGTTGTTAGAACGGTTTCTTTGGCTGCTGTTACAAACACAACTTAGGTGAACATTTTGAGGAAAAAGCAGTGATCTAGTAGAGATTCATGGTATTGTAACTTTCCATTTCAGTGTCATTCTTGTCCAATTGTGGAAGGGTCCTATAATTTGAGGAGGGCACATGCCCCCGCTGGCCCCAATATGATCTGCCCTTGCATGAATTCTTCTTTTGTCTTCTATTATCGTTTATGGGACGTTTTTTGGGACGCCCTGAGTGTCTTCTTTGAAGCTATCCCGCTTAATATTTTATTACTATCTCTTAAACTATTGCATCTTGAGAGAACAGGAGTGTAGATGAAGAGAGCTATATTGGAGCAAATGATGTTATGTTTGAAGTCAATGAGACTACAAATACCTCAGAAGCTAAGGAAAATATCAGTGTAGAGCCATGTCCTATATCTTGTACAGATTTTTCAGCCGCCCTATATGTGAAAGAGACGGAACAGGAGACCGTTGAGGACTCCAATTTAAATCTAAAAGGTGAAGATGGCTATAACGAGCTACTCAAGCAGTATTACGAGCTTGAGGAGAAGAGGCAGAAGGTTCTAGAACAGCTTTATCAATGTGGTGCTGGTGGTTGGAACTACCAGGATGTCGGTGCAGGGTCTGACATTGGAAATCAATGGGGAACATCTGCTGCTTATCAAGAACACCCAGTCTCTGCAAGCCAACCTTCTCTTAACCAGACAATACCGTCTTACTCGCCCTCCAGTTATCCAATTTCAGCTGGTATGTGATATCAATTTTATATTTGTTCCTTGTTTGGAATGGCTGTTGGGCATAAGTGTTACCCATTATTCATACATTGGCTACAGGTCCTCAAAGTTCGTCCCATGCTGATGGTGACATAATCAAAACTGCAATGGATTCTGCAGCAAGAGCTATATCGTCCATAAAGACTGTAAATAAAGGTTGGCATGATTTTATGGAGCCTGAATGAATCTCTTCAGATTATCTGCATTTCTTTTTATTCTATGATTGAAGATTCCTTTTATGTATGCTCTGATGACATAGATGTTTTGAACAAGTAACAAAATTTGTATTAGAAAAAACATCATGAACATGATGTTCACTAGAAAACATGAACTAGAGGCAACAAAATATGTCAAAGGGGGCATGAAAATACCTCCCCCCCCCCCCTCCCCAAGAATCAATACAAAGCAAAACTGTAACGACCCAAATCCACCGCTAGCAGATATTGTCTTCTTTGGGCTTTCCCTTTCGGACTTCCCCTCAAGGCTTTAAAACGCGTCTGCTAGAGGAAGGTTTCCTCACCCTTATAAAGAGTGTTTTGTTCTCCTCCCCAACCAATGTAGGACATCACAATCCACCCCCCTTCGGGGCCAAGCGTCCTCGTTGGCACTCTTTCTTTTCTCCAATCGATGTGGGACCACCACCAAATCCACCCCCCTTTGGGGCCCAACATCCTTACTGGCACACCACCTCGTGTCTATCCCCCTTTGGGGAACAGCGAGAAGGCTGGCACATCGTCCAGTGTCTGGCTCTGATACCATTTGTAACGACCCAGATCCACCACTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCAGGCTTCCCCTCAAGGCTTTAAAACGCGTCTACTAGGGGAAGTTTCCACACCCTTATAAAGGGTATTTTGTTCTCCTCCCCAACCAATGGTATCAGAGCCAGACACCGGACGATGTGCCAGCCTTCTCGTTGTTCCCCGAAGGGGGGTAGACACAAGACGATGTGCTAGTAAGGACGCTGGCCCCAATGGGGGGTGGATTTGGAGGGGGTCCCACATCGATTGGAGAAAGGAACGAGTGCCAGCGAGGACGCTGGGCCCCGAAGGGGGGTGGATTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAAATACCCTTTATAAGGGTGTGGAAACCTTCCCCTAGCAGACGCGTTTTAAAGCCTTGAGGAGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGAATCTGGGTCGTTTGGGTCGTTACAAAAACAAAGCTAATGAAAGAAATTATAATGGCTCTTCTCTTCTCTGCTAAAACTATACAATAAAAAGATGATAAAGTGTATGTCCCTTTGGACGTTTGTATCTAAGGACTTCGTTATTACTCGTTATGTTTTGTTCTTTTGCATTAGATTCCCTTTCAAGGTTTGTTCTTGTCTGGCTCCTACTAGGTTGTTGTTTTTGCACGCCCTCGTGTTGTCCTTGTTTAGTCATGTGCCCCTCGTGTCATATTCGCTTAATGATTATGTGATGAGAATGGACCAAACCACTTGATGCTCATTGTACGATATTGGAACATGTATATTGCTGCAAGCCATCATTTTACCAGTTTCTATATGGTCATCTAGCACATTTCATTTCTATATGATTCTTTAGCTTTAGATAAGATTATGGGGACTTCATGTTTACTGGTTGAGATGTCTAGGTTTTTGTAACAAATGGTGACAGAAAACGTACTAATGAACTTCCCATTAGGCTTTCCTTTACATTGTCTATGTACTTCACGTTTTCATCTTATCCTTTTTAAAACCATCTCTATGCCTAATTGTAACGGTTATTGTAAGATCCCACATTGGTTGAGGAGGAGAACAAAACACCCTTTATAAGGGTGTGGAAACCTCTCTCTAGCAGACGTGTTTTAAAAACCTTGAGGGAAAGTTCGAAAGGTTGAGCCCAAGGAGAACAATATTGGCTAGCAGTCGGCTTGGGGCCTCTACACTAATCCGCCAAAGGAATAGGTGTTGGGCTTTACGTTGCATGATTTGATACCTTGTGACATTTTTGTTTCTTTTTAATCAGTTCACATAGAGAAAGAAAGCGAGGGACATGATGGGATAATGCCTCAAAGGGGTGCTAGCTCTGAAACAGACCTTACTACCGTGTTAAATGCTTGGTATTCTGCAGGCTTCTACACTGGCAAGTGAGTTCTGCTTAGTTTCATTCTCGCTCAAGACATGCGTTATATATTTCTTCTTGTCCACAGCTGTTTCATATTTTATAGTATCTTCCTTCTTTGAAAGAAACACAAAAAGGCCTTCATTTCAAAATTTAATCTGCAGTTTCCTTGACTGAAGTGTTTGTTTGTTTGTTTGTTATATGCTGAAATGAAATGCAAGCATTCAGTTCTCTCAAAACTGATCTGTTTTGCAGATACCTTGTGGAGCAATCTCAGGCCAAGAAATGATGAACACCAGGCTCATCTTACCAATTTCCCCCACTTTTGATACCCACCCATGGCATTTGTGTGCTATGAGTTTGAATTTTGATCTAAATGAGTTTGAATTTGGCGTTTTTTAGAATTTTGATCAAACTAGTTAAGACATATATTCTCGACCAAGAGGTAAGATGTTCAATCTTTTCATTCCACGTGTTGTCGACCCATAAATAGAACTCTGATCAAACTATAGTTCAACTGGTTAAGACATATATTCTCGACCAAGAGGTAAGATGTTCAATCTTTTCATTCCACGTGTTGCTGACCCATAAATAGAACTCTGATCAAACTATAGTTCAACTGGTTAAGACATATATTTTCGACCAAGAGGTAAGATGTTCAAATCTTTTCATTCCATGTGTTATTGAATGA

mRNA sequence

ACAATCCACTCCCTTTGGGGCCCAATGTCCTCGCTGACACTCTTCCTCTCTCCAATTGATGTGGGATCTCACACAATTGCTTTCAGGATGTAGAAGAATGGGAATGGTTGAAAGGTTGTTAGAACGGTTTCTTTGGCTGCTGTTACAAACACAACTTAGGTGAACATTTTGAGGAAAAAGCAGTGATCTAGTAGAGATTCATGGTATTGTAACTTTCCATTTCAGTGTCATTCTTGTCCAATTGTGGAAGGGTCCTATAATTTGAGGAGGGCACATGCCCCCGCTGGCCCCAATATGATCTGCCCTTGCATGAATTCTTCTTTTGTCTTCTATTATCGTTTATGGGACGTTTTTTGGGACGCCCTGAGTGTCTTCTTTGAAGCTATCCCGCTTAATATTTTATTACTATCTCTTAAACTATTGCATCTTGAGAGAACAGGAGTGTAGATGAAGAGAGCTATATTGGAGCAAATGATGTTATGTTTGAAGTCAATGAGACTACAAATACCTCAGAAGCTAAGGAAAATATCAGTGTAGAGCCATGTCCTATATCTTGTACAGATTTTTCAGCCGCCCTATATGTGAAAGAGACGGAACAGGAGACCGTTGAGGACTCCAATTTAAATCTAAAAGGTGAAGATGGCTATAACGAGCTACTCAAGCAGTATTACGAGCTTGAGGAGAAGAGGCAGAAGGTTCTAGAACAGCTTTATCAATGTGGTGCTGGTGGTTGGAACTACCAGGATGTCGGTGCAGGGTCTGACATTGGAAATCAATGGGGAACATCTGCTGCTTATCAAGAACACCCAGTCTCTGCAAGCCAACCTTCTCTTAACCAGACAATACCGTCTTACTCGCCCTCCAGTTATCCAATTTCAGCTGGTCCTCAAAGTTCGTCCCATGCTGATGGTGACATAATCAAAACTGCAATGGATTCTGCAGCAAGAGCTATATCGTCCATAAAGACTGTAAATAAAGTTCACATAGAGAAAGAAAGCGAGGGACATGATGGGATAATGCCTCAAAGGGGTGCTAGCTCTGAAACAGACCTTACTACCGTGTTAAATGCTTGGTATTCTGCAGGCTTCTACACTGGCAAATACCTTGTGGAGCAATCTCAGGCCAAGAAATGATGAACACCAGGCTCATCTTACCAATTTCCCCCACTTTTGATACCCACCCATGGCATTTGTGTGCTATGAGTTTGAATTTTGATCTAAATGAGTTTGAATTTGGCGTTTTTTAGAATTTTGATCAAACTAGTTAAGACATATATTCTCGACCAAGAGGTAAGATGTTCAATCTTTTCATTCCACGTGTTGTCGACCCATAAATAGAACTCTGATCAAACTATAGTTCAACTGGTTAAGACATATATTCTCGACCAAGAGGTAAGATGTTCAATCTTTTCATTCCACGTGTTGCTGACCCATAAATAGAACTCTGATCAAACTATAGTTCAACTGGTTAAGACATATATTTTCGACCAAGAGGTAAGATGTTCAAATCTTTTCATTCCATGTGTTATTGAATGA

Coding sequence (CDS)

ATGTTTGAAGTCAATGAGACTACAAATACCTCAGAAGCTAAGGAAAATATCAGTGTAGAGCCATGTCCTATATCTTGTACAGATTTTTCAGCCGCCCTATATGTGAAAGAGACGGAACAGGAGACCGTTGAGGACTCCAATTTAAATCTAAAAGGTGAAGATGGCTATAACGAGCTACTCAAGCAGTATTACGAGCTTGAGGAGAAGAGGCAGAAGGTTCTAGAACAGCTTTATCAATGTGGTGCTGGTGGTTGGAACTACCAGGATGTCGGTGCAGGGTCTGACATTGGAAATCAATGGGGAACATCTGCTGCTTATCAAGAACACCCAGTCTCTGCAAGCCAACCTTCTCTTAACCAGACAATACCGTCTTACTCGCCCTCCAGTTATCCAATTTCAGCTGGTCCTCAAAGTTCGTCCCATGCTGATGGTGACATAATCAAAACTGCAATGGATTCTGCAGCAAGAGCTATATCGTCCATAAAGACTGTAAATAAAGTTCACATAGAGAAAGAAAGCGAGGGACATGATGGGATAATGCCTCAAAGGGGTGCTAGCTCTGAAACAGACCTTACTACCGTGTTAAATGCTTGGTATTCTGCAGGCTTCTACACTGGCAAATACCTTGTGGAGCAATCTCAGGCCAAGAAATGA

Protein sequence

MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYSAGFYTGKYLVEQSQAKK

Homology

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BLAST of Carg23588 vs. NCBI nr
Match: XP_022923599.1 (uncharacterized protein LOC111431235 [Cucurbita moschata])

HSP 1 Score: 428.3 bits (1100), Expect = 1.5e-116
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELL 60
           MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELL
Sbjct: 68  MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELL 127

Query: 61  KQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQ 120
           KQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQ
Sbjct: 128 KQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQ 187

Query: 121 TIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIM 180
           TIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIM
Sbjct: 188 TIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIM 247

Query: 181 PQRGASSETDLTTVLNAWYSAGFYTGKYLVEQSQAKK 218
           PQRGASSETDLTTVLNAWYSAGFYTGKYLVEQSQAKK
Sbjct: 248 PQRGASSETDLTTVLNAWYSAGFYTGKYLVEQSQAKK 284

[Close]

BLAST of Carg23588 vs. NCBI nr
Match: XP_022965362.1 (uncharacterized protein LOC111465241 isoform X2 [Cucurbita maxima])

HSP 1 Score: 415.2 bits (1066), Expect = 1.3e-112
Identity = 210/217 (96.77%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELL 60
           MFEVNET NTSEAKENISVEPCPISCTDFSAALYVKETEQET+EDSNLNL+GEDGYNELL
Sbjct: 68  MFEVNETKNTSEAKENISVEPCPISCTDFSAALYVKETEQETIEDSNLNLRGEDGYNELL 127

Query: 61  KQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQ 120
           KQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQ
Sbjct: 128 KQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQ 187

Query: 121 TIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIM 180
            IPSY PSSYPISAGPQSSS ADGDIIKTAMDSAARAISS+KTVNKVHIEKESEGHDGIM
Sbjct: 188 AIPSYPPSSYPISAGPQSSSLADGDIIKTAMDSAARAISSMKTVNKVHIEKESEGHDGIM 247

Query: 181 PQRGASSETDLTTVLNAWYSAGFYTGKYLVEQSQAKK 218
           PQRGASSETDLTTVLNAWYSAGFYTGKYLVEQSQAKK
Sbjct: 248 PQRGASSETDLTTVLNAWYSAGFYTGKYLVEQSQAKK 284

[Close]

BLAST of Carg23588 vs. NCBI nr
Match: XP_023551935.1 (uncharacterized protein LOC111809760 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 411.8 bits (1057), Expect = 1.5e-111
Identity = 209/217 (96.31%), Postives = 211/217 (97.24%), Query Frame = 0


Query: 1   MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELL 60
           MFEVNE TNTSEAKENISVEPCPISCTDFSAALYVKETEQETV+DSNLNLKGEDGYNELL
Sbjct: 68  MFEVNEPTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVKDSNLNLKGEDGYNELL 127

Query: 61  KQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQ 120
           KQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQ
Sbjct: 128 KQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQ 187

Query: 121 TIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIM 180
            IPSY PSSYP+SAGPQSSS ADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGH GIM
Sbjct: 188 AIPSYPPSSYPVSAGPQSSSRADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHAGIM 247

Query: 181 PQRGASSETDLTTVLNAWYSAGFYTGKYLVEQSQAKK 218
           PQ GASSETDLTTVLNAWYSAGFYTGKYLVEQSQAKK
Sbjct: 248 PQSGASSETDLTTVLNAWYSAGFYTGKYLVEQSQAKK 284

[Close]

BLAST of Carg23588 vs. NCBI nr
Match: XP_022965361.1 (uncharacterized protein LOC111465241 isoform X1 [Cucurbita maxima])

HSP 1 Score: 397.5 bits (1020), Expect = 2.9e-107
Identity = 200/211 (94.79%), Postives = 206/211 (97.63%), Query Frame = 0


Query: 1   MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELL 60
           MFEVNET NTSEAKENISVEPCPISCTDFSAALYVKETEQET+EDSNLNL+GEDGYNELL
Sbjct: 68  MFEVNETKNTSEAKENISVEPCPISCTDFSAALYVKETEQETIEDSNLNLRGEDGYNELL 127

Query: 61  KQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQ 120
           KQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQ
Sbjct: 128 KQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQ 187

Query: 121 TIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIM 180
            IPSY PSSYPISAGPQSSS ADGDIIKTAMDSAARAISS+KTVNKVHIEKESEGHDGIM
Sbjct: 188 AIPSYPPSSYPISAGPQSSSLADGDIIKTAMDSAARAISSMKTVNKVHIEKESEGHDGIM 247

Query: 181 PQRGASSETDLTTVLNAWYSAGFYTGKYLVE 212
           PQRGASSETDLTTVLNAWYSAGFYTGK +++
Sbjct: 248 PQRGASSETDLTTVLNAWYSAGFYTGKSVLQ 278

[Close]

BLAST of Carg23588 vs. NCBI nr
Match: XP_023551933.1 (uncharacterized protein LOC111809760 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 394.0 bits (1011), Expect = 3.2e-106
Identity = 199/211 (94.31%), Postives = 204/211 (96.68%), Query Frame = 0


Query: 1   MFEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELL 60
           MFEVNE TNTSEAKENISVEPCPISCTDFSAALYVKETEQETV+DSNLNLKGEDGYNELL
Sbjct: 68  MFEVNEPTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVKDSNLNLKGEDGYNELL 127

Query: 61  KQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQ 120
           KQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQ
Sbjct: 128 KQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQ 187

Query: 121 TIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHDGIM 180
            IPSY PSSYP+SAGPQSSS ADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGH GIM
Sbjct: 188 AIPSYPPSSYPVSAGPQSSSRADGDIIKTAMDSAARAISSIKTVNKVHIEKESEGHAGIM 247

Query: 181 PQRGASSETDLTTVLNAWYSAGFYTGKYLVE 212
           PQ GASSETDLTTVLNAWYSAGFYTGK +++
Sbjct: 248 PQSGASSETDLTTVLNAWYSAGFYTGKSVLQ 278

[Close]

BLAST of Carg23588 vs. TrEMBL
Match: tr|A0A1S3BL18|A0A1S3BL18_CUCME (uncharacterized protein LOC103490751 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103490751 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 2.1e-77
Identity = 165/217 (76.04%), Postives = 178/217 (82.03%), Query Frame = 0


Query: 2   FEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLK 61
           FEV ETT+T EAKENI VE   I+CTDFS AL+V+ET++E VEDS+L     + YN LLK
Sbjct: 69  FEVEETTSTLEAKENIGVE-LSIACTDFSDALHVEETQEEPVEDSDL-----EEYNHLLK 128

Query: 62  QYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQT 121
           QYYELEEKRQKVLEQLYQCGAGGWNYQDV AGSD+G QWGTSAA QEHPVSASQPS    
Sbjct: 129 QYYELEEKRQKVLEQLYQCGAGGWNYQDVNAGSDVGTQWGTSAANQEHPVSASQPSHYPE 188

Query: 122 IPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAI-SSIKTVNKVHIEKESEGHDGIM 181
           IPSY P+ YPI AGPQSSS  D DIIKTAMDSA RAI SS+KTVNKV   KES+ HD IM
Sbjct: 189 IPSYLPTGYPILAGPQSSSLVDDDIIKTAMDSATRAISSSLKTVNKV---KESDRHDEIM 248

Query: 182 PQRGASSETDLTTVLNAWYSAGFYTGKYLVEQSQAKK 218
           PQ G SSETDL TVLNAWYSAGFYTGKYL+EQS AKK
Sbjct: 249 PQSGDSSETDLATVLNAWYSAGFYTGKYLMEQSHAKK 276

[Close]

BLAST of Carg23588 vs. TrEMBL
Match: tr|A0A1S4DXI5|A0A1S4DXI5_CUCME (uncharacterized protein LOC103490751 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490751 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 5.2e-73
Identity = 164/253 (64.82%), Postives = 179/253 (70.75%), Query Frame = 0


Query: 2   FEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLK 61
           FEV ETT+T EAKENI VE   I+CTDFS AL+V+ET++E VEDS+L     + YN LLK
Sbjct: 69  FEVEETTSTLEAKENIGVE-LSIACTDFSDALHVEETQEEPVEDSDL-----EEYNHLLK 128

Query: 62  QYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQT 121
           QYYELEEKRQKVLEQLYQCGAGGWNYQDV AGSD+G QWGTSAA QEHPVSASQPS    
Sbjct: 129 QYYELEEKRQKVLEQLYQCGAGGWNYQDVNAGSDVGTQWGTSAANQEHPVSASQPSHYPE 188

Query: 122 IPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAI-SSIKTVNKVHI----------- 181
           IPSY P+ YPI AGPQSSS  D DIIKTAMDSA RAI SS+KTVNK ++           
Sbjct: 189 IPSYLPTGYPILAGPQSSSLVDDDIIKTAMDSATRAISSSLKTVNKGNVVVNFPSGYELY 248

Query: 182 -------------------------EKESEGHDGIMPQRGASSETDLTTVLNAWYSAGFY 218
                                     KES+ HD IMPQ G SSETDL TVLNAWYSAGFY
Sbjct: 249 VFILSFLTLCLIHKALLLMSVITLKVKESDRHDEIMPQSGDSSETDLATVLNAWYSAGFY 308

[Close]

BLAST of Carg23588 vs. TrEMBL
Match: tr|A0A0A0L6D7|A0A0A0L6D7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G008290 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 5.2e-73
Identity = 157/218 (72.02%), Postives = 179/218 (82.11%), Query Frame = 0


Query: 2   FEVNETTNTSEAKENISVEPCPISCTDFSAALY--VKETEQETVEDSNLNLKGEDGYNEL 61
           F V ETT+T EAKENI VEP  ++CTDFS AL+  V+ET++E VEDSNLNLKGE+ YN L
Sbjct: 69  FGVEETTSTLEAKENIGVEP-SMACTDFSDALHVEVEETQEEPVEDSNLNLKGEE-YNRL 128

Query: 62  LKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLN 121
           LKQYYELEEKRQK+LEQLYQCGAGGWNYQ+V AGS++G QWG  AA QEHPVSASQPS  
Sbjct: 129 LKQYYELEEKRQKILEQLYQCGAGGWNYQNVNAGSNVGTQWGAYAANQEHPVSASQPSYY 188

Query: 122 QTIPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAI-SSIKTVNKVHIEKESEGHDG 181
             +PSY P+SYPI  GPQS+S  DGDIIKTAMDSA RAI SS++TVNK    KES+  DG
Sbjct: 189 PAMPSYLPTSYPIVVGPQSTSLDDGDIIKTAMDSATRAISSSMETVNK---GKESDRDDG 248

Query: 182 IMPQRGASSETDLTTVLNAWYSAGFYTGKYLVEQSQAK 217
           IM + G SS+TDL TVLNAWYSAGF+TGKYL+EQS AK
Sbjct: 249 IMRRSGDSSQTDLATVLNAWYSAGFHTGKYLMEQSHAK 281

[Close]

BLAST of Carg23588 vs. TrEMBL
Match: tr|A0A1S4DXH8|A0A1S4DXH8_CUCME (uncharacterized protein LOC103490751 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490751 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.5e-72
Identity = 165/256 (64.45%), Postives = 178/256 (69.53%), Query Frame = 0


Query: 2   FEVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDSNLNLKGEDGYNELLK 61
           FEV ETT+T EAKENI VE   I+CTDFS AL+V+ET++E VEDS+L     + YN LLK
Sbjct: 69  FEVEETTSTLEAKENIGVE-LSIACTDFSDALHVEETQEEPVEDSDL-----EEYNHLLK 128

Query: 62  QYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLNQT 121
           QYYELEEKRQKVLEQLYQCGAGGWNYQDV AGSD+G QWGTSAA QEHPVSASQPS    
Sbjct: 129 QYYELEEKRQKVLEQLYQCGAGGWNYQDVNAGSDVGTQWGTSAANQEHPVSASQPSHYPE 188

Query: 122 IPSYSPSSYPISAGPQSSSHADGDIIKTAMDSAARAI-SSIKTVNKVHI----------- 181
           IPSY P+ YPI AGPQSSS  D DIIKTAMDSA RAI SS+KTVNKV             
Sbjct: 189 IPSYLPTGYPILAGPQSSSLVDDDIIKTAMDSATRAISSSLKTVNKVVTGNVVVNFPSGY 248

Query: 182 ----------------------------EKESEGHDGIMPQRGASSETDLTTVLNAWYSA 218
                                        KES+ HD IMPQ G SSETDL TVLNAWYSA
Sbjct: 249 ELYVFILSFLTLCLIHKALLLMSVITLKVKESDRHDEIMPQSGDSSETDLATVLNAWYSA 308

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BLAST of Carg23588 vs. TrEMBL
Match: tr|V4V2B3|V4V2B3_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10001787mg PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.5e-27
Identity = 98/245 (40.00%), Postives = 132/245 (53.88%), Query Frame = 0


Query: 3   EVNETTNTSEAKENISVEPCPISCTDFSAALYVKETEQETVEDS---NLNLKGEDGYNEL 62
           E+ ET N    KE+  VE        ++  L+V+ +      D+   + + +G D YN+L
Sbjct: 74  EMGETENIMSVKEDPCVE-------SYAPELHVESSNGLATNDAVKGHSHSQGSDDYNQL 133

Query: 63  LKQYYELEEKRQKVLEQLYQCGAGGWNYQDVGAGSDIGNQWGTSAAYQEHPVSASQPSLN 122
           L QYYELEEK+Q++L+QL+Q  A  WNYQ  G G+    QWGT    QEHPV ASQ S  
Sbjct: 134 LSQYYELEEKKQQILQQLHQFSA--WNYQFSGEGA----QWGTYTTSQEHPVPASQES-Q 193

Query: 123 QTIPSYSP----------SSYP------------------ISAGPQSSSHADGDIIKTAM 182
             + S  P          ++YP                   +A  +S+S  + DI+ TAM
Sbjct: 194 TVVCSCCPYGCQFLVAPCTAYPSCSLGGACTSKTCTDKNAAAASRKSTSLVNDDIVNTAM 253

Query: 183 DSAARAISSIKTVNKVHIEKESEGHDGIMPQRGASSETDLTTVLNAWYSAGFYTGKYLVE 217
            +A +AISS+K+ + V+ +   E  +        SSETDLT VLNAWYSAGFYTGKYL E
Sbjct: 254 GAAGKAISSMKSKSFVYPDINEEIEEK-KENESISSETDLTVVLNAWYSAGFYTGKYLTE 303

The following BLAST results are available for this feature:

BLAST of Carg23588 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923599.1	1.5e-116	100.00	uncharacterized protein LOC111431235 [Cucurbita moschata]	[more]
XP_022965362.1	1.3e-112	96.77	uncharacterized protein LOC111465241 isoform X2 [Cucurbita maxima]	[more]
XP_023551935.1	1.5e-111	96.31	uncharacterized protein LOC111809760 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022965361.1	2.9e-107	94.79	uncharacterized protein LOC111465241 isoform X1 [Cucurbita maxima]	[more]
XP_023551933.1	3.2e-106	94.31	uncharacterized protein LOC111809760 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg23588 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Carg23588 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg23588 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BL18\|A0A1S3BL18_CUCME	2.1e-77	76.04	uncharacterized protein LOC103490751 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S4DXI5\|A0A1S4DXI5_CUCME	5.2e-73	64.82	uncharacterized protein LOC103490751 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0L6D7\|A0A0A0L6D7_CUCSA	5.2e-73	72.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G008290 PE=4 SV=1	[more]
tr\|A0A1S4DXH8\|A0A1S4DXH8_CUCME	1.5e-72	64.45	uncharacterized protein LOC103490751 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|V4V2B3\|V4V2B3_9ROSI	1.5e-27	40.00	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10001787mg PE=4 ...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23588-RA	Carg23588-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 56..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..142
None	No IPR available	PANTHER	PTHR39267	FAMILY NOT NAMED	coord: 3..131 coord: 137..216

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23588	Cla008836	Watermelon (97103) v1	carwmB1049
Carg23588	Csa3G008290	Cucumber (Chinese Long) v2	carcuB1064
Carg23588	MELO3C013823	Melon (DHL92) v3.5.1	carmeB1017
Carg23588	ClCG10G001280	Watermelon (Charleston Gray)	carwcgB1021
Carg23588	CSPI03G01330	Wild cucumber (PI 183967)	carcpiB1085
Carg23588	Cucsa.322080	Cucumber (Gy14) v1	carcgyB1164
Carg23588	CmaCh06G006270	Cucurbita maxima (Rimu)	carcmaB1454
Carg23588	CmaCh16G011890	Cucurbita maxima (Rimu)	carcmaB1453
Carg23588	CmoCh06G006360	Cucurbita moschata (Rifu)	carcmoB1409
Carg23588	CmoCh16G012370	Cucurbita moschata (Rifu)	carcmoB1407
Carg23588	Lsi07G011620	Bottle gourd (USVL1VR-Ls)	carlsiB958
Carg23588	Cp4.1LG14g09790	Cucurbita pepo (Zucchini)	carcpeB1461
Carg23588	Cp4.1LG08g08810	Cucurbita pepo (Zucchini)	carcpeB1463
Carg23588	CsGy3G001220	Cucumber (Gy14) v2	carcgybB1033
Carg23588	MELO3C013823.2	Melon (DHL92) v3.6.1	carmedB1029
Carg23588	CsaV3_3G001350	Cucumber (Chinese Long) v3	carcucB1097
Carg23588	Cla97C10G185920	Watermelon (97103) v2	carwmbB1107
Carg23588	Bhi07G000822	Wax gourd	carwgoB1232

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg23588	Carg23401	Silver-seed gourd	carcarB651

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23588	Silver-seed gourd	carcarB613
Carg23588	Cucurbita moschata (Rifu)	carcmoB1408
Carg23588	Cucurbita pepo (Zucchini)	carcpeB1462
Carg23588	Bottle gourd (USVL1VR-Ls)	carlsiB957
Carg23588	Wax gourd	carwgoB1231