Cp4.1LG08g08810 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g08810
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionSurvival motor neuron
LocationCp4.1LG08 : 6937974 .. 6942232 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAAGCTGAGGCGGGAACACAATTCGTTCGGGTTTTATTTCTGTATTTGTTTTGCAATCGCATCACTCTCAGAATTCAATCGAGAAGATGGGTCGAAACAGAATGTACTGGGATGATTCCATGCCTGTCAAGGTCATGGATGAATCTATGACGAAGTATAAGGTTATCTCTCTCTCTTTCCATCTGTTAATTCTCTCTTTGCAGTATCCAAGAAGTGCTGTTGTAATCTGTCAATCTGAGATTGTGTTGATTTTGTCTTCGTTTGTTGCTTCGTGGCTTTGATACGAACAAATGCTGGCGTTTTTCAGATAATGCATGGACAAGAAGCCGTCTGTGTTCCGGCCGAGGGAGGAGTCTTTAACGGTTGCGGTAAGAACGATGAGCCGAAGAGGTCCGTAGTCTTTTCTTGTTTTTTTTTTGGTATCATCAATCATATCTCTGGAGGTTGAAATGTTATTGTAGTTATTTAAAATTCTTGGAAGTTTTGTGATCATGTTAACGGGCAATGTTCTTGTTTCTGTTTGATCCTGTGAGTTGAAATGAAAGTGAAGGCGTGGATATTAATATTTTTGGACCTTGGTTACATGTTTGTGAAATCTTTAAGTTTATGGCGTGGCTGCTAATTTTTGAGTCTTTAATGGTGGTCAGTGGACCAGTCTTGTTTACCTTCAAGAACTGGAAGTGACCTTGGAGAATGTTTTATTCAAGATGAAAGACCTTGCTACTTGTGAGATCCCACATTGGATGGGGAGGAGAATGAAACATTTTTTATAATAGTGTGTAAATCTCTCCCTAGTTAGTAGACACATTTTAAAAACCTTGAGAGAAAGCCCAAAAGGGAAAGTCCAAAAGGACAATATCTGTTAGTAGTGGGATTGAGTTGTTACGAATGGTATTAGAGTTAGACATTGGACGATATGCCAGCAAGGAGGTTGAGTCTCGAAGGAGGGTGGACACGAAGTAGTGTGCCAACGAGGACGTTGAACCCCGAAAGGGGTAGATTGTGAGATCCCACATCAGATGGGAAGGAGAACGAAACATTATTTATAAGAGTATGGAAACTTCTCCCTAGTAGATGCGTTTTAAAAACCTTGAGGGCAAACCCGAAAGAGAAAGCCCAAATAGGACAATATTTGCTAGTGGTGGGCTTGAACTCTTACATTACTAAAGTCAAGCTGGCCGATGAAAATGGTCATAACATACTATTTTGGGAGGAGACATGGAATGGAAATGAAGCTAATTTTCTATGTTCAGATCTACATTTTGGCAGGTTGCAAACGCCATCGTACTAGTCGGATTTAGAAAGCTGATTCTGCCTCTTAGAACTATCTTTTATACAAAACTTGAATGGGTATTATGGTATAAATAGATCTGGCATGAGAATTCTTGAGTTTTAGCAGCAAACCTCTCCTAAAAGACTATCATCTTTGCAAGTATGTTTAAAAGGCGAAAAATCTTCATTTGGGAAGTCTAGTTGGGAATCTTTTTTCCCCATCGGGAATCCTTGATCTTGCCTCTTTCTGTTGAGGATTTTTGCAGTGATGAAGGTGGGGACGACTTCCTAATCCCACCTATATTCTTGATACCCGACTTTCTAACTTCTACCCCAAGCTACTTATGGAGAATGCATAACTTTAAAGTTACAAGTCTTGTGGGCTACCAAGCTACTCTACCCCAGTGGACAGATTTCCCATCACCAAGAAAAACCGCACGCCATAAAGTTGAATGACACTTGAATGACACTTGAATGACAGTCTTTTGATTTGATGCCTTGTCATATATGCTATATGGAGTTATTTTGACTGGTCTCAACTAACACTAGATTTTGGATCCTAGGGAAGTTAGGGTCTTTGCAACCATATAAACATTGTAGAAGAAGAAATGTTCTTTAATGCACTACCTCTTGGCCTCCAAGATATGGGGAAGGCACTTAAAGGCGTGCTAGGTTTAGGTTGGATATTCTGGAGGTGCGAGAAAGATTCAGCGGTGCAATTGCTTTTAGAATGTAGAAAAAACAAGAACATTTGAAAAGTTATTAGAACGGTTTCTGTGGCTGCTGTTACCTACAAAGTTTACTTTAGAGAATACTTTGAGAGAAAAGAAGTGATTTCGTAGAGGTTCAGGGTAGAATGATCATTGTTACTTTCCATTTCAACGTCCTTCTGGTCTGCAATTATGGAAGAGTACTATAAAATTTGGGTTTTTTTTTTTGGTCAAAGACAAGCTAGAGGGCTCTATATCACTCTCCCTAGGTCTTACTGTGGGGTCTCATGTAACAGTCCAAGTCCACTGCTAGTAGATATTGTTCTCTTGGGGCTTTCTCTTTCGGGCATCCCCTCAAGGTTTTTAAAATGCATTTTTTTTATCTACTAGATGTGGATTTGTGTTGTTACAAATGGTATTAGAGCCAGACATCGAGTGATGTGCCAACGAGGAGACTGAGCCTTGAAGGGGGGTGGACACGAAGCAGTGTACCAGCAAGGAGGCTAAGTTTTGAAGGGGGTGAACACGAGGCGGTATGCCAGCAAGGGTGTTGGGCCCCACTTTAGGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACATTCTTTATAAAGGTGTGGAAACTTCCCATTTATTTATTTGCTTACGGTGAACTTGGGCCGTTACATTTGGTCTTTAGACCTTGTTCTCTTATTTTTTTTGTGTTATTGTATCTCATTCTTATCAAAGAAGAGAAGGGAGATAGATAGGAAGAAGTGCCATGGCTAAGCCCCTTCTTGTTTTGTAGGATATATTGCAACTTCTCTTCAATAATCTCCACTAGGGAAAATACAGGAAAAATAACATATAGTTATTCCGCTTAATATTTTATTACTCTCTTAATTTTTGTTCATCTTCAAAGAACAGGTGTGTAAATGAAGAGGGCAACGTCGAGTTTGAAGTTAATGGAATTAGAAATGCCTCGGAAGCTAATGAAAATAGCACTGTAGAGCCGCAACAGGGACCCATTGAGCACTTCAATTTAGATCTGAAAGGTGAAGAGCGCTATAACCAGCTACTCAATCAGTATTACGAGCTCGAGGAGAAGAGGCAGAAGGTTCTAGAACAGCTGTATCAATCCGGTGCTGGTGGTTGGAACTACCAGGATGTCAGCGCAGGGTCGGAGTTTGGAACATCTTCTGCTTATCAAGAGCTCCCAGCCTCTGCAAGCCAACCTTCTCAAAACCATCCAATACCCTCCTATTTTCCCTCCAGTTTTCCAATTCAAGCTGGTATGGATTGCTTGTTGTATGGATTGTTTGTTGTTGGCAAGTGGCAAAGTGTTACCCATTTTTCATTCATTGGTCTCAGGTCCTGAAAGTTTGTCCTTCGCTGATGATGACATTATCAAAACTGCAATGGATTCTGCAGAAAGAGCTATATCCTCCGTGAAGACTGTAAAAAAAGGTAGGCATGATTATTTCGAGTCGTATCTTTTTAGATTATCTGTTCGTTGTGTCGTATTGAGTTAACGATTATCCGACGAGCATGAACCAAACCACTTCAGTAGTTTCAACATGATCTTGCATATTTCAGTTGTGCATACATTTTAAATAGCTTTAGATAAGAATCATAAGATTATATGCGTTTGATCTGTTGACATAGAGAAAGAGAGCGAGAAACATGATGATGGGGTAATGGCGCAAAGTGGTCCAGTTGTATACTCTGAAACAGACCTTTCTGCTGTTTTTCATGCTTGGTATTCTGCAGGCTTCTACACTGGCAAGTACGTTTTGCTTGAAAACGTTCTTTTAGACACTTAAAAAGTCGTTCCAAATAGGCCCTTTAAAAAGATCGAGTCTAATCAAGTGTGTAATAATCTCGATCTGTTTTGCAGATACCTTGTGGAGCAATCTCATCCAAAGAAACTGTGAAAAAACAAGCTTCCTCCTACAACTCTATAATCTTTTCACTCAACTTTGCTTGTACAGAACAAACCCAACTCTGATCTATAAATGAGTTTCAATTTTCCACTATTTTCGTTTTCTGTTGATTTTGTGACATTTTAGCGCCCTTAGACGTCTTATAGTTATAGCGAACGTCTCATTCGATAACCTATTGAGCTTTTAACTTTTGGTTTTTACAATTGTGGTTGTTTTTTTACAATAGAGATGTCCATGGCGTGGGGATAGGAAGTCTTTTCCATCCTCATCCCGACCCCATTCTTCATTTTTTTATTATTGCAAAAATTTTCATTTATTTTTATAGGGATCGGGGCAAATACACAA

mRNA sequence

GCAAGCTGAGGCGGGAACACAATTCGTTCGGGTTTTATTTCTGTATTTGTTTTGCAATCGCATCACTCTCAGAATTCAATCGAGAAGATGGGTCGAAACAGAATGTACTGGGATGATTCCATGCCTGTCAAGGTCATGGATGAATCTATGACGAAGTATAAGATAATGCATGGACAAGAAGCCGTCTGTGTTCCGGCCGAGGGAGGAGTCTTTAACGGTTGCGGTAAGAACGATGAGCCGAAGAGGTGTGTAAATGAAGAGGGCAACGTCGAGTTTGAAGTTAATGGAATTAGAAATGCCTCGGAAGCTAATGAAAATAGCACTGTAGAGCCGCAACAGGGACCCATTGAGCACTTCAATTTAGATCTGAAAGGTGAAGAGCGCTATAACCAGCTACTCAATCAGTATTACGAGCTCGAGGAGAAGAGGCAGAAGGTTCTAGAACAGCTGTATCAATCCGGTGCTGGTGGTTGGAACTACCAGGATGTCAGCGCAGGGTCGGAGTTTGGAACATCTTCTGCTTATCAAGAGCTCCCAGCCTCTGCAAGCCAACCTTCTCAAAACCATCCAATACCCTCCTATTTTCCCTCCAGTTTTCCAATTCAAGCTGGTCCTGAAAGTTTGTCCTTCGCTGATGATGACATTATCAAAACTGCAATGGATTCTGCAGAAAGAGCTATATCCTCCGTGAAGACTGTAAAAAAAGAGAAAGAGAGCGAGAAACATGATGATGGGGTAATGGCGCAAAGTGGTCCAGTTGTATACTCTGAAACAGACCTTTCTGCTGTTTTTCATGCTTGGTATTCTGCAGGCTTCTACACTGGCAAATACCTTGTGGAGCAATCTCATCCAAAGAAACTGTGAAAAAACAAGCTTCCTCCTACAACTCTATAATCTTTTCACTCAACTTTGCTTGTACAGAACAAACCCAACTCTGATCTATAAATGAGTTTCAATTTTCCACTATTTTCGTTTTCTGTTGATTTTGTGACATTTTAGCGCCCTTAGACGTCTTATAGTTATAGCGAACGTCTCATTCGATAACCTATTGAGCTTTTAACTTTTGGTTTTTACAATTGTGGTTGTTTTTTTACAATAGAGATGTCCATGGCGTGGGGATAGGAAGTCTTTTCCATCCTCATCCCGACCCCATTCTTCATTTTTTTATTATTGCAAAAATTTTCATTTATTTTTATAGGGATCGGGGCAAATACACAA

Coding sequence (CDS)

ATGGGTCGAAACAGAATGTACTGGGATGATTCCATGCCTGTCAAGGTCATGGATGAATCTATGACGAAGTATAAGATAATGCATGGACAAGAAGCCGTCTGTGTTCCGGCCGAGGGAGGAGTCTTTAACGGTTGCGGTAAGAACGATGAGCCGAAGAGGTGTGTAAATGAAGAGGGCAACGTCGAGTTTGAAGTTAATGGAATTAGAAATGCCTCGGAAGCTAATGAAAATAGCACTGTAGAGCCGCAACAGGGACCCATTGAGCACTTCAATTTAGATCTGAAAGGTGAAGAGCGCTATAACCAGCTACTCAATCAGTATTACGAGCTCGAGGAGAAGAGGCAGAAGGTTCTAGAACAGCTGTATCAATCCGGTGCTGGTGGTTGGAACTACCAGGATGTCAGCGCAGGGTCGGAGTTTGGAACATCTTCTGCTTATCAAGAGCTCCCAGCCTCTGCAAGCCAACCTTCTCAAAACCATCCAATACCCTCCTATTTTCCCTCCAGTTTTCCAATTCAAGCTGGTCCTGAAAGTTTGTCCTTCGCTGATGATGACATTATCAAAACTGCAATGGATTCTGCAGAAAGAGCTATATCCTCCGTGAAGACTGTAAAAAAAGAGAAAGAGAGCGAGAAACATGATGATGGGGTAATGGCGCAAAGTGGTCCAGTTGTATACTCTGAAACAGACCTTTCTGCTGTTTTTCATGCTTGGTATTCTGCAGGCTTCTACACTGGCAAATACCTTGTGGAGCAATCTCATCCAAAGAAACTGTGA

Protein sequence

MGRNRMYWDDSMPVKVMDESMTKYKIMHGQEAVCVPAEGGVFNGCGKNDEPKRCVNEEGNVEFEVNGIRNASEANENSTVEPQQGPIEHFNLDLKGEERYNQLLNQYYELEEKRQKVLEQLYQSGAGGWNYQDVSAGSEFGTSSAYQELPASASQPSQNHPIPSYFPSSFPIQAGPESLSFADDDIIKTAMDSAERAISSVKTVKKEKESEKHDDGVMAQSGPVVYSETDLSAVFHAWYSAGFYTGKYLVEQSHPKKL
Homology
[Close]
BLAST of Cp4.1LG08g08810 vs. TrEMBL
Match: A0A0A0L6D7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G008290 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 8.3e-72
Identity = 168/285 (58.95%), Postives = 198/285 (69.47%), Query Frame = 1 

Query: 1   MGRNRMYWDDSMPVKVMDESMTKYKIMHGQEAVCVPAEGG-VFNGCGKNDEPKRCVNEEG 60
           MG ++MYWDDSM VK MDE+M KYKIMHG E   V +EGG V NGCGK+DE KR V+EE 
Sbjct: 1   MGLDKMYWDDSMIVKAMDEAMWKYKIMHGHEVPRVSSEGGGVVNGCGKSDELKRSVDEES 60

Query: 61  -----NVEFEVNGIRNASEANENSTVEP------------------QQGPIEHFNLDLKG 120
                NVEF V    +  EA EN  VEP                  Q+ P+E  NL+LKG
Sbjct: 61  YIGENNVEFGVEETTSTLEAKENIGVEPSMACTDFSDALHVEVEETQEEPVEDSNLNLKG 120

Query: 121 EERYNQLLNQYYELEEKRQKVLEQLYQSGAGGWNYQDVSAGSEFGTS----SAYQELPAS 180
           EE YN+LL QYYELEEKRQK+LEQLYQ GAGGWNYQ+V+AGS  GT     +A QE P S
Sbjct: 121 EE-YNRLLKQYYELEEKRQKILEQLYQCGAGGWNYQNVNAGSNVGTQWGAYAANQEHPVS 180

Query: 181 ASQPSQNHPIPSYFPSSFPIQAGPESLSFADDDIIKTAMDSAERAI-SSVKTVKKEKESE 240
           ASQPS    +PSY P+S+PI  GP+S S  D DIIKTAMDSA RAI SS++TV K KES+
Sbjct: 181 ASQPSYYPAMPSYLPTSYPIVVGPQSTSLDDGDIIKTAMDSATRAISSSMETVNKGKESD 240

Query: 241 KHDDGVMAQSGPVVYSETDLSAVFHAWYSAGFYTGKYLVEQSHPK 257
           + DDG+M +SG    S+TDL+ V +AWYSAGF+TGKYL+EQSH K
Sbjct: 241 R-DDGIMRRSGD--SSQTDLATVLNAWYSAGFHTGKYLMEQSHAK 281

[Close]
BLAST of Cp4.1LG08g08810 vs. TrEMBL
Match: V4V2B3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001787mg PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.1e-27
Identity = 108/314 (34.39%), Postives = 148/314 (47.13%), Query Frame = 1 

Query: 1   MGRNRMYWDDSMPVKVMDESMTKYKIMHGQEAVCVP----AEGGVFNGC--GKNDEPKRC 60
           MG+    WDDS  VK  D++M+KYK MHG+    V     + G         +N EP+R 
Sbjct: 1   MGKEGELWDDSALVKAFDDAMSKYKKMHGKNKTNVEEKVTSSGEAIGSAHENQNHEPRRE 60

Query: 61  VNEEG----NVEFEVNGIRNASEANENSTVEPQQGPIEHFNLD--------------LKG 120
             +        + E+    N     E+  VE    P  H                   +G
Sbjct: 61  AEDANALVLETKTEMGETENIMSVKEDPCVE-SYAPELHVESSNGLATNDAVKGHSHSQG 120

Query: 121 EERYNQLLNQYYELEEKRQKVLEQLYQSGAGGWNYQDVSAGSEFGTSSAYQELPASASQP 180
            + YNQLL+QYYELEEK+Q++L+QL+Q  A  WNYQ    G+++GT +  QE P  ASQ 
Sbjct: 121 SDDYNQLLSQYYELEEKKQQILQQLHQFSA--WNYQFSGEGAQWGTYTTSQEHPVPASQE 180

Query: 181 SQN--------------HPIPSYFPSSF-------------PIQAGPESLSFADDDIIKT 240
           SQ                P  +Y   S                 A  +S S  +DDI+ T
Sbjct: 181 SQTVVCSCCPYGCQFLVAPCTAYPSCSLGGACTSKTCTDKNAAAASRKSTSLVNDDIVNT 240

Query: 241 AMDSAERAISSVKT-------VKKEKESEKHDDGVMAQSGPVVYSETDLSAVFHAWYSAG 257
           AM +A +AISS+K+       + +E E +K ++ +         SETDL+ V +AWYSAG
Sbjct: 241 AMGAAGKAISSMKSKSFVYPDINEEIEEKKENESIS--------SETDLTVVLNAWYSAG 300

[Close]
BLAST of Cp4.1LG08g08810 vs. TrEMBL
Match: A0A067E8X5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019321mg PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.1e-27
Identity = 108/314 (34.39%), Postives = 148/314 (47.13%), Query Frame = 1 

Query: 1   MGRNRMYWDDSMPVKVMDESMTKYKIMHGQEAVCVP----AEGGVFNGC--GKNDEPKRC 60
           MG+    WDDS  VK  D++M+KYK MHG+    V     + G         +N EP+R 
Sbjct: 1   MGKEGELWDDSALVKAFDDAMSKYKKMHGKNKTNVEEKVTSSGEAIGSAHENQNHEPRRE 60

Query: 61  VNEEG----NVEFEVNGIRNASEANENSTVEPQQGPIEHFNLD--------------LKG 120
             +        + E+    N     E+  VE    P  H                   +G
Sbjct: 61  AEDANALVLETKTEMGETENIMSVKEDPCVE-SYAPELHVESSNGLATNDAVKGHSHSQG 120

Query: 121 EERYNQLLNQYYELEEKRQKVLEQLYQSGAGGWNYQDVSAGSEFGTSSAYQELPASASQP 180
            + YNQLL+QYYELEEK+Q++L+QL+Q  A  WNYQ    G+++GT +  QE P  ASQ 
Sbjct: 121 SDDYNQLLSQYYELEEKKQQILQQLHQFSA--WNYQFSGEGAQWGTYTTSQEHPVPASQE 180

Query: 181 SQN--------------HPIPSYFPSSF-------------PIQAGPESLSFADDDIIKT 240
           SQ                P  +Y   S                 A  +S S  +DDI+ T
Sbjct: 181 SQTVVCSCCPYGCQFLVAPCTAYPSCSLGGACTSKTCTDKNAAAASRKSTSLVNDDIVNT 240

Query: 241 AMDSAERAISSVKT-------VKKEKESEKHDDGVMAQSGPVVYSETDLSAVFHAWYSAG 257
           AM +A +AISS+K+       + +E E +K ++ +         SETDL+ V +AWYSAG
Sbjct: 241 AMGAAGKAISSMKSKSFVYPDINEEIEEKKENESIS--------SETDLTVVLNAWYSAG 300

[Close]
BLAST of Cp4.1LG08g08810 vs. TrEMBL
Match: A0A0B0NST2_GOSAR (Survival motor neuron OS=Gossypium arboreum GN=F383_18755 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.1e-26
Identity = 109/317 (34.38%), Postives = 150/317 (47.32%), Query Frame = 1 

Query: 1   MGRNRMYWDDSMPVKVMDESMTKYKIMHGQEAVCVPAEGGVFNGCGKNDEPKRC---VNE 60
           MG+    WDDS  +   D +M+KYK MHG++         V     +  +P+      + 
Sbjct: 1   MGKESELWDDSALIDAFDNAMSKYKKMHGKKNSEANVSVSVHQTGDEAIKPRDAGENSSS 60

Query: 61  EGNVEFEVNGIRNASEANENSTV------------------EPQQGPIEHFNLDLKGEER 120
             N   E+   ++     EN TV                  + Q G + +   D +  + 
Sbjct: 61  RANTGMEMEAAKDVEPVKENHTVKLQTPETYIDSSTSLPMQDKQDGNMAYS--DSQAAQD 120

Query: 121 YNQLLNQYYELEEKRQKVLEQLYQSGAGGWNYQDVSAGS----EFGTSSAYQELPASASQ 180
           YNQLLNQYYE+E+KRQ +L+QL Q G+  WNYQ    GS    ++GTS A QE P   SQ
Sbjct: 121 YNQLLNQYYEVEDKRQMILQQLQQFGS--WNYQYSGEGSSTAAQWGTSCASQEYPIPTSQ 180

Query: 181 PSQNHPIPSYFP----------SSFP-----------IQAGPESLS-------FADDDII 240
            + +  I S  P          +S+P           I   P           F D DI+
Sbjct: 181 AAHSTVICSCCPYACQSLATTCTSYPCCSLAGTSVGKISTEPNGAMAYGNLPPFIDSDIV 240

Query: 241 KTAMDSAERAISSVKT-------VKKEKESEKHDDGVMAQSGPVVYSETDLSAVFHAWYS 258
           KTAM +AE+AISS+ T       V +E + +K  +  M QS      ETDL+ + +AWYS
Sbjct: 241 KTAMGAAEKAISSMTTKASINPNVNEENKEKKDGEEEMNQS---TSCETDLTVLLNAWYS 300

[Close]
BLAST of Cp4.1LG08g08810 vs. TrEMBL
Match: A0A0D2TAT5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G224100 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.4e-26
Identity = 110/314 (35.03%), Postives = 150/314 (47.77%), Query Frame = 1 

Query: 1   MGRNRMYWDDSMPVKVMDESMTKYKIMHGQEAVCVPAEGGVFNGCGKNDEPKRC---VNE 60
           MG+    WDDS  +   D +M+KYK MHG++         V     +  +P+      + 
Sbjct: 1   MGKESELWDDSALIDAFDNAMSKYKKMHGKKNSEANVSVSVHQTGDEAIKPRDAGENSSS 60

Query: 61  EGNVEFEVNGIRNASEANENSTVEPQ--QGPIEHFNL-------------DLKGEERYNQ 120
             N   E+   ++     EN TV+ Q  +  I+  +L             D +  + YNQ
Sbjct: 61  RANTGMEMEAAKDVEPVKENHTVKLQTPETCIDSSSLPMQDKQDGNKAYSDSQAAQDYNQ 120

Query: 121 LLNQYYELEEKRQKVLEQLYQSGAGGWNYQDVSAGS----EFGTSSAYQELPASASQPSQ 180
           LL QYYE+E+KRQ +L+QL Q G+  WNYQ    GS    ++ TS A QE P   SQ S 
Sbjct: 121 LLTQYYEVEDKRQMILQQLQQFGS--WNYQYSGEGSSTAAQWSTSCASQEYPIPTSQASH 180

Query: 181 NHPIPSYFP----------SSFP-----------IQAGPESL-------SFADDDIIKTA 240
           +  I S  P          +S+P           I   P           F D DI+KTA
Sbjct: 181 STVICSCCPYACQSLATTCTSYPCCSLAGTSVGKISTEPNGAVAYGNLPPFIDSDIVKTA 240

Query: 241 MDSAERAISSVKT-------VKKEKESEKHDDGVMAQSGPVVYSETDLSAVFHAWYSAGF 258
           M +AERAISS+ T       V +E + +K  +  M QS      ETDL+ + +AWYSAGF
Sbjct: 241 MGAAERAISSMTTKASINPNVNEENKEKKDGEEEMNQS---TSCETDLTVLLNAWYSAGF 300

[Close]
BLAST of Cp4.1LG08g08810 vs. NCBI nr
Match: gi|659095546|ref|XP_008448638.1| (PREDICTED: uncharacterized protein LOC103490751 [Cucumis melo])

HSP 1 Score: 285.8 bits (730), Expect = 7.5e-74
Identity = 172/284 (60.56%), Postives = 197/284 (69.37%), Query Frame = 1 

Query: 1   MGRNRMYWDDSMPVKVMDESMTKYKIMHGQEAVCVPAEGG-VFNGCGKNDEPKRCVNEEG 60
           MG ++MYWD+SM VK MDE+M KYKIMHG E  CV AEGG V N CGK+DE KR V+EE 
Sbjct: 1   MGLDKMYWDNSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVNDCGKSDELKRSVDEES 60

Query: 61  -----NVEFEVNGIRNASEANENSTVE----------------PQQGPIEHFNLDLKGEE 120
                NVEFEV    +  EA EN  VE                 Q+ P+E  +L     E
Sbjct: 61  YNGENNVEFEVEETTSTLEAKENIGVELSIACTDFSDALHVEETQEEPVEDSDL-----E 120

Query: 121 RYNQLLNQYYELEEKRQKVLEQLYQSGAGGWNYQDVSAGSE----FGTSSAYQELPASAS 180
            YN LL QYYELEEKRQKVLEQLYQ GAGGWNYQDV+AGS+    +GTS+A QE P SAS
Sbjct: 121 EYNHLLKQYYELEEKRQKVLEQLYQCGAGGWNYQDVNAGSDVGTQWGTSAANQEHPVSAS 180

Query: 181 QPSQNHPIPSYFPSSFPIQAGPESLSFADDDIIKTAMDSAERAI-SSVKTVKKEKESEKH 240
           QPS    IPSY P+ +PI AGP+S S  DDDIIKTAMDSA RAI SS+KTV K KES++H
Sbjct: 181 QPSHYPEIPSYLPTGYPILAGPQSSSLVDDDIIKTAMDSATRAISSSLKTVNKVKESDRH 240

Query: 241 DDGVMAQSGPVVYSETDLSAVFHAWYSAGFYTGKYLVEQSHPKK 258
           D+ +M QSG    SETDL+ V +AWYSAGFYTGKYL+EQSH KK
Sbjct: 241 DE-IMPQSGD--SSETDLATVLNAWYSAGFYTGKYLMEQSHAKK 276

[Close]
BLAST of Cp4.1LG08g08810 vs. NCBI nr
Match: gi|449465900|ref|XP_004150665.1| (PREDICTED: uncharacterized protein LOC101203762 [Cucumis sativus])

HSP 1 Score: 278.5 bits (711), Expect = 1.2e-71
Identity = 168/285 (58.95%), Postives = 198/285 (69.47%), Query Frame = 1 

Query: 1   MGRNRMYWDDSMPVKVMDESMTKYKIMHGQEAVCVPAEGG-VFNGCGKNDEPKRCVNEEG 60
           MG ++MYWDDSM VK MDE+M KYKIMHG E   V +EGG V NGCGK+DE KR V+EE 
Sbjct: 1   MGLDKMYWDDSMIVKAMDEAMWKYKIMHGHEVPRVSSEGGGVVNGCGKSDELKRSVDEES 60

Query: 61  -----NVEFEVNGIRNASEANENSTVEP------------------QQGPIEHFNLDLKG 120
                NVEF V    +  EA EN  VEP                  Q+ P+E  NL+LKG
Sbjct: 61  YIGENNVEFGVEETTSTLEAKENIGVEPSMACTDFSDALHVEVEETQEEPVEDSNLNLKG 120

Query: 121 EERYNQLLNQYYELEEKRQKVLEQLYQSGAGGWNYQDVSAGSEFGTS----SAYQELPAS 180
           EE YN+LL QYYELEEKRQK+LEQLYQ GAGGWNYQ+V+AGS  GT     +A QE P S
Sbjct: 121 EE-YNRLLKQYYELEEKRQKILEQLYQCGAGGWNYQNVNAGSNVGTQWGAYAANQEHPVS 180

Query: 181 ASQPSQNHPIPSYFPSSFPIQAGPESLSFADDDIIKTAMDSAERAI-SSVKTVKKEKESE 240
           ASQPS    +PSY P+S+PI  GP+S S  D DIIKTAMDSA RAI SS++TV K KES+
Sbjct: 181 ASQPSYYPAMPSYLPTSYPIVVGPQSTSLDDGDIIKTAMDSATRAISSSMETVNKGKESD 240

Query: 241 KHDDGVMAQSGPVVYSETDLSAVFHAWYSAGFYTGKYLVEQSHPK 257
           + DDG+M +SG    S+TDL+ V +AWYSAGF+TGKYL+EQSH K
Sbjct: 241 R-DDGIMRRSGD--SSQTDLATVLNAWYSAGFHTGKYLMEQSHAK 281

[Close]
BLAST of Cp4.1LG08g08810 vs. NCBI nr
Match: gi|1009159279|ref|XP_015897726.1| (PREDICTED: uncharacterized protein LOC107431355 [Ziziphus jujuba])

HSP 1 Score: 143.7 bits (361), Expect = 4.6e-31
Identity = 121/315 (38.41%), Postives = 158/315 (50.16%), Query Frame = 1 

Query: 1   MGRNRMYWDDSMPVKVMDESMTKYKIMHGQEAVCVPAEGG-----VFNGCGKNDEPKRCV 60
           MGR    WDDS  +   D++++ +K MH +++     + G     V  G G  ++  R  
Sbjct: 1   MGRQGDLWDDSALINAFDDAISSFKKMHSKKSNDGLTDKGEDHVHVLAGVGDTEQATRQA 60

Query: 61  --NEEGN----VEFEVNGIRNASEANENSTVEPQ------QGP--IEHFNLDLKGEERYN 120
             NEE N       EV    N S A EN  V P       QG   +++ N   +G E YN
Sbjct: 61  DTNEETNFASDTAAEVGQSSNLSVAKENHCVGPNVHESSTQGAEEVQNINSHSQGAEEYN 120

Query: 121 QLLNQYYELEEKRQKVLEQLYQSGAGGWNYQDVSAGSEFGTSSAYQELPASASQPSQNHP 180
           +LLNQYY+LEEKRQK+LEQL+Q G+  WNYQ    GS +GT   YQE   SA+Q    + 
Sbjct: 121 RLLNQYYQLEEKRQKILEQLHQFGS--WNYQYSGEGSGYGT---YQEHSLSANQSCNPNV 180

Query: 181 IPSYFP-----SSFPIQAGP-----------------------ESLSFADDDIIKTAMDS 240
           + S  P     +  P  + P                        S    D DI+KTAM +
Sbjct: 181 VCSCCPYGCQGAVAPCTSAPACCLGGPYACNSCPDASAVTDPGRSFPLEDGDIVKTAMGA 240

Query: 241 AERAISSVK----------TVKKEKESEK-HDDGVMAQSGPVVYSETDLSAVFHAWYSAG 258
           AERAISS+K             KE+E EK  ++ VM QS     SETDLS + +AWYSAG
Sbjct: 241 AERAISSMKMKSSGDFNADEASKEEEKEKGKNERVMVQS---TSSETDLSVLLNAWYSAG 300

[Close]
BLAST of Cp4.1LG08g08810 vs. NCBI nr
Match: gi|743809358|ref|XP_011018489.1| (PREDICTED: uncharacterized protein LOC105121518 [Populus euphratica])

HSP 1 Score: 132.9 bits (333), Expect = 8.1e-28
Identity = 117/329 (35.56%), Postives = 157/329 (47.72%), Query Frame = 1 

Query: 1   MGRNRMYWDDSMPVKVMDESMTKYKIMHGQEAVCVPA-EGGVFNGCGKNDEPKRCV---- 60
           MG+    WDDS  +   D++M+KYK MHG++ +   + +GG F G G  DE    V    
Sbjct: 1   MGKEGELWDDSALINAFDDAMSKYKKMHGKKRIQDKSTDGGKFGG-GTEDENASAVTRVD 60

Query: 61  --------------NEEGNVEFEVNGIRNASEANEN---------STVEPQQGPIEHFNL 120
                         N   N   E+    N + A  N         S V+P  G +    L
Sbjct: 61  ESLDGTVKEADENSNVTSNTVTELEETENLAPAKLNNCVDSLGPESYVDPSNGGVHAQTL 120

Query: 121 D---LKGEERYNQLLNQYYELEEKRQKVLEQLYQSGAGGWNYQDVSAGS----EFGTSSA 180
               L G E YNQLL QYYELEEKRQ++L+QL  +  GG+NYQ  + GS     +GT SA
Sbjct: 121 SGLYLHGAEDYNQLLGQYYELEEKRQRILQQL--NLHGGYNYQYPAEGSGSGGYWGTCSA 180

Query: 181 YQELPASASQPSQNHPIPSYFPSSFPIQAGP----------------------------E 240
            Q+   +A+Q S +  I S  P +      P                            +
Sbjct: 181 SQDQSVAATQASLSPLICSCCPYACHCSVAPCSSFSSCTLGGTSLGKACTDSSAVMNPGK 240

Query: 241 SLSFADDDIIKTAMDSAERAISSV--------KTVKKEK-ESEKHDDGVMAQSGPVVYSE 258
           S    DDDI+KTAMD+AERA+SS+          ++  K E  K ++G + Q+     SE
Sbjct: 241 SFPLIDDDIVKTAMDAAERAMSSMTMNTPAVNSDIEGNKAEKRKDNEGEITQN---TSSE 300

[Close]
BLAST of Cp4.1LG08g08810 vs. NCBI nr
Match: gi|645265489|ref|XP_008238175.1| (PREDICTED: uncharacterized protein LOC103336837 isoform X2 [Prunus mume])

HSP 1 Score: 131.7 bits (330), Expect = 1.8e-27
Identity = 116/312 (37.18%), Postives = 153/312 (49.04%), Query Frame = 1 

Query: 8   WDDSMPVKVMDESMTKYKIMHG---------QEAVCVPAEGGVFNGCGKNDEPKRC---- 67
           WDDS  +   D++M+ YK +HG         +E V +     V     ++++ KR     
Sbjct: 9   WDDSALINAFDDAMSSYKKIHGKKTNEASTKEEKVAINTAEQVITEVEESEDAKRQGDAD 68

Query: 68  --VNEEGNVEFEVNGIRNASEANENSTV-----EPQQGPIEHFNLDL---KGEERYNQLL 127
              N+      E     N SE  EN  V     EP     +    D    +G   YNQLL
Sbjct: 69  NHSNDTVKTTAEAGETSNISEVKENHHVDLHVPEPYSQVAQDVQNDYSYSQGAADYNQLL 128

Query: 128 NQYYELEEKRQKVLEQLYQSGAGGWNYQ---DVSAGSEFG-TSSAYQELPASASQPSQNH 187
           NQYYE+EEKRQK+LEQL+Q   GGWNYQ   +VS     G T+ + Q+      QPS   
Sbjct: 129 NQYYEVEEKRQKLLEQLHQ--FGGWNYQYSGEVSGSIVQGDTAYSSQQHAVPTCQPSNPA 188

Query: 188 PIPSYFP----------SSFP-----------------IQAGP-ESLSFADDDIIKTAMD 247
            + S  P          SSFP                 +   P +S S  DD I+KTAM 
Sbjct: 189 VVCSCCPYLRQCLMAPCSSFPAGLPGGSCAGRTCTDACLATSPGQSFSLEDDQIVKTAMG 248

Query: 248 SAERAISSVK-------TVKKEKESEKHDDGVMAQSGPVVYSETDLSAVFHAWYSAGFYT 258
           +AERA+SS+K        + ++K+ EK  +G MA+S     SETDL+ V +AWYSAGF+T
Sbjct: 249 TAERALSSMKMKISGDSNISEDKKDEKR-EGEMAES---TSSETDLTVVLNAWYSAGFFT 308

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g08810 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG08g08810 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6D7_CUCSA8.3e-7258.95Uncharacterized protein OS=Cucumis sativus GN=Csa_3G008290 PE=4 SV=1[more]
V4V2B3_9ROSI2.1e-2734.39Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001787mg PE=4 SV=1[more]
A0A067E8X5_CITSI2.1e-2734.39Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019321mg PE=4 SV=1[more]
A0A0B0NST2_GOSAR1.1e-2634.38Survival motor neuron OS=Gossypium arboreum GN=F383_18755 PE=4 SV=1[more]
A0A0D2TAT5_GOSRA2.4e-2635.03Uncharacterized protein OS=Gossypium raimondii GN=B456_008G224100 PE=4 SV=1[more]
BLAST of Cp4.1LG08g08810 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG08g08810 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659095546|ref|XP_008448638.1|7.5e-7460.56PREDICTED: uncharacterized protein LOC103490751 [Cucumis melo][more]
gi|449465900|ref|XP_004150665.1|1.2e-7158.95PREDICTED: uncharacterized protein LOC101203762 [Cucumis sativus][more]
gi|1009159279|ref|XP_015897726.1|4.6e-3138.41PREDICTED: uncharacterized protein LOC107431355 [Ziziphus jujuba][more]
gi|743809358|ref|XP_011018489.1|8.1e-2835.56PREDICTED: uncharacterized protein LOC105121518 [Populus euphratica][more]
gi|645265489|ref|XP_008238175.1|1.8e-2737.18PREDICTED: uncharacterized protein LOC103336837 isoform X2 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g08810.1Cp4.1LG08g08810.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 191..211
score: -coord: 100..120
scor
NoneNo IPR availablePANTHERPTHR39267FAMILY NOT NAMEDcoord: 2..253
score: 5.0
NoneNo IPR availablePANTHERPTHR39267:SF1SUBFAMILY NOT NAMEDcoord: 2..253
score: 5.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG08g08810Cucsa.322080Cucumber (Gy14) v1cgycpeB0854
Cp4.1LG08g08810CmaCh16G011890Cucurbita maxima (Rimu)cmacpeB363
Cp4.1LG08g08810CmaCh06G006270Cucurbita maxima (Rimu)cmacpeB852
Cp4.1LG08g08810CmoCh06G006360Cucurbita moschata (Rifu)cmocpeB797
Cp4.1LG08g08810CmoCh16G012370Cucurbita moschata (Rifu)cmocpeB327
Cp4.1LG08g08810Cla008836Watermelon (97103) v1cpewmB829
Cp4.1LG08g08810Csa3G008290Cucumber (Chinese Long) v2cpecuB863
Cp4.1LG08g08810MELO3C013823Melon (DHL92) v3.5.1cpemeB808
Cp4.1LG08g08810ClCG10G001280Watermelon (Charleston Gray)cpewcgB772
Cp4.1LG08g08810CSPI03G01330Wild cucumber (PI 183967)cpecpiB865
Cp4.1LG08g08810Lsi07G011620Bottle gourd (USVL1VR-Ls)cpelsiB725
Cp4.1LG08g08810MELO3C013823.2Melon (DHL92) v3.6.1cpemedB952
Cp4.1LG08g08810CsaV3_3G001350Cucumber (Chinese Long) v3cpecucB1059
Cp4.1LG08g08810Bhi07G000821Wax gourdcpewgoB1134
Cp4.1LG08g08810CsGy3G001220Cucumber (Gy14) v2cgybcpeB456
Cp4.1LG08g08810Carg23588Silver-seed gourdcarcpeB1463
Cp4.1LG08g08810Carg23401Silver-seed gourdcarcpeB1337
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG08g08810Cp4.1LG14g09790Cucurbita pepo (Zucchini)cpecpeB249
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG08g08810Melon (DHL92) v3.6.1cpemedB940
Cp4.1LG08g08810Silver-seed gourdcarcpeB1100
Cp4.1LG08g08810Cucumber (Chinese Long) v3cpecucB1062
Cp4.1LG08g08810Wax gourdcpewgoB1119
Cp4.1LG08g08810Cucurbita pepo (Zucchini)cpecpeB285
Cp4.1LG08g08810Cucurbita pepo (Zucchini)cpecpeB509
Cp4.1LG08g08810Cucumber (Gy14) v1cgycpeB0833
Cp4.1LG08g08810Cucurbita maxima (Rimu)cmacpeB555
Cp4.1LG08g08810Cucurbita maxima (Rimu)cmacpeB648
Cp4.1LG08g08810Cucurbita moschata (Rifu)cmocpeB509
Cp4.1LG08g08810Cucurbita moschata (Rifu)cmocpeB597
Cp4.1LG08g08810Wild cucumber (PI 183967)cpecpiB869
Cp4.1LG08g08810Cucumber (Chinese Long) v2cpecuB867
Cp4.1LG08g08810Bottle gourd (USVL1VR-Ls)cpelsiB695
Cp4.1LG08g08810Watermelon (Charleston Gray)cpewcgB764
Cp4.1LG08g08810Watermelon (97103) v1cpewmB826
Cp4.1LG08g08810Melon (DHL92) v3.5.1cpemeB799
Cp4.1LG08g08810Cucumber (Gy14) v2cgybcpeB460