Carg16933 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCCCTCCGTTCCACTTACAGAGATGAAGACGATGAAGAAGACGAGTCCGTTCCCGCTGCTGAAATCGACCCACCGGAGCTTCCTGAACCACCAATGGATGCGAATGTTAGCGGCTCCTCTACAGAGCCCCAGGATGGTACCAGACAAGACCCACCTGATGCTTCTGATGAAATCTCCGAAGAGGAACCGGCTTCTGATGACACTGAGAAATCGGCTAAATTAGCGAAGTCACCTGGGAACGACGACGACGATGACGAAAACCCACCTACGAAGAAGCGGAAGCAATTGTCTTCGCTTAATCAGCCTGTGGAGGAGGAGAAATCGCCATTGCTTGAATCGGATACTGCTAAGAACAATGGTTCGGCTAGTGGTAATGCTGCACAGGCGGCAACGGCTTTGAATCCTAAGAAATCGAAGAAGAAGAACAATAATGTTTGGGTTACGAAGTCGACTCGGAAGGGGAAAAAGAAGAACAAAGCTAATAACAATCACAATGCACCAACTGAGGATCCTGTCTTGATCACTCCAGTTCCGAGGTTCCCTGATAAAGGGGATGACAATTCCGATATGCAAATATGTTTGTCAAAGGTTTATAAGGCGGAGAAAGTTGAATTGAGTGATGACAGAATGAGTGCTGGTAGTACAAAGGGGTATAGAATGGTGAGGGCCACTAGAGGGGTGGAGGAAGGGGCATGGTATTTTGAAATCAAGGTGGTGAGCTTGGGGGAGACTGGACATACTCGGCTCGGATGGTCAACGGAGAAAGGGGACTTGCAGGCTCCGGTCGGGTACGACGGGAATAGCTTTGGGTATAGAGATATTGATGGAAGTAAGGTGCATAAGGCTTTAAGGGAGAAATATGGAGAGGAGGGATACAAGGAAGGTGATATCATTGGTTTCTATATCAATTTGCCTGATGGGGCTTTATATGCGCCCAAGCCGCCACACTTTGTTTGGTATAAGGGGCAGAGGTACATTTGTGCTCCTGAAGGGAAAGAGGAGCCGCCTAAAGTAGTTCCTGGTATGTTGGATTGCTTTACTAAATGCTGACAACTGATGCATTCTATGTTCATATTTCTTTTAAGTGAAGTTATTGAGGTTCTGCTGTGTGTTCATGCAAGCTCCATTGAAAACATTGAAACTGCGTTCTGATTGTTATATAATAGTTCATTGCCTCTTAACTTGTGTTATGCTAATTCCTTTTCAATTTTCAATTCTATAGTTGGAGTTAGGCTAAGTGTTGCGGTTCTTAATATTTGGACTGTTTTAGGACTTCCTAGTGTTAGCTAGTCCTGCTGCCCTGTGATACAAGTGATGAGAAAGAACAAAGTTTTGTCCCTACATGAGGCTAGAGGTAACAGACCAAGTCCACTGCTAGCAGATATCGTCTTTTTTGAGCTTTCCCTTTTGGGCTTCCCCTCAAGGTTTTTAAAACACGTTTGCTAGGGAGAGGTTTCCACACCCTTCTAAAGGGTGTTTCGTTCTCCTCCCCAGCCGATGTGGGATCTCACAATTCATTCCCCTTCGGGGCCTAGCGTCCTTGTCGGCACTCGTTTCTTTCTCCATGTGGGACGCTAGCACATCGCCTCATGTCCACCCCCCTTCGGGCTCAGCCTCCTTGCTGGTACATCGCCTGGTGTCTAGCTCTCATACTATTTGTAGTAGCCCAGGCTCACCTTTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGTCTTCCCCTCAAGGTTTTTAAAACGCGTCTACTAAAGAGAGGTTTCCACACCCTTATAAACGGTGTTTTGTTCTCTTCCCCAACCGATGTGAGATCTCACACAAGATCTCACTGGCTCGTGAGCAGGGCTGAGGTTTCAGCCAATTTCTGTCCCTGAAGTAGGCTGCTCTTGAGCTGCAATTGGTCAATCATGAAATTATAGCTTTTGTTCTTATTGTTATTTTACTTGAAGTTGCTTGCTACTTTAGTGACATTCGTTTTAAACTAAGGCACCTCTAGGATTATGCATCTGGTCGTGTTTCCATCTAACTTTGAGTCGTCAGACACTAACATAGTTGGGTGATTCTTGACGAATTTGCGCACTACGTATGGTGTTGCATTTGAGGAGAAAGGTTCTTTTTCTCTAGTTTATATTGTCTGTGATTGGTTGTGTTTGTCTAGTACGTGATAAAACTCAAGCCATGCTCCAAAGAAGTGGGTCAAGAGGGTAGTGAAGGACGAGAGGAGATAGCTCATGAACAGCAATGTAACAGCCCAAATCCACCGCTAGTAGATACTATCCTCTTTGGGGTTTCCTTTTCGAGCTGGATTGTGAGATCTCACATCGATTGGAGAAAGGAACGAGACTAACAAGGACGCTAGGCTCCGAAGGGGGGTGGATTGTGAGATCCCACGTCAGTTGGAGAGGAGAACAAACATTCTGTATAAGAGTGTGGAAATCTCTCCCTAGCAGATGCGTTTTAAAACCTTGAGGGGAAGCCCGGAAGGGAAAACCCAATATCTGCTAGCGGTGGGCTTGAGCTGTTACAAATGATATACGAGCCAAACACTGGGCGGTGTGCCAGCGAGGATGTTGGGCCTTGAGGGGGGGGGGGGAGTTGTTTTGTGAGATCTCCATCGGTTGGAGGGTGGAATGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACACATTTTAAAACCTTGAGGGGAAGTCCGGAAGGGAAAGCCCAAAGAGGACAATATCTACTAGCGGTGGACTTGGGCTGTTACAAGCCGAGCTGTGAGGTGGGCGTTTGGTTAAGAGGGTGTAGAGGGGTTAGCCCATGTGGCTATTTTCTTGGTAATGAAGGAAGATTCATTTCTTTTACCTGAATTGTTCTAATTTCAGCACTAATCAGTCCATTCTAGTGCAGAGTTGGAGACTGTCTGTTCTTTTGGTTCACATCTATTATCATTTAACAACCAACGATTATGAACAGTATGAGTCAACCGTCATGTTGGTTATATAGCGATGAACCGAGATTCAGGAACTCGATATAGATCCCCCAGAAATCTGTTGCATTTTGCCTTACATTTTTCATTCTCTCATCTCCCTTATGAAGTTACATGATGCGTCCGACATTCATTATGCAGGAAGCGAGATTTCGTTCTTCAAAAACGGAGTATGCCAAGGGGTTGCTTTCACAGATCTGAATGGAGGTCGCTATTATCCTGCAGCCTCCATGTACACTCTTCCTAATCAACCAAATTGTGTAGTCAAGTTCAACTTCGGCCCAGATTTCGAATCCTTTCCCGAGGACTTTCAGGGTCGTCCTTCGCCCCAACCCATGGTCGATGTACCTTACCATGGCTTCGACAACCAACCTGAAAACGGAGTTTCGAACGAGAAAAACACAGTAGTTACCAAGTAGTACCATCTTTTCTTTCATGTGTACTCTTAGTTTATGTGCATTAGGACTGACAATGGGAAGATGAGTGGTGTAAATTTTTCTAGTTACAGCTTACAATCAGCAGAAGAAAGCAATGTTCTATGTGAGTAGTGATAGACACTGCATGAGCCCAAACAACATTTGTCTGATTTGCTTATAAGTTCTTGAAGGCCAGACTCATGAGATATTCTAGTCATTTCATTTTTTATTCTCTTTTAGTAGGGACGTTTTAGCTATCGAGTTAAGACGTTTTAA ATGGATTCCCTCCGTTCCACTTACAGAGATGAAGACGATGAAGAAGACGAGTCCGTTCCCGCTGCTGAAATCGACCCACCGGAGCTTCCTGAACCACCAATGGATGCGAATGTTAGCGGCTCCTCTACAGAGCCCCAGGATGGTACCAGACAAGACCCACCTGATGCTTCTGATGAAATCTCCGAAGAGGAACCGGCTTCTGATGACACTGAGAAATCGGCTAAATTAGCGAAGTCACCTGGGAACGACGACGACGATGACGAAAACCCACCTACGAAGAAGCGGAAGCAATTGTCTTCGCTTAATCAGCCTGTGGAGGAGGAGAAATCGCCATTGCTTGAATCGGATACTGCTAAGAACAATGGTTCGGCTAGTGGTAATGCTGCACAGGCGGCAACGGCTTTGAATCCTAAGAAATCGAAGAAGAAGAACAATAATGTTTGGGTTACGAAGTCGACTCGGAAGGGGAAAAAGAAGAACAAAGCTAATAACAATCACAATGCACCAACTGAGGATCCTGTCTTGATCACTCCAGTTCCGAGGTTCCCTGATAAAGGGGATGACAATTCCGATATGCAAATATGTTTGTCAAAGGTTTATAAGGCGGAGAAAGTTGAATTGAGTGATGACAGAATGAGTGCTGGTAGTACAAAGGGGTATAGAATGGTGAGGGCCACTAGAGGGGTGGAGGAAGGGGCATGGTATTTTGAAATCAAGGTGGTGAGCTTGGGGGAGACTGGACATACTCGGCTCGGATGGTCAACGGAGAAAGGGGACTTGCAGGCTCCGGTCGGGTACGACGGGAATAGCTTTGGGTATAGAGATATTGATGGAAGTAAGGTGCATAAGGCTTTAAGGGAGAAATATGGAGAGGAGGGATACAAGGAAGGTGATATCATTGGTTTCTATATCAATTTGCCTGATGGGGCTTTATATGCGCCCAAGCCGCCACACTTTGTTTGGTATAAGGGGCAGAGGTACATTTGTGCTCCTGAAGGGAAAGAGGAGCCGCCTAAAGTAGTTCCTGGAAGCGAGATTTCGTTCTTCAAAAACGGAGTATGCCAAGGGGTTGCTTTCACAGATCTGAATGGAGGTCGCTATTATCCTGCAGCCTCCATGTACACTCTTCCTAATCAACCAAATTGTGTAGTCAAGTTCAACTTCGGCCCAGATTTCGAATCCTTTCCCGAGGACTTTCAGGGTCGTCCTTCGCCCCAACCCATGGTCGATGTACCTTACCATGGCTTCGACAACCAACCTGAAAACGGAGTTTCGAACGAGAAAAACACAGGACGTTTTAGCTATCGAGTTAAGACGTTTTAA ATGGATTCCCTCCGTTCCACTTACAGAGATGAAGACGATGAAGAAGACGAGTCCGTTCCCGCTGCTGAAATCGACCCACCGGAGCTTCCTGAACCACCAATGGATGCGAATGTTAGCGGCTCCTCTACAGAGCCCCAGGATGGTACCAGACAAGACCCACCTGATGCTTCTGATGAAATCTCCGAAGAGGAACCGGCTTCTGATGACACTGAGAAATCGGCTAAATTAGCGAAGTCACCTGGGAACGACGACGACGATGACGAAAACCCACCTACGAAGAAGCGGAAGCAATTGTCTTCGCTTAATCAGCCTGTGGAGGAGGAGAAATCGCCATTGCTTGAATCGGATACTGCTAAGAACAATGGTTCGGCTAGTGGTAATGCTGCACAGGCGGCAACGGCTTTGAATCCTAAGAAATCGAAGAAGAAGAACAATAATGTTTGGGTTACGAAGTCGACTCGGAAGGGGAAAAAGAAGAACAAAGCTAATAACAATCACAATGCACCAACTGAGGATCCTGTCTTGATCACTCCAGTTCCGAGGTTCCCTGATAAAGGGGATGACAATTCCGATATGCAAATATGTTTGTCAAAGGTTTATAAGGCGGAGAAAGTTGAATTGAGTGATGACAGAATGAGTGCTGGTAGTACAAAGGGGTATAGAATGGTGAGGGCCACTAGAGGGGTGGAGGAAGGGGCATGGTATTTTGAAATCAAGGTGGTGAGCTTGGGGGAGACTGGACATACTCGGCTCGGATGGTCAACGGAGAAAGGGGACTTGCAGGCTCCGGTCGGGTACGACGGGAATAGCTTTGGGTATAGAGATATTGATGGAAGTAAGGTGCATAAGGCTTTAAGGGAGAAATATGGAGAGGAGGGATACAAGGAAGGTGATATCATTGGTTTCTATATCAATTTGCCTGATGGGGCTTTATATGCGCCCAAGCCGCCACACTTTGTTTGGTATAAGGGGCAGAGGTACATTTGTGCTCCTGAAGGGAAAGAGGAGCCGCCTAAAGTAGTTCCTGGAAGCGAGATTTCGTTCTTCAAAAACGGAGTATGCCAAGGGGTTGCTTTCACAGATCTGAATGGAGGTCGCTATTATCCTGCAGCCTCCATGTACACTCTTCCTAATCAACCAAATTGTGTAGTCAAGTTCAACTTCGGCCCAGATTTCGAATCCTTTCCCGAGGACTTTCAGGGTCGTCCTTCGCCCCAACCCATGGTCGATGTACCTTACCATGGCTTCGACAACCAACCTGAAAACGGAGTTTCGAACGAGAAAAACACAGGACGTTTTAGCTATCGAGTTAAGACGTTTTAA MDSLRSTYRDEDDEEDESVPAAEIDPPELPEPPMDANVSGSSTEPQDGTRQDPPDASDEISEEEPASDDTEKSAKLAKSPGNDDDDDENPPTKKRKQLSSLNQPVEEEKSPLLESDTAKNNGSASGNAAQAATALNPKKSKKKNNNVWVTKSTRKGKKKNKANNNHNAPTEDPVLITPVPRFPDKGDDNSDMQICLSKVYKAEKVELSDDRMSAGSTKGYRMVRATRGVEEGAWYFEIKVVSLGETGHTRLGWSTEKGDLQAPVGYDGNSFGYRDIDGSKVHKALREKYGEEGYKEGDIIGFYINLPDGALYAPKPPHFVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTLPNQPNCVVKFNFGPDFESFPEDFQGRPSPQPMVDVPYHGFDNQPENGVSNEKNTGRFSYRVKTF
BLAST of Carg16933 vs. NCBI nr
Match: XP_023516888.1 (protein TRAUCO-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 617.1 bits (1590), Expect = 4.7e-173 Identity = 429/430 (99.77%), Postives = 430/430 (100.00%), Query Frame = 0
BLAST of Carg16933 vs. NCBI nr
Match: XP_022960791.1 (protein TRAUCO-like [Cucurbita moschata]) HSP 1 Score: 609.0 bits (1569), Expect = 1.3e-170 Identity = 426/430 (99.07%), Postives = 427/430 (99.30%), Query Frame = 0
BLAST of Carg16933 vs. NCBI nr
Match: XP_022988119.1 (protein TRAUCO-like [Cucurbita maxima]) HSP 1 Score: 600.9 bits (1548), Expect = 3.5e-168 Identity = 423/430 (98.37%), Postives = 424/430 (98.60%), Query Frame = 0
BLAST of Carg16933 vs. NCBI nr
Match: XP_022154374.1 (protein TRAUCO [Momordica charantia]) HSP 1 Score: 584.7 bits (1506), Expect = 2.6e-163 Identity = 413/430 (96.05%), Postives = 420/430 (97.67%), Query Frame = 0
BLAST of Carg16933 vs. NCBI nr
Match: XP_008450408.1 (PREDICTED: protein TRAUCO [Cucumis melo]) HSP 1 Score: 574.7 bits (1480), Expect = 2.7e-160 Identity = 409/430 (95.12%), Postives = 419/430 (97.44%), Query Frame = 0
BLAST of Carg16933 vs. TAIR10
Match: AT1G51450.1 (TRAUCO) HSP 1 Score: 458.4 bits (1178), Expect = 5.1e-129 Identity = 209/260 (80.38%), Postives = 234/260 (90.00%), Query Frame = 0
BLAST of Carg16933 vs. TAIR10
Match: AT2G22010.2 (related to KPC1) HSP 1 Score: 43.9 bits (102), Expect = 3.0e-04 Identity = 56/201 (27.86%), Postives = 80/201 (39.80%), Query Frame = 0
BLAST of Carg16933 vs. Swiss-Prot
Match: sp|Q9C8J7|TRO_ARATH (Protein TRAUCO OS=Arabidopsis thaliana OX=3702 GN=TRO PE=1 SV=1) HSP 1 Score: 458.4 bits (1178), Expect = 9.1e-128 Identity = 209/260 (80.38%), Postives = 234/260 (90.00%), Query Frame = 0
BLAST of Carg16933 vs. Swiss-Prot
Match: sp|Q9UBL3|ASH2L_HUMAN (Set1/Ash2 histone methyltransferase complex subunit ASH2 OS=Homo sapiens OX=9606 GN=ASH2L PE=1 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 2.7e-39 Identity = 91/235 (38.72%), Postives = 133/235 (56.60%), Query Frame = 0
BLAST of Carg16933 vs. Swiss-Prot
Match: sp|Q91X20|ASH2L_MOUSE (Set1/Ash2 histone methyltransferase complex subunit ASH2 OS=Mus musculus OX=10090 GN=Ash2l PE=1 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 4.7e-39 Identity = 90/235 (38.30%), Postives = 132/235 (56.17%), Query Frame = 0
BLAST of Carg16933 vs. Swiss-Prot
Match: sp|Q94545|ASH2_DROME (Set1/Ash2 histone methyltransferase complex subunit ASH2 OS=Drosophila melanogaster OX=7227 GN=ash2 PE=1 SV=2) HSP 1 Score: 139.0 bits (349), Expect = 1.2e-31 Identity = 80/205 (39.02%), Postives = 115/205 (56.10%), Query Frame = 0
BLAST of Carg16933 vs. Swiss-Prot
Match: sp|G5EFZ3|ASH2_CAEEL (Set1/Ash2 histone methyltransferase complex subunit ash-2 OS=Caenorhabditis elegans OX=6239 GN=ash-2 PE=1 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 4.5e-26 Identity = 71/213 (33.33%), Postives = 104/213 (48.83%), Query Frame = 0
BLAST of Carg16933 vs. TrEMBL
Match: tr|A0A1S3BPT9|A0A1S3BPT9_CUCME (protein TRAUCO OS=Cucumis melo OX=3656 GN=LOC103492020 PE=4 SV=1) HSP 1 Score: 574.7 bits (1480), Expect = 1.8e-160 Identity = 409/430 (95.12%), Postives = 419/430 (97.44%), Query Frame = 0
BLAST of Carg16933 vs. TrEMBL
Match: tr|A0A0A0LXF1|A0A0A0LXF1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G615190 PE=4 SV=1) HSP 1 Score: 568.5 bits (1464), Expect = 1.3e-158 Identity = 406/430 (94.42%), Postives = 416/430 (96.74%), Query Frame = 0
BLAST of Carg16933 vs. TrEMBL
Match: tr|A0A2P5CDE7|A0A2P5CDE7_PARAD (SPRY domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_162050 PE=4 SV=1) HSP 1 Score: 497.3 bits (1279), Expect = 3.6e-137 Identity = 227/263 (86.31%), Postives = 243/263 (92.40%), Query Frame = 0
BLAST of Carg16933 vs. TrEMBL
Match: tr|A0A2P5EUC2|A0A2P5EUC2_9ROSA (Concanavalin A-like lectin OS=Trema orientalis OX=63057 GN=TorRG33x02_150050 PE=4 SV=1) HSP 1 Score: 496.1 bits (1276), Expect = 8.0e-137 Identity = 227/263 (86.31%), Postives = 243/263 (92.40%), Query Frame = 0
BLAST of Carg16933 vs. TrEMBL
Match: tr|A0A0B0NGF2|A0A0B0NGF2_GOSAR (Set1/Ash2 histone methyltransferase complex subunit ASH2 OS=Gossypium arboreum OX=29729 GN=F383_19344 PE=4 SV=1) HSP 1 Score: 495.4 bits (1274), Expect = 1.4e-136 Identity = 229/258 (88.76%), Postives = 241/258 (93.41%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|