Carg25440 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCCCTCCGTTCCAATTACAGAGATGAAGATGATGAAGGCGACTCCATTCGCGCCGCTGAGATCGACCCACTTGACCCTTCTGATCCGCCATTGGATGTGAATCTAACCGAGCCCCCGAACGGTACCAGACAACACCCACCCGATGCCTCTGAAGAAATCTCCGAAGAAGAACCCGCCTCCGATGACACAAAATCCGCTAAATTGACGAAGTCCCCTGGGAATGACGACGGCGAAGAAGGCCCGACTCCGAAAAAGCAGAAGCAGTTGTCTTCGCTTAACAAACCTGCAGGGGAGGAGAAATCGCCATTGCCGGCATCCACAACGGCGGCTAAGAACAACAGGTCAGCTAGTGGCAATGTTGCACCAAAGAAATCGAAGAAGAAGAATAATAATGTTTGGGCTACTAAATCGAGCCGGAAGGGGAAAAAGAAGAACAAAGCTAATAACAATCACAATGCCCCCACTGAGGATCCTGTTTTGATCACTCCAGTTCCAAGGTTCTCCGATAAAGGAGACGACAATTCCAGTATGCAAATATGTTTGTCAAAAGTGTACAAGGCGGAGAAAGTTGAATTGAGTGATGACAGAATGAGTGGTGGTAGTACAAAGGGGTATAGAATGGTGAGAGCTACTAGAGGGGTGGAGGAAGGGGCATGGTATTTTGAAATCAAGGTTGTAAGCTTGGGGGAGACCGGGCATACTCGGCTCGGATGGTCGATGGAGAAAGGGGACTTGCAGGCGCCGGTCGGGTACGATGGGAATAGTTTTGGATACAGAGATATTGATGGAAGTAAGGTGCATAAGGCTTTAAGGGAGAAATATGGAGAGGAGGGATATAAGGAAGGTGATGTTCTTGGTTTTTATATCAATTTGCCGGATGGGGCTTCATATGCGCCCAAGTCACCGCACTATGTTTGGTATAAGGGGCAGAGGTACATTTGTGCTCCTGAAGGGAAAGAGGAGCCTCCTAAAGTAGTTCCTGGTATGTTGGATTGCTTTACTAAATGCTGACAATTGATGCATTCTATGTTCAATTTTCTTGAGTAGTTGAGATTCTGCTTTATGTTCTATGCAAGCTCTATGGAAGCCATTTCATGTGCATCTTGATTGTTATATAGATAGTTCTTTTCCACGGGAAGGAGAACGAAATACCCTTTATAAGAGTGTGGAAACCTCTCCCTAGCATACGCGTTTTTAAAACCTTGAGGGGAAGCCCCTAGCGGAGGCCTTTGGACCATTACAAATGGTGTCAGAGCCAAATACCGAGCGATGTGCCAGCGAAGAGGTTGAGCCCCGAAGGTGGGTGGACACAAGGCGGTGTGCCAGCAAGGACGCTGAGCCCTGAAGGGGGTGGACACTAGGAGGTGTGCCAGCAAGGACGCTGAGTCCTGAAGGAGGGTGGATTGTGAGATCCCACGTCGGTTGGGGAGGAGAACGAAATACCCTTTATAAGGGTGTAGAAACCTCTCCCTAGCAAACGCTTTTTAAAAAACCTTGAGGGGAAAGCTCAAAGAGTACAATATTTGCTAGCAGTAGGTTTGAGCCGTTACATTTTTTTTTTTTTTTTTATGCTCGATTTTTCAATTCGGTTGTCCAAGCTAGTTTGAAGAAATGTTGCTGTTCCTGATATTTAGATTGCTTTAAGGATTTCCTAGTTAGCCACTCCTGCAGCCCTGTGACACAAATGGTGAGAAAAAAACACAGTTTTGGCCCATGAGGCAAGATCTCACTGGCTGGCAAGCAGGGTTGAGATTGCAGCCCAGTTCTGCCCCTGAAGTAGGCTGCCCTTTGAGCTGCAATTGATCAATCATGAAAGTATAGCTTTTTGAAAAGAACAAACTTGAAGTTACTATAGGCCTTATTGACATTCGTTTTAAATTGAGATTCCTCTAAGATTATGTGTTGCATCGGTTTGCATTTTCTTCTAAAGTCGAGTCATTTGACACTGATATAGTTTGAAGGTTCATTTCGACACTACGTATAGTGTTGCATTTGGGGAGAAACGTTCTTTTTTCCTATTCATTTGGCCAAGGGGGGATGTAGTTTTCCCGACCGAGATACCTCGGTTGGTACAGAGAGACCATTTCATAGCTGAGCTATACTGCAAGAGCAATTTGAAATCCTTTTACCATGCATAATGAGAAAGATGATCTATAGAAATAGGGTATACAGATCAATAAGTGAAACTCATAAGCATGCTGTGTCCAATTTATCTGATTCTTTGTATGTGTACAAATGGTTGTATGTTTTAGTAGGTGATAAAACTCAAGCCAACCATGCAATTCACTTAGGGCATGTTCGAGAATGATTTTGGACATGTCGTTATTTCAGGAGGAATAATCGCTCCGAGGAAGTGGGGATGAGGGTACCGAAGAGCTATCGGTTGGGAGAGAGGGGTTAGCTTGTTAACAGTAGTGCAAGGAAATAATTGTGAGATCCCACATCGGTTGAGGAGGAGAACGAAACGTTCTTATAAGGGGTGGAAACCTCTCCCTAACAGACACGGTTTAAAAACCTTGAGGGGAAGCCTGAAAAAAAAAAAAAAGACCCAAAGAGGACAAATATCTGCTAGCGGTGAGCTTGAGCTGTTAGGAGTAGCTTGGTGCTGATGTTTCCTTTTTTTTAGTCTGTTCTTTTGGGTCACATCTATTATCATTTAACAAGGTTCTGGCATGAGTGGTTCGACTATTTTTTCGTTACTGAATTAGGCATTTGTTACAATTTATTAACCAACCATTTTCGACACTACGTGTCGACTGTCAAGTCGGTTATATAGCGATGAGGATTAGGAACTCGATGTGTTGCATCTTCTTGCCTTATGCTTTCCATTCTTGTTTCTTCTTTCCCCAGTTCTAGTTTAGTTCTTGATCAGAGTATCGTCCCCTCTCTAAAGTTAAATGATGTGTTCGACATTCGTTGTGCAGGAAGCGAGATTTCGTTCTTCAAAAACGGAGTATGCCAAGGGGTTGCGTTTACAGATCTGAACGGAGGTCGCTATTATCCTGCAGCCTCAATGTACACTCAACCGAATCAACCAAATTGTGTTGTCAAGTTCAACTTCGGCCCTGATTTCGAATTCTTTCCAGAGGACTTTCAAGGTCGTCGTTTGCCACAACCCATGGTCGAAGTACCTTACCACGGATTCGACAAACAAGTCGAAAACGGAGAGAAAAATACAGTAGTCGCC ATGGATTCCCTCCGTTCCAATTACAGAGATGAAGATGATGAAGGCGACTCCATTCGCGCCGCTGAGATCGACCCACTTGACCCTTCTGATCCGCCATTGGATGTGAATCTAACCGAGCCCCCGAACGGTACCAGACAACACCCACCCGATGCCTCTGAAGAAATCTCCGAAGAAGAACCCGCCTCCGATGACACAAAATCCGCTAAATTGACGAAGTCCCCTGGGAATGACGACGGCGAAGAAGGCCCGACTCCGAAAAAGCAGAAGCAGTTGTCTTCGCTTAACAAACCTGCAGGGGAGGAGAAATCGCCATTGCCGGCATCCACAACGGCGGCTAAGAACAACAGGTCAGCTAGTGGCAATGTTGCACCAAAGAAATCGAAGAAGAAGAATAATAATGTTTGGGCTACTAAATCGAGCCGGAAGGGGAAAAAGAAGAACAAAGCTAATAACAATCACAATGCCCCCACTGAGGATCCTGTTTTGATCACTCCAGTTCCAAGGTTCTCCGATAAAGGAGACGACAATTCCAGTATGCAAATATGTTTGTCAAAAGTGTACAAGGCGGAGAAAGTTGAATTGAGTGATGACAGAATGAGTGGTGGTAGTACAAAGGGGTATAGAATGGTGAGAGCTACTAGAGGGGTGGAGGAAGGGGCATGGTATTTTGAAATCAAGGTTGTAAGCTTGGGGGAGACCGGGCATACTCGGCTCGGATGGTCGATGGAGAAAGGGGACTTGCAGGCGCCGGTCGGGTACGATGGGAATAGTTTTGGATACAGAGATATTGATGGAAGTAAGGTGCATAAGGCTTTAAGGGAGAAATATGGAGAGGAGGGATATAAGGAAGGTGATGTTCTTGGTTTTTATATCAATTTGCCGGATGGGGCTTCATATGCGCCCAAGTCACCGCACTATGTTTGGTATAAGGGGCAGAGGTACATTTGTGCTCCTGAAGGGAAAGAGGAGCCTCCTAAAGTAGTTCCTGGAAGCGAGATTTCGTTCTTCAAAAACGGAGTATGCCAAGGGGTTGCGTTTACAGATCTGAACGGAGGTCGCTATTATCCTGCAGCCTCAATGTACACTCAACCGAATCAACCAAATTGTGTTGTCAAGTTCAACTTCGGCCCTGATTTCGAATTCTTTCCAGAGGACTTTCAAGGTCGTCGTTTGCCACAACCCATGGTCGAAGTACCTTACCACGGATTCGACAAACAAGTCGAAAACGGAGAGAAAAATACAGTAGTCGCC ATGGATTCCCTCCGTTCCAATTACAGAGATGAAGATGATGAAGGCGACTCCATTCGCGCCGCTGAGATCGACCCACTTGACCCTTCTGATCCGCCATTGGATGTGAATCTAACCGAGCCCCCGAACGGTACCAGACAACACCCACCCGATGCCTCTGAAGAAATCTCCGAAGAAGAACCCGCCTCCGATGACACAAAATCCGCTAAATTGACGAAGTCCCCTGGGAATGACGACGGCGAAGAAGGCCCGACTCCGAAAAAGCAGAAGCAGTTGTCTTCGCTTAACAAACCTGCAGGGGAGGAGAAATCGCCATTGCCGGCATCCACAACGGCGGCTAAGAACAACAGGTCAGCTAGTGGCAATGTTGCACCAAAGAAATCGAAGAAGAAGAATAATAATGTTTGGGCTACTAAATCGAGCCGGAAGGGGAAAAAGAAGAACAAAGCTAATAACAATCACAATGCCCCCACTGAGGATCCTGTTTTGATCACTCCAGTTCCAAGGTTCTCCGATAAAGGAGACGACAATTCCAGTATGCAAATATGTTTGTCAAAAGTGTACAAGGCGGAGAAAGTTGAATTGAGTGATGACAGAATGAGTGGTGGTAGTACAAAGGGGTATAGAATGGTGAGAGCTACTAGAGGGGTGGAGGAAGGGGCATGGTATTTTGAAATCAAGGTTGTAAGCTTGGGGGAGACCGGGCATACTCGGCTCGGATGGTCGATGGAGAAAGGGGACTTGCAGGCGCCGGTCGGGTACGATGGGAATAGTTTTGGATACAGAGATATTGATGGAAGTAAGGTGCATAAGGCTTTAAGGGAGAAATATGGAGAGGAGGGATATAAGGAAGGTGATGTTCTTGGTTTTTATATCAATTTGCCGGATGGGGCTTCATATGCGCCCAAGTCACCGCACTATGTTTGGTATAAGGGGCAGAGGTACATTTGTGCTCCTGAAGGGAAAGAGGAGCCTCCTAAAGTAGTTCCTGGAAGCGAGATTTCGTTCTTCAAAAACGGAGTATGCCAAGGGGTTGCGTTTACAGATCTGAACGGAGGTCGCTATTATCCTGCAGCCTCAATGTACACTCAACCGAATCAACCAAATTGTGTTGTCAAGTTCAACTTCGGCCCTGATTTCGAATTCTTTCCAGAGGACTTTCAAGGTCGTCGTTTGCCACAACCCATGGTCGAAGTACCTTACCACGGATTCGACAAACAAGTCGAAAACGGAGAGAAAAATACAGTAGTCGCC MDSLRSNYRDEDDEGDSIRAAEIDPLDPSDPPLDVNLTEPPNGTRQHPPDASEEISEEEPASDDTKSAKLTKSPGNDDGEEGPTPKKQKQLSSLNKPAGEEKSPLPASTTAAKNNRSASGNVAPKKSKKKNNNVWATKSSRKGKKKNKANNNHNAPTEDPVLITPVPRFSDKGDDNSSMQICLSKVYKAEKVELSDDRMSGGSTKGYRMVRATRGVEEGAWYFEIKVVSLGETGHTRLGWSMEKGDLQAPVGYDGNSFGYRDIDGSKVHKALREKYGEEGYKEGDVLGFYINLPDGASYAPKSPHYVWYKGQRYICAPEGKEEPPKVVPGSEISFFKNGVCQGVAFTDLNGGRYYPAASMYTQPNQPNCVVKFNFGPDFEFFPEDFQGRRLPQPMVEVPYHGFDKQVENGEKNTVVA
BLAST of Carg25440 vs. NCBI nr
Match: XP_023529538.1 (protein TRAUCO-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 661.0 bits (1704), Expect = 2.7e-186 Identity = 417/417 (100.00%), Postives = 417/417 (100.00%), Query Frame = 0
BLAST of Carg25440 vs. NCBI nr
Match: XP_022925791.1 (protein TRAUCO-like [Cucurbita moschata]) HSP 1 Score: 633.6 bits (1633), Expect = 4.6e-178 Identity = 366/422 (86.73%), Postives = 369/422 (87.44%), Query Frame = 0
BLAST of Carg25440 vs. NCBI nr
Match: XP_022967516.1 (protein TRAUCO-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 630.9 bits (1626), Expect = 3.0e-177 Identity = 373/421 (88.60%), Postives = 374/421 (88.84%), Query Frame = 0
BLAST of Carg25440 vs. NCBI nr
Match: XP_022154374.1 (protein TRAUCO [Momordica charantia]) HSP 1 Score: 522.7 bits (1345), Expect = 1.1e-144 Identity = 361/432 (83.56%), Postives = 372/432 (86.11%), Query Frame = 0
BLAST of Carg25440 vs. NCBI nr
Match: XP_023516888.1 (protein TRAUCO-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 522.7 bits (1345), Expect = 1.1e-144 Identity = 362/432 (83.80%), Postives = 372/432 (86.11%), Query Frame = 0
BLAST of Carg25440 vs. TAIR10
Match: AT1G51450.1 (TRAUCO) HSP 1 Score: 451.4 bits (1160), Expect = 5.9e-127 Identity = 207/257 (80.54%), Postives = 231/257 (89.88%), Query Frame = 0
BLAST of Carg25440 vs. TAIR10
Match: AT2G22010.2 (related to KPC1) HSP 1 Score: 42.4 bits (98), Expect = 8.2e-04 Identity = 54/201 (26.87%), Postives = 80/201 (39.80%), Query Frame = 0
BLAST of Carg25440 vs. Swiss-Prot
Match: sp|Q9C8J7|TRO_ARATH (Protein TRAUCO OS=Arabidopsis thaliana OX=3702 GN=TRO PE=1 SV=1) HSP 1 Score: 451.4 bits (1160), Expect = 1.1e-125 Identity = 207/257 (80.54%), Postives = 231/257 (89.88%), Query Frame = 0
BLAST of Carg25440 vs. Swiss-Prot
Match: sp|Q91X20|ASH2L_MOUSE (Set1/Ash2 histone methyltransferase complex subunit ASH2 OS=Mus musculus OX=10090 GN=Ash2l PE=1 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 5.2e-40 Identity = 88/210 (41.90%), Postives = 127/210 (60.48%), Query Frame = 0
BLAST of Carg25440 vs. Swiss-Prot
Match: sp|Q9UBL3|ASH2L_HUMAN (Set1/Ash2 histone methyltransferase complex subunit ASH2 OS=Homo sapiens OX=9606 GN=ASH2L PE=1 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 6.8e-40 Identity = 89/214 (41.59%), Postives = 128/214 (59.81%), Query Frame = 0
BLAST of Carg25440 vs. Swiss-Prot
Match: sp|Q94545|ASH2_DROME (Set1/Ash2 histone methyltransferase complex subunit ASH2 OS=Drosophila melanogaster OX=7227 GN=ash2 PE=1 SV=2) HSP 1 Score: 142.9 bits (359), Expect = 8.1e-33 Identity = 86/229 (37.55%), Postives = 123/229 (53.71%), Query Frame = 0
BLAST of Carg25440 vs. Swiss-Prot
Match: sp|G5EFZ3|ASH2_CAEEL (Set1/Ash2 histone methyltransferase complex subunit ash-2 OS=Caenorhabditis elegans OX=6239 GN=ash-2 PE=1 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 1.2e-25 Identity = 69/201 (34.33%), Postives = 97/201 (48.26%), Query Frame = 0
BLAST of Carg25440 vs. TrEMBL
Match: tr|A0A1S3BPT9|A0A1S3BPT9_CUCME (protein TRAUCO OS=Cucumis melo OX=3656 GN=LOC103492020 PE=4 SV=1) HSP 1 Score: 515.4 bits (1326), Expect = 1.2e-142 Identity = 358/431 (83.06%), Postives = 372/431 (86.31%), Query Frame = 0
BLAST of Carg25440 vs. TrEMBL
Match: tr|A0A0A0LXF1|A0A0A0LXF1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G615190 PE=4 SV=1) HSP 1 Score: 511.5 bits (1316), Expect = 1.7e-141 Identity = 355/431 (82.37%), Postives = 371/431 (86.08%), Query Frame = 0
BLAST of Carg25440 vs. TrEMBL
Match: tr|A0A061GTC2|A0A061GTC2_THECC (Set1/Ash2 histone methyltransferase complex subunit ASH2 OS=Theobroma cacao OX=3641 GN=TCM_040751 PE=4 SV=1) HSP 1 Score: 479.9 bits (1234), Expect = 5.6e-132 Identity = 222/254 (87.40%), Postives = 233/254 (91.73%), Query Frame = 0
BLAST of Carg25440 vs. TrEMBL
Match: tr|A0A2C9UHS3|A0A2C9UHS3_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G004000 PE=4 SV=1) HSP 1 Score: 478.0 bits (1229), Expect = 2.1e-131 Identity = 220/258 (85.27%), Postives = 233/258 (90.31%), Query Frame = 0
BLAST of Carg25440 vs. TrEMBL
Match: tr|V4U0J9|V4U0J9_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10014796mg PE=4 SV=1) HSP 1 Score: 476.5 bits (1225), Expect = 6.2e-131 Identity = 218/256 (85.16%), Postives = 233/256 (91.02%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |