Carg14744 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCAGCGGGCTCAACTTCACGAGCTTCTACGCCACCTGGTTCGACCACCTCCGCCACCTCATCCACCAGCTCTCCTCCACCCCCACTGACCACCACCACCACCTCGTCCACACCATCATCTCCCACTACTCCGAGTACTTCCGCGTCAAGTCCCTCGCCGCCGAGAAAGACCCTCTCTCCGTCTTCTCCGCCCCCTGGGCTACCTCCTTTGAACGCTCCCTTCATTGGGTAGCTGGTTGGCGTCCCACCACTACTTTTCACTTGATTTACTCCCAGTCAACCATTCTCTTTCAGTCCCAGATTGCCGATATTCTTCACGCTCCCCGCACCGGCGACCTTGGCGACCTCTCCCCCTCCCAGTTCCGCCGTGTCAGCGAGATCCAGTGCCAAACGGTAAATACCCTCTTCATTCATACATTATAATATATATTTTTAAGGCGATTTTAAGAAGTAACATGTAACAGTCCAAGCCCACCGCTAGTACATGTGGTAGAGAAAGGTTTACACCATTCATTCTTTCAAGGCACAGCGTCCTCGTTCACACTCGTTCCTTTCTCCAATCGATGTGGGACGCCACCAAATCCACCATTTCAAGGTCCAGCGTCCTTACTGCCACACCGTTTCGTGTCTACCTTTCGGGGAACAGTCTCCTTGCTAACACATAGTCCGATATCTAGCTCTGATACTATTTATAAAGACCTAGACCCGTCGCTAGCAAATAATGTCCTTTTTAGACTTTCCTTAGCTAGCAAATATTGTCATTTTTTTATTTTCCCGTGGAAGCTTTCCATCACATCATTGAAATGGCTTACGTGGGAATCAGTTTACTGAGTAAATTTGTGTAATTTTAGGAGAGAATTGTTATAGATTTGTTCGGGTAGATCAAGTTACTCACTTGTAAAGTTAACTTTACGAGAATTGTTTGACTTTACAAAAAAAAATTATTAGTGGTAATTTTAACCGAATTGTTAATAAATTTAGTAGAATAAGTTATTAACAACAGTACACACCATTGTGAACCAAGTTTTTTTTTACTTGTTTCAACGTATTTCGATGGAGGGTCATCTACGAGGTTTCATGCAGGTGGAGGAGGAAAATGCGATAACGGATGAGCTATCGGAGTGGCAAGACGAGGAGAGCGAGCTGATACAGAGGAGGGTGGAGGCGTCGGGGAAGGGTGAAGGTCTGGTTAGCATTATAAAGAAAGCGGACGATCTACGGCTGCGGACAGTGCAGAAGGTGGTGGAGCTTCTCACGCCGAAGCAGGCGGTGGAGTTCCTCATCGCCGCCGCCGAGCTCCAGTTTGGTGTTCGGGAGTGGGGGATGAATGAAGACCGTCAACGTGGCAATCATCCAGACACCTAA ATGAGCAGCGGGCTCAACTTCACGAGCTTCTACGCCACCTGGTTCGACCACCTCCGCCACCTCATCCACCAGCTCTCCTCCACCCCCACTGACCACCACCACCACCTCGTCCACACCATCATCTCCCACTACTCCGAGTACTTCCGCGTCAAGTCCCTCGCCGCCGAGAAAGACCCTCTCTCCGTCTTCTCCGCCCCCTGGGCTACCTCCTTTGAACGCTCCCTTCATTGGGTAGCTGGTTGGCGTCCCACCACTACTTTTCACTTGATTTACTCCCAGTCAACCATTCTCTTTCAGTCCCAGATTGCCGATATTCTTCACGCTCCCCGCACCGGCGACCTTGGCGACCTCTCCCCCTCCCAGTTCCGCCACGAGGAGAGCGAGCTGATACAGAGGAGGGTGGAGGCGTCGGGGAAGGGTGAAGGTCTGGTTAGCATTATAAAGAAAGCGGACGATCTACGGCTGCGGACAGTGCAGAAGGTGGTGGAGCTTCTCACGCCGAAGCAGGCGGTGGAGTTCCTCATCGCCGCCGCCGAGCTCCAGTTTGGTGTTCGGGAGTGGGGGATGAATGAAGACCGTCAACGTGGCAATCATCCAGACACCTAA ATGAGCAGCGGGCTCAACTTCACGAGCTTCTACGCCACCTGGTTCGACCACCTCCGCCACCTCATCCACCAGCTCTCCTCCACCCCCACTGACCACCACCACCACCTCGTCCACACCATCATCTCCCACTACTCCGAGTACTTCCGCGTCAAGTCCCTCGCCGCCGAGAAAGACCCTCTCTCCGTCTTCTCCGCCCCCTGGGCTACCTCCTTTGAACGCTCCCTTCATTGGGTAGCTGGTTGGCGTCCCACCACTACTTTTCACTTGATTTACTCCCAGTCAACCATTCTCTTTCAGTCCCAGATTGCCGATATTCTTCACGCTCCCCGCACCGGCGACCTTGGCGACCTCTCCCCCTCCCAGTTCCGCCACGAGGAGAGCGAGCTGATACAGAGGAGGGTGGAGGCGTCGGGGAAGGGTGAAGGTCTGGTTAGCATTATAAAGAAAGCGGACGATCTACGGCTGCGGACAGTGCAGAAGGTGGTGGAGCTTCTCACGCCGAAGCAGGCGGTGGAGTTCCTCATCGCCGCCGCCGAGCTCCAGTTTGGTGTTCGGGAGTGGGGGATGAATGAAGACCGTCAACGTGGCAATCATCCAGACACCTAA MSSGLNFTSFYATWFDHLRHLIHQLSSTPTDHHHHLVHTIISHYSEYFRVKSLAAEKDPLSVFSAPWATSFERSLHWVAGWRPTTTFHLIYSQSTILFQSQIADILHAPRTGDLGDLSPSQFRHEESELIQRRVEASGKGEGLVSIIKKADDLRLRTVQKVVELLTPKQAVEFLIAAAELQFGVREWGMNEDRQRGNHPDT
BLAST of Carg14744 vs. NCBI nr
Match: XP_022940748.1 (protein DOG1-like 4 [Cucurbita moschata]) HSP 1 Score: 344.0 bits (881), Expect = 3.5e-91 Identity = 191/226 (84.51%), Postives = 192/226 (84.96%), Query Frame = 0
BLAST of Carg14744 vs. NCBI nr
Match: XP_022981708.1 (protein DOG1-like 4 [Cucurbita maxima]) HSP 1 Score: 337.0 bits (863), Expect = 4.3e-89 Identity = 189/226 (83.63%), Postives = 193/226 (85.40%), Query Frame = 0
BLAST of Carg14744 vs. NCBI nr
Match: XP_023523447.1 (LOW QUALITY PROTEIN: protein DOG1-like 4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 313.5 bits (802), Expect = 5.1e-82 Identity = 169/232 (72.84%), Postives = 175/232 (75.43%), Query Frame = 0
BLAST of Carg14744 vs. NCBI nr
Match: XP_022935985.1 (protein DOG1-like 4 [Cucurbita moschata]) HSP 1 Score: 288.1 bits (736), Expect = 2.3e-74 Identity = 157/234 (67.09%), Postives = 172/234 (73.50%), Query Frame = 0
BLAST of Carg14744 vs. NCBI nr
Match: XP_023536480.1 (protein DOG1-like 4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 287.0 bits (733), Expect = 5.1e-74 Identity = 158/232 (68.10%), Postives = 174/232 (75.00%), Query Frame = 0
BLAST of Carg14744 vs. TAIR10
Match: AT3G14880.1 (BEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT4G18650.1)) HSP 1 Score: 159.1 bits (401), Expect = 2.9e-39 Identity = 94/234 (40.17%), Postives = 128/234 (54.70%), Query Frame = 0
BLAST of Carg14744 vs. TAIR10
Match: AT4G18650.1 (transcription factor-related) HSP 1 Score: 80.9 bits (198), Expect = 1.0e-15 Identity = 53/212 (25.00%), Postives = 91/212 (42.92%), Query Frame = 0
BLAST of Carg14744 vs. TAIR10
Match: AT5G65210.2 (bZIP transcription factor family protein) HSP 1 Score: 72.8 bits (177), Expect = 2.7e-13 Identity = 46/152 (30.26%), Postives = 72/152 (47.37%), Query Frame = 0
BLAST of Carg14744 vs. TAIR10
Match: AT1G58330.1 (transcription factor-related) HSP 1 Score: 71.6 bits (174), Expect = 6.1e-13 Identity = 62/231 (26.84%), Postives = 94/231 (40.69%), Query Frame = 0
BLAST of Carg14744 vs. TAIR10
Match: AT5G10030.1 (TGACG motif-binding factor 4) HSP 1 Score: 70.5 bits (171), Expect = 1.4e-12 Identity = 46/152 (30.26%), Postives = 71/152 (46.71%), Query Frame = 0
BLAST of Carg14744 vs. Swiss-Prot
Match: sp|Q84JC2|DOGL4_ARATH (Protein DOG1-like 4 OS=Arabidopsis thaliana OX=3702 GN=DOGL4 PE=2 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.8e-14 Identity = 53/212 (25.00%), Postives = 91/212 (42.92%), Query Frame = 0
BLAST of Carg14744 vs. Swiss-Prot
Match: sp|Q39237|TGA1_ARATH (Transcription factor TGA1 OS=Arabidopsis thaliana OX=3702 GN=TGA1 PE=1 SV=2) HSP 1 Score: 72.8 bits (177), Expect = 4.9e-12 Identity = 46/152 (30.26%), Postives = 72/152 (47.37%), Query Frame = 0
BLAST of Carg14744 vs. Swiss-Prot
Match: sp|Q39162|TGA4_ARATH (Transcription factor TGA4 OS=Arabidopsis thaliana OX=3702 GN=TGA4 PE=1 SV=2) HSP 1 Score: 70.5 bits (171), Expect = 2.4e-11 Identity = 46/152 (30.26%), Postives = 71/152 (46.71%), Query Frame = 0
BLAST of Carg14744 vs. Swiss-Prot
Match: sp|P14232|TGA1A_TOBAC (TGACG-sequence-specific DNA-binding protein TGA-1A OS=Nicotiana tabacum OX=4097 GN=TGA1A PE=1 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 9.3e-11 Identity = 42/153 (27.45%), Postives = 74/153 (48.37%), Query Frame = 0
BLAST of Carg14744 vs. Swiss-Prot
Match: sp|Q93XM6|TGA9_ARATH (Transcription factor TGA9 OS=Arabidopsis thaliana OX=3702 GN=TGA9 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 6.0e-10 Identity = 42/150 (28.00%), Postives = 71/150 (47.33%), Query Frame = 0
BLAST of Carg14744 vs. TrEMBL
Match: tr|A0A0A0L389|A0A0A0L389_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625020 PE=4 SV=1) HSP 1 Score: 266.9 bits (681), Expect = 3.6e-68 Identity = 141/225 (62.67%), Postives = 160/225 (71.11%), Query Frame = 0
BLAST of Carg14744 vs. TrEMBL
Match: tr|A0A1S3CLK4|A0A1S3CLK4_CUCME (transcription factor HBP-1b(C1) OS=Cucumis melo OX=3656 GN=LOC103501829 PE=4 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 8.9e-67 Identity = 141/232 (60.78%), Postives = 159/232 (68.53%), Query Frame = 0
BLAST of Carg14744 vs. TrEMBL
Match: tr|W9QBE8|W9QBE8_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_004349 PE=4 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 3.4e-58 Identity = 122/227 (53.74%), Postives = 147/227 (64.76%), Query Frame = 0
BLAST of Carg14744 vs. TrEMBL
Match: tr|M5WXN5|M5WXN5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G164300 PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 4.4e-58 Identity = 132/227 (58.15%), Postives = 156/227 (68.72%), Query Frame = 0
BLAST of Carg14744 vs. TrEMBL
Match: tr|A0A2P5FKY9|A0A2P5FKY9_9ROSA (TGA transcription factor OS=Trema orientalis OX=63057 GN=TorRG33x02_056910 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 5.8e-58 Identity = 122/224 (54.46%), Postives = 148/224 (66.07%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |