CmoCh09G006520 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGCTATCCTGATCTGTGTTTCTAGTAATTTCCACGAGTGGAACCCAAATGAGCAGCGGGTTCAACTTCACGGGCTTCTACGCCACCTGGTTTGACCATCTCCGCCACCTCATCCACCAGCTTTCCTCCACCACCACCGCCGCCAAAGAAAACCGATCCTCCACCACCGATGACCTCCGCCACCTCGTCCACACTGTCATGTCCCACTACAGCGATTACTACCACGTCAAGTCCCTCGCCGCCGAGCGCGACCCTCTCTCCGTCTTCTCCGCTCCTTGGGCTACCTCCCTGGAACGCTCCCTCCACTGGATCGCCGGCTGGCGACCCACCACCACGTTTCATCTCATCTACTCTGAATCCTCCATCCTTTTTGAATCACGTATCGTTGATATTCTCCATGGGCTTCGAACCGGCGACCTCGGTGACCTCTCCCCTTCTCAGTTTTGCCGTGTTAGCGAGCTCCAATGCCAAACTGTAAGCCCCTAACCCTCTTTTGCTTTATTTTTTGTTGCATTTCTTTTTTCAATTTCCTTTTTTTTTTAATACTCTTTAGAACACCCCAATAATTTTCAAAATTGAATAGAAATTAAAACCCAGATGTTGAATTCTTGAGTGAAAAAAATTACATATTCAAAACAAGCCCAGATAGCTCCGGGAGTCCGTCCCAAATGGGTTAATTTAGGGAATGATGCTGAGTGAGTTTATGGATGAATCCATTAGTACGAGACATTTTGGATAAACAAACGAACAAAATCACCAGAGTTTAGGCTCAAAATGAATAATATCATACTATTGTGGAGAGTCGTGATTCTTAACATGGTATCAGAGTCGTACCGATTTCAACTAGAAGTTGTAAGTAAGCCTTATAGTCAAAAGTGTCTTAAGTGTCAAATAAATAGGGTATTTTGTTCAAGAGCTCCAAAGAATGAGTCGAGTCGAGTCTCGATTGATGGATGGTTGTTCGACTTCAAGTGTCGAACAAATAAATTGTGAACCTCGAAGGTGTAGTCATTAGGGATGGTGGTTCGGCTCAAAGTGTCGAAAAAAGAAGAAGTAATCAAAAGGTGACTCAAATGTCACACCTTTAAGGGCTTATGAAGCGAACCTCGATTAAGGGGTGGCTGTTTGAGGGCTTCGTAGACTTAAGGGAGGCTTTATAGCGTACTTGTTCGTGAAAACTGTTAGAAGGGTCCCACTTTTTTTAATTGGTACGAGACCTTTTACCGAAAATATCATATCATTATGGATGGAGAGTCAGTGATTACTAACAAACCCTTCGAGCGAAATAAGAACCGTCGTCAAACATTAAAAAAAACAGAATTTGGGGTGTAATTTTTTTTGTTGAAGGGCGGTGGGAAATGTTTGATAGGTGGAGGAGGAGAATGCGATAACGGACGAGCTGTCGGAGTGGCAAGACAACGTGAGCGATCTGATCGGAACAAGGACGGAACTGACGGGGAAAGTGGAAGGTCTGGTGAGCATTATAAAGAAAGCCGACGATCTACGGCTGAGGACAGTGCAGAAGGTGGTGGAGCTTCTCACGCCAAAGCAGGCGGTGGAGTTCCTCATCGCCGCCGCCGAGCTCCAGTTCGGCGTTCGGGGATGGGGGCTGAATCAGGACCGTGAACGGAGCAATAATCGCGACGGTAACTAAAAGAAACATTAAATTCCCCGAAAAAGCAACCAAAAAACAGAGATTTGCTAATATATTTATGAATATTAATTTTCTTACAGAACTTGATCGGAAAAAAAATGAAGCCTTTCAGTGTTCTATTAACATAATTTAAATAAATTTTGAGGAGTTTTTATTTTTGTTCTTTAATTGTTTGAATAATTATCAGCTAAATATTTAATACAGTGGTAATCTTTGAGACGACACGTGGCGGACATGCAGGTATTGGTCTTGTATACGTGTCCCGACGTGACGTGGGCAGTTAAGTCGACGTCAGAAACTCAATAATGGAAGTTTAATGAATTATGTTTGCTTTAATTTGCTTAATTTTATATTTATTAGATTTTGCCTAATAGCTATGATATTATTAAAATAATTAAGAAGAATCTATTATAATTTGATATAAAATTTAAATTTTATATCAAATATATAACGATGTTACAAAAATCGAGCTCTAATCTAATTTAATCAATTTTATCTAATTTTATCAGCTGTATACCAC CCGCTATCCTGATCTGTGTTTCTAGTAATTTCCACGAGTGGAACCCAAATGAGCAGCGGGTTCAACTTCACGGGCTTCTACGCCACCTGGTTTGACCATCTCCGCCACCTCATCCACCAGCTTTCCTCCACCACCACCGCCGCCAAAGAAAACCGATCCTCCACCACCGATGACCTCCGCCACCTCGTCCACACTGTCATGTCCCACTACAGCGATTACTACCACGTCAAGTCCCTCGCCGCCGAGCGCGACCCTCTCTCCGTCTTCTCCGCTCCTTGGGCTACCTCCCTGGAACGCTCCCTCCACTGGATCGCCGGCTGGCGACCCACCACCACGTTTCATCTCATCTACTCTGAATCCTCCATCCTTTTTGAATCACGTATCGTTGATATTCTCCATGGGCTTCGAACCGGCGACCTCGGTGACCTCTCCCCTTCTCAGTTTTGCCGTGTTAGCGAGCTCCAATGCCAAACTGTGGAGGAGGAGAATGCGATAACGGACGAGCTGTCGGAGTGGCAAGACAACGTGAGCGATCTGATCGGAACAAGGACGGAACTGACGGGGAAAGTGGAAGGTCTGGTGAGCATTATAAAGAAAGCCGACGATCTACGGCTGAGGACAGTGCAGAAGGTGGTGGAGCTTCTCACGCCAAAGCAGGCGGTGGAGTTCCTCATCGCCGCCGCCGAGCTCCAGTTCGGCGTTCGGGGATGGGGGCTGAATCAGGACCGTGAACGGAGCAATAATCGCGACGGTAACTAAAAGAAACATTAAATTCCCCGAAAAAGCAACCAAAAAACAGAGATTTGCTAATATATTTATGAATATTAATTTTCTTACAGAACTTGATCGGAAAAAAAATGAAGCCTTTCAGTGTTCTATTAACATAATTTAAATAAATTTTGAGGAGTTTTTATTTTTGTTCTTTAATTGTTTGAATAATTATCAGCTAAATATTTAATACAGTGGTAATCTTTGAGACGACACGTGGCGGACATGCAGGTATTGGTCTTGTATACGTGTCCCGACGTGACGTGGGCAGTTAAGTCGACGTCAGAAACTCAATAATGGAAGTTTAATGAATTATGTTTGCTTTAATTTGCTTAATTTTATATTTATTAGATTTTGCCTAATAGCTATGATATTATTAAAATAATTAAGAAGAATCTATTATAATTTGATATAAAATTTAAATTTTATATCAAATATATAACGATGTTACAAAAATCGAGCTCTAATCTAATTTAATCAATTTTATCTAATTTTATCAGCTGTATACCAC ATGAGCAGCGGGTTCAACTTCACGGGCTTCTACGCCACCTGGTTTGACCATCTCCGCCACCTCATCCACCAGCTTTCCTCCACCACCACCGCCGCCAAAGAAAACCGATCCTCCACCACCGATGACCTCCGCCACCTCGTCCACACTGTCATGTCCCACTACAGCGATTACTACCACGTCAAGTCCCTCGCCGCCGAGCGCGACCCTCTCTCCGTCTTCTCCGCTCCTTGGGCTACCTCCCTGGAACGCTCCCTCCACTGGATCGCCGGCTGGCGACCCACCACCACGTTTCATCTCATCTACTCTGAATCCTCCATCCTTTTTGAATCACGTATCGTTGATATTCTCCATGGGCTTCGAACCGGCGACCTCGGTGACCTCTCCCCTTCTCAGTTTTGCCGTGTTAGCGAGCTCCAATGCCAAACTGTGGAGGAGGAGAATGCGATAACGGACGAGCTGTCGGAGTGGCAAGACAACGTGAGCGATCTGATCGGAACAAGGACGGAACTGACGGGGAAAGTGGAAGGTCTGGTGAGCATTATAAAGAAAGCCGACGATCTACGGCTGAGGACAGTGCAGAAGGTGGTGGAGCTTCTCACGCCAAAGCAGGCGGTGGAGTTCCTCATCGCCGCCGCCGAGCTCCAGTTCGGCGTTCGGGGATGGGGGCTGAATCAGGACCGTGAACGGAGCAATAATCGCGACGGTAACTAA
BLAST of CmoCh09G006520 vs. Swiss-Prot
Match: HBP1C_WHEAT (Transcription factor HBP-1b(c1) (Fragment) OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 82.4 bits (202), Expect = 7.2e-15 Identity = 55/203 (27.09%), Postives = 102/203 (50.25%), Query Frame = 1
BLAST of CmoCh09G006520 vs. Swiss-Prot
Match: TGA5_ARATH (Transcription factor TGA5 OS=Arabidopsis thaliana GN=TGA5 PE=1 SV=2) HSP 1 Score: 79.7 bits (195), Expect = 4.7e-14 Identity = 59/200 (29.50%), Postives = 100/200 (50.00%), Query Frame = 1
BLAST of CmoCh09G006520 vs. Swiss-Prot
Match: TGA1_ARATH (Transcription factor TGA1 OS=Arabidopsis thaliana GN=TGA1 PE=1 SV=2) HSP 1 Score: 77.8 bits (190), Expect = 1.8e-13 Identity = 52/183 (28.42%), Postives = 87/183 (47.54%), Query Frame = 1
BLAST of CmoCh09G006520 vs. Swiss-Prot
Match: TGA6_ARATH (Transcription factor TGA6 OS=Arabidopsis thaliana GN=TGA6 PE=1 SV=2) HSP 1 Score: 76.3 bits (186), Expect = 5.2e-13 Identity = 54/204 (26.47%), Postives = 103/204 (50.49%), Query Frame = 1
BLAST of CmoCh09G006520 vs. Swiss-Prot
Match: TGA2_ARATH (Transcription factor TGA2 OS=Arabidopsis thaliana GN=TGA2 PE=1 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 5.2e-13 Identity = 54/204 (26.47%), Postives = 103/204 (50.49%), Query Frame = 1
BLAST of CmoCh09G006520 vs. TrEMBL
Match: A0A0A0L389_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G625020 PE=4 SV=1) HSP 1 Score: 375.2 bits (962), Expect = 6.0e-101 Identity = 191/231 (82.68%), Postives = 209/231 (90.48%), Query Frame = 1
BLAST of CmoCh09G006520 vs. TrEMBL
Match: M5WXN5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022280mg PE=4 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 2.1e-82 Identity = 160/233 (68.67%), Postives = 188/233 (80.69%), Query Frame = 1
BLAST of CmoCh09G006520 vs. TrEMBL
Match: W9QBE8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004349 PE=4 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 1.5e-80 Identity = 156/233 (66.95%), Postives = 182/233 (78.11%), Query Frame = 1
BLAST of CmoCh09G006520 vs. TrEMBL
Match: A0A061FFR7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_031867 PE=4 SV=1) HSP 1 Score: 302.4 bits (773), Expect = 4.9e-79 Identity = 150/222 (67.57%), Postives = 179/222 (80.63%), Query Frame = 1
BLAST of CmoCh09G006520 vs. TrEMBL
Match: Q2HSA7_MEDTR (Transcription factor TGA5-like protein OS=Medicago truncatula GN=MTR_2g076140 PE=4 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 7.1e-78 Identity = 146/228 (64.04%), Postives = 178/228 (78.07%), Query Frame = 1
BLAST of CmoCh09G006520 vs. TAIR10
Match: AT3G14880.1 (AT3G14880.1 BEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT4G18650.1)) HSP 1 Score: 243.4 bits (620), Expect = 1.4e-64 Identity = 122/234 (52.14%), Postives = 164/234 (70.09%), Query Frame = 1
BLAST of CmoCh09G006520 vs. TAIR10
Match: AT4G18650.1 (AT4G18650.1 transcription factor-related) HSP 1 Score: 103.6 bits (257), Expect = 1.7e-22 Identity = 68/233 (29.18%), Postives = 111/233 (47.64%), Query Frame = 1
BLAST of CmoCh09G006520 vs. TAIR10
Match: AT4G18690.1 (AT4G18690.1 unknown protein) HSP 1 Score: 100.5 bits (249), Expect = 1.4e-21 Identity = 66/247 (26.72%), Postives = 118/247 (47.77%), Query Frame = 1
BLAST of CmoCh09G006520 vs. TAIR10
Match: AT4G18680.1 (AT4G18680.1 unknown protein) HSP 1 Score: 94.7 bits (234), Expect = 7.9e-20 Identity = 60/201 (29.85%), Postives = 104/201 (51.74%), Query Frame = 1
BLAST of CmoCh09G006520 vs. TAIR10
Match: AT5G06960.1 (AT5G06960.1 OCS-element binding factor 5) HSP 1 Score: 79.7 bits (195), Expect = 2.6e-15 Identity = 59/200 (29.50%), Postives = 100/200 (50.00%), Query Frame = 1
BLAST of CmoCh09G006520 vs. NCBI nr
Match: gi|449456699|ref|XP_004146086.1| (PREDICTED: transcription factor HBP-1b(c38) [Cucumis sativus]) HSP 1 Score: 375.2 bits (962), Expect = 8.6e-101 Identity = 191/231 (82.68%), Postives = 209/231 (90.48%), Query Frame = 1
BLAST of CmoCh09G006520 vs. NCBI nr
Match: gi|659127555|ref|XP_008463763.1| (PREDICTED: transcription factor TGA5 [Cucumis melo]) HSP 1 Score: 373.6 bits (958), Expect = 2.5e-100 Identity = 191/233 (81.97%), Postives = 204/233 (87.55%), Query Frame = 1
BLAST of CmoCh09G006520 vs. NCBI nr
Match: gi|1009161847|ref|XP_015899114.1| (PREDICTED: transcription factor TGA7, partial [Ziziphus jujuba]) HSP 1 Score: 332.0 bits (850), Expect = 8.3e-88 Identity = 165/226 (73.01%), Postives = 191/226 (84.51%), Query Frame = 1
BLAST of CmoCh09G006520 vs. NCBI nr
Match: gi|595884135|ref|XP_007212919.1| (hypothetical protein PRUPE_ppa022280mg [Prunus persica]) HSP 1 Score: 313.5 bits (802), Expect = 3.1e-82 Identity = 160/233 (68.67%), Postives = 188/233 (80.69%), Query Frame = 1
BLAST of CmoCh09G006520 vs. NCBI nr
Match: gi|657988198|ref|XP_008386261.1| (PREDICTED: transcription factor TGA5-like [Malus domestica]) HSP 1 Score: 313.2 bits (801), Expect = 4.0e-82 Identity = 159/230 (69.13%), Postives = 185/230 (80.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |