CsaV3_UNG168290 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CACAAGAAGAAGAAGAAGCTCGCAGGCATGAGCGAACGAGTAAAGAGTGTGGCAGAAAGAAAAAGGTTGCCAAAAATAAAGAGGTTGACCGCTTGAAGGTTGTGGTGGAAAAGTTTGGTGAAGAATTTGAGAGGACAAGTCCTCTAAAGCCAAGGTCGTGGCCTAAAGAATTCAAACTTGTTGATCCCTCACAACCAAAGAAAGGCAAGGGCGAAGCGGGAACATCTAGACTTGAGGATGTTGAAGAGAGTGAACCTCAAAGTGCCCAAGAGTTGCACAAGCTTATCAAAACAGAGAAATGA CAAGAAGAAGAAGAAGCTCGCAGGCATGAGCGAACGAGTAAAGAGTGTGGCAGAAAGAAAAAGGTTGCCAAAAATAAAGAGGTTGACCGCTTGAAGGTTGTGGTGGAAAAGTTTGGTGAAGAATTTGAGAGGACAAGTCCTCTAAAGCCAAGGTCGTGGCCTAAAGAATTCAAACTTGTTGATCCCTCACAACCAAAGAAAGGCAAGGGCGAAGCGGGAACATCTAGACTTGAGGATGTTGAAGAGAGTGAACCTCAAAGTGCCCAAGAGTTGCACAAGCTTATCAAAACAGAGAAATGA CAAGAAGAAGAAGAAGCTCGCAGGCATGAGCGAACGAGTAAAGAGTGTGGCAGAAAGAAAAAGGTTGCCAAAAATAAAGAGGTTGACCGCTTGAAGGTTGTGGTGGAAAAGTTTGGTGAAGAATTTGAGAGGACAAGTCCTCTAAAGCCAAGGTCGTGGCCTAAAGAATTCAAACTTGTTGATCCCTCACAACCAAAGAAAGGCAAGGGCGAAGCGGGAACATCTAGACTTGAGGATGTTGAAGAGAGTGAACCTCAAAGTGCCCAAGAGTTGCACAAGCTTATCAAAACAGAGAAATGA QEEEEARRHERTSKECGRKKKVAKNKEVDRLKVVVEKFGEEFERTSPLKPRSWPKEFKLVDPSQPKKGKGEAGTSRLEDVEESEPQSAQELHKLIKTEK
BLAST of CsaV3_UNG168290 vs. NCBI nr
Match: KGN49573.1 (hypothetical protein Csa_5G003650 [Cucumis sativus]) HSP 1 Score: 163.3 bits (412), Expect = 4.2e-37 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of CsaV3_UNG168290 vs. NCBI nr
Match: KGN46665.1 (hypothetical protein Csa_6G119890 [Cucumis sativus]) HSP 1 Score: 62.8 bits (151), Expect = 7.8e-07 Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 0
BLAST of CsaV3_UNG168290 vs. NCBI nr
Match: KGN57723.1 (hypothetical protein Csa_3G263210 [Cucumis sativus]) HSP 1 Score: 62.0 bits (149), Expect = 1.3e-06 Identity = 35/70 (50.00%), Postives = 47/70 (67.14%), Query Frame = 0
BLAST of CsaV3_UNG168290 vs. TrEMBL
Match: tr|A0A0A0KJ65|A0A0A0KJ65_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G003650 PE=4 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 2.8e-37 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of CsaV3_UNG168290 vs. TrEMBL
Match: tr|A0A0A0KAB8|A0A0A0KAB8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G119890 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 5.1e-07 Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 0
BLAST of CsaV3_UNG168290 vs. TrEMBL
Match: tr|A0A0A0L7E0|A0A0A0L7E0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G263210 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 8.8e-07 Identity = 35/70 (50.00%), Postives = 47/70 (67.14%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |