CsaV3_7G012690 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G012690
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 6673146 .. 6673395 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATTGTGCTTCAGTTTAGAAGTACTTGAGGCTGTATTAATAGCATATTGTGATGCTGCTGACAGTTGTTTTCAAGGTAATGGTAATTTCTATGGAAGACTTGTGCATCATTTTCTCATCAGTAAATGTTCATGTTGTTAGATTGTTACATTCTTTGTTAGGAATTTGGAGTAACGTAAATGACCCTATCGAGAAATTAGATGTTGTTATCCATGCGACTTTAGTGTCTTCATGTTGCAACTTGTAA

mRNA sequence

ATGAAATTGTGCTTCAGTTTAGAAGTACTTGAGGCTGTATTAATAGCATATTGTGATGCTGCTGACAGTTGTTTTCAAGGAATTTGGAGTAACGTAAATGACCCTATCGAGAAATTAGATGTTGTTATCCATGCGACTTTAGTGTCTTCATGTTGCAACTTGTAA

Coding sequence (CDS)

ATGAAATTGTGCTTCAGTTTAGAAGTACTTGAGGCTGTATTAATAGCATATTGTGATGCTGCTGACAGTTGTTTTCAAGGAATTTGGAGTAACGTAAATGACCCTATCGAGAAATTAGATGTTGTTATCCATGCGACTTTAGTGTCTTCATGTTGCAACTTGTAA

Protein sequence

MKLCFSLEVLEAVLIAYCDAADSCFQGIWSNVNDPIEKLDVVIHATLVSSCCNL
Homology
[Close]
BLAST of CsaV3_7G012690 vs. NCBI nr
Match: KGN44016.1 (hypothetical protein Csa_7G104290 [Cucumis sativus])

HSP 1 Score: 115.2 bits (287), Expect = 7.3e-23
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0 

Query: 1  MKLCFSLEVLEAVLIAYCDAADSCFQGIWSNVNDPIEKLDVVIHATLVSSCCNL 55
          MKLCFSLEVLEAVLIAYCDAADSCFQGIWSNVNDPIEKLDVVIHATLVSSCCNL
Sbjct: 1  MKLCFSLEVLEAVLIAYCDAADSCFQGIWSNVNDPIEKLDVVIHATLVSSCCNL 54

[Close]
BLAST of CsaV3_7G012690 vs. TrEMBL
Match: tr|A0A0A0K8C2|A0A0A0K8C2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G104290 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 4.8e-23
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0 

Query: 1  MKLCFSLEVLEAVLIAYCDAADSCFQGIWSNVNDPIEKLDVVIHATLVSSCCNL 55
          MKLCFSLEVLEAVLIAYCDAADSCFQGIWSNVNDPIEKLDVVIHATLVSSCCNL
Sbjct: 1  MKLCFSLEVLEAVLIAYCDAADSCFQGIWSNVNDPIEKLDVVIHATLVSSCCNL 54

The following BLAST results are available for this feature:
BLAST of CsaV3_7G012690 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44016.17.3e-23100.00hypothetical protein Csa_7G104290 [Cucumis sativus][more]
BLAST of CsaV3_7G012690 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G012690 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G012690 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K8C2|A0A0A0K8C2_CUCSA4.8e-23100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G104290 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G012690.1CsaV3_7G012690.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G012690Melon (DHL92) v3.5.1cucmeB544