CsaV3_7G006170 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCCTCTCCTCTCTAATTATATCAAACTCCTAAATATATTCCTCCAATTTCTTAATTCAAATTATTAAATTTCCATGGCTGCACCCCATAGCCATAACTTCAACCTCCCTCCCGGATTCCGATTCTATCCTACCGATGAAGAACTAGTCGTTCATTTCCTCCACCGTAAAGCTGCCTTGTTGCCTTGCCACCCCGACGTCATTCCCGATCTCAATCTCTTCACCTACGATCCTTGGGAGTTAGACGGTATAAAATTATTTGTTTACAGTACTCCATTTCAATTCATATCCATTCGATTTTGTTATCTACTTTTTTTTAACAACTGGGACGAATCTTATAAACTATTTAAAGAATCACTACACTGTTAAGAATTTTTTAAAAAAACGTAAATGATGGCAATTAAGCAAGGTAGAAGAAAATAAGTTAGGAAATGGTTATGGAAGGGAAAAATTTGGTGGCTGATTGGTTGTGTTTTAGGGAAGGCGTTGGGAGAGGGAAACCGTTGGTATTTCTACAGCAGAAAGATTGAAGGTAGAGTTACTGATAATGGGTTTTGGAATCCGTTGGGCAGAGATGACCCCGTTCTTTCAACCGCCACCTCCGAAGTCGTCGGAATGAAGAAATATTTTCTCTTTCACCTCCAAGACGCCGATGCCGGACCTCTCAAAACTAACTGGATAATGCATGAGTTTCGTCTTGCCGATGCTGCCGCCGCCGTCGCCACCTCATCTTCCTCCTCTAGACGCCGTGGACGGCCAAAAAGAGTACGCCACCTCATCTCTCAGCTTCAAACCAATTTTCTAATAAACGTTTTTTAAAAAAACACTTCATTAATTAATATTTCTTTTACCTACTTGAAAAATGCTTCTCTTGGGGGAAAATCAAAAATGTATTTTTTTCTTCTTCCTACCAAATCAAATCTTCTATTATATATAAAAAAACAATTTAATGTTTTTTTAGTATATATAACTTTCCACATGAGGTTTTCTTTAATTTTAGTAAATAAAAAGTACTTTTGAGATGAATTCATTCAAAATCTATTAATATGATTAAAAAGAACCACTTGAGAATAGATTATTTAACATAAGTATAAATATTTACCTTTTATAAAAAAAGATTAATAAATTTTGTTTCGCAGTAGTTTTCTAAAAATTGACGTAAAGAGTTGGAAATTAGAGTAAATATTATATTATATTAACGTAAATGATAAAAAGAATTACTTTGGTAATGAGTGGTAATTATTACAGGATTATAGCAAATGGGTATTATGCAGAGTTTACGAGAGAGATGAAGAGAAGGAAGAAGAAGAAGACGGGGCAGAGCTATCGTGTTTGGATGAAGTTTTTCTAACGTTGGACGATCTTGATGAAATAAGCTTACCCAATCGCATCCAATGAATTAAATATGCCTCCCAACTCAAACACAACTCTTACCCACGTGCTCTATACCACTTATTATTATTATTATTACATCCCCTCGGCCTCCACCCAAACTCTCTCTCTATATTACCAACTCAACCCCAATCCCACTTTTT ATGGCTGCACCCCATAGCCATAACTTCAACCTCCCTCCCGGATTCCGATTCTATCCTACCGATGAAGAACTAGTCGTTCATTTCCTCCACCGTAAAGCTGCCTTGTTGCCTTGCCACCCCGACGTCATTCCCGATCTCAATCTCTTCACCTACGATCCTTGGGAGTTAGACGGGAAGGCGTTGGGAGAGGGAAACCGTTGGTATTTCTACAGCAGAAAGATTGAAGGTAGAGTTACTGATAATGGGTTTTGGAATCCGTTGGGCAGAGATGACCCCGTTCTTTCAACCGCCACCTCCGAAGTCGTCGGAATGAAGAAATATTTTCTCTTTCACCTCCAAGACGCCGATGCCGGACCTCTCAAAACTAACTGGATAATGCATGAGTTTCGTCTTGCCGATGCTGCCGCCGCCGTCGCCACCTCATCTTCCTCCTCTAGACGCCGTGGACGGCCAAAAAGAGATTATAGCAAATGGGTATTATGCAGAGTTTACGAGAGAGATGAAGAGAAGGAAGAAGAAGAAGACGGGGCAGAGCTATCGTGTTTGGATGAAGTTTTTCTAACGTTGGACGATCTTGATGAAATAAGCTTACCCAATCGCATCCAATGA ATGGCTGCACCCCATAGCCATAACTTCAACCTCCCTCCCGGATTCCGATTCTATCCTACCGATGAAGAACTAGTCGTTCATTTCCTCCACCGTAAAGCTGCCTTGTTGCCTTGCCACCCCGACGTCATTCCCGATCTCAATCTCTTCACCTACGATCCTTGGGAGTTAGACGGGAAGGCGTTGGGAGAGGGAAACCGTTGGTATTTCTACAGCAGAAAGATTGAAGGTAGAGTTACTGATAATGGGTTTTGGAATCCGTTGGGCAGAGATGACCCCGTTCTTTCAACCGCCACCTCCGAAGTCGTCGGAATGAAGAAATATTTTCTCTTTCACCTCCAAGACGCCGATGCCGGACCTCTCAAAACTAACTGGATAATGCATGAGTTTCGTCTTGCCGATGCTGCCGCCGCCGTCGCCACCTCATCTTCCTCCTCTAGACGCCGTGGACGGCCAAAAAGAGATTATAGCAAATGGGTATTATGCAGAGTTTACGAGAGAGATGAAGAGAAGGAAGAAGAAGAAGACGGGGCAGAGCTATCGTGTTTGGATGAAGTTTTTCTAACGTTGGACGATCTTGATGAAATAAGCTTACCCAATCGCATCCAATGA MAAPHSHNFNLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLNLFTYDPWELDGKALGEGNRWYFYSRKIEGRVTDNGFWNPLGRDDPVLSTATSEVVGMKKYFLFHLQDADAGPLKTNWIMHEFRLADAAAAVATSSSSSRRRGRPKRDYSKWVLCRVYERDEEKEEEEDGAELSCLDEVFLTLDDLDEISLPNRIQ
BLAST of CsaV3_7G006170 vs. NCBI nr
Match: XP_011658766.1 (PREDICTED: NAC transcription factor NAM-B2 [Cucumis sativus] >KGN43677.1 hypothetical protein Csa_7G058030 [Cucumis sativus]) HSP 1 Score: 399.8 bits (1026), Expect = 5.4e-108 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0
BLAST of CsaV3_7G006170 vs. NCBI nr
Match: XP_008455246.1 (PREDICTED: NAC domain-containing protein 104 [Cucumis melo]) HSP 1 Score: 384.4 bits (986), Expect = 2.4e-103 Identity = 197/203 (97.04%), Postives = 199/203 (98.03%), Query Frame = 0
BLAST of CsaV3_7G006170 vs. NCBI nr
Match: XP_022967625.1 (NAC domain-containing protein 104-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 347.8 bits (891), Expect = 2.5e-92 Identity = 180/207 (86.96%), Postives = 191/207 (92.27%), Query Frame = 0
BLAST of CsaV3_7G006170 vs. NCBI nr
Match: XP_022963618.1 (NAC domain-containing protein 104-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 346.7 bits (888), Expect = 5.5e-92 Identity = 180/207 (86.96%), Postives = 190/207 (91.79%), Query Frame = 0
BLAST of CsaV3_7G006170 vs. NCBI nr
Match: XP_022967624.1 (NAC domain-containing protein 104-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 340.9 bits (873), Expect = 3.0e-90 Identity = 179/208 (86.06%), Postives = 190/208 (91.35%), Query Frame = 0
BLAST of CsaV3_7G006170 vs. TAIR10
Match: AT5G64530.1 (xylem NAC domain 1) HSP 1 Score: 253.4 bits (646), Expect = 1.1e-67 Identity = 131/191 (68.59%), Postives = 160/191 (83.77%), Query Frame = 0
BLAST of CsaV3_7G006170 vs. TAIR10
Match: AT3G15510.1 (NAC domain containing protein 2) HSP 1 Score: 132.1 bits (331), Expect = 3.8e-31 Identity = 69/185 (37.30%), Postives = 101/185 (54.59%), Query Frame = 0
BLAST of CsaV3_7G006170 vs. TAIR10
Match: AT1G61110.1 (NAC domain containing protein 25) HSP 1 Score: 129.4 bits (324), Expect = 2.5e-30 Identity = 66/169 (39.05%), Postives = 93/169 (55.03%), Query Frame = 0
BLAST of CsaV3_7G006170 vs. TAIR10
Match: AT1G52880.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein) HSP 1 Score: 129.4 bits (324), Expect = 2.5e-30 Identity = 69/166 (41.57%), Postives = 92/166 (55.42%), Query Frame = 0
BLAST of CsaV3_7G006170 vs. TAIR10
Match: AT1G69490.1 (NAC-like, activated by AP3/PI) HSP 1 Score: 117.1 bits (292), Expect = 1.3e-26 Identity = 63/168 (37.50%), Postives = 94/168 (55.95%), Query Frame = 0
BLAST of CsaV3_7G006170 vs. Swiss-Prot
Match: sp|Q8GWK6|NC104_ARATH (NAC domain-containing protein 104 OS=Arabidopsis thaliana OX=3702 GN=NAC104 PE=2 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 2.1e-66 Identity = 131/191 (68.59%), Postives = 160/191 (83.77%), Query Frame = 0
BLAST of CsaV3_7G006170 vs. Swiss-Prot
Match: sp|Q9LD44|NAC56_ARATH (NAC transcription factor 56 OS=Arabidopsis thaliana OX=3702 GN=NAC056 PE=2 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 6.9e-30 Identity = 69/185 (37.30%), Postives = 101/185 (54.59%), Query Frame = 0
BLAST of CsaV3_7G006170 vs. Swiss-Prot
Match: sp|A0SPJ6|NAMB2_TRITD (NAC transcription factor NAM-B2 OS=Triticum turgidum subsp. durum OX=4567 GN=NAM-B2 PE=2 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.2e-29 Identity = 72/186 (38.71%), Postives = 98/186 (52.69%), Query Frame = 0
BLAST of CsaV3_7G006170 vs. Swiss-Prot
Match: sp|Q52QH4|NAC68_ORYSJ (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC068 PE=2 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.5e-29 Identity = 72/182 (39.56%), Postives = 101/182 (55.49%), Query Frame = 0
BLAST of CsaV3_7G006170 vs. Swiss-Prot
Match: sp|Q9ZNU2|NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=NAC018 PE=2 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 4.5e-29 Identity = 69/166 (41.57%), Postives = 92/166 (55.42%), Query Frame = 0
BLAST of CsaV3_7G006170 vs. TrEMBL
Match: tr|A0A0A0K5V4|A0A0A0K5V4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G058030 PE=4 SV=1) HSP 1 Score: 399.8 bits (1026), Expect = 3.6e-108 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0
BLAST of CsaV3_7G006170 vs. TrEMBL
Match: tr|A0A1S3C0L6|A0A1S3C0L6_CUCME (NAC domain-containing protein 104 OS=Cucumis melo OX=3656 GN=LOC103495457 PE=4 SV=1) HSP 1 Score: 384.4 bits (986), Expect = 1.6e-103 Identity = 197/203 (97.04%), Postives = 199/203 (98.03%), Query Frame = 0
BLAST of CsaV3_7G006170 vs. TrEMBL
Match: tr|A0A0B0MJ14|A0A0B0MJ14_GOSAR (NAC domain-containing 68 OS=Gossypium arboreum OX=29729 GN=F383_18518 PE=4 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 4.3e-69 Identity = 133/194 (68.56%), Postives = 162/194 (83.51%), Query Frame = 0
BLAST of CsaV3_7G006170 vs. TrEMBL
Match: tr|W6JF10|W6JF10_GOSHI (NAC domain protein NAC61 OS=Gossypium hirsutum OX=3635 GN=XND1 PE=2 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 5.6e-69 Identity = 133/194 (68.56%), Postives = 162/194 (83.51%), Query Frame = 0
BLAST of CsaV3_7G006170 vs. TrEMBL
Match: tr|A0A0D2RJJ0|A0A0D2RJJ0_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_005G217400 PE=4 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 5.6e-69 Identity = 133/194 (68.56%), Postives = 162/194 (83.51%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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