Cp4.1LG15g02500 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG15g02500
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionNAC domain-containing protein
LocationCp4.1LG15 : 2353784 .. 2355397 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTCTTCTCTTCTTCTTCCAAATTAACCTCCATGGCGGCAGCCGATCATTCCCACAACTTCAACCTCCCGCCGGGCTTCCGATTCCATCCGACCGACGAAGAACTCGTCGTCCATTTCCTCCACCGTAAGGCGGCCTTGCTCCCGTGCCACCCCGACGTCATTCCCGATCTCGATCTCTTCCCCTACGATCCGTGGGAGCTCGAAGGTAAGACCAAGTTGTTGGTGAATTGGTTTGTTTATTGGTTGCTGATTGTATGTGTTTTAGGGAAGGCGTTGGGAGAGGGAAACCGGTGGTATTTTTATAGTAGAAAGATTGATGCTCGAGTTACTGATAATGGCTATTGGAATCCATTGGGGAGAGATGATCCTGTCCTCTCTACTGCCACCTCCCAAGTTGTTGGAATGAAGAAGTATTTTCTTTTTCACGCCGCCGCCACCGCCACCGCCTCCGCCGCCGCCGATCCAATCAAAACTAATTGGATAATGCACGAGTATCGTCTTCCCGATGCTGCCTCTTCCTCTTCCTCTTCCTCGTCCTCCTCTACTAGATCGTCCAGACGCCGAGGACGGCCGAAAAGAGTACGCCACCATCCATCCCCCTTCAACCCAAGTTTTAATTTTTTTTTTCTAATATTTAATTCAACCCAACCCGTTATTTTTTTATTTTTTTTTAATAATATCAAACTACCCTTATATGGGTCCCATATCTATTGGACACTGGGTCTCGAACGGGTGAAATTTTGTGATCCCAGATCAATTGGGGAGGAGAACGAAATACCCTTCTTTAAGATCCCACGTCTCAAATAAGAAGTCCAAACATGACAATATTTGCTAACGGTTTTAAAATAATGTTTATTTCAGTAATTAAACTTATTAGCACTCTATCTTTTTTAATCGGTTTGGATTGAGTTGAATTTTGGAAGAAAAAAATATATAGTTTGGCCAATCAAAAAATAAGATTAAGAATATATAAATATTTTTTATTTAAATTTTTTTAAATTTTAGTTATTAATATAATAAATATGTTTTTTATTTTAAATAATAATAATAAAAAAAACCAGCAACGGTTGTAAACTTATTAAGGTTGTTCAATCACGAACTGAATCAAACTTCAGATTGGTCTACAAAGATTGTCCTAACCCAATTCAACCCAACTCGGGAATTAATAATTTAAAATAATTTAAAATTTTAATTTTGTTAATTATTTAATTAATTATATTTTTTTAATTAGCAGGATTACAGCAAATGGGTGTTGTGCAGAGTTTACGAAAGAGATGAAGAGAAGGAAGAAGAGGAAGAAGAAGATGGGGCTGAGCTGTCGTGTTTGGATGAAGTTTTTTTATCCTTAGAGGATCTCGACGAAATCAGCTTACCCACTCGCATCCAATAATGCGTCCCAAACACGCGCTTCCCACGTGCTCTCTTCTACTTATTATTATTACATCCCACTACCCCCATCTCTCCCTAAATTACCAACCAACCCCTCCTCTTTTATTTTTTCCCACTTCCCCCCCCCCTTTATGTCACTTTTATTAATTACTCCTAAAAAGAAATATCCTTTTCCAAAATTCTTTTTTAATTATTAGATTTTCCTTTTTTCCTTTTTTAATTA

mRNA sequence

TCTTCTTCTCTTCTTCTTCCAAATTAACCTCCATGGCGGCAGCCGATCATTCCCACAACTTCAACCTCCCGCCGGGCTTCCGATTCCATCCGACCGACGAAGAACTCGTCGTCCATTTCCTCCACCGTAAGGCGGCCTTGCTCCCGTGCCACCCCGACGTCATTCCCGATCTCGATCTCTTCCCCTACGATCCGTGGGAGCTCGAAGGGAAGGCGTTGGGAGAGGGAAACCGGTGGTATTTTTATAGTAGAAAGATTGATGCTCGAGTTACTGATAATGGCTATTGGAATCCATTGGGGAGAGATGATCCTGTCCTCTCTACTGCCACCTCCCAAGTTGTTGGAATGAAGAAGTATTTTCTTTTTCACGCCGCCGCCACCGCCACCGCCTCCGCCGCCGCCGATCCAATCAAAACTAATTGGATAATGCACGAGTATCGTCTTCCCGATGCTGCCTCTTCCTCTTCCTCTTCCTCGTCCTCCTCTACTAGATCGTCCAGACGCCGAGGACGGCCGAAAAGAGATTACAGCAAATGGGTGTTGTGCAGAGTTTACGAAAGAGATGAAGAGAAGGAAGAAGAGGAAGAAGAAGATGGGGCTGAGCTGTCGTGTTTGGATGAAGTTTTTTTATCCTTAGAGGATCTCGACGAAATCAGCTTACCCACTCGCATCCAATAATGCGTCCCAAACACGCGCTTCCCACGTGCTCTCTTCTACTTATTATTATTACATCCCACTACCCCCATCTCTCCCTAAATTACCAACCAACCCCTCCTCTTTTATTTTTTCCCACTTCCCCCCCCCCTTTATGTCACTTTTATTAATTACTCCTAAAAAGAAATATCCTTTTCCAAAATTCTTTTTTAATTATTAGATTTTCCTTTTTTCCTTTTTTAATTA

Coding sequence (CDS)

ATGGCGGCAGCCGATCATTCCCACAACTTCAACCTCCCGCCGGGCTTCCGATTCCATCCGACCGACGAAGAACTCGTCGTCCATTTCCTCCACCGTAAGGCGGCCTTGCTCCCGTGCCACCCCGACGTCATTCCCGATCTCGATCTCTTCCCCTACGATCCGTGGGAGCTCGAAGGGAAGGCGTTGGGAGAGGGAAACCGGTGGTATTTTTATAGTAGAAAGATTGATGCTCGAGTTACTGATAATGGCTATTGGAATCCATTGGGGAGAGATGATCCTGTCCTCTCTACTGCCACCTCCCAAGTTGTTGGAATGAAGAAGTATTTTCTTTTTCACGCCGCCGCCACCGCCACCGCCTCCGCCGCCGCCGATCCAATCAAAACTAATTGGATAATGCACGAGTATCGTCTTCCCGATGCTGCCTCTTCCTCTTCCTCTTCCTCGTCCTCCTCTACTAGATCGTCCAGACGCCGAGGACGGCCGAAAAGAGATTACAGCAAATGGGTGTTGTGCAGAGTTTACGAAAGAGATGAAGAGAAGGAAGAAGAGGAAGAAGAAGATGGGGCTGAGCTGTCGTGTTTGGATGAAGTTTTTTTATCCTTAGAGGATCTCGACGAAATCAGCTTACCCACTCGCATCCAATAA

Protein sequence

MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATASAAADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEKEEEEEEDGAELSCLDEVFLSLEDLDEISLPTRIQ
BLAST of Cp4.1LG15g02500 vs. Swiss-Prot
Match: NC104_ARATH (NAC domain-containing protein 104 OS=Arabidopsis thaliana GN=NAC104 PE=2 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 6.0e-69
Identity = 128/200 (64.00%), Postives = 154/200 (77.00%), Query Frame = 1

Query: 11  NLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGEGNRWYF 70
           NLPPGFRF PTDEELVVHFLHRKA+LLPCHPDVIPDLDL+ YDPW+L GKALGEG +WYF
Sbjct: 2   NLPPGFRFFPTDEELVVHFLHRKASLLPCHPDVIPDLDLYHYDPWDLPGKALGEGRQWYF 61

Query: 71  YSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATASAAADPIKTNW 130
           YSRK   RVT NGYW  +G D+P+ +++T + VG+KKY  F+   +          +TNW
Sbjct: 62  YSRKTQERVTSNGYWGSMGMDEPIYTSSTHKKVGIKKYLTFYLGDS----------QTNW 121

Query: 131 IMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEKEEEEEEDGAE 190
           IM EY LPD++SSSS SS  S+R+S    +P  DYSKWV+CRVYE  +   EEE++DG E
Sbjct: 122 IMQEYSLPDSSSSSSRSSKRSSRASSSSHKP--DYSKWVICRVYE--QNCSEEEDDDGTE 181

Query: 191 LSCLDEVFLSLEDLDEISLP 211
           LSCLDEVFLSL+DLDE+SLP
Sbjct: 182 LSCLDEVFLSLDDLDEVSLP 187

BLAST of Cp4.1LG15g02500 vs. Swiss-Prot
Match: NAMB1_HORVS (NAC transcription factor NAM-B1 OS=Hordeum vulgare subsp. spontaneum GN=NAM-B1 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 8.5e-31
Identity = 77/197 (39.09%), Postives = 108/197 (54.82%), Query Frame = 1

Query: 12  LPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGEGNRWYFY 71
           LPPGFRFHPTDEELVVH+L +KAA  P    +I ++DL+ +DPWEL  KA    + WYF+
Sbjct: 35  LPPGFRFHPTDEELVVHYLKKKAAKAPLPVTIIAEVDLYKFDPWELPEKATFGEHEWYFF 94

Query: 72  S---RKI-----DARVTDNGYWNPLGRDDPVLSTATS---QVVGMKKYFLFHAAATATAS 131
           S   RK        R   +GYW   G D P+L++AT    + VG+KK  +F+        
Sbjct: 95  SPRDRKYPNGARPNRAATSGYWKATGTDKPILASATGCGREKVGVKKALVFYRGKPPRG- 154

Query: 132 AAADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEK 191
                +KTNWIMHEYRL  A++ S+++S     +   R         WVLCR+Y++  + 
Sbjct: 155 -----LKTNWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIYKKTSKA 214

Query: 192 EEEEEEDGAELSCLDEV 198
                ++   + C D V
Sbjct: 215 AAAVGDEQRSMECEDSV 225

BLAST of Cp4.1LG15g02500 vs. Swiss-Prot
Match: NAM1_HORVD (NAC transcription factor NAM-1 OS=Hordeum vulgare var. distichum GN=NAM-1 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 8.5e-31
Identity = 77/197 (39.09%), Postives = 108/197 (54.82%), Query Frame = 1

Query: 12  LPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGEGNRWYFY 71
           LPPGFRFHPTDEELVVH+L +KAA  P    +I ++DL+ +DPWEL  KA    + WYF+
Sbjct: 35  LPPGFRFHPTDEELVVHYLKKKAAKAPLPVTIIAEVDLYKFDPWELPEKATFGEHEWYFF 94

Query: 72  S---RKI-----DARVTDNGYWNPLGRDDPVLSTATS---QVVGMKKYFLFHAAATATAS 131
           S   RK        R   +GYW   G D P+L++AT    + VG+KK  +F+        
Sbjct: 95  SPRDRKYANGARPNRAATSGYWKATGTDKPILASATGCGREKVGVKKALVFYRGKPPRG- 154

Query: 132 AAADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEK 191
                +KTNWIMHEYRL  A++ S+++S     +   R         WVLCR+Y++  + 
Sbjct: 155 -----LKTNWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIYKKTSKA 214

Query: 192 EEEEEEDGAELSCLDEV 198
                ++   + C D V
Sbjct: 215 AAAVGDEQRSMECEDSV 225

BLAST of Cp4.1LG15g02500 vs. Swiss-Prot
Match: NAMB2_TRITD (NAC transcription factor NAM-B2 OS=Triticum turgidum subsp. durum GN=NAM-B2 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.2e-30
Identity = 79/195 (40.51%), Postives = 109/195 (55.90%), Query Frame = 1

Query: 12  LPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGEGNRWYFY 71
           LPPGFRFHPTDEELVVH+L +KAA +P    +I ++DL+ +DPWEL  KA      WYF+
Sbjct: 28  LPPGFRFHPTDEELVVHYLKKKAAKVPLPVTIITEVDLYKFDPWELPEKATFGEQEWYFF 87

Query: 72  S---RKI-----DARVTDNGYWNPLGRDDPVLSTATS-QVVGMKKYFLFHAAATATASAA 131
           S   RK        R   +GYW   G D P+L++    + VG+KK  +F+          
Sbjct: 88  SPRDRKYPNGARPNRAATSGYWKATGTDKPILASGCGREKVGVKKALVFYRGKPPKG--- 147

Query: 132 ADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEKEE 191
              +KTNWIMHEYRL DA+SS+++S         R    + D   WVLCR+Y++  +   
Sbjct: 148 ---LKTNWIMHEYRLTDASSSATTSRPPPVTGGSRSASLRLD--DWVLCRIYKKINKAAA 207

Query: 192 EEEEDGAELSCLDEV 198
            +++   E  C D V
Sbjct: 208 GDQQRSME--CEDSV 212

BLAST of Cp4.1LG15g02500 vs. Swiss-Prot
Match: NAC68_ORYSJ (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.2e-29
Identity = 79/198 (39.90%), Postives = 107/198 (54.04%), Query Frame = 1

Query: 5   DHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGE 64
           D     NLPPGFRFHPTDEELVVH+L RK A  P    +I ++DL+  DPW+L  KAL  
Sbjct: 14  DAEAELNLPPGFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALFG 73

Query: 65  GNRWYFYS---RKI-----DARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAAT 124
              WYF++   RK        R    GYW   G D PV    +++ VG+KK  +F+    
Sbjct: 74  RKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFY---- 133

Query: 125 ATASAAADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYER 184
             +  A   +KT+WIMHEYRL DA  +             ++G  K D  +WVLCR+Y +
Sbjct: 134 --SGKAPRGVKTDWIMHEYRLADADRAPGG----------KKGSQKLD--EWVLCRLYNK 193

Query: 185 DE--EKEEEEEEDGAELS 193
               EK + E++D A ++
Sbjct: 194 KNNWEKVKLEQQDVASVA 193

BLAST of Cp4.1LG15g02500 vs. TrEMBL
Match: A0A0A0K5V4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G058030 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 2.0e-95
Identity = 176/212 (83.02%), Postives = 190/212 (89.62%), Query Frame = 1

Query: 3   AADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKAL 62
           AA HSHNFNLPPGFRF+PTDEELVVHFLHRKAALLPCHPDVIPDL+LF YDPWEL+GKAL
Sbjct: 2   AAPHSHNFNLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLNLFTYDPWELDGKAL 61

Query: 63  GEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATASAA 122
           GEGNRWYFYSRKI+ RVTDNG+WNPLGRDDPVLSTATS+VVGMKKYFLFH        A 
Sbjct: 62  GEGNRWYFYSRKIEGRVTDNGFWNPLGRDDPVLSTATSEVVGMKKYFLFH-----LQDAD 121

Query: 123 ADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEKEE 182
           A P+KTNWIMHE+RL DAA++ ++SSS    SSRRRGRPKRDYSKWVLCRVYERDEEK  
Sbjct: 122 AGPLKTNWIMHEFRLADAAAAVATSSS----SSRRRGRPKRDYSKWVLCRVYERDEEK-- 181

Query: 183 EEEEDGAELSCLDEVFLSLEDLDEISLPTRIQ 215
           EEEEDGAELSCLDEVFL+L+DLDEISLP RIQ
Sbjct: 182 EEEEDGAELSCLDEVFLTLDDLDEISLPNRIQ 202

BLAST of Cp4.1LG15g02500 vs. TrEMBL
Match: A0A060A5Q2_BOENI (NAC domain-containing protein OS=Boehmeria nivea GN=NAC25 PE=2 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.6e-73
Identity = 143/210 (68.10%), Postives = 164/210 (78.10%), Query Frame = 1

Query: 5   DHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGE 64
           DH  N NLPPGFRF+PTDEELVVHFLHRK ALLPCHPDVIPDLDL+PYDPW+L GKALGE
Sbjct: 3   DHK-NVNLPPGFRFYPTDEELVVHFLHRKVALLPCHPDVIPDLDLYPYDPWDLHGKALGE 62

Query: 65  GNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATASAAAD 124
            N+WYFYSRK   RVT NGYW PLG ++ V+     + VG KKY +FH      A  A+ 
Sbjct: 63  DNKWYFYSRKTQNRVTSNGYWKPLGVEEAVIGRCGGKKVGTKKYLVFH------AGDASS 122

Query: 125 PIKTNWIMHEYRLPDAAS-SSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEKEEE 184
            IKTNWIMHE+ L D+AS SS+SSSS+STR+S+RR   K D SKWVLCRVYERD      
Sbjct: 123 SIKTNWIMHEFHLSDSASASSTSSSSNSTRTSKRRTTNKLDCSKWVLCRVYERD------ 182

Query: 185 EEEDGAELSCLDEVFLSLEDLDEISLPTRI 214
           +++DGAELSCLDEVFLSL+DLDEISLP R+
Sbjct: 183 DDDDGAELSCLDEVFLSLDDLDEISLPNRV 199

BLAST of Cp4.1LG15g02500 vs. TrEMBL
Match: A0A0B0MJ14_GOSAR (NAC domain-containing 68 OS=Gossypium arboreum GN=F383_18518 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 5.8e-71
Identity = 138/204 (67.65%), Postives = 159/204 (77.94%), Query Frame = 1

Query: 7   SHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGEGN 66
           + N NLPPGFRF+PTDEELVVHFL RKAALLPCHPDVIPDLDL+PYDPWEL+GKALGEGN
Sbjct: 4   NRNVNLPPGFRFYPTDEELVVHFLQRKAALLPCHPDVIPDLDLYPYDPWELDGKALGEGN 63

Query: 67  RWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATASAAADPI 126
           +WY+YSR+   R T  GYW P+G D+PV+++ +S+ VGMKKYF+F+   +  A      I
Sbjct: 64  QWYYYSRRTQNRNTSKGYWKPMGIDEPVVNSNSSKKVGMKKYFVFYIGESGPAG-----I 123

Query: 127 KTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEKEEEEEE 186
           KTNWIM EYRL D     S SSSSS  S RR G  K DYSKWV+CRVYER+     EEE+
Sbjct: 124 KTNWIMQEYRLSD-----SDSSSSSRSSKRRGGHSKIDYSKWVVCRVYERN---CSEEED 183

Query: 187 DGAELSCLDEVFLSLEDLDEISLP 211
           DG ELSCLDEVFLSL+DLDEISLP
Sbjct: 184 DGTELSCLDEVFLSLDDLDEISLP 194

BLAST of Cp4.1LG15g02500 vs. TrEMBL
Match: W9RXQ8_9ROSA (NAC domain-containing protein 68 OS=Morus notabilis GN=L484_024182 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 7.6e-71
Identity = 136/202 (67.33%), Postives = 160/202 (79.21%), Query Frame = 1

Query: 9   NFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGEGNRW 68
           N NLPPGFRF+PTDEELVVHFLHRK +LLPCHPDVIPDLDL+PYDPWEL+GKALGE N+W
Sbjct: 5   NVNLPPGFRFYPTDEELVVHFLHRKVSLLPCHPDVIPDLDLYPYDPWELDGKALGEDNKW 64

Query: 69  YFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATASAAADPIKT 128
           YFYSRK   RVT+NGYW PLG ++ V+  + ++ VG KKY +F+         A   +KT
Sbjct: 65  YFYSRKTQNRVTNNGYWKPLGVEEAVIGRSGNKKVGTKKYLVFY------VGEAPSGMKT 124

Query: 129 NWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEKEEEEEEDG 188
           NWIMHE+ L D+A S+SS++SSSTRSS+RR   K D SKWVLCRVYERD     E+ +DG
Sbjct: 125 NWIMHEFHLSDSA-STSSTTSSSTRSSKRRAPKKIDTSKWVLCRVYERD-----EDHDDG 184

Query: 189 AELSCLDEVFLSLEDLDEISLP 211
            ELSCLDEVFLSL+DLDEISLP
Sbjct: 185 TELSCLDEVFLSLDDLDEISLP 194

BLAST of Cp4.1LG15g02500 vs. TrEMBL
Match: A0A0D2RJJ0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G217400 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 7.6e-71
Identity = 137/204 (67.16%), Postives = 159/204 (77.94%), Query Frame = 1

Query: 7   SHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGEGN 66
           + N NLPPGFRF+PTDEELVVHFL RKAALLPCHPDVIPDLDL+PYDPWEL+GKALGEGN
Sbjct: 4   NRNVNLPPGFRFYPTDEELVVHFLQRKAALLPCHPDVIPDLDLYPYDPWELDGKALGEGN 63

Query: 67  RWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATASAAADPI 126
           +WY+YSR+   R T  GYW P+G D+PV+++ +S+ VGMKKYF+F+   +  A      +
Sbjct: 64  QWYYYSRRTQNRNTSKGYWKPMGIDEPVVNSNSSKKVGMKKYFVFYIGESGPAG-----V 123

Query: 127 KTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEKEEEEEE 186
           KTNWIM EYRL D     S SSSSS  S RR G  K DYSKWV+CRVYER+     EEE+
Sbjct: 124 KTNWIMQEYRLSD-----SDSSSSSRSSKRRGGHSKIDYSKWVVCRVYERN---CSEEED 183

Query: 187 DGAELSCLDEVFLSLEDLDEISLP 211
           DG ELSCLDEVFLSL+DLDEISLP
Sbjct: 184 DGTELSCLDEVFLSLDDLDEISLP 194

BLAST of Cp4.1LG15g02500 vs. TAIR10
Match: AT5G64530.1 (AT5G64530.1 xylem NAC domain 1)

HSP 1 Score: 261.9 bits (668), Expect = 3.4e-70
Identity = 128/200 (64.00%), Postives = 154/200 (77.00%), Query Frame = 1

Query: 11  NLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGEGNRWYF 70
           NLPPGFRF PTDEELVVHFLHRKA+LLPCHPDVIPDLDL+ YDPW+L GKALGEG +WYF
Sbjct: 2   NLPPGFRFFPTDEELVVHFLHRKASLLPCHPDVIPDLDLYHYDPWDLPGKALGEGRQWYF 61

Query: 71  YSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATASAAADPIKTNW 130
           YSRK   RVT NGYW  +G D+P+ +++T + VG+KKY  F+   +          +TNW
Sbjct: 62  YSRKTQERVTSNGYWGSMGMDEPIYTSSTHKKVGIKKYLTFYLGDS----------QTNW 121

Query: 131 IMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEKEEEEEEDGAE 190
           IM EY LPD++SSSS SS  S+R+S    +P  DYSKWV+CRVYE  +   EEE++DG E
Sbjct: 122 IMQEYSLPDSSSSSSRSSKRSSRASSSSHKP--DYSKWVICRVYE--QNCSEEEDDDGTE 181

Query: 191 LSCLDEVFLSLEDLDEISLP 211
           LSCLDEVFLSL+DLDE+SLP
Sbjct: 182 LSCLDEVFLSLDDLDEVSLP 187

BLAST of Cp4.1LG15g02500 vs. TAIR10
Match: AT1G52880.1 (AT1G52880.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 130.2 bits (326), Expect = 1.5e-30
Identity = 73/177 (41.24%), Postives = 97/177 (54.80%), Query Frame = 1

Query: 11  NLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGEGNRWYF 70
           NLPPGFRFHPTDEELV+H+L RKA  +P    +I D+DL+ +DPWEL  KA      WYF
Sbjct: 16  NLPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELPAKASFGEQEWYF 75

Query: 71  YS---RKI-----DARVTDNGYWNPLGRDDPVLST--ATSQVVGMKKYFLFHAAATATAS 130
           +S   RK        R   +GYW   G D PV+ST    S+ VG+KK  +F++       
Sbjct: 76  FSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKG- 135

Query: 131 AAADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERD 178
                +K++WIMHEYRL D   +      +   S R           WVLCR+Y+++
Sbjct: 136 -----VKSDWIMHEYRLTDNKPTHICDFGNKKNSLR--------LDDWVLCRIYKKN 178

BLAST of Cp4.1LG15g02500 vs. TAIR10
Match: AT1G61110.1 (AT1G61110.1 NAC domain containing protein 25)

HSP 1 Score: 127.9 bits (320), Expect = 7.6e-30
Identity = 74/183 (40.44%), Postives = 100/183 (54.64%), Query Frame = 1

Query: 11  NLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGEGNRWYF 70
           +LPPGFRFHPTDEELVVH+L +KA  +P    +I ++DL+ +DPWEL  KA    + WYF
Sbjct: 15  HLPPGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLYKFDPWELPSKASFGEHEWYF 74

Query: 71  YS---RKIDARVTDN-----GYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATASAA 130
           +S   RK    V  N     GYW   G D P+  T  S  VG+KK  +F+          
Sbjct: 75  FSPRDRKYPNGVRPNRAATSGYWKATGTDKPIF-TCNSHKVGVKKALVFYGGKPPKG--- 134

Query: 131 ADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEKEE 186
              IKT+WIMHEYRL D   S+++     T + +   R       WVLCR+Y+++  +  
Sbjct: 135 ---IKTDWIMHEYRLTDGNLSTAAKPPDLTTTRKNSLR----LDDWVLCRIYKKNSSQRP 186

BLAST of Cp4.1LG15g02500 vs. TAIR10
Match: AT3G15510.1 (AT3G15510.1 NAC domain containing protein 2)

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-28
Identity = 73/196 (37.24%), Postives = 107/196 (54.59%), Query Frame = 1

Query: 11  NLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGEGNRWYF 70
           NLPPGFRFHPTDEELVVH+L RKAA  P    +I ++DL+ +DPWEL  KA      WYF
Sbjct: 16  NLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVDLYKFDPWELPAKASFGEQEWYF 75

Query: 71  YS---RKI-----DARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATASAA 130
           +S   RK        R   +GYW   G D PVL++  +Q VG+KK  +F++         
Sbjct: 76  FSPRDRKYPNGARPNRAATSGYWKATGTDKPVLASDGNQKVGVKKALVFYSGKPPKG--- 135

Query: 131 ADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEKEE 190
              +K++WIMHEYRL     +  ++         ++   + D   WVLCR+Y+++     
Sbjct: 136 ---VKSDWIMHEYRL---IENKPNNRPPGCDFGNKKNSLRLD--DWVLCRIYKKNNASRH 195

Query: 191 EEEEDGAELSCLDEVF 199
            + +   ++  +D +F
Sbjct: 196 VDNDKDHDM--IDYIF 198

BLAST of Cp4.1LG15g02500 vs. TAIR10
Match: AT1G01720.1 (AT1G01720.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-28
Identity = 74/178 (41.57%), Postives = 91/178 (51.12%), Query Frame = 1

Query: 7   SHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGEGN 66
           S    LPPGFRFHPTDEELV+H+L RK A       +I ++DL+ YDPWEL G AL    
Sbjct: 2   SELLQLPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEK 61

Query: 67  RWYFYS---RKI-----DARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATAT 126
            WYF+S   RK        R   +GYW   G D P+      + VG+KK  +F+A     
Sbjct: 62  EWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPI---GLPKPVGIKKALVFYAGKAPK 121

Query: 127 ASAAADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYER 177
                   KTNWIMHEYRL D             RS R++    R    WVLCR+Y +
Sbjct: 122 GE------KTNWIMHEYRLADV-----------DRSVRKKKNSLR-LDDWVLCRIYNK 158

BLAST of Cp4.1LG15g02500 vs. NCBI nr
Match: gi|778724251|ref|XP_011658766.1| (PREDICTED: NAC transcription factor NAM-B2 [Cucumis sativus])

HSP 1 Score: 356.7 bits (914), Expect = 2.9e-95
Identity = 176/212 (83.02%), Postives = 190/212 (89.62%), Query Frame = 1

Query: 3   AADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKAL 62
           AA HSHNFNLPPGFRF+PTDEELVVHFLHRKAALLPCHPDVIPDL+LF YDPWEL+GKAL
Sbjct: 2   AAPHSHNFNLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLNLFTYDPWELDGKAL 61

Query: 63  GEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATASAA 122
           GEGNRWYFYSRKI+ RVTDNG+WNPLGRDDPVLSTATS+VVGMKKYFLFH        A 
Sbjct: 62  GEGNRWYFYSRKIEGRVTDNGFWNPLGRDDPVLSTATSEVVGMKKYFLFH-----LQDAD 121

Query: 123 ADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEKEE 182
           A P+KTNWIMHE+RL DAA++ ++SSS    SSRRRGRPKRDYSKWVLCRVYERDEEK  
Sbjct: 122 AGPLKTNWIMHEFRLADAAAAVATSSS----SSRRRGRPKRDYSKWVLCRVYERDEEK-- 181

Query: 183 EEEEDGAELSCLDEVFLSLEDLDEISLPTRIQ 215
           EEEEDGAELSCLDEVFL+L+DLDEISLP RIQ
Sbjct: 182 EEEEDGAELSCLDEVFLTLDDLDEISLPNRIQ 202

BLAST of Cp4.1LG15g02500 vs. NCBI nr
Match: gi|659110479|ref|XP_008455246.1| (PREDICTED: NAC domain-containing protein 68 [Cucumis melo])

HSP 1 Score: 352.1 bits (902), Expect = 7.1e-94
Identity = 174/212 (82.08%), Postives = 188/212 (88.68%), Query Frame = 1

Query: 3   AADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKAL 62
           AA  SHNFNLPPGFRF+PTDEELVVHFLHRKAALLPCHPDVIPDL LF YDPWEL+GKAL
Sbjct: 2   AAPDSHNFNLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLSLFTYDPWELDGKAL 61

Query: 63  GEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATASAA 122
           GEGNRWYFYSRKI+ RVTDNG+WNPLGRDDPVLSTATS+VVGMKKYFLFH        A 
Sbjct: 62  GEGNRWYFYSRKIEGRVTDNGFWNPLGRDDPVLSTATSEVVGMKKYFLFH-----LQDAD 121

Query: 123 ADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEKEE 182
           A P+KTNWIMHE+RL DAA++SSSS      SSRRRGRPKRDYSKWVLCRVYERDE+ ++
Sbjct: 122 AGPLKTNWIMHEFRLADAAAASSSS------SSRRRGRPKRDYSKWVLCRVYERDED-QK 181

Query: 183 EEEEDGAELSCLDEVFLSLEDLDEISLPTRIQ 215
           EEEEDGAELSCLDEVFL+L+DLDEISLP RIQ
Sbjct: 182 EEEEDGAELSCLDEVFLTLDDLDEISLPNRIQ 201

BLAST of Cp4.1LG15g02500 vs. NCBI nr
Match: gi|640938595|gb|AIA57529.1| (NAC domain-containing protein [Boehmeria nivea])

HSP 1 Score: 283.9 bits (725), Expect = 2.4e-73
Identity = 143/210 (68.10%), Postives = 164/210 (78.10%), Query Frame = 1

Query: 5   DHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGE 64
           DH  N NLPPGFRF+PTDEELVVHFLHRK ALLPCHPDVIPDLDL+PYDPW+L GKALGE
Sbjct: 3   DHK-NVNLPPGFRFYPTDEELVVHFLHRKVALLPCHPDVIPDLDLYPYDPWDLHGKALGE 62

Query: 65  GNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATASAAAD 124
            N+WYFYSRK   RVT NGYW PLG ++ V+     + VG KKY +FH      A  A+ 
Sbjct: 63  DNKWYFYSRKTQNRVTSNGYWKPLGVEEAVIGRCGGKKVGTKKYLVFH------AGDASS 122

Query: 125 PIKTNWIMHEYRLPDAAS-SSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEKEEE 184
            IKTNWIMHE+ L D+AS SS+SSSS+STR+S+RR   K D SKWVLCRVYERD      
Sbjct: 123 SIKTNWIMHEFHLSDSASASSTSSSSNSTRTSKRRTTNKLDCSKWVLCRVYERD------ 182

Query: 185 EEEDGAELSCLDEVFLSLEDLDEISLPTRI 214
           +++DGAELSCLDEVFLSL+DLDEISLP R+
Sbjct: 183 DDDDGAELSCLDEVFLSLDDLDEISLPNRV 199

BLAST of Cp4.1LG15g02500 vs. NCBI nr
Match: gi|728811644|gb|KHG00342.1| (NAC domain-containing 68 [Gossypium arboreum])

HSP 1 Score: 275.4 bits (703), Expect = 8.4e-71
Identity = 138/204 (67.65%), Postives = 159/204 (77.94%), Query Frame = 1

Query: 7   SHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGEGN 66
           + N NLPPGFRF+PTDEELVVHFL RKAALLPCHPDVIPDLDL+PYDPWEL+GKALGEGN
Sbjct: 4   NRNVNLPPGFRFYPTDEELVVHFLQRKAALLPCHPDVIPDLDLYPYDPWELDGKALGEGN 63

Query: 67  RWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATASAAADPI 126
           +WY+YSR+   R T  GYW P+G D+PV+++ +S+ VGMKKYF+F+   +  A      I
Sbjct: 64  QWYYYSRRTQNRNTSKGYWKPMGIDEPVVNSNSSKKVGMKKYFVFYIGESGPAG-----I 123

Query: 127 KTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEKEEEEEE 186
           KTNWIM EYRL D     S SSSSS  S RR G  K DYSKWV+CRVYER+     EEE+
Sbjct: 124 KTNWIMQEYRLSD-----SDSSSSSRSSKRRGGHSKIDYSKWVVCRVYERN---CSEEED 183

Query: 187 DGAELSCLDEVFLSLEDLDEISLP 211
           DG ELSCLDEVFLSL+DLDEISLP
Sbjct: 184 DGTELSCLDEVFLSLDDLDEISLP 194

BLAST of Cp4.1LG15g02500 vs. NCBI nr
Match: gi|823160215|ref|XP_012479949.1| (PREDICTED: NAC transcription factor NAM-B2-like [Gossypium raimondii])

HSP 1 Score: 275.0 bits (702), Expect = 1.1e-70
Identity = 137/204 (67.16%), Postives = 159/204 (77.94%), Query Frame = 1

Query: 7   SHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGEGN 66
           + N NLPPGFRF+PTDEELVVHFL RKAALLPCHPDVIPDLDL+PYDPWEL+GKALGEGN
Sbjct: 4   NRNVNLPPGFRFYPTDEELVVHFLQRKAALLPCHPDVIPDLDLYPYDPWELDGKALGEGN 63

Query: 67  RWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATASAAADPI 126
           +WY+YSR+   R T  GYW P+G D+PV+++ +S+ VGMKKYF+F+   +  A      +
Sbjct: 64  QWYYYSRRTQNRNTSKGYWKPMGIDEPVVNSNSSKKVGMKKYFVFYIGESGPAG-----V 123

Query: 127 KTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEKEEEEEE 186
           KTNWIM EYRL D     S SSSSS  S RR G  K DYSKWV+CRVYER+     EEE+
Sbjct: 124 KTNWIMQEYRLSD-----SDSSSSSRSSKRRGGHSKIDYSKWVVCRVYERN---CSEEED 183

Query: 187 DGAELSCLDEVFLSLEDLDEISLP 211
           DG ELSCLDEVFLSL+DLDEISLP
Sbjct: 184 DGTELSCLDEVFLSLDDLDEISLP 194

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
NC104_ARATH6.0e-6964.00NAC domain-containing protein 104 OS=Arabidopsis thaliana GN=NAC104 PE=2 SV=1[more]
NAMB1_HORVS8.5e-3139.09NAC transcription factor NAM-B1 OS=Hordeum vulgare subsp. spontaneum GN=NAM-B1 P... [more]
NAM1_HORVD8.5e-3139.09NAC transcription factor NAM-1 OS=Hordeum vulgare var. distichum GN=NAM-1 PE=3 S... [more]
NAMB2_TRITD3.2e-3040.51NAC transcription factor NAM-B2 OS=Triticum turgidum subsp. durum GN=NAM-B2 PE=2... [more]
NAC68_ORYSJ1.2e-2939.90NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 S... [more]
Match NameE-valueIdentityDescription
A0A0A0K5V4_CUCSA2.0e-9583.02Uncharacterized protein OS=Cucumis sativus GN=Csa_7G058030 PE=4 SV=1[more]
A0A060A5Q2_BOENI1.6e-7368.10NAC domain-containing protein OS=Boehmeria nivea GN=NAC25 PE=2 SV=1[more]
A0A0B0MJ14_GOSAR5.8e-7167.65NAC domain-containing 68 OS=Gossypium arboreum GN=F383_18518 PE=4 SV=1[more]
W9RXQ8_9ROSA7.6e-7167.33NAC domain-containing protein 68 OS=Morus notabilis GN=L484_024182 PE=4 SV=1[more]
A0A0D2RJJ0_GOSRA7.6e-7167.16Uncharacterized protein OS=Gossypium raimondii GN=B456_005G217400 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G64530.13.4e-7064.00 xylem NAC domain 1[more]
AT1G52880.11.5e-3041.24 NAC (No Apical Meristem) domain transcriptional regulator superfamil... [more]
AT1G61110.17.6e-3040.44 NAC domain containing protein 25[more]
AT3G15510.11.1e-2837.24 NAC domain containing protein 2[more]
AT1G01720.11.1e-2841.57 NAC (No Apical Meristem) domain transcriptional regulator superfamil... [more]
Match NameE-valueIdentityDescription
gi|778724251|ref|XP_011658766.1|2.9e-9583.02PREDICTED: NAC transcription factor NAM-B2 [Cucumis sativus][more]
gi|659110479|ref|XP_008455246.1|7.1e-9482.08PREDICTED: NAC domain-containing protein 68 [Cucumis melo][more]
gi|640938595|gb|AIA57529.1|2.4e-7368.10NAC domain-containing protein [Boehmeria nivea][more]
gi|728811644|gb|KHG00342.1|8.4e-7167.65NAC domain-containing 68 [Gossypium arboreum][more]
gi|823160215|ref|XP_012479949.1|1.1e-7067.16PREDICTED: NAC transcription factor NAM-B2-like [Gossypium raimondii][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR003441NAC-dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0043067 regulation of programmed cell death
biological_process GO:0048367 shoot system development
biological_process GO:0010089 xylem development
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g02500.1Cp4.1LG15g02500.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003441NAC domainPFAMPF02365NAMcoord: 13..137
score: 2.8
IPR003441NAC domainPROFILEPS51005NACcoord: 12..176
score: 43
IPR003441NAC domainunknownSSF101941NAC domaincoord: 9..175
score: 6.02
NoneNo IPR availablePANTHERPTHR31719FAMILY NOT NAMEDcoord: 9..214
score: 6.1
NoneNo IPR availablePANTHERPTHR31719:SF6NAC (NO APICAL MERISTEM) DOMAIN TRANSCRIPTIONAL REGULATOR SUPERFAMILY PROTEINcoord: 9..214
score: 6.1