Cp4.1LG15g02500 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTTCTTCTCTTCTTCTTCCAAATTAACCTCCATGGCGGCAGCCGATCATTCCCACAACTTCAACCTCCCGCCGGGCTTCCGATTCCATCCGACCGACGAAGAACTCGTCGTCCATTTCCTCCACCGTAAGGCGGCCTTGCTCCCGTGCCACCCCGACGTCATTCCCGATCTCGATCTCTTCCCCTACGATCCGTGGGAGCTCGAAGGTAAGACCAAGTTGTTGGTGAATTGGTTTGTTTATTGGTTGCTGATTGTATGTGTTTTAGGGAAGGCGTTGGGAGAGGGAAACCGGTGGTATTTTTATAGTAGAAAGATTGATGCTCGAGTTACTGATAATGGCTATTGGAATCCATTGGGGAGAGATGATCCTGTCCTCTCTACTGCCACCTCCCAAGTTGTTGGAATGAAGAAGTATTTTCTTTTTCACGCCGCCGCCACCGCCACCGCCTCCGCCGCCGCCGATCCAATCAAAACTAATTGGATAATGCACGAGTATCGTCTTCCCGATGCTGCCTCTTCCTCTTCCTCTTCCTCGTCCTCCTCTACTAGATCGTCCAGACGCCGAGGACGGCCGAAAAGAGTACGCCACCATCCATCCCCCTTCAACCCAAGTTTTAATTTTTTTTTTCTAATATTTAATTCAACCCAACCCGTTATTTTTTTATTTTTTTTTAATAATATCAAACTACCCTTATATGGGTCCCATATCTATTGGACACTGGGTCTCGAACGGGTGAAATTTTGTGATCCCAGATCAATTGGGGAGGAGAACGAAATACCCTTCTTTAAGATCCCACGTCTCAAATAAGAAGTCCAAACATGACAATATTTGCTAACGGTTTTAAAATAATGTTTATTTCAGTAATTAAACTTATTAGCACTCTATCTTTTTTAATCGGTTTGGATTGAGTTGAATTTTGGAAGAAAAAAATATATAGTTTGGCCAATCAAAAAATAAGATTAAGAATATATAAATATTTTTTATTTAAATTTTTTTAAATTTTAGTTATTAATATAATAAATATGTTTTTTATTTTAAATAATAATAATAAAAAAAACCAGCAACGGTTGTAAACTTATTAAGGTTGTTCAATCACGAACTGAATCAAACTTCAGATTGGTCTACAAAGATTGTCCTAACCCAATTCAACCCAACTCGGGAATTAATAATTTAAAATAATTTAAAATTTTAATTTTGTTAATTATTTAATTAATTATATTTTTTTAATTAGCAGGATTACAGCAAATGGGTGTTGTGCAGAGTTTACGAAAGAGATGAAGAGAAGGAAGAAGAGGAAGAAGAAGATGGGGCTGAGCTGTCGTGTTTGGATGAAGTTTTTTTATCCTTAGAGGATCTCGACGAAATCAGCTTACCCACTCGCATCCAATAATGCGTCCCAAACACGCGCTTCCCACGTGCTCTCTTCTACTTATTATTATTACATCCCACTACCCCCATCTCTCCCTAAATTACCAACCAACCCCTCCTCTTTTATTTTTTCCCACTTCCCCCCCCCCTTTATGTCACTTTTATTAATTACTCCTAAAAAGAAATATCCTTTTCCAAAATTCTTTTTTAATTATTAGATTTTCCTTTTTTCCTTTTTTAATTA TCTTCTTCTCTTCTTCTTCCAAATTAACCTCCATGGCGGCAGCCGATCATTCCCACAACTTCAACCTCCCGCCGGGCTTCCGATTCCATCCGACCGACGAAGAACTCGTCGTCCATTTCCTCCACCGTAAGGCGGCCTTGCTCCCGTGCCACCCCGACGTCATTCCCGATCTCGATCTCTTCCCCTACGATCCGTGGGAGCTCGAAGGGAAGGCGTTGGGAGAGGGAAACCGGTGGTATTTTTATAGTAGAAAGATTGATGCTCGAGTTACTGATAATGGCTATTGGAATCCATTGGGGAGAGATGATCCTGTCCTCTCTACTGCCACCTCCCAAGTTGTTGGAATGAAGAAGTATTTTCTTTTTCACGCCGCCGCCACCGCCACCGCCTCCGCCGCCGCCGATCCAATCAAAACTAATTGGATAATGCACGAGTATCGTCTTCCCGATGCTGCCTCTTCCTCTTCCTCTTCCTCGTCCTCCTCTACTAGATCGTCCAGACGCCGAGGACGGCCGAAAAGAGATTACAGCAAATGGGTGTTGTGCAGAGTTTACGAAAGAGATGAAGAGAAGGAAGAAGAGGAAGAAGAAGATGGGGCTGAGCTGTCGTGTTTGGATGAAGTTTTTTTATCCTTAGAGGATCTCGACGAAATCAGCTTACCCACTCGCATCCAATAATGCGTCCCAAACACGCGCTTCCCACGTGCTCTCTTCTACTTATTATTATTACATCCCACTACCCCCATCTCTCCCTAAATTACCAACCAACCCCTCCTCTTTTATTTTTTCCCACTTCCCCCCCCCCTTTATGTCACTTTTATTAATTACTCCTAAAAAGAAATATCCTTTTCCAAAATTCTTTTTTAATTATTAGATTTTCCTTTTTTCCTTTTTTAATTA ATGGCGGCAGCCGATCATTCCCACAACTTCAACCTCCCGCCGGGCTTCCGATTCCATCCGACCGACGAAGAACTCGTCGTCCATTTCCTCCACCGTAAGGCGGCCTTGCTCCCGTGCCACCCCGACGTCATTCCCGATCTCGATCTCTTCCCCTACGATCCGTGGGAGCTCGAAGGGAAGGCGTTGGGAGAGGGAAACCGGTGGTATTTTTATAGTAGAAAGATTGATGCTCGAGTTACTGATAATGGCTATTGGAATCCATTGGGGAGAGATGATCCTGTCCTCTCTACTGCCACCTCCCAAGTTGTTGGAATGAAGAAGTATTTTCTTTTTCACGCCGCCGCCACCGCCACCGCCTCCGCCGCCGCCGATCCAATCAAAACTAATTGGATAATGCACGAGTATCGTCTTCCCGATGCTGCCTCTTCCTCTTCCTCTTCCTCGTCCTCCTCTACTAGATCGTCCAGACGCCGAGGACGGCCGAAAAGAGATTACAGCAAATGGGTGTTGTGCAGAGTTTACGAAAGAGATGAAGAGAAGGAAGAAGAGGAAGAAGAAGATGGGGCTGAGCTGTCGTGTTTGGATGAAGTTTTTTTATCCTTAGAGGATCTCGACGAAATCAGCTTACCCACTCGCATCCAATAA MAAADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALGEGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAATATASAAADPIKTNWIMHEYRLPDAASSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEKEEEEEEDGAELSCLDEVFLSLEDLDEISLPTRIQ
BLAST of Cp4.1LG15g02500 vs. Swiss-Prot
Match: NC104_ARATH (NAC domain-containing protein 104 OS=Arabidopsis thaliana GN=NAC104 PE=2 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 6.0e-69 Identity = 128/200 (64.00%), Postives = 154/200 (77.00%), Query Frame = 1
BLAST of Cp4.1LG15g02500 vs. Swiss-Prot
Match: NAMB1_HORVS (NAC transcription factor NAM-B1 OS=Hordeum vulgare subsp. spontaneum GN=NAM-B1 PE=3 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 8.5e-31 Identity = 77/197 (39.09%), Postives = 108/197 (54.82%), Query Frame = 1
BLAST of Cp4.1LG15g02500 vs. Swiss-Prot
Match: NAM1_HORVD (NAC transcription factor NAM-1 OS=Hordeum vulgare var. distichum GN=NAM-1 PE=3 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 8.5e-31 Identity = 77/197 (39.09%), Postives = 108/197 (54.82%), Query Frame = 1
BLAST of Cp4.1LG15g02500 vs. Swiss-Prot
Match: NAMB2_TRITD (NAC transcription factor NAM-B2 OS=Triticum turgidum subsp. durum GN=NAM-B2 PE=2 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 3.2e-30 Identity = 79/195 (40.51%), Postives = 109/195 (55.90%), Query Frame = 1
BLAST of Cp4.1LG15g02500 vs. Swiss-Prot
Match: NAC68_ORYSJ (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.2e-29 Identity = 79/198 (39.90%), Postives = 107/198 (54.04%), Query Frame = 1
BLAST of Cp4.1LG15g02500 vs. TrEMBL
Match: A0A0A0K5V4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G058030 PE=4 SV=1) HSP 1 Score: 356.7 bits (914), Expect = 2.0e-95 Identity = 176/212 (83.02%), Postives = 190/212 (89.62%), Query Frame = 1
BLAST of Cp4.1LG15g02500 vs. TrEMBL
Match: A0A060A5Q2_BOENI (NAC domain-containing protein OS=Boehmeria nivea GN=NAC25 PE=2 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 1.6e-73 Identity = 143/210 (68.10%), Postives = 164/210 (78.10%), Query Frame = 1
BLAST of Cp4.1LG15g02500 vs. TrEMBL
Match: A0A0B0MJ14_GOSAR (NAC domain-containing 68 OS=Gossypium arboreum GN=F383_18518 PE=4 SV=1) HSP 1 Score: 275.4 bits (703), Expect = 5.8e-71 Identity = 138/204 (67.65%), Postives = 159/204 (77.94%), Query Frame = 1
BLAST of Cp4.1LG15g02500 vs. TrEMBL
Match: W9RXQ8_9ROSA (NAC domain-containing protein 68 OS=Morus notabilis GN=L484_024182 PE=4 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 7.6e-71 Identity = 136/202 (67.33%), Postives = 160/202 (79.21%), Query Frame = 1
BLAST of Cp4.1LG15g02500 vs. TrEMBL
Match: A0A0D2RJJ0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G217400 PE=4 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 7.6e-71 Identity = 137/204 (67.16%), Postives = 159/204 (77.94%), Query Frame = 1
BLAST of Cp4.1LG15g02500 vs. TAIR10
Match: AT5G64530.1 (AT5G64530.1 xylem NAC domain 1) HSP 1 Score: 261.9 bits (668), Expect = 3.4e-70 Identity = 128/200 (64.00%), Postives = 154/200 (77.00%), Query Frame = 1
BLAST of Cp4.1LG15g02500 vs. TAIR10
Match: AT1G52880.1 (AT1G52880.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein) HSP 1 Score: 130.2 bits (326), Expect = 1.5e-30 Identity = 73/177 (41.24%), Postives = 97/177 (54.80%), Query Frame = 1
BLAST of Cp4.1LG15g02500 vs. TAIR10
Match: AT1G61110.1 (AT1G61110.1 NAC domain containing protein 25) HSP 1 Score: 127.9 bits (320), Expect = 7.6e-30 Identity = 74/183 (40.44%), Postives = 100/183 (54.64%), Query Frame = 1
BLAST of Cp4.1LG15g02500 vs. TAIR10
Match: AT3G15510.1 (AT3G15510.1 NAC domain containing protein 2) HSP 1 Score: 124.0 bits (310), Expect = 1.1e-28 Identity = 73/196 (37.24%), Postives = 107/196 (54.59%), Query Frame = 1
BLAST of Cp4.1LG15g02500 vs. TAIR10
Match: AT1G01720.1 (AT1G01720.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein) HSP 1 Score: 124.0 bits (310), Expect = 1.1e-28 Identity = 74/178 (41.57%), Postives = 91/178 (51.12%), Query Frame = 1
BLAST of Cp4.1LG15g02500 vs. NCBI nr
Match: gi|778724251|ref|XP_011658766.1| (PREDICTED: NAC transcription factor NAM-B2 [Cucumis sativus]) HSP 1 Score: 356.7 bits (914), Expect = 2.9e-95 Identity = 176/212 (83.02%), Postives = 190/212 (89.62%), Query Frame = 1
BLAST of Cp4.1LG15g02500 vs. NCBI nr
Match: gi|659110479|ref|XP_008455246.1| (PREDICTED: NAC domain-containing protein 68 [Cucumis melo]) HSP 1 Score: 352.1 bits (902), Expect = 7.1e-94 Identity = 174/212 (82.08%), Postives = 188/212 (88.68%), Query Frame = 1
BLAST of Cp4.1LG15g02500 vs. NCBI nr
Match: gi|640938595|gb|AIA57529.1| (NAC domain-containing protein [Boehmeria nivea]) HSP 1 Score: 283.9 bits (725), Expect = 2.4e-73 Identity = 143/210 (68.10%), Postives = 164/210 (78.10%), Query Frame = 1
BLAST of Cp4.1LG15g02500 vs. NCBI nr
Match: gi|728811644|gb|KHG00342.1| (NAC domain-containing 68 [Gossypium arboreum]) HSP 1 Score: 275.4 bits (703), Expect = 8.4e-71 Identity = 138/204 (67.65%), Postives = 159/204 (77.94%), Query Frame = 1
BLAST of Cp4.1LG15g02500 vs. NCBI nr
Match: gi|823160215|ref|XP_012479949.1| (PREDICTED: NAC transcription factor NAM-B2-like [Gossypium raimondii]) HSP 1 Score: 275.0 bits (702), Expect = 1.1e-70 Identity = 137/204 (67.16%), Postives = 159/204 (77.94%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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