CsaV3_6G007010 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGCAGCAACAGTAGAGTTGATAACTTCCTTAATAACTTGTTTGTACACCTTAGAAGGTCCCAGTATCTCTAATAGAATGTCTCGGGGTATCTGTTGAGAACAAATGATGAACTTATCAGTAACTTCTCATGTCTTCCCAATTAAGATTGTCAGTAGTTACTTCCTGAAAACCAACAGATTGAGAGTAAAGAAAACTTACATTTGGCGTCTTTCCTGACATCCAACGAAGAGCAGCATGTTTCAAGTCCAATGAAATGAATCGAGGAAAAGAAAAAAGAAAATTAAGCAAATCGGCTCTCTGATTGTTTAGAGAGATCGTTTAGTAACAATTTCATCTCTCTAAGATGAAGATATCTCAATCACCCATAACCTTAAACAAGATTGTTTACAAGTGCTCGCCAGAAAATTAATGGAGCCAGAACAATGTTATGATGATTTTGAGAACGTGAAAATGAAGACAACGAGCACTTCAAAAATAAGAAACATGCCTCCGGATATTACCTCCTTTCACTCTTCTAAAACCTGGAATAGGTTGGGCTTCAGCTACCATTCTGTCAAACACGACATTGAAAATTGCTCGAGTTTTGGCTCCTGACACCTCAACACGAATCTGGTTGCAAACTCCAAAAAATGAAACGTTATGGTAATAATAAGAGTTCCTAAATTTGCATTACATTGTTGTGCATACAACAAGGGTTTAAATCCAACTTCAAAACCTGTATTTTCATGCTCGTTTTATTTTGGTCCCCAGAGATTCAAATATTCTATTTCAATCCCTAAATTTTTGCCTCAAAAATCATTTCAGGTGTGAACGTTATTTTTTTATAAAATTTTAACAGAAACCCAAATAGGTATATCTCTTCGTCTTAATTATTTACAAGATGACTGATTTCTGTGGTGGATAGGTACATTGGTCACTAGTAGGTTCAATTTTGGATTTCAAAGTGAAGTAGTTTTTTTTGTTTAAATGACTGATGAATTATTAATGGCAAGGACTAGAATAGTTCTTCGGGATTAAATAGAATGCGTTAAAGTGAAGTAACTAAAACTTATATTTGAAAGTTTAGGGTCAAAAACAAAATAACTGAAAATTCTAAATTCTAAATAGGACTTAAATGAAGAATAAAAATGTGAGGGTGACAGACAAGGATTCTGAGAATAAACTCACCATGTTTCATACCTTTAGTTCTTTATTCTCCTTTGTATTGGTAACATTAGTGACGGAGAAGTCTTCAAACTGAGAAGATGAAACACTCACATTTTCTGCTCAGAATGAAATTAGAAGTTTTATCCAACATAGTCCTTATACAAATGGATAATGTTGAAATTTCTCTAGGAACAGAAGGAAGTGTATTGTAACCTGATAACACAGCACAAGCAGCTGGAAGATATCTGTTATTTTTACTGCAGAGTGAACATATAACTTTTATAATTAGGAACATACACAACTACTTGTCTTTCAAAACCATACAAGTGATTATGGCTACATAAAATTTTATCCAAAAATGTATTGGCCGCCCTGATGATGAATTGGTGATTTCAGATGATATTCCATGTTAACTTCCTGTTTTGAGTGACTAAATAACAGGACAGGATGCGAAGCATCTAATTCAGAAAATGGAGCAGATCATGAGCATTTAGACTTGCATGCACAAAATTTGCTAGTAAAGCTAGTCTCTTATGAGTTTATACGTTTGGTAAACTTCGATGGTTAACCAATCAGCTCCATCATATGAAAGAAAAGTCCAAAGTAAGTCAATTATCTTCTAAAGTCTTTCTAATTCGGGGCACCATCATTCATAGTTTGGGTTATCATTAGAAACATGGTCAAATTGATATGAAATTACCTCAAGGAAATTTTCCTGCTACCATATCTAATTTGACTGGGAAAAGATACACCTATGCAAGTGAGGTTTGGAGTAAAGTAATCTGTTGTCTGCTTATGATATATAGCCTACATACAATTAAGAAAGAAGGCTGAATAAGAATGAATAAACTTCAGATGAATATAAACAGAGACACCAAAATACTAAGCTACTTTGGCACTTTACACAACCTTCCCCATGTGGGATTTTTCCCCCAGAAAACCAACAGCTATTTTAGCACAAATAGTTCTGACCCAATACACAATATTCAGTGTTATTGCTTGTTACCTCTGTTCTTCACTGCTCATTCAATATAAAGCAATAACATACTGGAAAATTCCATGGATTTATGATTCACTGAAAGTAGAGAAACACAAATTGAGGCGGAGAGAAGGGATGGATTACCTTGGGATTTACAGAAAGAAAGAAGTTGGCAGCAGCAATTTGCATTGTCTCTCTCTGTCTCTCTCTCGTCGCTCTTATCCTCTTTCACCCAAACTCAACCTCCGTTTCATTCAAAACAATGGTTTTCGGTTCAACCAAAATTTTCTTTTCTTTTTTCGAAGTTAAAAATTTTATTTTCTTTTTCCTTTTTTTTTAATGGTTTGTAAGTATTTAACGTCCAACCGCAACGGCGTCGTATTACAACTCGGATAAGTCTCTATTCTGTGAGAACCGAAGACACCGAGCGGCGCTTGGAAAAATGATGTCCGCCACCGCAACCGCAACCGCAACGGTGACCAACATCGCCTCAGAATTCCCGCGGCCAATATTCACCAAAGTAAGCAATTCAATGCACTTCAGCTTCTTTTCATTCCAAGTATTCTTCATAAGCCAAACCAATAACTCGAATTTTTAAGCTCCACCGTATTTTGCCGCCTTCCTATATAAGTTTAGGATGTTATCATTTTCAATTTTTTTTTTTTTTTTTTTTTATGCTTCAGGTTCCTGTTAAAGGCTATTGCCATAATGCTCTGGTTTGTTTGAACTTTGGTGGCGTTGAATTTGATAATGTACGAGATGGGTTGTGTAGGAGGTAAACATGTACTTTTGGTTGGTTTCCAATTTCGATATTGATTCTTAATTTCTTGTTTTTTTTCTTGGGAATTGTAATTACATATGTAGCTTAGAATTGTTCTATTGCAATGGCATTTGAATTGAACAGGAAAACTGATGGATAGAAGTGGGAACATTTTTTTCATTTACAGGTCGTCATTTTCTTATAGCTTCCATAAAATTGGTTCCAGATTTTTGTCGAAACCGACGTCCATAGCTAGTTCAGGTAAATCTGCATACTTAGATTGTTATCATATTGATTGAAGTTTTTACAGTTAAAAGACTGAATGACCAATTTTAAACTATAAGAACGAAGTCATTTCATACTTAAAGTTCATCGACTGGGTCATTGGAAATGTTAATATATAGGAATCAAGTTGTTACATGGTAAAGTTCATGGACTAATTAAATTGTTTATTTGACAGTATTTTATAACCTTTATAACCATTCTTCTTTTCCCTTCCCTTTGTTGTTTGGGAATCTCATTTATTTTTAATGTAGGTTGGAAAGAGTACAAAAATAGAGTAATTAGGAAGCAAATGACAAAAGTAAAGACAGTTTTACTAGTGAATCGCTGTTTAGTATGCACGAGGAGAGTATGATATACTATCTTCTATAATATGTATTAGAAAATTGTGTCTAGTATATCGCAAATCATGTGTATCCAACTCAGTTGTAGACCTAATAAATCATGGGAAGAAACATAGTAATGGATTTGGTAAAATTTATCCCAGTTTTGTCATTAGTGTTAAATCATTAACTATCACTTTTCAGTCAACTCTAGTTGTGCAAAAAGACCCTTTTCTGGATAGATTATGCTGTTTAGTTGATCATCTGTCTTGATTTCATAGGTTTGGAGGCAGCCATCACGGATTACAAAGGCAATCCAATAACGTTGAAAAATGCTAAAGTAGTTGTAGAATCTGAGGAGGAAAACAAGATACAAGTAAGATTTGAATTTCTAGTAATCATTAATAATTTTATTTTGGAAGAGTCCCTGCCTCTCAAAGTGTGTTTGGTTATTGCAAATTTTCTTTTCTATGGAAATCCAACTTAAGTGTTACCTCTTACTTCCATGCTCAATCTCAATCAAGATTGAGTTCCTATCATCATTCCCTTTAATACTTTTTTTGATATGCATTTAGTATTAGTGACCTATAAACAATGTCTCTCATGAAATCTAATTGACAGCTAAGAGTGGACTTGACTGGGGATGAGACACAAAAGGTATTTGATCAGGTTTTGACAAACTTAGCCCGCTCAGCACCACCCATGCCAGGATTTCGTAAGCAAAAAGGAGGTAGTACCATGACTTTCATCTCCTTCCACTTTGAATGTTACAAACCACTAATTCATCTGCAGCACAAGTCTTTTACGTGTTCACCATCCATATAGAAAAGTATGGGAATTGAGACTGCCTTTCCTATCCTTAAGCGTTCATATGTGTAGCTGCTTTTACAGCTTATAAGTTCTTATTTCTCGTAGCAGATGACTTTATATGGTTTCTAATGCTTTCCTGTCTTCATGCACGTTGATGCTTTACCAGGGAAAACATCAAATGTGAGTTGCTGCTACTCTTTGCTTTTTCTACTTTACCAGCTTTGTGTTTGCAAGAATTTTCAAAGTTGCTGTTTATATCCAAGTCATCTAATACCTTGCCATCTTTGATAATACTCCCAAGTTTGGTATTTTTTTTTTTTCTTTGTAGTGATTTAGTTCTAATGTTTTATTGTTAAAGAAGTTTGAGTCATCAAGTTACAAATCGCATGAGGTGATTGAATAATGTGTTCATTAAAAATTTGTTTTTTTTTATTTGGATAAATTTGATTTCACACATGATTCATTTCTTCTCAGTATCCTTATTCATTTTTTTGGGCATGTTATGTGAGATTTACATCCTAGTTGCACACAGTATTCTATTCTTCACAAGGTTTTTATTTCTCAATAATTACTTCCTTCAGGTCCCAAAAAGCTTCCTCTTAGAAGTTCTTGGTAAGGACCGAGTCACGAAGTTCATCATACAAGAAATATTGAACTCAACTATGGTAGATTATGCAAAGAAGGCAAGTTTTCTCCTTATTCCCTTATTCCCAGTGCTTATATGGTGATTGTAACTTAGAGATGTTTTTAAATTGGTTTTTCAAGATGGCTTATAGAATTCAATGATATTTGGGTAAGTAAATTCACTATTTATGAACACATCATTTCAAAAAATTTAAAAATTGTTACAAATTAACTTGGATGATTATGTATATATAGTTAAACTATATTCTTAAATTTTAAATTTTGATTTTATGTGGTTTCTACATCATTAACTAAATCATGACCTGACATGTCTATTAGAAAAATGTCTCGTTGATTTGGCAACCATAGCTAACAAATGATGGAAAGAAGTTACCATTTGATAAAATAGGAGTGGCATGATTTATGGACTGAATTTGATATATTACTTGCAAGTAATTGATATGTTTCCTGTGCTGCCTTCTTTTGTTAACGTTGTCCATTTGCTTTTTTCCATTATCTGTCCTGCTGTGCCCAATCAACCAATGTCTATCTAGTTAGAGCATCTGATATTACCATTTAGTCAATAGTATTGATGTTAGTATCTAACATCACTAACATCAATACTAACAATAAACATTCAAACTTTACATGTGTAACCGAACCTTTTCAAAAACTAGGTAGACAAGACATGGTTCACAGTTAAGTTAGTAATTTATCAAAAAGCGGAAGTTTAGATAAACATAAGCTCAACTTTTTTCTTTTCTTTGGACTTCAACACAGGAAAACATAAATGTGAAGGACAAGAAGGTTAGCACAACACAAACAGCAGATGAACTGAAAGTGTTGTTTAATCCAGGAAAAGAGTTTGGTTTTAATGCCATACTTGAACTTGAATCTGCTTCAGATGCTGAAAGTTGAGCTTAAACATGTCCCATTTTTTCAAGTGAAGATTTTGTCCCTTTATTCTTCAATGGGCCTCCTGGTGTCAAAAGCCTTGGAAATTTTACTTGAAACTGATGAAGGCTTATGCATAGTTGAATATCAATACATATATTGTAAACGTGAAATGAACAGTTTGGAGTTTGTTCTGATTAATTTATGTTAGATTTTTATTTTCTGTCTAAGTGCTTTTTAGAAATGTTATCAAAAGCTAATCCAAATTTTGAAAAAGTTAAATTCGTTTTCATTTTATTTCAGTTTTGAAAATTAAATTTATG ATGATGTCCGCCACCGCAACCGCAACCGCAACGGTGACCAACATCGCCTCAGAATTCCCGCGGCCAATATTCACCAAAGTTCCTGTTAAAGGCTATTGCCATAATGCTCTGGTTTGTTTGAACTTTGGTGGCGTTGAATTTGATAATGTACGAGATGGGTTGTGTAGGAGGTCGTCATTTTCTTATAGCTTCCATAAAATTGGTTCCAGATTTTTGTCGAAACCGACGTCCATAGCTAGTTCAGGTTTGGAGGCAGCCATCACGGATTACAAAGGCAATCCAATAACGTTGAAAAATGCTAAAGTAGTTGTAGAATCTGAGGAGGAAAACAAGATACAACTAAGAGTGGACTTGACTGGGGATGAGACACAAAAGGTATTTGATCAGGTTTTGACAAACTTAGCCCGCTCAGCACCACCCATGCCAGGATTTCGTAAGCAAAAAGGAGGGAAAACATCAAATGTCCCAAAAAGCTTCCTCTTAGAAGTTCTTGGTAAGGACCGAGTCACGAAGTTCATCATACAAGAAATATTGAACTCAACTATGGTAGATTATGCAAAGAAGGAAAACATAAATGTGAAGGACAAGAAGGTTAGCACAACACAAACAGCAGATGAACTGAAAGTGTTGTTTAATCCAGGAAAAGAGTTTGGTTTTAATGCCATACTTGAACTTGAATCTGCTTCAGATGCTGAAAGTTGA ATGATGTCCGCCACCGCAACCGCAACCGCAACGGTGACCAACATCGCCTCAGAATTCCCGCGGCCAATATTCACCAAAGTTCCTGTTAAAGGCTATTGCCATAATGCTCTGGTTTGTTTGAACTTTGGTGGCGTTGAATTTGATAATGTACGAGATGGGTTGTGTAGGAGGTCGTCATTTTCTTATAGCTTCCATAAAATTGGTTCCAGATTTTTGTCGAAACCGACGTCCATAGCTAGTTCAGGTTTGGAGGCAGCCATCACGGATTACAAAGGCAATCCAATAACGTTGAAAAATGCTAAAGTAGTTGTAGAATCTGAGGAGGAAAACAAGATACAACTAAGAGTGGACTTGACTGGGGATGAGACACAAAAGGTATTTGATCAGGTTTTGACAAACTTAGCCCGCTCAGCACCACCCATGCCAGGATTTCGTAAGCAAAAAGGAGGGAAAACATCAAATGTCCCAAAAAGCTTCCTCTTAGAAGTTCTTGGTAAGGACCGAGTCACGAAGTTCATCATACAAGAAATATTGAACTCAACTATGGTAGATTATGCAAAGAAGGAAAACATAAATGTGAAGGACAAGAAGGTTAGCACAACACAAACAGCAGATGAACTGAAAGTGTTGTTTAATCCAGGAAAAGAGTTTGGTTTTAATGCCATACTTGAACTTGAATCTGCTTCAGATGCTGAAAGTTGA MMSATATATATVTNIASEFPRPIFTKVPVKGYCHNALVCLNFGGVEFDNVRDGLCRRSSFSYSFHKIGSRFLSKPTSIASSGLEAAITDYKGNPITLKNAKVVVESEEENKIQLRVDLTGDETQKVFDQVLTNLARSAPPMPGFRKQKGGKTSNVPKSFLLEVLGKDRVTKFIIQEILNSTMVDYAKKENINVKDKKVSTTQTADELKVLFNPGKEFGFNAILELESASDAES
BLAST of CsaV3_6G007010 vs. NCBI nr
Match: XP_011656737.1 (PREDICTED: uncharacterized protein LOC101212225 [Cucumis sativus] >KGN46335.1 hypothetical protein Csa_6G086160 [Cucumis sativus]) HSP 1 Score: 446.0 bits (1146), Expect = 7.6e-122 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0
BLAST of CsaV3_6G007010 vs. NCBI nr
Match: XP_008460020.1 (PREDICTED: uncharacterized protein LOC103498959 [Cucumis melo]) HSP 1 Score: 421.8 bits (1083), Expect = 1.5e-114 Identity = 222/234 (94.87%), Postives = 227/234 (97.01%), Query Frame = 0
BLAST of CsaV3_6G007010 vs. NCBI nr
Match: XP_022155406.1 (uncharacterized protein LOC111022553 [Momordica charantia]) HSP 1 Score: 368.6 bits (945), Expect = 1.5e-98 Identity = 188/232 (81.03%), Postives = 207/232 (89.22%), Query Frame = 0
BLAST of CsaV3_6G007010 vs. NCBI nr
Match: XP_023004174.1 (uncharacterized protein LOC111497577 [Cucurbita maxima]) HSP 1 Score: 364.4 bits (934), Expect = 2.9e-97 Identity = 192/233 (82.40%), Postives = 207/233 (88.84%), Query Frame = 0
BLAST of CsaV3_6G007010 vs. NCBI nr
Match: XP_022960370.1 (uncharacterized protein LOC111461115 [Cucurbita moschata]) HSP 1 Score: 353.2 bits (905), Expect = 6.7e-94 Identity = 188/224 (83.93%), Postives = 198/224 (88.39%), Query Frame = 0
BLAST of CsaV3_6G007010 vs. TAIR10
Match: AT2G30695.1 (FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 113.2 bits (282), Expect = 2.1e-25 Identity = 52/126 (41.27%), Postives = 90/126 (71.43%), Query Frame = 0
BLAST of CsaV3_6G007010 vs. Swiss-Prot
Match: sp|Q3M725|TIG_ANAVT (Trigger factor OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=tig PE=3 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 3.3e-07 Identity = 39/126 (30.95%), Postives = 68/126 (53.97%), Query Frame = 0
BLAST of CsaV3_6G007010 vs. Swiss-Prot
Match: sp|Q8YQX9|TIG_NOSS1 (Trigger factor OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=tig PE=3 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 3.3e-07 Identity = 39/126 (30.95%), Postives = 68/126 (53.97%), Query Frame = 0
BLAST of CsaV3_6G007010 vs. Swiss-Prot
Match: sp|B1XL18|TIG_SYNP2 (Trigger factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=tig PE=3 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 4.3e-07 Identity = 34/125 (27.20%), Postives = 66/125 (52.80%), Query Frame = 0
BLAST of CsaV3_6G007010 vs. Swiss-Prot
Match: sp|B2IT89|TIG_NOSP7 (Trigger factor OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=tig PE=3 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 2.0e-04 Identity = 35/126 (27.78%), Postives = 66/126 (52.38%), Query Frame = 0
BLAST of CsaV3_6G007010 vs. TrEMBL
Match: tr|A0A0A0K988|A0A0A0K988_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G086160 PE=4 SV=1) HSP 1 Score: 446.0 bits (1146), Expect = 5.0e-122 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0
BLAST of CsaV3_6G007010 vs. TrEMBL
Match: tr|A0A1S3CBN2|A0A1S3CBN2_CUCME (uncharacterized protein LOC103498959 OS=Cucumis melo OX=3656 GN=LOC103498959 PE=4 SV=1) HSP 1 Score: 421.8 bits (1083), Expect = 1.0e-114 Identity = 222/234 (94.87%), Postives = 227/234 (97.01%), Query Frame = 0
BLAST of CsaV3_6G007010 vs. TrEMBL
Match: tr|A0A251RKJ4|A0A251RKJ4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G586900 PE=4 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 9.7e-65 Identity = 136/217 (62.67%), Postives = 167/217 (76.96%), Query Frame = 0
BLAST of CsaV3_6G007010 vs. TrEMBL
Match: tr|A0A251RKM3|A0A251RKM3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G586900 PE=4 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 1.4e-63 Identity = 132/202 (65.35%), Postives = 162/202 (80.20%), Query Frame = 0
BLAST of CsaV3_6G007010 vs. TrEMBL
Match: tr|A0A2P4KWJ5|A0A2P4KWJ5_QUESU (Trigger factor OS=Quercus suber OX=58331 GN=CFP56_31076 PE=4 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 1.3e-61 Identity = 129/220 (58.64%), Postives = 161/220 (73.18%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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