CsaV3_5G013870 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_5G013870
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Transmembrane protein
Location	chr5 : 10657224 .. 10662516 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTTATTTTTGAAAAAAGTACATCATTCTCAAAAGTTATCCCTTCACGCCCCCACGTAAACCCCCCTCAAATCCGAGTCCTCAATTTTGAACCTTCTCATTTGGACCCCTAATTGTTCTTCAATTTTCACTCGCTCTCAGTTTTCAGCTGTAGTCTCTTCAATCTACATTTCACCCTTCCCCAAATTCTTTCATCCTTTAACTGCCCAACCTTCAATCGCAGCCTGCTTCTAAGTTTGTTCGCGATTCATTTCCGTGAGCCTGTAATGGTGATTCGATGTTTATAACCCTTGTTTTGTTCATTACTAGGAGCCTCCAATCTTGCAAATATGCGGCTGTATTACGGAGCCAAAGAGATTCTAAAGATTCAAAAATTTCGCAGAATTGTGTCCTATACTGGATTCTATCTTTTCGCTTCTGTTTTGAGCTACGCTTATACAAGCAATACGTGAGTTTAGCCATTGCCCATCGAAGTTCTCCTCACTTTTAGTTTTATTCTAATTTTTTTTCTGGTATTGCAGAACTAGAGCTGGGTATTCTCGAGGGGATCAATTTTATGCTTCTTACCCTGCTGGTACAGAGCTCTTGACAGACACCACAAAGGTTTTGGCATTCTTTGATTTGGGTTCACTGTTTTTTAAGTTCTATGACTCTTGGTACTAATTTTCTTTTTAATTGCTGTAGTTGTATAAAGCTGCTCTTGGTAATTGCTTTGAATTAGAGGAATGGGGTCCAATTGAATTTTGCATCATGGCTAAACATTTTGATCGTCAAGGAAAATCGCCTTATGCATATCATTCTGTAAGTTTGTCCTTGGCTGGTCTCTTTTTAGTGTGGGGCACAATTTAATTACATCTGAGTATTGAACTTTTATGTATTCCATTGATTTCTAGTCCGATCTTGTGTTCAATTTTGTGATATTATTATGGGAGTTGAAAAATATTCGTATAGAAGTTGCTGTGCAGCTACTTAGAATTTTGAAATTTTCTGCTGTGTCAAGAGTTCAACAATGATGTTAAGATGAAAAAGGACCCTTTTCTAAAGTCCTTATGGCAATGAAATGAGAGGAGCATGGAGAGCATGCTAATATCTAAGTTTTGCAAGAGCATTTCTTTAATTTTATTGAGTTTGTTTTGGAAGATGGGAGAAACGTTAGGTTTTGGGAAGATAGTTGGTGTAGCCAACAACCCCTGTGTATCATGATATTTATACCAACTCCACTAAAAAAGAAGCAGCTCTTGCTTATTTTTGGAACTCCACAAGCCAATCTTGGGATTTAGGGGTTGAGTAGAAACCTTTTCAATAGAAAATTTGGTACCTACATTGCTCTTGCTCAATCACCGAACTCTTTTCAAATCATTTTCACTCATTTCTCTCCAACTCCACCCTCTTTTGAATTCTCCAAATCTCCCCGCCAACCAACCTTCTTGTCGGTTTCTGCCAGTTTCCCCATAGTTTGGATGCCAACCCTCTTGCCAGTCGCCAGTTTCTTTATGTATCTCTTCTTTTAATTGTTTTTCTATTTTTCATGCTTTGTGGTCGAATAATGGACAATATGATATCAAATCAATTATCATATAATTTTTTTTTCACTAAATCTTATTTGGTTATTTTTCTGTTTTTATTTTAAATTTAGTATGGCAGAATCATCTTCAAGTCATACCGAAATTAATTCAAGAATGACTACTGAAGATGAAAAAAAACTGTCATGGCAATATGTGACAAAACATGAAAGATTTTGTGGTGTTGGAGGGAATTGTGCTTGGCAATTGAATTTTTGTCAAGAAAGGAGGAAAGGTTCTTATACAAGAGTTTGGACACACCTATTAGAAATGGTTGGATTTGGGATTGGGGTATGTAAGGTCACCCCTAAAGATCTTGCTGACATGCAAAGGTTAGAAGAGGAAGCTAAAGTTCGTGTGGCAAACAATGCTCCTAAGTAAGTTCCATTACCACCTTCACAACATATGCAAACTAAATCTCAATCTTTTGGATCAGGAAGCATGGGTAGCTATTCATATTCTTTTTCACCAATGGAACAAAAGAGAAGTAAAGGAAATGTTAGTGCTCTTGAGAAGTCATTTAATTTGGTACTTCGTGATCAAGTAGATTCGGAGATAGCTAGAATGTTTTGTTCTTCAAATTTGCCTTTCCATTTGGTTAGAAATCTACATTATGTGAACCCTTTTGCTTTGGTTGCAAATAATTTTTTGTCCGGTTATTTACCTCCGGGTATAATAAACTGAGAACAAGTCTTCTTCAAAAAGAAAAGGCAAATGTCGAGAGATTGTTGCAACCTATTAAAACTACATGATCTGCAAAGGGAGTAAGTATTATTAGCAATGGTTGGAGTGATTTGCAAAGGAAGCCATTAATTAATTTTATGGTAGTTACAAAAGGAGGACCAATGTTTATTACAGCTGTAGATTGCTTAGATGAGAGAAATGATAAATATTTCATAGCAAATCTGATGAAAGACCTCATAAATGAGGTGAGACATGAAAATGTGATTAAAATAATCACTCACAATGTTGCAAATTGTAAGGGTTTAAGATAAATTATTGAATCACAGTTTCCCAACATAGTTTGGACACCACGTGTAGTTCATACCCTTAATCTTGCTTGGAAGAACATATGTGCTGCAAGAAACATTGATAGTCCCAACATGTATTTGTAGAGTGTAGCTGGATTTCTGAAATTTCTGATAGTGTTATGTTTATATAACACTTTATAATGAACCATCCTATTGGACTAGCTATGTTCAATGAGTTTGTATTTGAAGTTACTTGCAGTAGCTTAAACACATTTTGCATCTACCATCATTATGCTTAGAAGATTTAAACTCATTAAGGGTGGTTTACAAATAATCATTACCAGTGATAAGTGGGGATGCTACAGAGAAGATGATATGGGGAAAGCAAGACGTGTAAAGTAGTTGGTGCTTGATGATGCTTGGTGGGAAAAGGTTGATTATATCATTTCTTTTACTGGTCCTATTTATGGTATGATTAGAGATTGTGATATGGACAAACCTTGCCTCAATTTGGTATATGATATGTACGACACCACAATAGAAAAAGTGAAATTGACAATGTGTAAACATGAAGGAAAGCGCATCGATGAATTTTCATCTTTTTATGACGTGGTGCACCAAATTTTGATTGATCGATGGAATAAAAATAACACCCCTCCATTGTAGCACATTGTCTAAATCCAAGGTACTATAAGTCTATCTTAGATCTTTATTTTATTTTTTCAATTCCCAAACACACCCTAAAGTTTGGTCTACTTAAATTTTATTTAGGTATTGTTGTGCACAATGGCTTCAAGAAGACAAGTCTCAAGTCCCACCACATCAAGACATAGAAGTAGAAATAAAGAGGATGAAGGGTATTAAGAAATATTTTAGTTTAGAGGATGAGTGCACAAAAGTGAACATTGAATTAGCCAATTTATCTACAATGTCTGAACAGTTTGCTAATCATGAATCCATACGTAATAGATATGATATGCCTTCGAACAGTTGCTAGGCCATCCATGGTGCGTTTACTCCAACTTTACCATCACTAGCTATAAAGTTACTTATTCAACCTTCACCCCCCTCATGTTGTGAGAGAACTTTGAGTTCATATTCATTTGTGCACTCCATGAGAAGAAACAAGATGACACCGCAACGTGTAGAAGACTTGGTGTACATCCATAGCATTCTACGCCTTTTATCAAGAAGAACTCCTGAATATCTCAAAGTAAACAAAAATGTGGAACATTGTTGGGGATTCGTTTGATTCATTTGAAGATGCGAGAATGCTTGAGGTGGCTAGTTTATCTTTGGACGAACCAAGAAGCTATAGTTTTAGCAATGCTGGTGGTGAGGCTCAAGTTCAGGATTCTCAATAGGACATTGAAGAAGAATGAAAACATGTTCTTGATTTTATTTTGTAGTTTTGTAGTTTTTTACCTTTTGGCCTTTGGCTTTTGTTGTGTTGAACAAACTACTCTACTAAAACTTATTATGTGTTATGACTCTAAACTTATTGTTTTGATGTTTTAATTGGAATGTTTCACGATATGTTTATATGCATGACATTTATTTAATTTTTTACTAAAAATTTATCATGTCCTCAACGTGTCGTGTCCTACTTTTTTCTAAAATAGTGTTGTCGTCGTGACGTCGTGTCGCGTGTCCATATCTGTGTTTCCTAGCAATCAATCGGACAATTCTAACACTTCATTCCTTCCTTGGTGGTGATATCCATTTCTTCTCTTGGTTATGAAAATTTCGTGACTTCTTTTCCTCCGGTTTTATTTGATACATAATTTTATAAGAAACAATATTATTTAGTGCCTCCAAACTAGAAGTTCAGGATTTTTGCTCTTTCCCATTTGGTGTGTTTCTCAAGTTAAATATGCAAGTTTTGCACTTGGCAATGGAGAAAACCCAGTGTTAAAATGATTTATGTCATATAAGATTGAATATTTCCACTTGAACCCTTAAAAAGAAATAGAGCTAATGTATAAGATGAACATATATTTTGTTTTCTCGATATCAAAGGATATCTAATTCTGCTCAACTGCTATTCTTGGTTGTATTGGTTGTAGTTGTTTTATTTTGTTTCTTTGTTTCGTATGATTTTATGAATAAAAAACTTTATTTGCTTTTCAAAAAAGCAAATAAACACCATTTTCCAGAGCATTTTCTATTCACATCCTCAATACATTTCTCCCCTAACAATTTTAGGGTTGTATTATTTGAAGTATTAAAACATTATTTTTTTGCGAGGCTAACCGAAAAGGGAAGTCTATACCCAGGCCATTACAACTAAGTTGCCCTTTTTTGTTTGAAATTTGGCAGCAATACATGGCACATCTTCTGTCTCATGGACAACTTGATGGAAGTGGGTAGGATAGCATCAAATCAACCAATACCCGAAGAGCTTGACCTTGTTTGTTGGTACGAGCTGAGACTACACACCTCAATACTTGTGAATTTTGAGTATTGGGTTTCTAAATGACTGACTAAAGGATAGCTCAGTTAGTTAGGTTACTAATAACCTCATTTATGAGGGTCATAGGTTTAAATCTTCACCACTTTATTTGAATTGTATTATTCTTTAAATATATTTACAGCCATTACTCTGGACTGTTTGTTACCTTCTCTTATACTAGAATGTGCTATTGATATTCAATAAGACTGATGTCCACCTCTTCAACTGTTCCTATTTTTTATGAATATAAATACTTTTCTGGGATCTATTTTATGTATGTGTGTATAATGAATACTTTTCTTTGCTTTT

mRNA sequence

ATGCGGCTGTATTACGGAGCCAAAGAGATTCTAAAGATTCAAAAATTTCGCAGAATTGTGTCCTATACTGGATTCTATCTTTTCGCTTCTGTTTTGAGCTACGCTTATACAAGCAATACAACTAGAGCTGGGTATTCTCGAGGGGATCAATTTTATGCTTCTTACCCTGCTGGTACAGAGCTCTTGACAGACACCACAAAGTTGTATAAAGCTGCTCTTGGTAATTGCTTTGAATTAGAGGAATGGGGTCCAATTGAATTTTGCATCATGGCTAAACATTTTGATCGTCAAGGAAAATCGCCTTATGCATATCATTCTCAATACATGGCACATCTTCTGTCTCATGGACAACTTGATGGAAGTGGGTAG

Coding sequence (CDS)

ATGCGGCTGTATTACGGAGCCAAAGAGATTCTAAAGATTCAAAAATTTCGCAGAATTGTGTCCTATACTGGATTCTATCTTTTCGCTTCTGTTTTGAGCTACGCTTATACAAGCAATACAACTAGAGCTGGGTATTCTCGAGGGGATCAATTTTATGCTTCTTACCCTGCTGGTACAGAGCTCTTGACAGACACCACAAAGTTGTATAAAGCTGCTCTTGGTAATTGCTTTGAATTAGAGGAATGGGGTCCAATTGAATTTTGCATCATGGCTAAACATTTTGATCGTCAAGGAAAATCGCCTTATGCATATCATTCTCAATACATGGCACATCTTCTGTCTCATGGACAACTTGATGGAAGTGGGTAG

Protein sequence

MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDGSG

Homology

[Close]

BLAST of CsaV3_5G013870 vs. NCBI nr
Match: XP_004149132.1 (PREDICTED: uncharacterized protein LOC101204884 [Cucumis sativus] >KGN49556.1 hypothetical protein Csa_5G001030 [Cucumis sativus])

HSP 1 Score: 255.0 bits (650), Expect = 1.3e-64
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 60
           MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTE
Sbjct: 1   MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 60

Query: 61  LLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDG 120
           LLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDG
Sbjct: 61  LLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDG 120

Query: 121 SG 123
           SG
Sbjct: 121 SG 122

[Close]

BLAST of CsaV3_5G013870 vs. NCBI nr
Match: XP_022976595.1 (uncharacterized protein LOC111476941 [Cucurbita maxima] >XP_022976600.1 uncharacterized protein LOC111476941 [Cucurbita maxima] >XP_022976608.1 uncharacterized protein LOC111476941 [Cucurbita maxima])

HSP 1 Score: 249.6 bits (636), Expect = 5.5e-63
Identity = 116/122 (95.08%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 1   MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 60
           MRLYYGAKE+LKIQKFRR+VSYTGFYLF SVLSYAYTSNTTRAGYSRGDQFYASYPAGTE
Sbjct: 1   MRLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 60

Query: 61  LLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDG 120
           LLTDTTKLYKAALGNCFE+EEWGPIEFC+MAKHF+RQGKSPYAYHSQYMAHLLSHGQLDG
Sbjct: 61  LLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKSPYAYHSQYMAHLLSHGQLDG 120

Query: 121 SG 123
           SG
Sbjct: 121 SG 122

[Close]

BLAST of CsaV3_5G013870 vs. NCBI nr
Match: XP_008454751.1 (PREDICTED: uncharacterized protein LOC103495078 isoform X1 [Cucumis melo] >XP_016901660.1 PREDICTED: uncharacterized protein LOC103495078 isoform X1 [Cucumis melo])

HSP 1 Score: 246.9 bits (629), Expect = 3.6e-62
Identity = 118/122 (96.72%), Postives = 120/122 (98.36%), Query Frame = 0


Query: 1   MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 60
           MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAY SNTTRAGYSRGDQFYASY AGTE
Sbjct: 1   MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYASNTTRAGYSRGDQFYASYSAGTE 60

Query: 61  LLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDG 120
           LLTDT+KLYKAALGNCFELEEWGPIEFCIMAKHF+RQGKSPYAYHSQYMAHLLSHGQLDG
Sbjct: 61  LLTDTSKLYKAALGNCFELEEWGPIEFCIMAKHFERQGKSPYAYHSQYMAHLLSHGQLDG 120

Query: 121 SG 123
           SG
Sbjct: 121 SG 122

[Close]

BLAST of CsaV3_5G013870 vs. NCBI nr
Match: XP_022942452.1 (uncharacterized protein LOC111447487 [Cucurbita moschata] >XP_022942453.1 uncharacterized protein LOC111447487 [Cucurbita moschata] >XP_022942454.1 uncharacterized protein LOC111447487 [Cucurbita moschata] >XP_023534356.1 uncharacterized protein LOC111795941 [Cucurbita pepo subsp. pepo] >XP_023534363.1 uncharacterized protein LOC111795941 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 246.9 bits (629), Expect = 3.6e-62
Identity = 115/122 (94.26%), Postives = 120/122 (98.36%), Query Frame = 0


Query: 1   MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 60
           M LYYGAKE+LKIQKFRR+VSYTGFYLF SVLSYAYTSNTTRAGYSRGDQFYASYPAGTE
Sbjct: 1   MGLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 60

Query: 61  LLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDG 120
           LLTDTTKLYKAALGNCFE+EEWGPIEFC+MAKHF+RQGKSPYAYHSQYMAHLLSHGQLDG
Sbjct: 61  LLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKSPYAYHSQYMAHLLSHGQLDG 120

Query: 121 SG 123
           SG
Sbjct: 121 SG 122

[Close]

BLAST of CsaV3_5G013870 vs. NCBI nr
Match: XP_022150012.1 (uncharacterized protein LOC111018291 isoform X2 [Momordica charantia])

HSP 1 Score: 246.5 bits (628), Expect = 4.7e-62
Identity = 117/122 (95.90%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 1   MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 60
           MRLYYGAKEILKIQKFRRIVSYTGFYLF SVLSYAYTSNTTRAGYSRGDQFYASYPAGTE
Sbjct: 91  MRLYYGAKEILKIQKFRRIVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 150

Query: 61  LLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDG 120
           LLTDT KLYKAALGNCFE EEWGPIEFCIMAKHF+RQGKSPYAYH+QYMAHLLSHGQLDG
Sbjct: 151 LLTDTAKLYKAALGNCFESEEWGPIEFCIMAKHFERQGKSPYAYHAQYMAHLLSHGQLDG 210

Query: 121 SG 123
           SG
Sbjct: 211 SG 212

[Close]

BLAST of CsaV3_5G013870 vs. TAIR10
Match: AT1G14990.2 (unknown protein)

HSP 1 Score: 199.1 bits (505), Expect = 1.5e-51
Identity = 94/124 (75.81%), Postives = 103/124 (83.06%), Query Frame = 0


Query: 9   EILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKL 68
           E++KIQK RR VSY GFY F + L++ YT+NTTRAGYSRGDQFYASYPAGTELLTDT KL
Sbjct: 9   EVIKIQKLRRAVSYAGFYCFTAALTFFYTNNTTRAGYSRGDQFYASYPAGTELLTDTAKL 68

Query: 69  YKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHS----------QYMAHLLSHGQL 123
           YKAALGNC+E E+WGP+EFCIMAKHFDRQGKSPY YHS          QYMAHLLS GQL
Sbjct: 69  YKAALGNCYESEDWGPVEFCIMAKHFDRQGKSPYVYHSVSFHKSRILMQYMAHLLSQGQL 128

[Close]

BLAST of CsaV3_5G013870 vs. TrEMBL
Match: tr|A0A0A0KPE6|A0A0A0KPE6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G001030 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 8.7e-65
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 60
           MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTE
Sbjct: 1   MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 60

Query: 61  LLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDG 120
           LLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDG
Sbjct: 61  LLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDG 120

Query: 121 SG 123
           SG
Sbjct: 121 SG 122

[Close]

BLAST of CsaV3_5G013870 vs. TrEMBL
Match: tr|A0A1S3BZF5|A0A1S3BZF5_CUCME (uncharacterized protein LOC103495078 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495078 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.4e-62
Identity = 118/122 (96.72%), Postives = 120/122 (98.36%), Query Frame = 0


Query: 1   MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 60
           MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAY SNTTRAGYSRGDQFYASY AGTE
Sbjct: 1   MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYASNTTRAGYSRGDQFYASYSAGTE 60

Query: 61  LLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDG 120
           LLTDT+KLYKAALGNCFELEEWGPIEFCIMAKHF+RQGKSPYAYHSQYMAHLLSHGQLDG
Sbjct: 61  LLTDTSKLYKAALGNCFELEEWGPIEFCIMAKHFERQGKSPYAYHSQYMAHLLSHGQLDG 120

Query: 121 SG 123
           SG
Sbjct: 121 SG 122

[Close]

BLAST of CsaV3_5G013870 vs. TrEMBL
Match: tr|A0A2P4LU15|A0A2P4LU15_QUESU (F-box protein skip23 OS=Quercus suber OX=58331 GN=CFP56_39254 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 6.0e-58
Identity = 109/122 (89.34%), Postives = 117/122 (95.90%), Query Frame = 0


Query: 1   MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 60
           MRLY G KEILKIQKFRRIVSYTGFY FA+++SYAYTSNTTRAGYSR DQFYASYPAGTE
Sbjct: 252 MRLYDGVKEILKIQKFRRIVSYTGFYCFAALVSYAYTSNTTRAGYSRADQFYASYPAGTE 311

Query: 61  LLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDG 120
           LLTDT KLYKAALGNCFE+EEWGPIE+CIMAKHF+RQGKSPYAYH+QYMAHLLS+GQLDG
Sbjct: 312 LLTDTAKLYKAALGNCFEVEEWGPIEYCIMAKHFERQGKSPYAYHAQYMAHLLSNGQLDG 371

Query: 121 SG 123
           SG
Sbjct: 372 SG 373

[Close]

BLAST of CsaV3_5G013870 vs. TrEMBL
Match: tr|A0A067L0N5|A0A067L0N5_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_04698 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 7.9e-58
Identity = 110/122 (90.16%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 1   MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 60
           M LY G KEILKIQKFRRIVSYTGFY F +VLSYAYTSNTTRAGYSR DQFYASYPAGTE
Sbjct: 1   MMLYDGFKEILKIQKFRRIVSYTGFYCFVAVLSYAYTSNTTRAGYSRADQFYASYPAGTE 60

Query: 61  LLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDG 120
           LLTDT KLYKAA+GNCFE E+WGPIEFCIMAKHFDRQGKSPYAYH+QYMAHLLSHGQLDG
Sbjct: 61  LLTDTAKLYKAAVGNCFESEDWGPIEFCIMAKHFDRQGKSPYAYHAQYMAHLLSHGQLDG 120

Query: 121 SG 123
           SG
Sbjct: 121 SG 122

[Close]

BLAST of CsaV3_5G013870 vs. TrEMBL
Match: tr|A0A2C9UGI1|A0A2C9UGI1_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G128100 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 7.9e-58
Identity = 110/122 (90.16%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 1   MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 60
           M LY G KEILKIQKFRR+VSYTGFY F +VLSYAYTSNTTRAGYSR DQFYASYPAGTE
Sbjct: 1   MMLYDGFKEILKIQKFRRLVSYTGFYCFVAVLSYAYTSNTTRAGYSRADQFYASYPAGTE 60

Query: 61  LLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDG 120
           LLTDT KLYKAALGNCFE EEWGPIEFCIMAKHFDRQGKSPYAYH+QY+AHLLSHGQLDG
Sbjct: 61  LLTDTAKLYKAALGNCFESEEWGPIEFCIMAKHFDRQGKSPYAYHAQYVAHLLSHGQLDG 120

Query: 121 SG 123
           SG
Sbjct: 121 SG 122

The following BLAST results are available for this feature:

BLAST of CsaV3_5G013870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149132.1	1.3e-64	100.00	PREDICTED: uncharacterized protein LOC101204884 [Cucumis sativus] >KGN49556.1 hy...	[more]
XP_022976595.1	5.5e-63	95.08	uncharacterized protein LOC111476941 [Cucurbita maxima] >XP_022976600.1 uncharac...	[more]
XP_008454751.1	3.6e-62	96.72	PREDICTED: uncharacterized protein LOC103495078 isoform X1 [Cucumis melo] >XP_01...	[more]
XP_022942452.1	3.6e-62	94.26	uncharacterized protein LOC111447487 [Cucurbita moschata] >XP_022942453.1 unchar...	[more]
XP_022150012.1	4.7e-62	95.90	uncharacterized protein LOC111018291 isoform X2 [Momordica charantia]	[more]

BLAST of CsaV3_5G013870 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G14990.2	1.5e-51	75.81	unknown protein	[more]

BLAST of CsaV3_5G013870 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_5G013870 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KPE6\|A0A0A0KPE6_CUCSA	8.7e-65	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G001030 PE=4 SV=1	[more]
tr\|A0A1S3BZF5\|A0A1S3BZF5_CUCME	2.4e-62	96.72	uncharacterized protein LOC103495078 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A2P4LU15\|A0A2P4LU15_QUESU	6.0e-58	89.34	F-box protein skip23 OS=Quercus suber OX=58331 GN=CFP56_39254 PE=4 SV=1	[more]
tr\|A0A067L0N5\|A0A067L0N5_JATCU	7.9e-58	90.16	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_04698 PE=4 SV=1	[more]
tr\|A0A2C9UGI1\|A0A2C9UGI1_MANES	7.9e-58	90.16	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G128100 PE=4 SV=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G013870.1	CsaV3_5G013870.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36712	FAMILY NOT NAMED	coord: 1..122

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_5G013870	CSPI05G00060	Wild cucumber (PI 183967)	cpicucB286
CsaV3_5G013870	CmaCh04G000440	Cucurbita maxima (Rimu)	cmacucB0893
CsaV3_5G013870	CmoCh04G000410	Cucurbita moschata (Rifu)	cmocucB0890
CsaV3_5G013870	Cp4.1LG01g06280	Cucurbita pepo (Zucchini)	cpecucB0559
CsaV3_5G013870	CsGy5G010400	Cucumber (Gy14) v2	cgybcucB232
CsaV3_5G013870	Carg21996	Silver-seed gourd	carcucB0207
CsaV3_5G013870	Cla004510	Watermelon (97103) v1	cucwmB421
CsaV3_5G013870	MELO3C018308	Melon (DHL92) v3.5.1	cucmeB374
CsaV3_5G013870	ClCG07G006660	Watermelon (Charleston Gray)	cucwcgB423
CsaV3_5G013870	Lsi04G011610	Bottle gourd (USVL1VR-Ls)	cuclsiB388
CsaV3_5G013870	MELO3C018308.2	Melon (DHL92) v3.6.1	cucmedB364
CsaV3_5G013870	Bhi07G000244	Wax gourd	cucwgoB527

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_5G013870	Cucumber (Gy14) v1	cgycucB424
CsaV3_5G013870	Cucurbita pepo (Zucchini)	cpecucB0548
CsaV3_5G013870	Cucurbita pepo (Zucchini)	cpecucB0557
CsaV3_5G013870	Watermelon (97103) v2	cucwmbB408