CsaV3_4G012070.1 (mRNA) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTTTGATTCCATGATCTTGCACCTTTAGGCTTTAGTTATTAGATTCTAACTAGCCAAAGTTGTGAGATTGTTATTTGATATGTCATGAAATGATTGTTAGACGATTCAGTAATGGTACAGGATCAGCTAAAAATGCATGGAGATCTAATTCTTGAAGCAGTCAAGCGTCTATCAGAAGAAGTCCGTCTATCATTGGGGGGCAAATATAGAGAAGGAAATGGACAAGGTACTACAACGAGAAAACTCTATACAGAACTAAACCAACGGCGACCATTGGCTCTAGCAAAGTTCGAAGCTTGGAAAATGTGGCACGAAGATGGTCTCTCAATACAGAGAATTGCTGTAAGTATATTTTTTTTTCAACTTTTCGAAGTTTTTGAGAAAAAAAGGCTTATGAAGACGAACATAGCAACATGGCAATTTGTAAGCCTATTCACACATTGAACTTCACCCATTGAACATAGCAGCATGTATATATCCATGCTGCTTTTTATGGCATGAAAAAAGTTTTACTTCCAAACCAAAAACTATCAACGGTAGTAGTTATTGAAAATAAGCTAATTAAATTTGAACATGAGAGGAACTAGACTTAATGTTGAAAGGGATGCAAGCGACCAC ATGGTACAGGATCAGCTAAAAATGCATGGAGATCTAATTCTTGAAGCAGTCAAGCGTCTATCAGAAGAAGTCCGTCTATCATTGGGGGGCAAATATAGAGAAGGAAATGGACAAGGTACTACAACGAGAAAACTCTATACAGAACTAAACCAACGGCGACCATTGGCTCTAGCAAAGTTCGAAGCTTGGAAAATGTGGCACGAAGATGGTCTCTCAATACAGAGAATTGCTGTAAGTATATTTTTTTTTCAACTTTTCGAAGTTTTTGAGAAAAAAAGGCTTATGAAGACGAACATAGCAACATGGCAATTTGTAAGCCTATTCACACATTGA ATGGTACAGGATCAGCTAAAAATGCATGGAGATCTAATTCTTGAAGCAGTCAAGCGTCTATCAGAAGAAGTCCGTCTATCATTGGGGGGCAAATATAGAGAAGGAAATGGACAAGGTACTACAACGAGAAAACTCTATACAGAACTAAACCAACGGCGACCATTGGCTCTAGCAAAGTTCGAAGCTTGGAAAATGTGGCACGAAGATGGTCTCTCAATACAGAGAATTGCTGTAAGTATATTTTTTTTTCAACTTTTCGAAGTTTTTGAGAAAAAAAGGCTTATGAAGACGAACATAGCAACATGGCAATTTGTAAGCCTATTCACACATTGA MVQDQLKMHGDLILEAVKRLSEEVRLSLGGKYREGNGQGTTTRKLYTELNQRRPLALAKFEAWKMWHEDGLSIQRIAVSIFFFQLFEVFEKKRLMKTNIATWQFVSLFTH
BLAST of CsaV3_4G012070.1 vs. NCBI nr
Match: KGN53915.1 (hypothetical protein Csa_4G188670 [Cucumis sativus]) HSP 1 Score: 222.6 bits (566), Expect = 6.5e-55 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of CsaV3_4G012070.1 vs. NCBI nr
Match: KGN53916.1 (hypothetical protein Csa_4G188732 [Cucumis sativus]) HSP 1 Score: 125.9 bits (315), Expect = 8.3e-26 Identity = 64/76 (84.21%), Postives = 68/76 (89.47%), Query Frame = 0
BLAST of CsaV3_4G012070.1 vs. NCBI nr
Match: XP_011653463.1 (PREDICTED: ATP-dependent DNA helicase Q-like SIM [Cucumis sativus]) HSP 1 Score: 125.9 bits (315), Expect = 8.3e-26 Identity = 64/76 (84.21%), Postives = 68/76 (89.47%), Query Frame = 0
BLAST of CsaV3_4G012070.1 vs. NCBI nr
Match: XP_008442015.1 (PREDICTED: ATP-dependent DNA helicase RecQ-like isoform X1 [Cucumis melo]) HSP 1 Score: 125.6 bits (314), Expect = 1.1e-25 Identity = 64/76 (84.21%), Postives = 68/76 (89.47%), Query Frame = 0
BLAST of CsaV3_4G012070.1 vs. NCBI nr
Match: XP_008442016.1 (PREDICTED: ATP-dependent DNA helicase RecQ-like isoform X2 [Cucumis melo]) HSP 1 Score: 125.6 bits (314), Expect = 1.1e-25 Identity = 64/76 (84.21%), Postives = 68/76 (89.47%), Query Frame = 0
BLAST of CsaV3_4G012070.1 vs. TrEMBL
Match: tr|A0A0A0KWB6|A0A0A0KWB6_CUCSA (ATP-dependent DNA helicase OS=Cucumis sativus OX=3659 GN=Csa_4G188670 PE=3 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 4.3e-55 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of CsaV3_4G012070.1 vs. TrEMBL
Match: tr|A0A0A0L1A4|A0A0A0L1A4_CUCSA (ATP-dependent DNA helicase OS=Cucumis sativus OX=3659 GN=Csa_4G188732 PE=3 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 5.5e-26 Identity = 64/76 (84.21%), Postives = 68/76 (89.47%), Query Frame = 0
BLAST of CsaV3_4G012070.1 vs. TrEMBL
Match: tr|A0A1S3B4Q2|A0A1S3B4Q2_CUCME (ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103486004 PE=3 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 7.2e-26 Identity = 64/76 (84.21%), Postives = 68/76 (89.47%), Query Frame = 0
BLAST of CsaV3_4G012070.1 vs. TrEMBL
Match: tr|A0A1S3B4R4|A0A1S3B4R4_CUCME (ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103486004 PE=3 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 7.2e-26 Identity = 64/76 (84.21%), Postives = 68/76 (89.47%), Query Frame = 0
BLAST of CsaV3_4G012070.1 vs. TrEMBL
Match: tr|A0A1S3B4Q5|A0A1S3B4Q5_CUCME (ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103485999 PE=3 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 9.7e-15 Identity = 47/75 (62.67%), Postives = 53/75 (70.67%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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