CsaV3_2G013670 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTTACATAGCTTCGTGGGATGAATTCGTCGAGCGTTCTGTCCAATTGTTCCGTTCCGATCCCACCTCCGTAAGTTTTTTCTTCCAAATTCCATTCCCTAGACATTGTTTCCCGTTTGAATTCTCAGAAATTAGATCGCATTGTTGTATTATCATCCCTCAATTGCATAATGAATTGTGAAAGACGTTCTAATCCATCTATCTGCCTAATTTGAAAACACTGTCCACGATTACGAACTTACAGTCTACTCATATGTTCCGTTTATCGCATCGTTCGTTGTTTTTTCAATTCATTCTAACTGCGATCGCTGTTTTCTTTTCCAATTCCAATGGGGATTTAGACGAGGTATAACATAAAGTATCGACACTGCGATGGGAAACTGGTTCTTAAAGTCACCGATAACCGTGAGGTAAAGAATTTTGTGTTGGGATTTTGATTAATATCATGTGTTTTTTCTGGTTAGTGATCAGGATGGGAATATTGATTATTGATTTTTAACTGTATGCTTGGTTCTGTTTTTCATCTGGCAAATTCTTGGCCTTATAAATGTTAAACGCCAATGTATGAAGAAGCGTGCTGAGTCTTTAATGCACGTGTATCTAAGTAGACTTGTGATCTGCTTATCCACTAAATTAACCTGTAAAGTTTCAAGTAGACCATAGTTGAGTTCGACATATGCCATTAAACGATGCCTGATGCCACAACTTTTCATGTGACCATGGTTAGAAATGGATTTTGACGTGCCTCTTTCTAAGGCATGATATAATCACCAAAAAGAAAGGACATTGTCTTTGAGATGGTTGAAGTAGAAGAGACAATTTTAAAGTAGCACCAACTGTAGTTTAGTTAGTCTTCATTGTGCACTAGCTGGTGCTGGTCAGTGGGGTGAGATAGTGTTCCGTTGGTGTTCTCAGGGAGGTCTTTTGGAGAGTTTGCTTCAACACGAAAATGAAGACTTCGAGAACAAATATTGGATCTTCCTCTTCCTCTGATCCATCACCCTTTCTTGCTTGTATTACAGAGAAAAAGATCAGATTCTGCCTCTGATCCGTTTTCTCCTGAGGGTTTCCTTTCGAAATTGAGGAAGAAATGCCTTTACCAATCCTTTCATGAAGAGATCAGCAATTGATCTTTACTTCTCATGGTTAACAATTAGCAATTTAGAAATCAGGTCTTAGAACTAGCCACTATTCCAAAGACTCCTTTGGGGTCTTATATCTTTCATAGGAAGATTAGGATGTGCGAATGTTTCTTTGTCATGTGGAAAAGAAAAAACTAATTAGTGCAAAATGCATAGATACAAGATATCAACTGGGAATCTGATGGGTGATATTCATATGTTTATGCTTGCTTGTATGGAGAATTTTCTGTATATCTGCACATATTGAAACAAACAATCTGGAATTTAACCAAAACTGACTTAAGGGCATATGCCAAATCATAACAATATCATTATCGACATAGTAGTGGCTATCTTTCTAGATGTGTTAGGTATACTAATTTTCTCTTGTTTTTTTCTTCCTTTTGTTTTCTCCCTGTTTTCCAGTGTCTTAAGTTCAAGACTGACCAGGCACAGGATGCTAAGAAGATGGAAAAGCTCAACAACATATTCTTCACTCTGATGGCCCGGGGCCCTGATGGTATTTTGCTTCGAGTTTATTTTGATTAATGAAATATCTGAATACTCTGTTGAATAATAATTAACTACTTGCTGGCGTCATGATTTTGTACTAAAATTTTGTTACAATTTGAATTCTTGTTGTCCATACAAATGAATGGAATGGAAAACTATGTATTCTCTAAATGCATGAAAGTTCCATATCCCTAAATTGCAGCTTGCAGCAACTTGTAAACTAGTTCCATGATAATTTCAGTACTTGAAGGATGAGTTTGCTTCCCTTCTGAATGCTGTTTGAGCCCATGAAAGAATATAGGCCGCTGCTTGCTAACTTTGTTATAGGCCAAAATGGTTCATGGCCTGCCTGGAGTTCTCACACAACCTGTGATCGATATATCCAATCCTAGTATCCATCATCCATGGAACATCATTCTTAATCTATATAATTTTTGTTTACCCAGTCATTCAGTAAATCTAATGTGAACTCAGTTCCATTAATTATGTGCAGTGCCTGGACTAATAATTTCCATTCTTAATCTATATAATTTTTGTTTACCCAGCCATTCGTAAATCTAAGCCTGCTTGGACTTATCTCTTATGTGCAGTGGATATATCAGAAGTGACAGGCAAGGACCAGGTTGATGCACAGCCAACCAAGAAAGGAAGGGGGAGGAAGCAATGA ATGGTTTACATAGCTTCGTGGGATGAATTCGTCGAGCGTTCTGTCCAATTGTTCCGTTCCGATCCCACCTCCACGAGGTATAACATAAAGTATCGACACTGCGATGGGAAACTGGTTCTTAAAGTCACCGATAACCGTGAGTGTCTTAAGTTCAAGACTGACCAGGCACAGGATGCTAAGAAGATGGAAAAGCTCAACAACATATTCTTCACTCTGATGGCCCGGGGCCCTGATGTGGATATATCAGAAGTGACAGGCAAGGACCAGGTTGATGCACAGCCAACCAAGAAAGGAAGGGGGAGGAAGCAATGA ATGGTTTACATAGCTTCGTGGGATGAATTCGTCGAGCGTTCTGTCCAATTGTTCCGTTCCGATCCCACCTCCACGAGGTATAACATAAAGTATCGACACTGCGATGGGAAACTGGTTCTTAAAGTCACCGATAACCGTGAGTGTCTTAAGTTCAAGACTGACCAGGCACAGGATGCTAAGAAGATGGAAAAGCTCAACAACATATTCTTCACTCTGATGGCCCGGGGCCCTGATGTGGATATATCAGAAGTGACAGGCAAGGACCAGGTTGATGCACAGCCAACCAAGAAAGGAAGGGGGAGGAAGCAATGA MVYIASWDEFVERSVQLFRSDPTSTRYNIKYRHCDGKLVLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRGRKQ
BLAST of CsaV3_2G013670 vs. NCBI nr
Match: XP_004154105.1 (PREDICTED: signal recognition particle 9 kDa protein [Cucumis sativus] >XP_004154106.1 PREDICTED: signal recognition particle 9 kDa protein [Cucumis sativus] >XP_008449345.1 PREDICTED: signal recognition particle 9 kDa protein [Cucumis melo] >XP_008449346.1 PREDICTED: signal recognition particle 9 kDa protein [Cucumis melo] >KGN61688.1 hypothetical protein Csa_2G224280 [Cucumis sativus]) HSP 1 Score: 212.6 bits (540), Expect = 6.3e-52 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of CsaV3_2G013670 vs. NCBI nr
Match: XP_022963515.1 (signal recognition particle 9 kDa protein [Cucurbita moschata] >XP_022963516.1 signal recognition particle 9 kDa protein [Cucurbita moschata]) HSP 1 Score: 210.3 bits (534), Expect = 3.1e-51 Identity = 101/103 (98.06%), Postives = 102/103 (99.03%), Query Frame = 0
BLAST of CsaV3_2G013670 vs. NCBI nr
Match: XP_022967500.1 (signal recognition particle 9 kDa protein-like [Cucurbita maxima] >XP_022967501.1 signal recognition particle 9 kDa protein-like [Cucurbita maxima] >XP_022967502.1 signal recognition particle 9 kDa protein-like [Cucurbita maxima] >XP_022967503.1 signal recognition particle 9 kDa protein-like [Cucurbita maxima]) HSP 1 Score: 208.4 bits (529), Expect = 1.2e-50 Identity = 100/103 (97.09%), Postives = 102/103 (99.03%), Query Frame = 0
BLAST of CsaV3_2G013670 vs. NCBI nr
Match: XP_022146059.1 (signal recognition particle 9 kDa protein isoform X1 [Momordica charantia] >XP_022146061.1 signal recognition particle 9 kDa protein isoform X1 [Momordica charantia]) HSP 1 Score: 207.6 bits (527), Expect = 2.0e-50 Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of CsaV3_2G013670 vs. NCBI nr
Match: XP_022930934.1 (signal recognition particle 9 kDa protein-like [Cucurbita moschata] >XP_022930935.1 signal recognition particle 9 kDa protein-like [Cucurbita moschata] >XP_022995181.1 signal recognition particle 9 kDa protein [Cucurbita maxima] >XP_022995182.1 signal recognition particle 9 kDa protein [Cucurbita maxima] >XP_023533640.1 signal recognition particle 9 kDa protein [Cucurbita pepo subsp. pepo]) HSP 1 Score: 205.7 bits (522), Expect = 7.7e-50 Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0
BLAST of CsaV3_2G013670 vs. TAIR10
Match: AT3G49100.1 (Signal recognition particle, SRP9/SRP14 subunit) HSP 1 Score: 192.2 bits (487), Expect = 1.6e-49 Identity = 90/103 (87.38%), Postives = 99/103 (96.12%), Query Frame = 0
BLAST of CsaV3_2G013670 vs. Swiss-Prot
Match: sp|Q9SMU7|SRP09_ARATH (Signal recognition particle 9 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SRP9 PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.9e-48 Identity = 90/103 (87.38%), Postives = 99/103 (96.12%), Query Frame = 0
BLAST of CsaV3_2G013670 vs. Swiss-Prot
Match: sp|O04438|SRP09_MAIZE (Signal recognition particle 9 kDa protein OS=Zea mays OX=4577 GN=SRP9 PE=3 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 5.6e-44 Identity = 83/103 (80.58%), Postives = 93/103 (90.29%), Query Frame = 0
BLAST of CsaV3_2G013670 vs. Swiss-Prot
Match: sp|Q55GL2|SRP09_DICDI (Signal recognition particle 9 kDa protein OS=Dictyostelium discoideum OX=44689 GN=srp9 PE=3 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 6.5e-16 Identity = 35/71 (49.30%), Postives = 56/71 (78.87%), Query Frame = 0
BLAST of CsaV3_2G013670 vs. Swiss-Prot
Match: sp|P21262|SRP09_CANLF (Signal recognition particle 9 kDa protein OS=Canis lupus familiaris OX=9615 GN=SRP9 PE=1 SV=2) HSP 1 Score: 73.6 bits (179), Expect = 1.5e-12 Identity = 33/73 (45.21%), Postives = 47/73 (64.38%), Query Frame = 0
BLAST of CsaV3_2G013670 vs. Swiss-Prot
Match: sp|P49458|SRP09_HUMAN (Signal recognition particle 9 kDa protein OS=Homo sapiens OX=9606 GN=SRP9 PE=1 SV=2) HSP 1 Score: 73.6 bits (179), Expect = 1.5e-12 Identity = 33/68 (48.53%), Postives = 46/68 (67.65%), Query Frame = 0
BLAST of CsaV3_2G013670 vs. TrEMBL
Match: tr|A0A1S3BLU0|A0A1S3BLU0_CUCME (Signal recognition particle 9 kDa protein OS=Cucumis melo OX=3656 GN=LOC103491251 PE=3 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 4.2e-52 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of CsaV3_2G013670 vs. TrEMBL
Match: tr|A0A0A0LIQ2|A0A0A0LIQ2_CUCSA (Signal recognition particle 9 kDa protein OS=Cucumis sativus OX=3659 GN=Csa_2G224280 PE=3 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 4.2e-52 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of CsaV3_2G013670 vs. TrEMBL
Match: tr|A0A2P4KSP1|A0A2P4KSP1_QUESU (Signal recognition particle 9 kDa protein OS=Quercus suber OX=58331 GN=CFP56_37574 PE=3 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 3.1e-47 Identity = 92/103 (89.32%), Postives = 99/103 (96.12%), Query Frame = 0
BLAST of CsaV3_2G013670 vs. TrEMBL
Match: tr|A0A2N9I406|A0A2N9I406_FAGSY (Signal recognition particle 9 kDa protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48678 PE=3 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 4.0e-47 Identity = 92/103 (89.32%), Postives = 98/103 (95.15%), Query Frame = 0
BLAST of CsaV3_2G013670 vs. TrEMBL
Match: tr|A0A2P6PVJ5|A0A2P6PVJ5_ROSCH (Signal recognition particle 9 kDa protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0289311 PE=3 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 4.0e-47 Identity = 93/103 (90.29%), Postives = 99/103 (96.12%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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