CsaV3_2G010270.1 (mRNA) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTAAATTCAAAAGCCAAAAACATAAATCACATCTTTCAAGAAACAAACAAATAAAAAGTAGCTGTTATTAACCTCATTTTATTCCAATCATTCCCATTCTAACGTCTCTCAAATTTTAAATATGAACATAGAAAAGAAAAATGACCGTTGCCCCCTAAACCTTCAAATCCCTATAAACTTCCATTTCCCCTTCTCCTTCCTTCACATCCTCAATCTCATCATCTCCATCTCTTCTTCAATCTAAAAATCCCCCAAAATTTCCTTCTCTCCCCCTCAACAAATGGGTCTTTCACCTTCATCTTCAACCTCAATTTCTAGCTCACACTACAACATCCACAAGCTCTTCCTCCTCTGTAACTACATCCTCCTCGGCGCTGCCTCCAGCTGCATTTTCCTCACCCTCTCCCTCCGTCTTCTCCCTTCCGTTTGCGGCTTCTTCATCATCTTCCTCCACGCCTTCACCATTGCCGGCGCCGTCTCTGGCTGCGCCATGGCATCCGCCTCTACCGGCCGCTGGTTCGGCGTCCACATGGTCTTCACCGTCCTTACCGCCATCTTCCAAGGCTCCGTCACCGTCCTCGTCTTCACTAGAACCGCCGACTTCCTGGGTGAATTGAAATCATATGTCCGAGAGGAAGATGGATCGGTGATTTTGAAGTTGGGCGGCGGATTGAGTGGATTGATCTTTTGTTTGGAGTGGGTTGTTCTTGTTCTTGCGTTTTGTTTGAAGTATTATATGTATGTCGAAGGGAATGGAAATGGTGAGGGTTTGAAGAGAAGTGCTAAGGTTCAGCAATTTGAAGATTCAACTTGGGCAGCACCATTTCCTGTTTAGAAACACAAATCAACACACATTTTTATTTCTCATTCTTAATTTAAACTTTGTTTGATGATTCAATTTGTGAGTCATATTCATATATGTATTCTTTCTTATTGATTTTTATATGTTTGTTAATGTATGTTTCGGAATTAAATTATGGCTTCTATATTGAAGGGGTTATTCATTCAAATAATATAATATACTATACATTACTTTTGTGTCTT ATGGGTCTTTCACCTTCATCTTCAACCTCAATTTCTAGCTCACACTACAACATCCACAAGCTCTTCCTCCTCTGTAACTACATCCTCCTCGGCGCTGCCTCCAGCTGCATTTTCCTCACCCTCTCCCTCCGTCTTCTCCCTTCCGTTTGCGGCTTCTTCATCATCTTCCTCCACGCCTTCACCATTGCCGGCGCCGTCTCTGGCTGCGCCATGGCATCCGCCTCTACCGGCCGCTGGTTCGGCGTCCACATGGTCTTCACCGTCCTTACCGCCATCTTCCAAGGCTCCGTCACCGTCCTCGTCTTCACTAGAACCGCCGACTTCCTGGGTGAATTGAAATCATATGTCCGAGAGGAAGATGGATCGGTGATTTTGAAGTTGGGCGGCGGATTGAGTGGATTGATCTTTTGTTTGGAGTGGGTTGTTCTTGTTCTTGCGTTTTGTTTGAAGTATTATATGTATGTCGAAGGGAATGGAAATGGTGAGGGTTTGAAGAGAAGTGCTAAGGTTCAGCAATTTGAAGATTCAACTTGGGCAGCACCATTTCCTGTTTAG ATGGGTCTTTCACCTTCATCTTCAACCTCAATTTCTAGCTCACACTACAACATCCACAAGCTCTTCCTCCTCTGTAACTACATCCTCCTCGGCGCTGCCTCCAGCTGCATTTTCCTCACCCTCTCCCTCCGTCTTCTCCCTTCCGTTTGCGGCTTCTTCATCATCTTCCTCCACGCCTTCACCATTGCCGGCGCCGTCTCTGGCTGCGCCATGGCATCCGCCTCTACCGGCCGCTGGTTCGGCGTCCACATGGTCTTCACCGTCCTTACCGCCATCTTCCAAGGCTCCGTCACCGTCCTCGTCTTCACTAGAACCGCCGACTTCCTGGGTGAATTGAAATCATATGTCCGAGAGGAAGATGGATCGGTGATTTTGAAGTTGGGCGGCGGATTGAGTGGATTGATCTTTTGTTTGGAGTGGGTTGTTCTTGTTCTTGCGTTTTGTTTGAAGTATTATATGTATGTCGAAGGGAATGGAAATGGTGAGGGTTTGAAGAGAAGTGCTAAGGTTCAGCAATTTGAAGATTCAACTTGGGCAGCACCATTTCCTGTTTAG MGLSPSSSTSISSSHYNIHKLFLLCNYILLGAASSCIFLTLSLRLLPSVCGFFIIFLHAFTIAGAVSGCAMASASTGRWFGVHMVFTVLTAIFQGSVTVLVFTRTADFLGELKSYVREEDGSVILKLGGGLSGLIFCLEWVVLVLAFCLKYYMYVEGNGNGEGLKRSAKVQQFEDSTWAAPFPV
BLAST of CsaV3_2G010270.1 vs. NCBI nr
Match: XP_004138889.1 (PREDICTED: uncharacterized protein LOC101217347 [Cucumis sativus] >KGN61330.1 hypothetical protein Csa_2G083760 [Cucumis sativus]) HSP 1 Score: 360.5 bits (924), Expect = 3.3e-96 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of CsaV3_2G010270.1 vs. NCBI nr
Match: XP_008441816.1 (PREDICTED: uncharacterized protein LOC103485869 [Cucumis melo]) HSP 1 Score: 350.9 bits (899), Expect = 2.6e-93 Identity = 180/185 (97.30%), Postives = 182/185 (98.38%), Query Frame = 0
BLAST of CsaV3_2G010270.1 vs. NCBI nr
Match: XP_022996789.1 (uncharacterized protein LOC111491920 [Cucurbita maxima]) HSP 1 Score: 327.4 bits (838), Expect = 3.1e-86 Identity = 163/184 (88.59%), Postives = 175/184 (95.11%), Query Frame = 0
BLAST of CsaV3_2G010270.1 vs. NCBI nr
Match: XP_022933163.1 (uncharacterized protein LOC111440012 [Cucurbita moschata]) HSP 1 Score: 325.5 bits (833), Expect = 1.2e-85 Identity = 163/184 (88.59%), Postives = 175/184 (95.11%), Query Frame = 0
BLAST of CsaV3_2G010270.1 vs. NCBI nr
Match: XP_022965972.1 (uncharacterized protein LOC111465691 [Cucurbita maxima]) HSP 1 Score: 318.2 bits (814), Expect = 1.9e-83 Identity = 170/186 (91.40%), Postives = 175/186 (94.09%), Query Frame = 0
BLAST of CsaV3_2G010270.1 vs. TAIR10
Match: AT5G16250.1 (unknown protein) HSP 1 Score: 231.1 bits (588), Expect = 5.5e-61 Identity = 121/180 (67.22%), Postives = 141/180 (78.33%), Query Frame = 0
BLAST of CsaV3_2G010270.1 vs. TAIR10
Match: AT3G02640.1 (unknown protein) HSP 1 Score: 229.6 bits (584), Expect = 1.6e-60 Identity = 119/182 (65.38%), Postives = 140/182 (76.92%), Query Frame = 0
BLAST of CsaV3_2G010270.1 vs. TAIR10
Match: AT5G36800.1 (unknown protein) HSP 1 Score: 182.2 bits (461), Expect = 2.9e-46 Identity = 100/151 (66.23%), Postives = 119/151 (78.81%), Query Frame = 0
BLAST of CsaV3_2G010270.1 vs. TAIR10
Match: AT5G36710.1 (unknown protein) HSP 1 Score: 182.2 bits (461), Expect = 2.9e-46 Identity = 100/151 (66.23%), Postives = 119/151 (78.81%), Query Frame = 0
BLAST of CsaV3_2G010270.1 vs. TrEMBL
Match: tr|A0A0A0LHB3|A0A0A0LHB3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G083760 PE=4 SV=1) HSP 1 Score: 360.5 bits (924), Expect = 2.2e-96 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of CsaV3_2G010270.1 vs. TrEMBL
Match: tr|A0A1S3B526|A0A1S3B526_CUCME (uncharacterized protein LOC103485869 OS=Cucumis melo OX=3656 GN=LOC103485869 PE=4 SV=1) HSP 1 Score: 350.9 bits (899), Expect = 1.7e-93 Identity = 180/185 (97.30%), Postives = 182/185 (98.38%), Query Frame = 0
BLAST of CsaV3_2G010270.1 vs. TrEMBL
Match: tr|D7ST03|D7ST03_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0499g00020 PE=4 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 5.3e-66 Identity = 137/189 (72.49%), Postives = 156/189 (82.54%), Query Frame = 0
BLAST of CsaV3_2G010270.1 vs. TrEMBL
Match: tr|A0A200Q3X1|A0A200Q3X1_9MAGN (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_8895g23 PE=4 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 1.3e-64 Identity = 133/186 (71.51%), Postives = 155/186 (83.33%), Query Frame = 0
BLAST of CsaV3_2G010270.1 vs. TrEMBL
Match: tr|A0A2K1YW08|A0A2K1YW08_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G179300v3 PE=4 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 1.3e-64 Identity = 132/183 (72.13%), Postives = 150/183 (81.97%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
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