CsaV3_2G007440 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACAACTCATACTCATATACACCATAGGGGAGCCTCACCCATTCCTCTATAAATAATCTCTCCACTATCTTCTCTCATAGGCTTCAAAATCCACAACCAAAGTCATGATCAAGAGTTCTTGAAAGAGGTTAGAGGTTCGAATACTCATTGCATCTTGAGAAAATGAGTCTTTTGGAGATTGCTGGCATTGGAGGGCGTCGGTGGGAATGTCACTATGAGAAGCTAAATAGTGGAGGTAGTAATAGAGTGGTTGTAATGCGTAGACGTCGATGGGTTAAGAAGATGTTAAAGAGAGGAATGAAGGGTTTTCGATTGTATCGGTTTACGAGATTGAAGAGTAGTTTTGGTTTGAAGGTATCGTTTTTGATGTCGTTGTCGAGAAGAATTAGAGAGATTGTGAGTAGAATGAAGGTTGTTGAAGATGTATGCCCTAATATCATCTTCTCTACTCAATGGGGACTTCCTGTTCTATCTTATATTTGATTTTTCTTGTCCTAAGTGTTTGTTTAATTTTGTTGCTTTGACTATAGCTCACATGTGTTTCATTAATGAATGGATGGATAATTATTGTTGTTCATATAACTTTTTATGGTTTCTATATGTAATGTATAATATGGATTATTGAAGGACTGTTTGTGTACTAATTCTTTCCTTCATTCTCTTTAGTTTGTTCTACAAAATTCTTTCATCTTACCAACTTTTTCATTGTTTTTGGGATCTTAATGTATAAATGAGAAAGTTATTAGGATTCAAATTAGCTTAGAATTTAGTCTCTCAAAGTTAT ATGAGTCTTTTGGAGATTGCTGGCATTGGAGGGCGTCGGTGGGAATGTCACTATGAGAAGCTAAATAGTGGAGGTAGTAATAGAGTGGTTGTAATGCGTAGACGTCGATGGGTTAAGAAGATGTTAAAGAGAGGAATGAAGGGTTTTCGATTGTATCGGTTTACGAGATTGAAGAGTAGTTTTGGTTTGAAGGTATCGTTTTTGATGTCGTTGTCGAGAAGAATTAGAGAGATTGTGAGTAGAATGAAGGTTGTTGAAGATGTATGCCCTAATATCATCTTCTCTACTCAATGGGGACTTCCTGTTCTATCTTATATTTGA ATGAGTCTTTTGGAGATTGCTGGCATTGGAGGGCGTCGGTGGGAATGTCACTATGAGAAGCTAAATAGTGGAGGTAGTAATAGAGTGGTTGTAATGCGTAGACGTCGATGGGTTAAGAAGATGTTAAAGAGAGGAATGAAGGGTTTTCGATTGTATCGGTTTACGAGATTGAAGAGTAGTTTTGGTTTGAAGGTATCGTTTTTGATGTCGTTGTCGAGAAGAATTAGAGAGATTGTGAGTAGAATGAAGGTTGTTGAAGATGTATGCCCTAATATCATCTTCTCTACTCAATGGGGACTTCCTGTTCTATCTTATATTTGA MSLLEIAGIGGRRWECHYEKLNSGGSNRVVVMRRRRWVKKMLKRGMKGFRLYRFTRLKSSFGLKVSFLMSLSRRIREIVSRMKVVEDVCPNIIFSTQWGLPVLSYI
BLAST of CsaV3_2G007440 vs. NCBI nr
Match: KGN61039.1 (hypothetical protein Csa_2G035390 [Cucumis sativus]) HSP 1 Score: 213.4 bits (542), Expect = 3.8e-52 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of CsaV3_2G007440 vs. NCBI nr
Match: EOY11805.1 (Uncharacterized protein TCM_026865 [Theobroma cacao]) HSP 1 Score: 71.6 bits (174), Expect = 1.8e-09 Identity = 44/97 (45.36%), Postives = 57/97 (58.76%), Query Frame = 0
BLAST of CsaV3_2G007440 vs. NCBI nr
Match: XP_009796114.1 (PREDICTED: uncharacterized protein LOC104242730 [Nicotiana sylvestris] >XP_009796115.1 PREDICTED: uncharacterized protein LOC104242730 [Nicotiana sylvestris]) HSP 1 Score: 64.7 bits (156), Expect = 2.2e-07 Identity = 43/103 (41.75%), Postives = 55/103 (53.40%), Query Frame = 0
BLAST of CsaV3_2G007440 vs. NCBI nr
Match: XP_015874776.1 (uncharacterized protein LOC107411665 [Ziziphus jujuba]) HSP 1 Score: 64.7 bits (156), Expect = 2.2e-07 Identity = 48/93 (51.61%), Postives = 58/93 (62.37%), Query Frame = 0
BLAST of CsaV3_2G007440 vs. NCBI nr
Match: OAY43889.1 (hypothetical protein MANES_08G106000 [Manihot esculenta]) HSP 1 Score: 63.9 bits (154), Expect = 3.7e-07 Identity = 48/101 (47.52%), Postives = 61/101 (60.40%), Query Frame = 0
BLAST of CsaV3_2G007440 vs. TrEMBL
Match: tr|A0A0A0LJ29|A0A0A0LJ29_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035390 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 2.5e-52 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of CsaV3_2G007440 vs. TrEMBL
Match: tr|A0A061F3B0|A0A061F3B0_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_026865 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.2e-09 Identity = 44/97 (45.36%), Postives = 57/97 (58.76%), Query Frame = 0
BLAST of CsaV3_2G007440 vs. TrEMBL
Match: tr|A0A1U7YA37|A0A1U7YA37_NICSY (uncharacterized protein LOC104242730 OS=Nicotiana sylvestris OX=4096 GN=LOC104242730 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.4e-07 Identity = 43/103 (41.75%), Postives = 55/103 (53.40%), Query Frame = 0
BLAST of CsaV3_2G007440 vs. TrEMBL
Match: tr|A0A218WHP1|A0A218WHP1_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr018239 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.5e-07 Identity = 43/105 (40.95%), Postives = 56/105 (53.33%), Query Frame = 0
BLAST of CsaV3_2G007440 vs. TrEMBL
Match: tr|A0A2C9VF51|A0A2C9VF51_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G106000 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.5e-07 Identity = 48/101 (47.52%), Postives = 61/101 (60.40%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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