CsaV3_2G005010.1 (mRNA) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCATACCCTCTACTGCCCAATTCGATGGTCCTCCGGTGCTCGACACCGAAGGCCGACCTCTGCAGCGCGATGTCGAGTATTTCATCAAGCCTGCCATCACCGATGTTGCTGGCAATCTTACCTTAATTACCCGAAAAGGCGATCAGTGCCCATTTTACGTTGGGCAAGTACCACTTCTTTCACAAGAAATAGGTATGTATTAAATCTGTTAGAGTGTTGATATACAACTATTAAATGTGTACCTACACTTCACTCACTATTTAAGCAGATAGATTATGATATATTGAATTCTTAACAATAGGTTTCGGGGTCACCCTCACACCTTACCTAGAGGGTGACGATACAATCAGAGAAGGCAGAGATTTGAAGTTCGTGTTTCAAGCGTTCACCATTTGCATAACGGGGACTCAATGGAAAGTGGGGGAGGAAGATCCAAAGAGCGGAAGGAGGTTTGTGAAGCTCGGAAACGACAACACTGCCACCGGATACTTTAGAATAGACAAGAGCAACCTCGGAGTTTATAATATAGGATGGTGTCCCTCAGATGTGCCCTTTAAAGGGAGGCCAAGGTGTGGAAGTGCAGGAATTTTGATTGAGAAAGGTGTGAGGTTTTTGGCTTTGGATGGACCAGCATTTCCTTTTGAGTTTGTGAGAGTTGATACTGGAGAAGAGCTTGGTTCTATCCTGAAAGAGAAAAAATAA ATGGCCATACCCTCTACTGCCCAATTCGATGGTCCTCCGGTGCTCGACACCGAAGGCCGACCTCTGCAGCGCGATGTCGAGTATTTCATCAAGCCTGCCATCACCGATGTTGCTGGCAATCTTACCTTAATTACCCGAAAAGGCGATCAGTGCCCATTTTACGTTGGGCAAGTACCACTTCTTTCACAAGAAATAGGTTTCGGGGTCACCCTCACACCTTACCTAGAGGGTGACGATACAATCAGAGAAGGCAGAGATTTGAAGTTCGTGTTTCAAGCGTTCACCATTTGCATAACGGGGACTCAATGGAAAGTGGGGGAGGAAGATCCAAAGAGCGGAAGGAGGTTTGTGAAGCTCGGAAACGACAACACTGCCACCGGATACTTTAGAATAGACAAGAGCAACCTCGGAGTTTATAATATAGGATGGTGTCCCTCAGATGTGCCCTTTAAAGGGAGGCCAAGGTGTGGAAGTGCAGGAATTTTGATTGAGAAAGGTGTGAGGTTTTTGGCTTTGGATGGACCAGCATTTCCTTTTGAGTTTGTGAGAGTTGATACTGGAGAAGAGCTTGGTTCTATCCTGAAAGAGAAAAAATAA ATGGCCATACCCTCTACTGCCCAATTCGATGGTCCTCCGGTGCTCGACACCGAAGGCCGACCTCTGCAGCGCGATGTCGAGTATTTCATCAAGCCTGCCATCACCGATGTTGCTGGCAATCTTACCTTAATTACCCGAAAAGGCGATCAGTGCCCATTTTACGTTGGGCAAGTACCACTTCTTTCACAAGAAATAGGTTTCGGGGTCACCCTCACACCTTACCTAGAGGGTGACGATACAATCAGAGAAGGCAGAGATTTGAAGTTCGTGTTTCAAGCGTTCACCATTTGCATAACGGGGACTCAATGGAAAGTGGGGGAGGAAGATCCAAAGAGCGGAAGGAGGTTTGTGAAGCTCGGAAACGACAACACTGCCACCGGATACTTTAGAATAGACAAGAGCAACCTCGGAGTTTATAATATAGGATGGTGTCCCTCAGATGTGCCCTTTAAAGGGAGGCCAAGGTGTGGAAGTGCAGGAATTTTGATTGAGAAAGGTGTGAGGTTTTTGGCTTTGGATGGACCAGCATTTCCTTTTGAGTTTGTGAGAGTTGATACTGGAGAAGAGCTTGGTTCTATCCTGAAAGAGAAAAAATAA MAIPSTAQFDGPPVLDTEGRPLQRDVEYFIKPAITDVAGNLTLITRKGDQCPFYVGQVPLLSQEIGFGVTLTPYLEGDDTIREGRDLKFVFQAFTICITGTQWKVGEEDPKSGRRFVKLGNDNTATGYFRIDKSNLGVYNIGWCPSDVPFKGRPRCGSAGILIEKGVRFLALDGPAFPFEFVRVDTGEELGSILKEKK
BLAST of CsaV3_2G005010.1 vs. NCBI nr
Match: XP_004139193.1 (PREDICTED: endogenous alpha-amylase/subtilisin inhibitor-like [Cucumis sativus] >KGN60878.1 hypothetical protein Csa_2G021000 [Cucumis sativus]) HSP 1 Score: 422.9 bits (1086), Expect = 5.9e-115 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0
BLAST of CsaV3_2G005010.1 vs. NCBI nr
Match: XP_008455014.1 (PREDICTED: endogenous alpha-amylase/subtilisin inhibitor-like [Cucumis melo]) HSP 1 Score: 383.6 bits (984), Expect = 4.0e-103 Identity = 181/198 (91.41%), Postives = 186/198 (93.94%), Query Frame = 0
BLAST of CsaV3_2G005010.1 vs. NCBI nr
Match: XP_022938134.1 (alpha-amylase/subtilisin inhibitor-like [Cucurbita moschata]) HSP 1 Score: 320.5 bits (820), Expect = 4.1e-84 Identity = 147/183 (80.33%), Postives = 162/183 (88.52%), Query Frame = 0
BLAST of CsaV3_2G005010.1 vs. NCBI nr
Match: XP_023521354.1 (alpha-amylase/subtilisin inhibitor-like [Cucurbita pepo subsp. pepo] >XP_023538197.1 alpha-amylase/subtilisin inhibitor-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 318.5 bits (815), Expect = 1.6e-83 Identity = 146/183 (79.78%), Postives = 162/183 (88.52%), Query Frame = 0
BLAST of CsaV3_2G005010.1 vs. NCBI nr
Match: XP_022965952.1 (kunitz trypsin inhibitor 1-like [Cucurbita maxima]) HSP 1 Score: 311.2 bits (796), Expect = 2.5e-81 Identity = 144/183 (78.69%), Postives = 158/183 (86.34%), Query Frame = 0
BLAST of CsaV3_2G005010.1 vs. TAIR10
Match: AT1G73260.1 (kunitz trypsin inhibitor 1) HSP 1 Score: 82.8 bits (203), Expect = 2.6e-16 Identity = 56/183 (30.60%), Postives = 81/183 (44.26%), Query Frame = 0
BLAST of CsaV3_2G005010.1 vs. Swiss-Prot
Match: sp|Q8RXD5|KTI1_ARATH (Kunitz trypsin inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=KTI1 PE=2 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 4.7e-15 Identity = 56/183 (30.60%), Postives = 81/183 (44.26%), Query Frame = 0
BLAST of CsaV3_2G005010.1 vs. Swiss-Prot
Match: sp|P29421|IAAS_ORYSJ (Alpha-amylase/subtilisin inhibitor OS=Oryza sativa subsp. japonica OX=39947 GN=RASI PE=1 SV=2) HSP 1 Score: 78.6 bits (192), Expect = 8.9e-14 Identity = 56/167 (33.53%), Postives = 75/167 (44.91%), Query Frame = 0
BLAST of CsaV3_2G005010.1 vs. Swiss-Prot
Match: sp|P32765|ASP_THECC (21 kDa seed protein OS=Theobroma cacao OX=3641 GN=ASP PE=2 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 7.8e-10 Identity = 43/143 (30.07%), Postives = 66/143 (46.15%), Query Frame = 0
BLAST of CsaV3_2G005010.1 vs. Swiss-Prot
Match: sp|P25272|KTI1_SOYBN (Kunitz-type trypsin inhibitor KTI1 OS=Glycine max OX=3847 GN=KTI1 PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.1e-08 Identity = 52/175 (29.71%), Postives = 78/175 (44.57%), Query Frame = 0
BLAST of CsaV3_2G005010.1 vs. Swiss-Prot
Match: sp|P58514|SPI1_SOLTU (Serine protease inhibitor 1 OS=Solanum tuberosum OX=4113 PE=1 SV=2) HSP 1 Score: 59.7 bits (143), Expect = 4.3e-08 Identity = 42/182 (23.08%), Postives = 72/182 (39.56%), Query Frame = 0
BLAST of CsaV3_2G005010.1 vs. TrEMBL
Match: tr|A0A0A0LGB4|A0A0A0LGB4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021000 PE=4 SV=1) HSP 1 Score: 422.9 bits (1086), Expect = 3.9e-115 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0
BLAST of CsaV3_2G005010.1 vs. TrEMBL
Match: tr|A0A1S3C0M7|A0A1S3C0M7_CUCME (endogenous alpha-amylase/subtilisin inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103495287 PE=4 SV=1) HSP 1 Score: 383.6 bits (984), Expect = 2.6e-103 Identity = 181/198 (91.41%), Postives = 186/198 (93.94%), Query Frame = 0
BLAST of CsaV3_2G005010.1 vs. TrEMBL
Match: tr|D1KFM3|D1KFM3_9ROSI (Kunitz-type protease inhibitor KPI-F4 OS=Populus trichocarpa x Populus deltoides OX=3695 PE=2 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 5.0e-54 Identity = 113/188 (60.11%), Postives = 127/188 (67.55%), Query Frame = 0
BLAST of CsaV3_2G005010.1 vs. TrEMBL
Match: tr|D1KFM4|D1KFM4_9ROSI (Kunitz-type protease inhibitor KPI-F4 OS=Populus trichocarpa x Populus nigra OX=293756 PE=2 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 5.0e-54 Identity = 113/188 (60.11%), Postives = 127/188 (67.55%), Query Frame = 0
BLAST of CsaV3_2G005010.1 vs. TrEMBL
Match: tr|G0Z2L7|G0Z2L7_POPNI (Kunitz-type trypsin inhibitor C5 OS=Populus nigra OX=3691 PE=2 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 6.5e-54 Identity = 112/188 (59.57%), Postives = 127/188 (67.55%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
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