CsaV3_1G044100 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGCAAGAATTGGACGTATTTTGTCGATCGTCTCGTCTCGTCTCGTCTCTTCAATTGTTCTGTCCATCATCTTCTCAACCTTCACTTCCATTTTCATTTTCATGGAGGTTTCGTCTCAAAACTAATCTCATGTTTTGTTTGATTTCTTATTTGCATTCATTCACTGTTATTTTAGTTTGTGGATTTAACATTCTCCACTGTTCTAATTTTTTCTTGAATTTTGCTTAAATAGGTTGTTGATTTAAAGGTTTGCTTACATTGTAAGTCTTGCGAAAACTCTGTTCGCAAAACCCTTTGCAAAATTAAAGGTATGATTTTTTTTTTGTGGTGTGTGATTTAATTTATGACTATTTTCATTTGGTTATATCTAAAATAATCAAATAGTTATCGAGAGTAGTCAAATACATAATAATAATATTTTTTAAAAATAAATTTAGTTAAAAGATAGGAGATAACGAAAACCGCTCATTTAATATGATAACAACAATAGAAAAAGATTACTATTTGTTTGATTCCGACATTTCTTCTAATATGATGTTAATCGTTCAATTTAAAGAGTGAAAGTGATTGTAACAACGATTTACTTTTGAAGAAAGTCGATATTATTTCAATTTATTTAATTATTAATTTGAATATTTGAATGATATAAGTTTATAACTATCCAACTTTAGGGTATATTATATATTGATTCTTTACCCTTGTTTTTCTTTATAGAAGAAATGAAAATATTTTTTCCCTCGGTAACTAGAAATAACTTTTCAATTAAGCACGATTTAATTACAAGAATGTGAAATAGAACGAATGTTTAAAAGTTTAAATGATGTTAGAGTATAATAATTCAAGTATAAATATGAACAAATAGGAGTGAAATGCGTGGAAACGAATAGAGCTCTGAACAAGATCACAGTATTGGGTTATATGGATCGTAAAATAGTCATCAAGGAGGTACGAAAAACAGGTAGAAAGGCTGAAGTTTTGTCATCATCATCCTATCGCCACCCCTCGACACCGCGTTTGAAAAGTCGACGAGCAACAACTGCTTTCAAATGCATAATGCCATCTTGTTTTCTCTAAAAGATTCTGGCTCGGGTAAATACATGGTCTTGTTTTGAATGTTTACGTCATTTTGCAAAATAAACTTGACAAATGGGAGACGAAAATTTGAATTCTTAATATAGAAAATATGTCTCAATCAATTCAATTATGTTTTAATGGATTAATCCAACAATTAAATGGTAAAATGAGTAATAATGTG GCAAGAATTGGACGTATTTTGTCGATCGTCTCGTCTCGTCTCGTCTCTTCAATTGTTCTGTCCATCATCTTCTCAACCTTCACTTCCATTTTCATTTTCATGGAGGTTGTTGATTTAAAGGTTTGCTTACATTGTAAGTCTTGCGAAAACTCTGTTCGCAAAACCCTTTGCAAAATTAAAGGAGTGAAATGCGTGGAAACGAATAGAGCTCTGAACAAGATCACAGTATTGGGTTATATGGATCGTAAAATAGTCATCAAGGAGGTACGAAAAACAGGTAGAAAGGCTGAAGTTTTGTCATCATCATCCTATCGCCACCCCTCGACACCGCGTTTGAAAAGTCGACGAGCAACAACTGCTTTCAAATGCATAATGCCATCTTGTTTTCTCTAA GCAAGAATTGGACGTATTTTGTCGATCGTCTCGTCTCGTCTCGTCTCTTCAATTGTTCTGTCCATCATCTTCTCAACCTTCACTTCCATTTTCATTTTCATGGAGGTTGTTGATTTAAAGGTTTGCTTACATTGTAAGTCTTGCGAAAACTCTGTTCGCAAAACCCTTTGCAAAATTAAAGGAGTGAAATGCGTGGAAACGAATAGAGCTCTGAACAAGATCACAGTATTGGGTTATATGGATCGTAAAATAGTCATCAAGGAGGTACGAAAAACAGGTAGAAAGGCTGAAGTTTTGTCATCATCATCCTATCGCCACCCCTCGACACCGCGTTTGAAAAGTCGACGAGCAACAACTGCTTTCAAATGCATAATGCCATCTTGTTTTCTCTAA ARIGRILSIVSSRLVSSIVLSIIFSTFTSIFIFMEVVDLKVCLHCKSCENSVRKTLCKIKGVKCVETNRALNKITVLGYMDRKIVIKEVRKTGRKAEVLSSSSYRHPSTPRLKSRRATTAFKCIMPSCFL
BLAST of CsaV3_1G044100 vs. NCBI nr
Match: KGN66625.1 (hypothetical protein Csa_1G650120 [Cucumis sativus]) HSP 1 Score: 194.5 bits (493), Expect = 2.2e-46 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of CsaV3_1G044100 vs. NCBI nr
Match: XP_023516678.1 (heavy metal-associated isoprenylated plant protein 20-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 172.6 bits (436), Expect = 9.1e-40 Identity = 87/96 (90.62%), Postives = 92/96 (95.83%), Query Frame = 0
BLAST of CsaV3_1G044100 vs. NCBI nr
Match: XP_022961030.1 (heavy metal-associated isoprenylated plant protein 20-like [Cucurbita moschata]) HSP 1 Score: 169.9 bits (429), Expect = 5.9e-39 Identity = 85/96 (88.54%), Postives = 92/96 (95.83%), Query Frame = 0
BLAST of CsaV3_1G044100 vs. NCBI nr
Match: XP_022158060.1 (heavy metal-associated isoprenylated plant protein 30-like [Momordica charantia]) HSP 1 Score: 139.4 bits (350), Expect = 8.6e-30 Identity = 68/97 (70.10%), Postives = 78/97 (80.41%), Query Frame = 0
BLAST of CsaV3_1G044100 vs. NCBI nr
Match: XP_002530373.1 (heavy metal-associated isoprenylated plant protein 45 [Ricinus communis] >EEF32006.1 copper ion binding protein, putative [Ricinus communis]) HSP 1 Score: 111.3 bits (277), Expect = 2.5e-21 Identity = 53/95 (55.79%), Postives = 71/95 (74.74%), Query Frame = 0
BLAST of CsaV3_1G044100 vs. TAIR10
Match: AT1G71050.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 65.9 bits (159), Expect = 2.2e-11 Identity = 31/77 (40.26%), Postives = 49/77 (63.64%), Query Frame = 0
BLAST of CsaV3_1G044100 vs. TAIR10
Match: AT2G18196.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 62.8 bits (151), Expect = 1.8e-10 Identity = 30/78 (38.46%), Postives = 50/78 (64.10%), Query Frame = 0
BLAST of CsaV3_1G044100 vs. TAIR10
Match: AT5G17450.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 62.8 bits (151), Expect = 1.8e-10 Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = 0
BLAST of CsaV3_1G044100 vs. TAIR10
Match: AT1G22990.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 62.0 bits (149), Expect = 3.1e-10 Identity = 28/62 (45.16%), Postives = 42/62 (67.74%), Query Frame = 0
BLAST of CsaV3_1G044100 vs. TAIR10
Match: AT1G06330.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 62.0 bits (149), Expect = 3.1e-10 Identity = 29/67 (43.28%), Postives = 47/67 (70.15%), Query Frame = 0
BLAST of CsaV3_1G044100 vs. Swiss-Prot
Match: sp|Q9C9A3|HIP20_ARATH (Heavy metal-associated isoprenylated plant protein 20 OS=Arabidopsis thaliana OX=3702 GN=HIPP20 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 3.9e-10 Identity = 31/77 (40.26%), Postives = 49/77 (63.64%), Query Frame = 0
BLAST of CsaV3_1G044100 vs. Swiss-Prot
Match: sp|Q9LF57|HIP21_ARATH (Heavy metal-associated isoprenylated plant protein 21 OS=Arabidopsis thaliana OX=3702 GN=HIPP21 PE=1 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 3.3e-09 Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = 0
BLAST of CsaV3_1G044100 vs. Swiss-Prot
Match: sp|F4IQG4|HIP30_ARATH (Heavy metal-associated isoprenylated plant protein 30 OS=Arabidopsis thaliana OX=3702 GN=HIPP30 PE=1 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 3.3e-09 Identity = 30/78 (38.46%), Postives = 50/78 (64.10%), Query Frame = 0
BLAST of CsaV3_1G044100 vs. Swiss-Prot
Match: sp|Q93VP2|HIP22_ARATH (Heavy metal-associated isoprenylated plant protein 22 OS=Arabidopsis thaliana OX=3702 GN=HIPP22 PE=1 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 5.7e-09 Identity = 28/62 (45.16%), Postives = 42/62 (67.74%), Query Frame = 0
BLAST of CsaV3_1G044100 vs. Swiss-Prot
Match: sp|F4IC29|HIP28_ARATH (Heavy metal-associated isoprenylated plant protein 28 OS=Arabidopsis thaliana OX=3702 GN=HIPP28 PE=3 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 5.7e-09 Identity = 29/67 (43.28%), Postives = 47/67 (70.15%), Query Frame = 0
BLAST of CsaV3_1G044100 vs. TrEMBL
Match: tr|A0A0A0LXP2|A0A0A0LXP2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G650120 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 1.5e-46 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of CsaV3_1G044100 vs. TrEMBL
Match: tr|B9SWK4|B9SWK4_RICCO (Copper ion binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0771550 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.7e-21 Identity = 53/95 (55.79%), Postives = 71/95 (74.74%), Query Frame = 0
BLAST of CsaV3_1G044100 vs. TrEMBL
Match: tr|M5XVC0|M5XVC0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G001500 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 3.4e-19 Identity = 55/102 (53.92%), Postives = 72/102 (70.59%), Query Frame = 0
BLAST of CsaV3_1G044100 vs. TrEMBL
Match: tr|B9N813|B9N813_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G150200v3 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 3.4e-19 Identity = 55/102 (53.92%), Postives = 75/102 (73.53%), Query Frame = 0
BLAST of CsaV3_1G044100 vs. TrEMBL
Match: tr|A0A2N9GWG9|A0A2N9GWG9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS34588 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.3e-18 Identity = 55/93 (59.14%), Postives = 67/93 (72.04%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|