Carg17820 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17820
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Heavy metal-associated isoprenylated plant protein
Location	Cucurbita_argyrosperma_scaffold_070 : 300938 .. 301741 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGCTTTTTCTCTCGATTTCTTCCTTTATATTCAACGCAGAGGCTTCGTCGTCTCCTCCGATTCCACTGTTCATCGTCGAGTTCCATTTCCATGGAGGTCTGATCTGAAGAACACCTTACATTTCCTCCATTTTCTTCTCTGAAACTAATCGCTTATTCTCTTAATTACTCCGTCCATTTATTCCATCGTTTTGGTGTTGAATTGATCACACAGGTCGTTGATTTAAAGGTTTGCTTGCATTGCAAATCCTGCGAAAATGCTGTTCGCAAAACGCTTTGCAAAATCAAAGGTACGGTTCTTTCGCCTTATTTTTAATTCGATTATAATTCATAAGTTCATGACATTGTTTTTGAATCATTTATAAAAGTTAAAAAATCGAGACAATTTTTAGTTTGAATTTTTGACGGATCCAACTTTCAAAAGTTTAAAAGACTTTATTAAAAGTTGTAATCATTCAAAGAGATTGATTTGATTATGAACATTGCAAACAGGAGTGAAATGTGTGGAAACAAATAGAGCTTTGAACAAGATCACCGTGTTGGGTTACATGGATCGTAAAATGATCATCAAGGAGGTACGAAAAACAGGACGAAAGGCCGAGGTATTGCCATCTTCGTCCCTCCGCCCCTCGACTCCACGTCGGAGAAGTCGAAGAGCAACATCTGCATTCAAATGTATATTGCCATCTTGTTTTCGCTAAAATTTGAATATGTCTTTAATGTTTGTGTCATTTTTTCGATTAAACTTTGCAATTTCATTATTATGTGTATTCATTTTTTCTAATATGAGTTTTTTTTTAGTCG

mRNA sequence

CAGCTTTTTCTCTCGATTTCTTCCTTTATATTCAACGCAGAGGCTTCGTCGTCTCCTCCGATTCCACTGTTCATCGTCGAGTTCCATTTCCATGGAGGTCGTTGATTTAAAGGTTTGCTTGCATTGCAAATCCTGCGAAAATGCTGTTCGCAAAACGCTTTGCAAAATCAAAGGAGTGAAATGTGTGGAAACAAATAGAGCTTTGAACAAGATCACCGTGTTGGGTTACATGGATCGTAAAATGATCATCAAGGAGGTACGAAAAACAGGACGAAAGGCCGAGGTATTGCCATCTTCGTCCCTCCGCCCCTCGACTCCACGTCGGAGAAGTCGAAGAGCAACATCTGCATTCAAATGTATATTGCCATCTTGTTTTCGCTAAAATTTGAATATGTCTTTAATGTTTGTGTCATTTTTTCGATTAAACTTTGCAATTTCATTATTATGTGTATTCATTTTTTCTAATATGAGTTTTTTTTTAGTCG

Coding sequence (CDS)

ATGGAGGTCGTTGATTTAAAGGTTTGCTTGCATTGCAAATCCTGCGAAAATGCTGTTCGCAAAACGCTTTGCAAAATCAAAGGAGTGAAATGTGTGGAAACAAATAGAGCTTTGAACAAGATCACCGTGTTGGGTTACATGGATCGTAAAATGATCATCAAGGAGGTACGAAAAACAGGACGAAAGGCCGAGGTATTGCCATCTTCGTCCCTCCGCCCCTCGACTCCACGTCGGAGAAGTCGAAGAGCAACATCTGCATTCAAATGTATATTGCCATCTTGTTTTCGCTAA

Protein sequence

MEVVDLKVCLHCKSCENAVRKTLCKIKGVKCVETNRALNKITVLGYMDRKMIIKEVRKTGRKAEVLPSSSLRPSTPRRRSRRATSAFKCILPSCFR

Homology

[Close]

BLAST of Carg17820 vs. NCBI nr
Match: XP_022961030.1 (heavy metal-associated isoprenylated plant protein 20-like [Cucurbita moschata])

HSP 1 Score: 187.6 bits (475), Expect = 2.0e-44
Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MEVVDLKVCLHCKSCENAVRKTLCKIKGVKCVETNRALNKITVLGYMDRKMIIKEVRKTG 60
          MEVVDLKVCLHCKSCENAVRKTLCKIKGVKCVETNRALNKITVLGYMDRKMIIKEVRKTG
Sbjct: 1  MEVVDLKVCLHCKSCENAVRKTLCKIKGVKCVETNRALNKITVLGYMDRKMIIKEVRKTG 60

Query: 61 RKAEVLPSSSLRPSTPRRRSRRATSAFKCILPSCFR 97
          RKA+VLPSSSLRPSTPRRRSRRATSAFKCILPSCFR
Sbjct: 61 RKAKVLPSSSLRPSTPRRRSRRATSAFKCILPSCFR 96

[Close]

BLAST of Carg17820 vs. NCBI nr
Match: XP_023516678.1 (heavy metal-associated isoprenylated plant protein 20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 186.4 bits (472), Expect = 4.5e-44
Identity = 94/96 (97.92%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MEVVDLKVCLHCKSCENAVRKTLCKIKGVKCVETNRALNKITVLGYMDRKMIIKEVRKTG 60
          MEVVDLKVCLHCKSCEN+VRKTLCKIKGVKCVETNRALNKITVLGYMDRKMIIKEVRKTG
Sbjct: 1  MEVVDLKVCLHCKSCENSVRKTLCKIKGVKCVETNRALNKITVLGYMDRKMIIKEVRKTG 60

Query: 61 RKAEVLPSSSLRPSTPRRRSRRATSAFKCILPSCFR 97
          RKAEVLPSSSLRPSTPR+RSRRATSAFKCILPSCFR
Sbjct: 61 RKAEVLPSSSLRPSTPRQRSRRATSAFKCILPSCFR 96

[Close]

BLAST of Carg17820 vs. NCBI nr
Match: KGN66625.1 (hypothetical protein Csa_1G650120 [Cucumis sativus])

HSP 1 Score: 169.1 bits (427), Expect = 7.4e-39
Identity = 86/96 (89.58%), Postives = 92/96 (95.83%), Query Frame = 0


Query: 1  MEVVDLKVCLHCKSCENAVRKTLCKIKGVKCVETNRALNKITVLGYMDRKMIIKEVRKTG 60
          MEVVDLKVCLHCKSCEN+VRKTLCKIKGVKCVETNRALNKITVLGYMDRK++IKEVRKTG
Sbjct: 1  MEVVDLKVCLHCKSCENSVRKTLCKIKGVKCVETNRALNKITVLGYMDRKIVIKEVRKTG 60

Query: 61 RKAEVLPSSSLR-PSTPRRRSRRATSAFKCILPSCF 96
          RKAEVL SSS R PSTPR +SRRAT+AFKCI+PSCF
Sbjct: 61 RKAEVLSSSSYRHPSTPRLKSRRATTAFKCIMPSCF 96

[Close]

BLAST of Carg17820 vs. NCBI nr
Match: XP_022158060.1 (heavy metal-associated isoprenylated plant protein 30-like [Momordica charantia])

HSP 1 Score: 140.6 bits (353), Expect = 2.8e-30
Identity = 70/96 (72.92%), Postives = 81/96 (84.38%), Query Frame = 0


Query: 1  MEVVDLKVCLHCKSCENAVRKTLCKIKGVKCVETNRALNKITVLGYMDRKMIIKEVRKTG 60
          MEVVDLKVCLHCK+CE A+RK LCKI+GVKCVE N ALNKITVLGYMDRK+++KEVRKTG
Sbjct: 1  MEVVDLKVCLHCKACEKALRKVLCKIRGVKCVEMNMALNKITVLGYMDRKVVVKEVRKTG 60

Query: 61 RKAEVLPSSSLRPSTP-RRRSRRATSAFKCILPSCF 96
          R+AEVLPS   R   P  RR+R A +A KC++PSCF
Sbjct: 61 RRAEVLPSPPCRRLPPSHRRTRPAAAALKCLMPSCF 96

[Close]

BLAST of Carg17820 vs. NCBI nr
Match: XP_021816479.1 (heavy metal-associated isoprenylated plant protein 28-like [Prunus avium])

HSP 1 Score: 112.8 bits (281), Expect = 6.3e-22
Identity = 63/101 (62.38%), Postives = 73/101 (72.28%), Query Frame = 0


Query: 1  MEVVDLKVCLHCKSCENAVRKTLCKIKGVKCVETNRALNKITVLGYMDRKMIIKEVRKTG 60
          MEVV+LKV LHC+ CE AVRK LC+IKGV+CVE +   NKITVLG+MDRKMI+K VRKTG
Sbjct: 1  MEVVELKVRLHCRDCEKAVRKALCRIKGVRCVEIDVISNKITVLGFMDRKMIVKAVRKTG 60

Query: 61 RKAEVLPSSSLRPST--------PRRRSRRATSAFKCILPS 94
          R+AEV PSS   PST        P R    + S F+CILPS
Sbjct: 61 RRAEVWPSSP--PSTSILSKSCCPAREQPTSPSGFRCILPS 99

[Close]

BLAST of Carg17820 vs. TAIR10
Match: AT1G71050.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 3.2e-12
Identity = 29/67 (43.28%), Postives = 47/67 (70.15%), Query Frame = 0


Query: 1  MEVVDLKVCLHCKSCENAVRKTLCKIKGVKCVETNRALNKITVLGYMDRKMIIKEVRKTG 60
          M+ V++KV + C  CE  V+  +  +KGVK VE NR ++K+TV GY++ K ++K + +TG
Sbjct: 27 MQTVNIKVKMDCDGCERRVKNAVSSMKGVKSVEVNRKIHKVTVSGYVEPKKVLKRIERTG 86

Query: 61 RKAEVLP 68
          +KAE+ P
Sbjct: 87 KKAEIWP 93

[Close]

BLAST of Carg17820 vs. TAIR10
Match: AT2G18196.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 6.1e-11
Identity = 30/77 (38.96%), Postives = 49/77 (63.64%), Query Frame = 0


Query: 1   MEVVDLKVCLHCKSCENAVRKTLCKIKGVKCVETNRALNKITVLGYMDRKMIIKEVRKTG 60
           ++ +DLKV + C  CE  V+  + K++GV  VE N  + ++TV+GY++RK ++K VR+ G
Sbjct: 45  LQTIDLKVRMCCSGCERVVKHAIYKLRGVDSVEVNLEMERVTVVGYVERKKVLKAVRRAG 104

Query: 61  RKAEVLPSSSLRPSTPR 78
           ++AE  P     P  PR
Sbjct: 105 KRAEFWP----YPDMPR 117

[Close]

BLAST of Carg17820 vs. TAIR10
Match: AT5G17450.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 6.1e-11
Identity = 30/67 (44.78%), Postives = 45/67 (67.16%), Query Frame = 0


Query: 1  MEVVDLKVCLHCKSCENAVRKTLCKIKGVKCVETNRALNKITVLGYMDRKMIIKEVRKTG 60
          ++ VD+KV + C  CE  VR  + ++KGVK VE NR  ++ITV G++D   ++K V+ TG
Sbjct: 25 LQTVDIKVKMDCDGCERRVRNVVRRMKGVKSVEVNRKQSRITVNGHVDPNKVLKRVKSTG 84

Query: 61 RKAEVLP 68
          +KAE  P
Sbjct: 85 KKAEFWP 91

[Close]

BLAST of Carg17820 vs. TAIR10
Match: AT1G22990.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 1.0e-10
Identity = 30/68 (44.12%), Postives = 46/68 (67.65%), Query Frame = 0


Query: 1  MEVVDLKVCLHCKSCENAVRKTLCKIKGVKCVETNRALNKITVLGYMDRKMIIKEVRKTG 60
          M+ V++KV + C  CE  ++  +  IKG K VE NR ++K+TV GY+D K ++K V+ TG
Sbjct: 28 MQTVNIKVKIDCDGCERKIKNAVSSIKGAKSVEVNRKMHKVTVSGYVDPKKVLKTVQSTG 87

Query: 61 -RKAEVLP 68
           +KAE+ P
Sbjct: 88 KKKAELWP 95

[Close]

BLAST of Carg17820 vs. TAIR10
Match: AT1G06330.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 1.8e-10
Identity = 27/65 (41.54%), Postives = 46/65 (70.77%), Query Frame = 0


Query: 1  MEVVDLKVCLHCKSCENAVRKTLCKIKGVKCVETNRALNKITVLGYMDRKMIIKEVRKTG 60
          ++ ++++V + C  CE+ V+  L K++GV  VE +    K+TV GY D+K ++K+VRKTG
Sbjct: 10 LQTIEMRVHMDCVGCESRVKNALQKMRGVDAVEIDMVQQKVTVTGYADQKKVLKKVRKTG 69

Query: 61 RKAEV 66
          R+AE+
Sbjct: 70 RRAEL 74

[Close]

BLAST of Carg17820 vs. Swiss-Prot
Match: sp|Q9C9A3|HIP20_ARATH (Heavy metal-associated isoprenylated plant protein 20 OS=Arabidopsis thaliana OX=3702 GN=HIPP20 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 5.8e-11
Identity = 29/67 (43.28%), Postives = 47/67 (70.15%), Query Frame = 0


Query: 1  MEVVDLKVCLHCKSCENAVRKTLCKIKGVKCVETNRALNKITVLGYMDRKMIIKEVRKTG 60
          M+ V++KV + C  CE  V+  +  +KGVK VE NR ++K+TV GY++ K ++K + +TG
Sbjct: 27 MQTVNIKVKMDCDGCERRVKNAVSSMKGVKSVEVNRKIHKVTVSGYVEPKKVLKRIERTG 86

Query: 61 RKAEVLP 68
          +KAE+ P
Sbjct: 87 KKAEIWP 93

[Close]

BLAST of Carg17820 vs. Swiss-Prot
Match: sp|Q9LF57|HIP21_ARATH (Heavy metal-associated isoprenylated plant protein 21 OS=Arabidopsis thaliana OX=3702 GN=HIPP21 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.1e-09
Identity = 30/67 (44.78%), Postives = 45/67 (67.16%), Query Frame = 0


Query: 1  MEVVDLKVCLHCKSCENAVRKTLCKIKGVKCVETNRALNKITVLGYMDRKMIIKEVRKTG 60
          ++ VD+KV + C  CE  VR  + ++KGVK VE NR  ++ITV G++D   ++K V+ TG
Sbjct: 25 LQTVDIKVKMDCDGCERRVRNVVRRMKGVKSVEVNRKQSRITVNGHVDPNKVLKRVKSTG 84

Query: 61 RKAEVLP 68
          +KAE  P
Sbjct: 85 KKAEFWP 91

[Close]

BLAST of Carg17820 vs. Swiss-Prot
Match: sp|F4IQG4|HIP30_ARATH (Heavy metal-associated isoprenylated plant protein 30 OS=Arabidopsis thaliana OX=3702 GN=HIPP30 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.1e-09
Identity = 30/77 (38.96%), Postives = 49/77 (63.64%), Query Frame = 0


Query: 1   MEVVDLKVCLHCKSCENAVRKTLCKIKGVKCVETNRALNKITVLGYMDRKMIIKEVRKTG 60
           ++ +DLKV + C  CE  V+  + K++GV  VE N  + ++TV+GY++RK ++K VR+ G
Sbjct: 45  LQTIDLKVRMCCSGCERVVKHAIYKLRGVDSVEVNLEMERVTVVGYVERKKVLKAVRRAG 104

Query: 61  RKAEVLPSSSLRPSTPR 78
           ++AE  P     P  PR
Sbjct: 105 KRAEFWP----YPDMPR 117

[Close]

BLAST of Carg17820 vs. Swiss-Prot
Match: sp|Q93VP2|HIP22_ARATH (Heavy metal-associated isoprenylated plant protein 22 OS=Arabidopsis thaliana OX=3702 GN=HIPP22 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.9e-09
Identity = 30/68 (44.12%), Postives = 46/68 (67.65%), Query Frame = 0


Query: 1  MEVVDLKVCLHCKSCENAVRKTLCKIKGVKCVETNRALNKITVLGYMDRKMIIKEVRKTG 60
          M+ V++KV + C  CE  ++  +  IKG K VE NR ++K+TV GY+D K ++K V+ TG
Sbjct: 28 MQTVNIKVKIDCDGCERKIKNAVSSIKGAKSVEVNRKMHKVTVSGYVDPKKVLKTVQSTG 87

Query: 61 -RKAEVLP 68
           +KAE+ P
Sbjct: 88 KKKAELWP 95

[Close]

BLAST of Carg17820 vs. Swiss-Prot
Match: sp|F4IC29|HIP28_ARATH (Heavy metal-associated isoprenylated plant protein 28 OS=Arabidopsis thaliana OX=3702 GN=HIPP28 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.2e-09
Identity = 27/65 (41.54%), Postives = 46/65 (70.77%), Query Frame = 0


Query: 1  MEVVDLKVCLHCKSCENAVRKTLCKIKGVKCVETNRALNKITVLGYMDRKMIIKEVRKTG 60
          ++ ++++V + C  CE+ V+  L K++GV  VE +    K+TV GY D+K ++K+VRKTG
Sbjct: 10 LQTIEMRVHMDCVGCESRVKNALQKMRGVDAVEIDMVQQKVTVTGYADQKKVLKKVRKTG 69

Query: 61 RKAEV 66
          R+AE+
Sbjct: 70 RRAEL 74

[Close]

BLAST of Carg17820 vs. TrEMBL
Match: tr|A0A0A0LXP2|A0A0A0LXP2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G650120 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 4.9e-39
Identity = 86/96 (89.58%), Postives = 92/96 (95.83%), Query Frame = 0


Query: 1  MEVVDLKVCLHCKSCENAVRKTLCKIKGVKCVETNRALNKITVLGYMDRKMIIKEVRKTG 60
          MEVVDLKVCLHCKSCEN+VRKTLCKIKGVKCVETNRALNKITVLGYMDRK++IKEVRKTG
Sbjct: 1  MEVVDLKVCLHCKSCENSVRKTLCKIKGVKCVETNRALNKITVLGYMDRKIVIKEVRKTG 60

Query: 61 RKAEVLPSSSLR-PSTPRRRSRRATSAFKCILPSCF 96
          RKAEVL SSS R PSTPR +SRRAT+AFKCI+PSCF
Sbjct: 61 RKAEVLSSSSYRHPSTPRLKSRRATTAFKCIMPSCF 96

[Close]

BLAST of Carg17820 vs. TrEMBL
Match: tr|M5XVC0|M5XVC0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G001500 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 7.1e-22
Identity = 62/101 (61.39%), Postives = 73/101 (72.28%), Query Frame = 0


Query: 1  MEVVDLKVCLHCKSCENAVRKTLCKIKGVKCVETNRALNKITVLGYMDRKMIIKEVRKTG 60
          ME+V+LKV LHC+ CE AVRK LC+IKGV+CVE +   NKITVLG+MDRKMI+K VRKTG
Sbjct: 1  MEIVELKVRLHCRVCEKAVRKALCRIKGVRCVEIDVTSNKITVLGFMDRKMIVKAVRKTG 60

Query: 61 RKAEVLPSSSLRPST--------PRRRSRRATSAFKCILPS 94
          R+AEV PSS   PST        P R    + S F+CILPS
Sbjct: 61 RRAEVWPSSP--PSTSILSKSCCPAREQPTSPSGFRCILPS 99

[Close]

BLAST of Carg17820 vs. TrEMBL
Match: tr|B9SWK4|B9SWK4_RICCO (Copper ion binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0771550 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 7.8e-21
Identity = 54/95 (56.84%), Postives = 71/95 (74.74%), Query Frame = 0


Query: 1  MEVVDLKVCLHCKSCENAVRKTLCKIKGVKCVETNRALNKITVLGYMDRKMIIKEVRKTG 60
          ME+V+LKV LHCK+CE AVR+TLCKIKGV+CVE     NK+TVLGYMDRK+++K + KTG
Sbjct: 1  MEIVELKVRLHCKACEKAVRRTLCKIKGVRCVEIENISNKVTVLGYMDRKVVVKAIWKTG 60

Query: 61 RKAEVLPSS-SLRPSTPRRRSRRATSAFKCILPSC 95
          ++AE+LPSS  L   +P     R  + F+C +P C
Sbjct: 61 QRAELLPSSHHLEAPSP-----RLPAGFRCFIPKC 90

[Close]

BLAST of Carg17820 vs. TrEMBL
Match: tr|A0A2N9GWG9|A0A2N9GWG9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS34588 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.1e-19
Identity = 58/92 (63.04%), Postives = 69/92 (75.00%), Query Frame = 0


Query: 1  MEVVDLKVCLHCKSCENAVRKTLCKIKGVKCVETNRALNKITVLGYMDRKMIIKEVRKTG 60
          MEVV+LKV LHCK+CE AVR+ LCKIKGV CVE +  L+KITVLGY+DRK ++K VRKTG
Sbjct: 1  MEVVELKVRLHCKACEKAVRRALCKIKGVTCVEIDVVLSKITVLGYIDRKEVVKAVRKTG 60

Query: 61 RKAEVLPSSSLRPSTPRRRSRRATSAFKCILP 93
          R+AEV P SS R   PR+  R     F CI+P
Sbjct: 61 RRAEVWP-SSCRWEEPRQAGR-----FGCIIP 86

[Close]

BLAST of Carg17820 vs. TrEMBL
Match: tr|B9N813|B9N813_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G150200v3 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.1e-19
Identity = 53/98 (54.08%), Postives = 72/98 (73.47%), Query Frame = 0


Query: 1  MEVVDLKVCLHCKSCENAVRKTLCKIKGVKCVETNRALNKITVLGYMDRKMIIKEVRKTG 60
          MEV++LKV LHCK+CE AVRK LC+IKGV CV+ +   NKITV+GY+D+KM++K + KTG
Sbjct: 1  MEVIELKVHLHCKACEKAVRKALCRIKGVTCVQIDGISNKITVMGYLDKKMVVKAIWKTG 60

Query: 61 RKAEVLPSSSLRPSTPRRRSRRATSAFKCILPS--CFR 97
          R+A+VLPSS          S R  + F+CI+P+  CF+
Sbjct: 61 RRADVLPSSPSPRLEAPAPSPRLPTGFRCIIPAKWCFK 98

The following BLAST results are available for this feature:

BLAST of Carg17820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961030.1	2.0e-44	98.96	heavy metal-associated isoprenylated plant protein 20-like [Cucurbita moschata]	[more]
XP_023516678.1	4.5e-44	97.92	heavy metal-associated isoprenylated plant protein 20-like [Cucurbita pepo subsp...	[more]
KGN66625.1	7.4e-39	89.58	hypothetical protein Csa_1G650120 [Cucumis sativus]	[more]
XP_022158060.1	2.8e-30	72.92	heavy metal-associated isoprenylated plant protein 30-like [Momordica charantia]	[more]
XP_021816479.1	6.3e-22	62.38	heavy metal-associated isoprenylated plant protein 28-like [Prunus avium]	[more]

BLAST of Carg17820 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G71050.1	3.2e-12	43.28	Heavy metal transport/detoxification superfamily protein	[more]
AT2G18196.1	6.1e-11	38.96	Heavy metal transport/detoxification superfamily protein	[more]
AT5G17450.1	6.1e-11	44.78	Heavy metal transport/detoxification superfamily protein	[more]
AT1G22990.1	1.0e-10	44.12	Heavy metal transport/detoxification superfamily protein	[more]
AT1G06330.1	1.8e-10	41.54	Heavy metal transport/detoxification superfamily protein	[more]

BLAST of Carg17820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9C9A3\|HIP20_ARATH	5.8e-11	43.28	Heavy metal-associated isoprenylated plant protein 20 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9LF57\|HIP21_ARATH	1.1e-09	44.78	Heavy metal-associated isoprenylated plant protein 21 OS=Arabidopsis thaliana OX...	[more]
sp\|F4IQG4\|HIP30_ARATH	1.1e-09	38.96	Heavy metal-associated isoprenylated plant protein 30 OS=Arabidopsis thaliana OX...	[more]
sp\|Q93VP2\|HIP22_ARATH	1.9e-09	44.12	Heavy metal-associated isoprenylated plant protein 22 OS=Arabidopsis thaliana OX...	[more]
sp\|F4IC29\|HIP28_ARATH	3.2e-09	41.54	Heavy metal-associated isoprenylated plant protein 28 OS=Arabidopsis thaliana OX...	[more]

BLAST of Carg17820 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LXP2\|A0A0A0LXP2_CUCSA	4.9e-39	89.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G650120 PE=4 SV=1	[more]
tr\|M5XVC0\|M5XVC0_PRUPE	7.1e-22	61.39	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G001500 PE=4 SV=1	[more]
tr\|B9SWK4\|B9SWK4_RICCO	7.8e-21	56.84	Copper ion binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0771550...	[more]
tr\|A0A2N9GWG9\|A0A2N9GWG9_FAGSY	1.1e-19	63.04	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS34588 PE=4 SV=1	[more]
tr\|B9N813\|B9N813_POPTR	1.1e-19	54.08	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G150200v3 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0030001	metal ion transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036163	HMA_dom_sf
IPR006121	HMA_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030001	metal ion transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17820-RA	Carg17820-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 10..62 e-value: 1.0E-7 score: 32.2
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 10..65 score: 9.866
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 10..64 e-value: 2.59194E-7 score: 42.2077
None	No IPR available	GENE3D	G3DSA:3.30.70.100		coord: 3..66 e-value: 4.2E-12 score: 48.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..83
None	No IPR available	PANTHER	PTHR22814:SF112	HEAVY METAL TRANSPORT/DETOXIFICATION-LIKE PROTEIN	coord: 2..80
None	No IPR available	PANTHER	PTHR22814	COPPER TRANSPORT PROTEIN ATOX1-RELATED	coord: 2..80
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	SSF55008	HMA, heavy metal-associated domain	coord: 3..66

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg17820	Csa1G650120	Cucumber (Chinese Long) v2	carcuB0982
Carg17820	CmaCh10G008530	Cucurbita maxima (Rimu)	carcmaB1335
Carg17820	CmoCh10G008900	Cucurbita moschata (Rifu)	carcmoB1297
Carg17820	Cp4.1LG18g02300	Cucurbita pepo (Zucchini)	carcpeB1341
Carg17820	CsGy1G030850	Cucumber (Gy14) v2	carcgybB0955
Carg17820	CsaV3_1G044100	Cucumber (Chinese Long) v3	carcucB1010

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17820	Cucurbita pepo (Zucchini)	carcpeB1340
Carg17820	Wild cucumber (PI 183967)	carcpiB1005
Carg17820	Bottle gourd (USVL1VR-Ls)	carlsiB886
Carg17820	Melon (DHL92) v3.5.1	carmeB0946
Carg17820	Melon (DHL92) v3.5.1	carmeB0947
Carg17820	Melon (DHL92) v3.6.1	carmedB0952
Carg17820	Melon (DHL92) v3.6.1	carmedB0953
Carg17820	Watermelon (Charleston Gray)	carwcgB0944
Carg17820	Watermelon (97103) v1	carwmB0969
Carg17820	Watermelon (97103) v1	carwmB0971
Carg17820	Watermelon (97103) v2	carwmbB1020
Carg17820	Wax gourd	carwgoB1135
Carg17820	Silver-seed gourd	carcarB502
Carg17820	Cucumber (Gy14) v1	carcgyB1085
Carg17820	Cucurbita maxima (Rimu)	carcmaB1336
Carg17820	Cucurbita moschata (Rifu)	carcmoB1298