CsaV3_1G037500 (gene) Cucumber (Chinese Long) v3

NameCsaV3_1G037500
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1 : 23429878 .. 23430042 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATCAGCAAAATTTACAAAACATATCAGATGTGTCTATCCCAATGCAAAATGTCATGTCGGGAAGAGCGTTGACAATGTTGCGTCATGGTAGGCCAAAGCTTTTGCCCGATGGGGTCTACGTCGACCGGCGATCGACGTCGGAGAAGCATTGTCCGGTGTGA

mRNA sequence

ATGCATCAGCAAAATTTACAAAACATATCAGATGTGTCTATCCCAATGCAAAATGTCATGTCGGGAAGAGCGTTGACAATGTTGCGTCATGGTAGGCCAAAGCTTTTGCCCGATGGGGTCTACGTCGACCGGCGATCGACGTCGGAGAAGCATTGTCCGGTGTGA

Coding sequence (CDS)

ATGCATCAGCAAAATTTACAAAACATATCAGATGTGTCTATCCCAATGCAAAATGTCATGTCGGGAAGAGCGTTGACAATGTTGCGTCATGGTAGGCCAAAGCTTTTGCCCGATGGGGTCTACGTCGACCGGCGATCGACGTCGGAGAAGCATTGTCCGGTGTGA

Protein sequence

MHQQNLQNISDVSIPMQNVMSGRALTMLRHGRPKLLPDGVYVDRRSTSEKHCPV
BLAST of CsaV3_1G037500 vs. NCBI nr
Match: KGN65941.1 (hypothetical protein Csa_1G540360 [Cucumis sativus])

HSP 1 Score: 115.2 bits (287), Expect = 7.3e-23
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0

Query: 1  MHQQNLQNISDVSIPMQNVMSGRALTMLRHGRPKLLPDGVYVDRRSTSEKHCPV 55
          MHQQNLQNISDVSIPMQNVMSGRALTMLRHGRPKLLPDGVYVDRRSTSEKHCPV
Sbjct: 1  MHQQNLQNISDVSIPMQNVMSGRALTMLRHGRPKLLPDGVYVDRRSTSEKHCPV 54

BLAST of CsaV3_1G037500 vs. TrEMBL
Match: tr|A0A0A0M172|A0A0A0M172_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G540360 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 4.8e-23
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0

Query: 1  MHQQNLQNISDVSIPMQNVMSGRALTMLRHGRPKLLPDGVYVDRRSTSEKHCPV 55
          MHQQNLQNISDVSIPMQNVMSGRALTMLRHGRPKLLPDGVYVDRRSTSEKHCPV
Sbjct: 1  MHQQNLQNISDVSIPMQNVMSGRALTMLRHGRPKLLPDGVYVDRRSTSEKHCPV 54

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN65941.17.3e-23100.00hypothetical protein Csa_1G540360 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0M172|A0A0A0M172_CUCSA4.8e-23100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G540360 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G037500.1CsaV3_1G037500.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None