CsaV3_1G027980 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G027980
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Coatomer beta subunit
Location	chr1 : 14915838 .. 14918671 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTTTGTTGTTAGACCATAAAATGCCACTCTAATAAAATTAAAGAATCATCCTCCCACCATATGTGCCTACACCTCAAGCCTTTGAGAGGCACCCTAGCTTCATAATCCCACAAAATCCACCCTAGAAGGGACCATTTCCTACCATGACCTTATTCCATCTTCCACGATTTTGCACATGAAGCATGATCTGATGAACAAAACCTTGAATGAAGTCTACCAACAAAGGAACCAAGATAATACATCCATGGAACAATACCATTTTATTCCACGATGTTTTTATCCACCCCAACATCACAAGCAACAAATTGAAGTTTTCCAACGATCATGTTCATGCATGGTCCAATCAATCCATCCACAACATTAGATACAATTTTTTAATCATGGTGAAATGTCGTAATAAGTTAAAACTCTATTTGATAACCAATTTGTTTGTTTGTGTTTTTTAGTTTTTGAAAATTAAGACTACTCTATCACATTTTTTAAAATTGATTTACATTCTTTTTAAGAAAAAGGAGTTGAATTCCTAGCTTAATTTAGAAAACAAAAGTTACACATTTTTTAATTTTCAAAATTGGCTTGATTAAAAACATGAGTATTTATAAGTTTTATTTTCACAAACTAATAATAAAAAATCAAATATTTATTAATGGAGTCCAAAATTATTATAATTTCCCACTTTCTCATTTGGTAGTTGCAATTTGATTTCTTAAAAAATAAATTTAATCAATGCTTTTTCTTAGTTGCATTCAATAACTTTAGTTTAAAAAAAGTTAGTCCAATTGACCATTATATTGAAGATTAAGAATTTTGTGTGTGAAATTTACGTTTTATTGTACTAAAAGGATAAATTGTTTGTTTTTGAATTCAAACTAAATGATATTTGATTAATGATTAAACCTTTTATTTAATATTTTAAATCATCGCTTAATGGTCAATAAAAATTAATGGCTTTCATAAAATATTTGAGAAATATGTTTAAGATATATGTTAGCCACTTACTCCATATTCAAGTAAAAAATTAAGAAAAAGAAAACTATTTTGAATAAGTGTATTTTGTTAGTTATGTTAAGTTGAGATTATCACGGAGAAAGATGGATATTGTAAAAAGTTGTAAGAGGGAAAGAATTAGAAAGGTAAATTAGTTTATAAATGAAATAATTAGTGTTGAAAAGGATTTTTTGGAAGGCAACTCCAACGCCAACGCCAACCAATGTTTATTGTATTTTATTTTATTTTTCAATGAATTTGAAAATATATGATTAGAAACAAAAAGAAAATAGAAAGTCCAATTCCTCGGCTTCCTGAACTATTATTATAACTAAAATCATTCTTTTGCTACTTTTGTTTGTATGTAGAACCGAGAGCGCCACATCGTTCTCTCTCGAACAACCCCTGCTCCAGAATTCAAACTCCTTCCCCTCCCCCTCCCCCATGGATGATTCTTCCAAGAACGAAGATAGCCCACGAGTTGTTAGAGTTCTCGAAGCTCTCAAGCAAGCCTCTCATGAATTACAATCAAATCCAAATCCTCGTTCCCACGAGTTCAATTCTCCCGCCATTAAAGCTCTGCTTGAACTCGAGGTTGAATCCGACAAAAACCTTTCCACCGATCCAAATCTCTCCACTCTCTCTCACCATCTCGCCAACCTAAAATCCTTAGTGGACACGCTTCAGAAATCCAGAGGTTACAGTCCCAGGTCATTCTTAACCCGCCGTTTCGCCACGAATTCCGTATCGCAAGTCGCCGGTTCAATCGAATCGGAGATTCAAGCTTGGATTGACCGTAAAAGCTTGGACACTTTGGTTCGAGCTCTTAAAGAGCCTTCAATCGATGAGAACGAATTGATTAAGTTACTAACTCAGTTTGAGAATCGACTCGCTCAAGGTTTCAACCGTGAATTACAGGATCTCATGCTGAAATCGAAGGTGTTTTCGCTGCTTGAATCGATCGTTTGTAACCCTAATTTCTCGAAAACGATCCGAGAGCATTCCGCGTATGTGATTGGGGGAATGGTCCGTTTCAATAAAGATGTATTCGTCGGTCAAATATTAATGGGACCGACAATTCATGCCCTAGTTGAAATGGCTTCTTCTCACTCATTAAAAATCCTCTGCTCTTTAATCAGATTAATTAGGTCTCCGTTGGTGGAGGAAATCGAATCAAACGGCGATATACCAAAAATAATAAGCTTATTGAATTGTGCAGATCTGCAAATTAGGGTTTTAGCCATGGATTGCATTGTCGAAATTGGGTATTTTGGGCGTAAAGATACCGTAGATGCTATGCTGGAACAGGATTTGATAGACAGGCTTGTGGAGTTGCAGAGGTCGGAATTGGGCGGGGATTTGATCGGACTAGGAAAACACACGGCAGAGGAGAGTAGAGAGGTCACTGGGAGCGCCGGAGAGAAGAGGTTCTTGGAGAAGCATCCATTTGCGAGCTGTGTAGCGAAATTTGGAGTGCAATTGGAGGTTGGAGAAGGGTTGAGGAAGAGGGAAAAGAGGGCGATTAAGGGTGAAATTTTGAAGAGAGTTCGAAAAGCTTGTGTTTCGGATGCTGAAGCAGCCACCATAATTGCTGAGGTTTTGTGGGGTTCAAGTCCTTGATTGATAGGAAACTGTGAGGGGATTTTGGTTTGATTGTGTTCATGAATATGGTGGATCGAAGGAATCGATGAGGTGCGTAAGTTCCAAATTTTTGTTTCTGGGATGATGAACATTCATTCATCAATCCTTTGTCTCTGTTCATATGTTGGTGTCATAGTTATATGTTGGAATCAAAAATGTAAATCAAAGTAGTGTAATTAAAAAAAAGACAATATATTTTTTATA

mRNA sequence

ATGGATGATTCTTCCAAGAACGAAGATAGCCCACGAGTTGTTAGAGTTCTCGAAGCTCTCAAGCAAGCCTCTCATGAATTACAATCAAATCCAAATCCTCGTTCCCACGAGTTCAATTCTCCCGCCATTAAAGCTCTGCTTGAACTCGAGGTTGAATCCGACAAAAACCTTTCCACCGATCCAAATCTCTCCACTCTCTCTCACCATCTCGCCAACCTAAAATCCTTAGTGGACACGCTTCAGAAATCCAGAGGTTACAGTCCCAGGTCATTCTTAACCCGCCGTTTCGCCACGAATTCCGTATCGCAAGTCGCCGGTTCAATCGAATCGGAGATTCAAGCTTGGATTGACCGTAAAAGCTTGGACACTTTGGTTCGAGCTCTTAAAGAGCCTTCAATCGATGAGAACGAATTGATTAAGTTACTAACTCAGTTTGAGAATCGACTCGCTCAAGGTTTCAACCGTGAATTACAGGATCTCATGCTGAAATCGAAGGTGTTTTCGCTGCTTGAATCGATCGTTTGTAACCCTAATTTCTCGAAAACGATCCGAGAGCATTCCGCGTATGTGATTGGGGGAATGGTCCGTTTCAATAAAGATGTATTCGTCGGTCAAATATTAATGGGACCGACAATTCATGCCCTAGTTGAAATGGCTTCTTCTCACTCATTAAAAATCCTCTGCTCTTTAATCAGATTAATTAGGTCTCCGTTGGTGGAGGAAATCGAATCAAACGGCGATATACCAAAAATAATAAGCTTATTGAATTGTGCAGATCTGCAAATTAGGGTTTTAGCCATGGATTGCATTGTCGAAATTGGGTATTTTGGGCGTAAAGATACCGTAGATGCTATGCTGGAACAGGATTTGATAGACAGGCTTGTGGAGTTGCAGAGGTCGGAATTGGGCGGGGATTTGATCGGACTAGGAAAACACACGGCAGAGGAGAGTAGAGAGGTCACTGGGAGCGCCGGAGAGAAGAGGTTCTTGGAGAAGCATCCATTTGCGAGCTGTGTAGCGAAATTTGGAGTGCAATTGGAGGTTGGAGAAGGGTTGAGGAAGAGGGAAAAGAGGGCGATTAAGGGTGAAATTTTGAAGAGAGTTCGAAAAGCTTGTGTTTCGGATGCTGAAGCAGCCACCATAATTGCTGAGGTTTTGTGGGGTTCAAGTCCTTGA

Coding sequence (CDS)

ATGGATGATTCTTCCAAGAACGAAGATAGCCCACGAGTTGTTAGAGTTCTCGAAGCTCTCAAGCAAGCCTCTCATGAATTACAATCAAATCCAAATCCTCGTTCCCACGAGTTCAATTCTCCCGCCATTAAAGCTCTGCTTGAACTCGAGGTTGAATCCGACAAAAACCTTTCCACCGATCCAAATCTCTCCACTCTCTCTCACCATCTCGCCAACCTAAAATCCTTAGTGGACACGCTTCAGAAATCCAGAGGTTACAGTCCCAGGTCATTCTTAACCCGCCGTTTCGCCACGAATTCCGTATCGCAAGTCGCCGGTTCAATCGAATCGGAGATTCAAGCTTGGATTGACCGTAAAAGCTTGGACACTTTGGTTCGAGCTCTTAAAGAGCCTTCAATCGATGAGAACGAATTGATTAAGTTACTAACTCAGTTTGAGAATCGACTCGCTCAAGGTTTCAACCGTGAATTACAGGATCTCATGCTGAAATCGAAGGTGTTTTCGCTGCTTGAATCGATCGTTTGTAACCCTAATTTCTCGAAAACGATCCGAGAGCATTCCGCGTATGTGATTGGGGGAATGGTCCGTTTCAATAAAGATGTATTCGTCGGTCAAATATTAATGGGACCGACAATTCATGCCCTAGTTGAAATGGCTTCTTCTCACTCATTAAAAATCCTCTGCTCTTTAATCAGATTAATTAGGTCTCCGTTGGTGGAGGAAATCGAATCAAACGGCGATATACCAAAAATAATAAGCTTATTGAATTGTGCAGATCTGCAAATTAGGGTTTTAGCCATGGATTGCATTGTCGAAATTGGGTATTTTGGGCGTAAAGATACCGTAGATGCTATGCTGGAACAGGATTTGATAGACAGGCTTGTGGAGTTGCAGAGGTCGGAATTGGGCGGGGATTTGATCGGACTAGGAAAACACACGGCAGAGGAGAGTAGAGAGGTCACTGGGAGCGCCGGAGAGAAGAGGTTCTTGGAGAAGCATCCATTTGCGAGCTGTGTAGCGAAATTTGGAGTGCAATTGGAGGTTGGAGAAGGGTTGAGGAAGAGGGAAAAGAGGGCGATTAAGGGTGAAATTTTGAAGAGAGTTCGAAAAGCTTGTGTTTCGGATGCTGAAGCAGCCACCATAATTGCTGAGGTTTTGTGGGGTTCAAGTCCTTGA

Protein sequence

MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTDPNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKSLDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFSKTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVEEIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRSELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAIKGEILKRVRKACVSDAEAATIIAEVLWGSSP

Homology

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BLAST of CsaV3_1G027980 vs. NCBI nr
Match: KGN65105.1 (hypothetical protein Csa_1G222880 [Cucumis sativus])

HSP 1 Score: 750.7 bits (1937), Expect = 2.4e-213
Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 0


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD
Sbjct: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS
Sbjct: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120

Query: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180
           LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS
Sbjct: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180

Query: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240
           KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE
Sbjct: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240

Query: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300
           EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS
Sbjct: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300

Query: 301 ELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAI 360
           ELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAI
Sbjct: 301 ELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAI 360

Query: 361 KGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           KGEILKRVRKACVSDAEAATIIAEVLWGSSP
Sbjct: 361 KGEILKRVRKACVSDAEAATIIAEVLWGSSP 391

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BLAST of CsaV3_1G027980 vs. NCBI nr
Match: XP_022134648.1 (uncharacterized protein LOC111006872 [Momordica charantia])

HSP 1 Score: 640.6 bits (1651), Expect = 3.5e-180
Identity = 341/401 (85.04%), Postives = 366/401 (91.27%), Query Frame = 0


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           MDDSSK ED+PRV+RVLEALKQ SHELQ++P+P S EF+SPAIKALLELEVESDK LS+D
Sbjct: 1   MDDSSK-EDTPRVLRVLEALKQVSHELQAHPSPGSDEFDSPAIKALLELEVESDKILSSD 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           PNLSTLSHHLANLKSLV+TLQKSRGY  RSF TRRFATNSVSQVAGSIESEIQAWIDR+S
Sbjct: 61  PNLSTLSHHLANLKSLVETLQKSRGYGLRSFFTRRFATNSVSQVAGSIESEIQAWIDRES 120

Query: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180
           L+TLVRALKEPSIDENE IKLLTQFENRL QGFNRELQDLMLKSKVFSLLESIVC+PNFS
Sbjct: 121 LETLVRALKEPSIDENESIKLLTQFENRLDQGFNRELQDLMLKSKVFSLLESIVCSPNFS 180

Query: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240
           KTIREHSAY IG MVRFNKDVFVGQ+L GPTIHALV+MASSHSLK+LCSLIRLIRSPLVE
Sbjct: 181 KTIREHSAYAIGAMVRFNKDVFVGQVLTGPTIHALVQMASSHSLKVLCSLIRLIRSPLVE 240

Query: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300
           EIESNGDIPKIISLLNC DLQIRVLAMDCIVEIGYFGRK+ VD ML++ LIDRLVELQRS
Sbjct: 241 EIESNGDIPKIISLLNCQDLQIRVLAMDCIVEIGYFGRKEAVDTMLDEGLIDRLVELQRS 300

Query: 301 ELGGDLIGLGKHTAEE-----SREVTG-----SAGEKRFLEKHPFASCVAKFGVQLEVGE 360
           ELGGDLIGLG+ TAEE     + EV G      + EK+FLE+HPFASCVA+F VQLEVGE
Sbjct: 301 ELGGDLIGLGRQTAEEGTGVAAGEVEGRREGRESREKKFLERHPFASCVARFTVQLEVGE 360

Query: 361 GLRKREKRAIKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           GLR+REKRAIK EILKRV KACVSDAEAATI+AEVLWGSSP
Sbjct: 361 GLRQREKRAIKPEILKRVTKACVSDAEAATIMAEVLWGSSP 400

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BLAST of CsaV3_1G027980 vs. NCBI nr
Match: XP_021663544.1 (uncharacterized protein LOC110652288 isoform X1 [Hevea brasiliensis] >XP_021663545.1 uncharacterized protein LOC110652288 isoform X2 [Hevea brasiliensis])

HSP 1 Score: 510.4 bits (1313), Expect = 5.5e-141
Identity = 264/399 (66.17%), Postives = 329/399 (82.46%), Query Frame = 0


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           M+D S  E+  RV++VLEAL+QASH+LQ++P PR+ + NSPAIKALLEL+ ESD  LS D
Sbjct: 1   MEDPSSKEEISRVLKVLEALRQASHDLQAHPIPRTADSNSPAIKALLELQTESDTILSKD 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           P+LSTLS HL +L++LVDT QKSRGYS R+FLTRR +T+S+S+VAGSIESEIQAWIDR+S
Sbjct: 61  PHLSTLSQHLTSLRTLVDTRQKSRGYSLRNFLTRRVSTHSISRVAGSIESEIQAWIDRES 120

Query: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180
           ++ L   LK    +E+EL+ LLTQFENRL+QGFNRELQDL+LKSK+  LLE I+C+PN S
Sbjct: 121 IENLTTLLKGTVKNEDELVSLLTQFENRLSQGFNRELQDLILKSKILLLLEKIICDPNCS 180

Query: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240
           K IRE  A+V+  ++RFNKDVFVGQ+LMGP IHALV MAS  S+++LC+LI+LI+SPLV+
Sbjct: 181 KRIREQCAFVVAALIRFNKDVFVGQMLMGPLIHALVSMASWKSMEVLCTLIKLIKSPLVD 240

Query: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300
           EIES+G+IPKIIS L+  DL++RVL MDCI+EIGYFGRK+ ++AML++ LI +LV+LQRS
Sbjct: 241 EIESSGEIPKIISFLDYKDLELRVLTMDCILEIGYFGRKEAIEAMLKEGLIKKLVDLQRS 300

Query: 301 ELGGDLIGLGKHTAEESREVTGS--------AGEKRFLEKHPFASCVAKFGVQLEVGEGL 360
           ELGGDLI +G+   +E+     +        + EKRFLE HPFASCVA+F VQLEVGEGL
Sbjct: 301 ELGGDLIDMGRFDGKETANGNSAEDKIERRESREKRFLEIHPFASCVARFAVQLEVGEGL 360

Query: 361 RKREKRAIKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           R+REKRA K EILKRVR A VSDAEAATI+AEVLWGSSP
Sbjct: 361 RQREKRAFKQEILKRVRHASVSDAEAATIVAEVLWGSSP 399

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BLAST of CsaV3_1G027980 vs. NCBI nr
Match: XP_024925320.1 (uncharacterized protein LOC112490105 [Ziziphus jujuba])

HSP 1 Score: 510.4 bits (1313), Expect = 5.5e-141
Identity = 271/408 (66.42%), Postives = 334/408 (81.86%), Query Frame = 0


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           MDD SK E+ PRV++VLEALKQASHELQ++P     E NS AIKALLELE ESD  LS D
Sbjct: 1   MDDPSK-EEGPRVLKVLEALKQASHELQAHPRQDFDEPNSSAIKALLELETESDTILSKD 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGY-SPRSFLTRRFATNSVSQVAGSIESEIQAWIDRK 120
           PNLS LS HL +LK+LV+T QK RG+ S RSFLTRR +T+S+S+VAGSIE+EIQAWIDR+
Sbjct: 61  PNLSILSQHLTSLKNLVETFQKCRGHLSIRSFLTRRVSTHSISRVAGSIENEIQAWIDRE 120

Query: 121 SLDTLVRALKEPSID-ENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPN 180
           S++ L   L+EP  D E E ++LLTQFE+RLA+GFNRELQDL+LKSKVFSLLES +C+P+
Sbjct: 121 SVENLTWVLREPGNDKEEETVRLLTQFEDRLAEGFNRELQDLILKSKVFSLLESTLCDPD 180

Query: 181 FSKTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPL 240
            SK IREHSA+ IG ++RFNKDVFVGQ+LMGPT  AL+ MAS HS+K+LC LIR I+SPL
Sbjct: 181 SSKRIREHSAFAIGALIRFNKDVFVGQVLMGPTTRALITMASPHSIKVLCFLIRSIKSPL 240

Query: 241 VEEIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQ 300
           V+ IESNG+IP+II+ LNC D+Q+RV+AMDCI+EIGYFGRK+ +DAMLE+ LI +LVELQ
Sbjct: 241 VDVIESNGEIPRIIAFLNCQDVQVRVMAMDCILEIGYFGRKEAIDAMLEEGLIKKLVELQ 300

Query: 301 RSELGGDLIGLGKHTA-----EESREVTG----------SAGEKRFLEKHPFASCVAKFG 360
           RSELGGDLI LG++++     +E+REV+            + E+RFLE HPFASCVA+F 
Sbjct: 301 RSELGGDLIELGRYSSKNENEKENREVSADGVELGKKRRESRERRFLESHPFASCVARFA 360

Query: 361 VQLEVGEGLRKREKRAIKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           VQLEVGEGLR+RE+RA K +I+ RVR+A  SDAEAATI+AEVLWG+SP
Sbjct: 361 VQLEVGEGLRQRERRAFKQQIVVRVREASASDAEAATIVAEVLWGASP 407

[Close]

BLAST of CsaV3_1G027980 vs. NCBI nr
Match: XP_024925321.1 (uncharacterized protein LOC112490106 [Ziziphus jujuba])

HSP 1 Score: 507.7 bits (1306), Expect = 3.6e-140
Identity = 270/408 (66.18%), Postives = 333/408 (81.62%), Query Frame = 0


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           MDD SK E+ PRV++VLEALKQASHELQ++P     E NS AIKALLELE ESD  LS D
Sbjct: 1   MDDPSK-EEGPRVLKVLEALKQASHELQAHPRQDFDEPNSSAIKALLELETESDTILSKD 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGY-SPRSFLTRRFATNSVSQVAGSIESEIQAWIDRK 120
           PNLS LS HL +LK+LV+T QK RG+ S RSFLTRR +T+S+S+VAGSIE+EIQAWIDR+
Sbjct: 61  PNLSILSQHLTSLKNLVETFQKCRGHLSIRSFLTRRVSTHSISRVAGSIENEIQAWIDRE 120

Query: 121 SLDTLVRALKEPSID-ENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPN 180
           S++ L   L+EP  + E E ++LLTQFE+RLA+GFNRELQDL+LKSKVFSLLES +C+P+
Sbjct: 121 SVENLTWVLREPGNNKEEETVRLLTQFEDRLAEGFNRELQDLILKSKVFSLLESTLCDPD 180

Query: 181 FSKTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPL 240
            SK IREHSA+ IG  +RFNKDVFVGQ+LMGPT  AL+ MAS HS+K+LC LIR I+SPL
Sbjct: 181 SSKRIREHSAFAIGAFIRFNKDVFVGQVLMGPTTRALITMASPHSIKVLCFLIRSIKSPL 240

Query: 241 VEEIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQ 300
           V+ IESNG+IP+II+ LNC D+Q+RV+AMDCI+EIGYFGRK+ +DAMLE+ LI +LVELQ
Sbjct: 241 VDVIESNGEIPRIIAFLNCQDVQVRVMAMDCILEIGYFGRKEAIDAMLEEGLIKKLVELQ 300

Query: 301 RSELGGDLIGLGKHTA-----EESREVTG----------SAGEKRFLEKHPFASCVAKFG 360
           RSELGGDLI LG++++     +E+REV+            + E+RFLE HPFASCVA+F 
Sbjct: 301 RSELGGDLIELGRYSSKNENEKENREVSADGVELGKKRRESRERRFLESHPFASCVARFA 360

Query: 361 VQLEVGEGLRKREKRAIKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           VQLEVGEGLR+RE+RA K +I+ RVR+A  SDAEAATI+AEVLWG+SP
Sbjct: 361 VQLEVGEGLRQRERRAFKQQIVVRVREASASDAEAATIVAEVLWGASP 407

[Close]

BLAST of CsaV3_1G027980 vs. TrEMBL
Match: tr|A0A0A0LT75|A0A0A0LT75_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G222880 PE=4 SV=1)

HSP 1 Score: 750.7 bits (1937), Expect = 1.6e-213
Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 0


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD
Sbjct: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS
Sbjct: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120

Query: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180
           LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS
Sbjct: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180

Query: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240
           KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE
Sbjct: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240

Query: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300
           EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS
Sbjct: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300

Query: 301 ELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAI 360
           ELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAI
Sbjct: 301 ELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAI 360

Query: 361 KGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           KGEILKRVRKACVSDAEAATIIAEVLWGSSP
Sbjct: 361 KGEILKRVRKACVSDAEAATIIAEVLWGSSP 391

[Close]

BLAST of CsaV3_1G027980 vs. TrEMBL
Match: tr|A0A2P4MNE4|A0A2P4MNE4_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_42394 PE=4 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 1.7e-138
Identity = 274/415 (66.02%), Postives = 332/415 (80.00%), Query Frame = 0


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFN-SPAIKALLELEVESDKNLST 60
           M+D S   DSPRV+ VLEALKQASHELQ++P+P S E N S AI ALLELE ESD  LS 
Sbjct: 1   MEDPSSKGDSPRVLEVLEALKQASHELQAHPSPNSDEVNSSSAINALLELETESDTILSK 60

Query: 61  DPNLSTLSHHLANLKSLVDTLQKS-RGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDR 120
           DPNLS LS HL+NLK+LV+TL+ S R +S RSFLTRR +T+S+S+VAGSIESEIQAWIDR
Sbjct: 61  DPNLSALSQHLSNLKALVETLKNSRRHHSIRSFLTRRVSTHSISRVAGSIESEIQAWIDR 120

Query: 121 KSLDTLVRALKE-PSID-ENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCN 180
           +S++TL R L+E P  D E+ELIKLLTQ ENR+++GFNRELQDL+LKSK+FS LE+I+C+
Sbjct: 121 ESIETLTRGLREQPKFDSEDELIKLLTQLENRVSEGFNRELQDLVLKSKLFSYLETILCD 180

Query: 181 PNFSKTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRS 240
           PN SK IRE  A+ IG ++RFNKDVFVGQ+LMGPTI +LV M SS S+K+LCSLIR I+S
Sbjct: 181 PNCSKRIRERCAFAIGALIRFNKDVFVGQVLMGPTIGSLVTMGSSASIKVLCSLIRSIKS 240

Query: 241 PLVEEIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVE 300
           PLV+EIES G+IPKII  L+  DL+I+VLAMDC++EIGYFGRK+ ++AML++ LI +LVE
Sbjct: 241 PLVDEIESLGNIPKIIMFLDSQDLEIKVLAMDCVLEIGYFGRKEAIEAMLKEGLIKKLVE 300

Query: 301 LQRSELGGDLIGLGKHTAE------ESREVTG--------------SAGEKRFLEKHPFA 360
           LQRSELGGDLI +G++         E+ E  G               + EKRFLE HPFA
Sbjct: 301 LQRSELGGDLIDMGRNGGTIDNVKFENNEGVGXXXXXXXXGVEGKRESREKRFLEMHPFA 360

Query: 361 SCVAKFGVQLEVGEGLRKREKRAIKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           +CVA+F VQLEVGEGLR+RE+RA K EIL RVR+ACVSDAEAATIIAEVLWGSSP
Sbjct: 361 NCVARFAVQLEVGEGLRQRERRAFKQEILARVREACVSDAEAATIIAEVLWGSSP 415

[Close]

BLAST of CsaV3_1G027980 vs. TrEMBL
Match: tr|A0A2C9VQ29|A0A2C9VQ29_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G045500 PE=4 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 1.7e-138
Identity = 261/399 (65.41%), Postives = 323/399 (80.95%), Query Frame = 0


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           M+D S  E+  RV++VLEAL+QASH+LQ++P P+S + +SPAIKALLELE ESD  LS D
Sbjct: 1   MEDPSSKEEISRVLKVLEALRQASHDLQAHPTPKSADPDSPAIKALLELETESDTILSKD 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           P+LSTLS HL +L++LVDTLQKSRGYS ++FLTRR +T+S+S+VAGSIESEIQAWIDR+S
Sbjct: 61  PHLSTLSQHLTSLRTLVDTLQKSRGYSLKNFLTRRVSTHSISRVAGSIESEIQAWIDRES 120

Query: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180
           +D L   LKE   +E+EL+ LLTQFE RL+QGFNRELQDL+LKSK+  LLE I+C+PN S
Sbjct: 121 IDNLTTLLKETVQNEDELVGLLTQFEKRLSQGFNRELQDLVLKSKILLLLEKIICDPNCS 180

Query: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240
           K IRE  ++V+  + +FNKDVFVGQ+LMGP IHALV MAS  S+K+LC+LI+LI+SPLV+
Sbjct: 181 KRIREQCSFVVAALFQFNKDVFVGQVLMGPLIHALVSMASWKSMKVLCTLIKLIKSPLVD 240

Query: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300
           EIESNG IPKII+ L+  DLQ+ V  MDCI+EIGY GRK+ ++AML + LI +LV+LQRS
Sbjct: 241 EIESNGQIPKIINFLDYKDLQLLVQTMDCILEIGYSGRKEAIEAMLREGLIKKLVDLQRS 300

Query: 301 ELGGDLIGLGKHTAEESREVTGS--------AGEKRFLEKHPFASCVAKFGVQLEVGEGL 360
           ELGGDLI +G+   +E+ +   +            RFLE HPFASCVAKF VQLEVGEGL
Sbjct: 301 ELGGDLIDMGRFDEKETNKEDSNXXXXXXXXXXXXRFLESHPFASCVAKFAVQLEVGEGL 360

Query: 361 RKREKRAIKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           R+REKRA K EILKRVR+A VSDAEAATI+AEVLWGSSP
Sbjct: 361 RQREKRAFKQEILKRVREASVSDAEAATIVAEVLWGSSP 399

[Close]

BLAST of CsaV3_1G027980 vs. TrEMBL
Match: tr|A0A2P4MPD4|A0A2P4MPD4_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_14767 PE=4 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 3.8e-138
Identity = 273/415 (65.78%), Postives = 332/415 (80.00%), Query Frame = 0


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFN-SPAIKALLELEVESDKNLST 60
           M+D S   DSPRV+ VLEALKQASHELQ++P+P S E N S AI ALLELE ESD  LS 
Sbjct: 1   MEDPSSKGDSPRVLEVLEALKQASHELQAHPSPNSDEVNSSSAINALLELETESDTILSK 60

Query: 61  DPNLSTLSHHLANLKSLVDTLQKS-RGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDR 120
           DPNLS LS HL+NLK+LV+TL+ S R +S RSFLTRR +T+S+S+VAGSIESEIQAWIDR
Sbjct: 61  DPNLSALSQHLSNLKALVETLKNSRRHHSIRSFLTRRVSTHSISRVAGSIESEIQAWIDR 120

Query: 121 KSLDTLVRALKE-PSID-ENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCN 180
           +S++TL R L+E P  D E+ELIKLLTQ ENR+++GFNRELQDL+LKSK+FS LE+I+C+
Sbjct: 121 ESIETLTRGLREQPKFDSEDELIKLLTQLENRVSEGFNRELQDLVLKSKLFSYLETILCD 180

Query: 181 PNFSKTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRS 240
           PN SK +RE  A+ IG ++RFNKDVFVGQ+LMGPTI +LV M SS S+K+LCSLIR I+S
Sbjct: 181 PNCSKRMRERCAFAIGALIRFNKDVFVGQVLMGPTIGSLVTMGSSASIKVLCSLIRSIKS 240

Query: 241 PLVEEIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVE 300
           PLV+EIES G+IPKII  L+  DL+I+VLAMDC++EIGYFGRK+ ++AML++ LI +LVE
Sbjct: 241 PLVDEIESLGNIPKIIMFLDSQDLEIKVLAMDCVLEIGYFGRKEAIEAMLKEGLIKKLVE 300

Query: 301 LQRSELGGDLIGLGKHTAE------ESREVTG--------------SAGEKRFLEKHPFA 360
           LQRSELGGDLI +G++         E+ E  G               + EKRFLE HPFA
Sbjct: 301 LQRSELGGDLIDMGRNGGTIDNVKFENNEGVGXXXXXXXXGVEGKRESREKRFLEMHPFA 360

Query: 361 SCVAKFGVQLEVGEGLRKREKRAIKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           +CVA+F VQLEVGEGLR+RE+RA K EIL RVR+ACVSDAEAATIIAEVLWGSSP
Sbjct: 361 NCVARFAVQLEVGEGLRQRERRAFKQEILARVREACVSDAEAATIIAEVLWGSSP 415

[Close]

BLAST of CsaV3_1G027980 vs. TrEMBL
Match: tr|A0A2K1WZW0|A0A2K1WZW0_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G123400v3 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 6.4e-138
Identity = 261/392 (66.58%), Postives = 316/392 (80.61%), Query Frame = 0


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           M+D S  E+  RV++VLEALKQASHELQ+ P+    E NSPAIKALLELE ESD  LS D
Sbjct: 2   MEDPSSKEEITRVLKVLEALKQASHELQTLPSTNLTESNSPAIKALLELETESDTILSKD 61

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           P LSTLS HL  LKSLVDTLQK   +  RSFLTRR    S+S+VAGSI SEIQAWIDRKS
Sbjct: 62  PYLSTLSQHLTKLKSLVDTLQKCCDHGLRSFLTRRVLIQSISRVAGSIGSEIQAWIDRKS 121

Query: 121 LDTLVRALKEP-SIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNF 180
           +++L++ L EP   +E++L+ LL+QFE+R++QGFNRELQDL+LKSK+F LLE ++CNPN 
Sbjct: 122 IESLIKGLNEPLQTEEDDLVSLLSQFEDRVSQGFNRELQDLVLKSKIFCLLERVLCNPNC 181

Query: 181 SKTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLV 240
           SK +RE  A+V+  ++RFNKDVF GQ+LMGP IHALV MAS  S+K+LCSLI+ I+SPLV
Sbjct: 182 SKKVREQCAFVVSALIRFNKDVFAGQVLMGPLIHALVSMASWGSMKVLCSLIKSIKSPLV 241

Query: 241 EEIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQR 300
           +EIESNG+IPKIIS L+  DL  RV+AMDCI+EIGYFGRK+ ++AML + LI +L+ELQR
Sbjct: 242 DEIESNGEIPKIISFLDYKDLHWRVVAMDCILEIGYFGRKEAIEAMLREGLIKKLMELQR 301

Query: 301 SELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRA 360
           SELG DLI +G    E+ R      GEK+F E HPFASCVA+F VQLEVGEGLR+RE+RA
Sbjct: 302 SELGEDLIDMGMFDDEKER----GKGEKKFSESHPFASCVARFAVQLEVGEGLRQRERRA 361

Query: 361 IKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
            K EILKRVR+ACVSDAEAAT+IAEVLWGSSP
Sbjct: 362 FKQEILKRVREACVSDAEAATVIAEVLWGSSP 389

The following BLAST results are available for this feature:

BLAST of CsaV3_1G027980 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65105.1	2.4e-213	100.00	hypothetical protein Csa_1G222880 [Cucumis sativus]	[more]
XP_022134648.1	3.5e-180	85.04	uncharacterized protein LOC111006872 [Momordica charantia]	[more]
XP_021663544.1	5.5e-141	66.17	uncharacterized protein LOC110652288 isoform X1 [Hevea brasiliensis] >XP_0216635...	[more]
XP_024925320.1	5.5e-141	66.42	uncharacterized protein LOC112490105 [Ziziphus jujuba]	[more]
XP_024925321.1	3.6e-140	66.18	uncharacterized protein LOC112490106 [Ziziphus jujuba]	[more]

BLAST of CsaV3_1G027980 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G027980 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G027980 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LT75\|A0A0A0LT75_CUCSA	1.6e-213	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G222880 PE=4 SV=1	[more]
tr\|A0A2P4MNE4\|A0A2P4MNE4_QUESU	1.7e-138	66.02	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_42394 PE=4 SV=1	[more]
tr\|A0A2C9VQ29\|A0A2C9VQ29_MANES	1.7e-138	65.41	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G045500 PE=4 SV=...	[more]
tr\|A0A2P4MPD4\|A0A2P4MPD4_QUESU	3.8e-138	65.78	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_14767 PE=4 SV=1	[more]
tr\|A0A2K1WZW0\|A0A2K1WZW0_POPTR	6.4e-138	66.58	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G123400v3 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR011989	ARM-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005488	binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G027980.1	CsaV3_1G027980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 5..303 e-value: 1.2E-13 score: 52.5
None	No IPR available	PANTHER	PTHR35834	FAMILY NOT NAMED	coord: 5..391
None	No IPR available	PANTHER	PTHR35834:SF2	SUBFAMILY NOT NAMED	coord: 5..391
IPR016024	Armadillo-type fold	SUPERFAMILY	SSF48371	ARM repeat	coord: 88..301 coord: 33..54

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G027980	CSPI01G16510	Wild cucumber (PI 183967)	cpicucB011
CsaV3_1G027980	Cucsa.249400	Cucumber (Gy14) v1	cgycucB379
CsaV3_1G027980	CmaCh10G005130	Cucurbita maxima (Rimu)	cmacucB0067
CsaV3_1G027980	CmaCh11G005150	Cucurbita maxima (Rimu)	cmacucB0111
CsaV3_1G027980	CmoCh10G005490	Cucurbita moschata (Rifu)	cmocucB0054
CsaV3_1G027980	CmoCh11G005110	Cucurbita moschata (Rifu)	cmocucB0100
CsaV3_1G027980	Cp4.1LG18g05190	Cucurbita pepo (Zucchini)	cpecucB0429
CsaV3_1G027980	Cp4.1LG04g09170	Cucurbita pepo (Zucchini)	cpecucB0796
CsaV3_1G027980	Carg09950	Silver-seed gourd	carcucB0142
CsaV3_1G027980	Cla012193	Watermelon (97103) v1	cucwmB091
CsaV3_1G027980	MELO3C010295	Melon (DHL92) v3.5.1	cucmeB054
CsaV3_1G027980	ClCG06G011670	Watermelon (Charleston Gray)	cucwcgB074
CsaV3_1G027980	Lsi06G010160	Bottle gourd (USVL1VR-Ls)	cuclsiB073
CsaV3_1G027980	MELO3C010295.2	Melon (DHL92) v3.6.1	cucmedB052
CsaV3_1G027980	Cla97C06G120830	Watermelon (97103) v2	cucwmbB063
CsaV3_1G027980	Bhi02G000767	Wax gourd	cucwgoB104

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G027980	Cucumber (Gy14) v2	cgybcucB001
CsaV3_1G027980	Bottle gourd (USVL1VR-Ls)	cuclsiB084