CsaV3_1G027870 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTTTTCTTAATAAATATTATATATGTTTTTCAAATAAATATAATATTTGAATATTTAGATTGAAAATCTAAATAAATAATAAGAATAAAAAAAGATTAAGTTACAAAATGGAGTTGAAGTTAAGAACCAAAAGATACTTTTCCTTTTAATAGATGAGAAGAATCATCAAAGGGTATATCTGTAATTAAGAGGCAAGTTGACGTGGCAAAATCCTGGTGGGTCATACCGTGAGGATTTGGTGGGGGTTATACTAGACCGTTCCGCAGAGTATAATCAGAATCGGCACCGCGAACGAACAGGGAACTTCGGCCGAGTTGGTAAAGAGAGAGATAGAAAAAAGCAGAAGTATAATTGTGAGAACAGAACTGTAGAGTTTTGAAAGCGACTTTTTGGCCGCAAATTGGAGGAGACGAGGTTCCAAGGCTCTCTCCCTAATGATCTCTCTCTCTTTATCTTTCAATTTCCTTCTCTAACGGATTCGGACCATCGGAATTTGTTAATTTCACCATGTCTTGGTTTTTCAAGTCTTTCCAAGCCACCGATGATGGTATCTCAACGCAATCGCACTTTAACGCTTCTTCTTCGCCATCGGAATGCGTTCGTTTCACCACTGCTGATGATCCTTCTGTTGACAACGATTTCTCCGCATTCGGTGAGACGCTGAGCCGTCAGCTACGCGGCTTCGCTAACTTTCTCGCTCCACAACCGTCGCCGACGCCGACTGTCGTTTCTGCCGCTGATTCTTCCTATTCGAGTTCGAATTCTTCGTCACCGTCTCAAACGCTTCAGGGAATTCGCAATGATCTCGCTGAGATTGGCGGTGGCTTGAGGAACGGCTTCTCGATGCTCTCTGTTAATGGCAACAAGGCTGTTGGAGAGATTTCCAGGTTTGCTGCTAACTTGCTACCGTTTCGGAAACGTTCTGCCGATTATGAAGAAGACGACGAATTGGAAGACGAGGCTATTGATGATACACCGGGAATCACGAATGAGGTTCTAAATTTTGTGAACGATATTTCTTTGCGGCCGAAGTACTGGATGAATTTTCCTTTGGCGCTTGATGAAGCAGGTAAATCCAAAATCTCTGGCTCTTAATATTTGTGATAATGCTAAGTTAAAATAAATGTCTGTTTAATCATTGACCAGTGAATTTGGTATAAGATAGAGATTAGACTAAGAACATTACGCAGACCAAATAGCATGCTCCTTTTTCTTTTCTTCTTTTTTTCTTTCTATTTCTGCTCATTCATCTGATTTTTTTTTTTCAATTTGAAATTATGTTGGTACATTGTGCTTCATAATAATATGAATTAATTCAAATGCTTGGAGTTCCCATATTTTTAGAAAGAAGTAGCGAGGGGCATTGGTTACATTTATTTGAGGAATATGTCATCCCAGAACTCTTTTATGTGTTTGTTCAAATATATTTCTTACTATAATAGTTCAATGATAAATTAGGAACTAACACTTTCTCCATTCAATAAGATGTCAATTATGATTATGACTAATCTAGTTCAGTCATGATATACAGTAAGCACTCATCTGAAATTTGAATGTTTACATTTCAAGAATTGATTACTGGATGTATTGTTATCATCGTAACTGATTTCGTCTACCATCTTCAATTATTGGATGTGTATATACTGATTTCTAAGAGGTAGAGGAGGCATATTCCTACTCTGCCTAATCCAGGCTGTATTTACTGTTTTCTGTCATCTACCCTTCCATAACTAGAAGACAAGAATAATTGGAGAACCTTTTCTAGAAAATACTTAAGCCTTTTCCATGGAAAGCATGTATTTGTGCCATTTCACATCCCTCGTTGTGGAACACAATTTATGGGTGTCAACCTCTATATTGCTTTTCATTCTCATTTTAATGATTTCATATAGCCTGAGGACTTAGATATGATACCTCCCCATATGGTTAGCAACTAACTATAATGACAACTACGTTAAATTGGCATTGCTAGTTGAGTCAGCATCAAAATCCATTGAATATTTTTTACTTTATGCCAATCACTACAAGTTTTTCTTGTTTGGTGGTGGTAACTATTGATAAATATTTTACGTTTGGGTGCATATGCACGCCTATTATTATATTGATCAGCCTTCAATTATTGTTTACTATCAGCATAATACTTTGATTAGCTTTATTGCAGATTTTAAAATGTCTGACGTTCAAAGAATACACATTTCAACTGTTGAGCAATTGGTTCCAAGCATATCAGCTCTTAAAATAAAGCTTCAGAGTTTCATGAGCAATGAAATATTCTGGATGATTTATTTTATACTCTTGCTTCCAAGATTCAACCAATCTGATTTTGAGCTTCTCGCAACATCTGAAGTAAGATTCATTTCCTTTTCCGTACCATTTTTTGGTTGTTTGGTGTTTATTATGAGTATGGCTTATGAGTAATGTCTAAGTAAATATTTAGGACTGATTTCAAAATGGTTAAAACTGTTTTTGTTGTGTTCAAAACTAATTCAACTTTATTTTTACAAATGCAAGCACAATTTTTCATATTATTAAGATTGATTTTGAATGACCAAAAGAATTTTCAAATTGATTTAAACAAATCAGTCTCAAGCATGTCATAACTAATTCAACGTTATTTTTGCTTTTATTTGTGTTGTGTGCACACATTACTGTATTTCAAGTTCCTCTTGTGCTGCTTATTATCGCAGTGTCATAACTTTTGTTTTCCTTTTCTTTTGAATGGTACATTTTTTTCCCATGGTAGATAAAGGCTAAATACTTGGATATTATATTCTAAATTGAATACCAGTATGTATGTTAACATCTATGTGATGGTGAGATCACCACAAGCAAAAAATCCACCCTCATTTGAGAGAGACCATAATGATTAGCCATATTGAAATTGATCTATACTTACTGGATTTTTTAGGGAAGGATACGAAACATTCATTAAGGGAATGAAAAGAGGTGGGTGCCCTAAGATACACAAGGATATAACAAAACATAGCGTAGATGAAAAAGCCACAAAGTAACACTTGAATCCATAGTTTAGTTTGATCTTTCTGCTCTGTTGATTTGATTTACTTCCAATAATTAAATAATTAATGGTTATATTCAGTTTTTAGTATGATTGTTAAGAAAAATGAAATGAGACCATTTATTTTGGCTTATAATTAAAACTATCTTTAAAAATCAAAGAAACTAAACAACAAAGAAACAAAATTTAAAGATTAAGATCATTAAAATTTCAGTTTATTTGAAGAACCAGATTAGTTGAACGGAAAACTAACCAGTTGGATTCAAATCAAACTACACTTTTTGATGGTTAAGTTCAGTTGTAGTACTTATGACTGATGAGTGTGCCTAAGGTGTGGCAAATGATCTCATCATAACTTGTGTTTTGTTAAAAGAAAGAAATTTCAGTTATAGTACATAAAATTACCTAGGATTTAGGCTTAAATTGTTGGAGGGAAACAAATCTGAATTGCATTAGTTCCTCTCCTATTGGATTCATTCTGAACATGACAACCATTTAACCATTTCCAAATATTGCCGTTCATCGTTTGAGTTGATTTCTTCTTTGTCTCTGTCTCAAACGTTTCCTTTGGAGCATATTTTATTTAAGACTTGCAATCAAATTCAAGTCCCCACACACACATCTTTATTCAGATATATTCTACCTGAAGCTTGAGACTATTATTAAAGCTGACATATCTTTATTCTTTTTTTGGCAGATTGTCGAAGCAAGAAACATACTTCTGGATAAACTCCAAAGGAAAGAGAAACCACAAGTGAATTCTGAGAATAGTTACGATAACAATGTGGTTTGTGACACCCAACAAAAGGAGGAAAATACGGTATCCGAGGAAAAGCGAAACTCCACTCAAATAATTGAAGGATTGGAAACTGAGGATGGAGATCGAGGGAATACCAATCAACGATTGGCAAAGAGAGATTCAGAAATTTATAAAGCCGCCAAAAAAAGGGTTATTAGGGTCGAAGATGTCTCATTCAGTGATATAGAAGAAGAGGATGATGAGAGAAACCACTCACAAAGGATTTCTTCATCAACCGAATCTAGTGATTGGGTTCAGCTGCATGAAAGTCAAGACTCAAAAGAAGGTGGGGATTCGAGTGATTGGTTTGATGTGGATGAATTTGATTAAAAGATGGACATAATCATTAGGAGATCTTCGTTTTTCTCCAAACTTGCTTTTCTTTGCGTTAGAGTGCCATAAGGCTTTTTATAGTTTAGGTCTTTTTTTTTATTTTTTTATTTGACTTCTTTCATAGGTTAAATTTTGTGCATATGTTTTTTTTCTTCATAAGGTATTTAGGTTTTAGTGAATTTAATGCATTGTTATTCTTTCTGTCAATTGAGTGCCCCGTAATTTAATGATCGTTGTGATTTTGAAAGTTTTAAAAATTACTATTTATTTTTATTAAATTACTTTAGTGGGGAAGTAATATTAAAATTGTTGAAATCCGTTTCAAAATAAGTTTTTAATCCCTTGGAATTAATTTTATATTTAATTTACAAGTGTAGCTTTCATACTGATAAAATTAGTTGAGTATGTTCA ATGTCTTGGTTTTTCAAGTCTTTCCAAGCCACCGATGATGGTATCTCAACGCAATCGCACTTTAACGCTTCTTCTTCGCCATCGGAATGCGTTCGTTTCACCACTGCTGATGATCCTTCTGTTGACAACGATTTCTCCGCATTCGGTGAGACGCTGAGCCGTCAGCTACGCGGCTTCGCTAACTTTCTCGCTCCACAACCGTCGCCGACGCCGACTGTCGTTTCTGCCGCTGATTCTTCCTATTCGAGTTCGAATTCTTCGTCACCGTCTCAAACGCTTCAGGGAATTCGCAATGATCTCGCTGAGATTGGCGGTGGCTTGAGGAACGGCTTCTCGATGCTCTCTGTTAATGGCAACAAGGCTGTTGGAGAGATTTCCAGGTTTGCTGCTAACTTGCTACCGTTTCGGAAACGTTCTGCCGATTATGAAGAAGACGACGAATTGGAAGACGAGGCTATTGATGATACACCGGGAATCACGAATGAGGTTCTAAATTTTGTGAACGATATTTCTTTGCGGCCGAAGTACTGGATGAATTTTCCTTTGGCGCTTGATGAAGCAGATTTTAAAATGTCTGACGTTCAAAGAATACACATTTCAACTGTTGAGCAATTGGTTCCAAGCATATCAGCTCTTAAAATAAAGCTTCAGAGTTTCATGAGCAATGAAATATTCTGGATGATTTATTTTATACTCTTGCTTCCAAGATTCAACCAATCTGATTTTGAGCTTCTCGCAACATCTGAAATTGTCGAAGCAAGAAACATACTTCTGGATAAACTCCAAAGGAAAGAGAAACCACAAGTGAATTCTGAGAATAGTTACGATAACAATGTGGTTTGTGACACCCAACAAAAGGAGGAAAATACGGTATCCGAGGAAAAGCGAAACTCCACTCAAATAATTGAAGGATTGGAAACTGAGGATGGAGATCGAGGGAATACCAATCAACGATTGGCAAAGAGAGATTCAGAAATTTATAAAGCCGCCAAAAAAAGGGTTATTAGGGTCGAAGATGTCTCATTCAGTGATATAGAAGAAGAGGATGATGAGAGAAACCACTCACAAAGGATTTCTTCATCAACCGAATCTAGTGATTGGGTTCAGCTGCATGAAAGTCAAGACTCAAAAGAAGGTGGGGATTCGAGTGATTGGTTTGATGTGGATGAATTTGATTAA ATGTCTTGGTTTTTCAAGTCTTTCCAAGCCACCGATGATGGTATCTCAACGCAATCGCACTTTAACGCTTCTTCTTCGCCATCGGAATGCGTTCGTTTCACCACTGCTGATGATCCTTCTGTTGACAACGATTTCTCCGCATTCGGTGAGACGCTGAGCCGTCAGCTACGCGGCTTCGCTAACTTTCTCGCTCCACAACCGTCGCCGACGCCGACTGTCGTTTCTGCCGCTGATTCTTCCTATTCGAGTTCGAATTCTTCGTCACCGTCTCAAACGCTTCAGGGAATTCGCAATGATCTCGCTGAGATTGGCGGTGGCTTGAGGAACGGCTTCTCGATGCTCTCTGTTAATGGCAACAAGGCTGTTGGAGAGATTTCCAGGTTTGCTGCTAACTTGCTACCGTTTCGGAAACGTTCTGCCGATTATGAAGAAGACGACGAATTGGAAGACGAGGCTATTGATGATACACCGGGAATCACGAATGAGGTTCTAAATTTTGTGAACGATATTTCTTTGCGGCCGAAGTACTGGATGAATTTTCCTTTGGCGCTTGATGAAGCAGATTTTAAAATGTCTGACGTTCAAAGAATACACATTTCAACTGTTGAGCAATTGGTTCCAAGCATATCAGCTCTTAAAATAAAGCTTCAGAGTTTCATGAGCAATGAAATATTCTGGATGATTTATTTTATACTCTTGCTTCCAAGATTCAACCAATCTGATTTTGAGCTTCTCGCAACATCTGAAATTGTCGAAGCAAGAAACATACTTCTGGATAAACTCCAAAGGAAAGAGAAACCACAAGTGAATTCTGAGAATAGTTACGATAACAATGTGGTTTGTGACACCCAACAAAAGGAGGAAAATACGGTATCCGAGGAAAAGCGAAACTCCACTCAAATAATTGAAGGATTGGAAACTGAGGATGGAGATCGAGGGAATACCAATCAACGATTGGCAAAGAGAGATTCAGAAATTTATAAAGCCGCCAAAAAAAGGGTTATTAGGGTCGAAGATGTCTCATTCAGTGATATAGAAGAAGAGGATGATGAGAGAAACCACTCACAAAGGATTTCTTCATCAACCGAATCTAGTGATTGGGTTCAGCTGCATGAAAGTCAAGACTCAAAAGAAGGTGGGGATTCGAGTGATTGGTTTGATGTGGATGAATTTGATTAA MSWFFKSFQATDDGISTQSHFNASSSPSECVRFTTADDPSVDNDFSAFGETLSRQLRGFANFLAPQPSPTPTVVSAADSSYSSSNSSSPSQTLQGIRNDLAEIGGGLRNGFSMLSVNGNKAVGEISRFAANLLPFRKRSADYEEDDELEDEAIDDTPGITNEVLNFVNDISLRPKYWMNFPLALDEADFKMSDVQRIHISTVEQLVPSISALKIKLQSFMSNEIFWMIYFILLLPRFNQSDFELLATSEIVEARNILLDKLQRKEKPQVNSENSYDNNVVCDTQQKEENTVSEEKRNSTQIIEGLETEDGDRGNTNQRLAKRDSEIYKAAKKRVIRVEDVSFSDIEEEDDERNHSQRISSSTESSDWVQLHESQDSKEGGDSSDWFDVDEFD
BLAST of CsaV3_1G027870 vs. NCBI nr
Match: XP_004150532.1 (PREDICTED: uncharacterized protein LOC101209318 [Cucumis sativus] >KGN65116.1 hypothetical protein Csa_1G226440 [Cucumis sativus]) HSP 1 Score: 697.2 bits (1798), Expect = 3.2e-197 Identity = 392/392 (100.00%), Postives = 392/392 (100.00%), Query Frame = 0
BLAST of CsaV3_1G027870 vs. NCBI nr
Match: XP_008443945.1 (PREDICTED: uncharacterized protein LOC103487415 [Cucumis melo]) HSP 1 Score: 609.0 bits (1569), Expect = 1.1e-170 Identity = 336/396 (84.85%), Postives = 352/396 (88.89%), Query Frame = 0
BLAST of CsaV3_1G027870 vs. NCBI nr
Match: XP_023516908.1 (uncharacterized protein LOC111780673 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 431.4 bits (1108), Expect = 3.3e-117 Identity = 260/411 (63.26%), Postives = 296/411 (72.02%), Query Frame = 0
BLAST of CsaV3_1G027870 vs. NCBI nr
Match: XP_022987752.1 (uncharacterized protein LOC111485208 [Cucurbita maxima]) HSP 1 Score: 431.0 bits (1107), Expect = 4.3e-117 Identity = 267/412 (64.81%), Postives = 303/412 (73.54%), Query Frame = 0
BLAST of CsaV3_1G027870 vs. NCBI nr
Match: XP_023002875.1 (uncharacterized protein LOC111496608 [Cucurbita maxima]) HSP 1 Score: 422.5 bits (1085), Expect = 1.5e-114 Identity = 263/417 (63.07%), Postives = 298/417 (71.46%), Query Frame = 0
BLAST of CsaV3_1G027870 vs. TAIR10
Match: AT2G10950.1 (BSD domain-containing protein) HSP 1 Score: 133.7 bits (335), Expect = 2.6e-31 Identity = 96/249 (38.55%), Postives = 137/249 (55.02%), Query Frame = 0
BLAST of CsaV3_1G027870 vs. TAIR10
Match: AT5G65910.1 (BSD domain-containing protein) HSP 1 Score: 130.2 bits (326), Expect = 2.8e-30 Identity = 130/457 (28.45%), Postives = 198/457 (43.33%), Query Frame = 0
BLAST of CsaV3_1G027870 vs. TAIR10
Match: AT3G49800.1 (BSD domain-containing protein) HSP 1 Score: 107.5 bits (267), Expect = 2.0e-23 Identity = 111/386 (28.76%), Postives = 166/386 (43.01%), Query Frame = 0
BLAST of CsaV3_1G027870 vs. TAIR10
Match: AT1G10720.1 (BSD domain-containing protein) HSP 1 Score: 88.6 bits (218), Expect = 9.4e-18 Identity = 46/109 (42.20%), Postives = 73/109 (66.97%), Query Frame = 0
BLAST of CsaV3_1G027870 vs. TrEMBL
Match: tr|A0A0A0LYR6|A0A0A0LYR6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G226440 PE=4 SV=1) HSP 1 Score: 697.2 bits (1798), Expect = 2.1e-197 Identity = 392/392 (100.00%), Postives = 392/392 (100.00%), Query Frame = 0
BLAST of CsaV3_1G027870 vs. TrEMBL
Match: tr|A0A1S3B971|A0A1S3B971_CUCME (uncharacterized protein LOC103487415 OS=Cucumis melo OX=3656 GN=LOC103487415 PE=4 SV=1) HSP 1 Score: 609.0 bits (1569), Expect = 7.6e-171 Identity = 336/396 (84.85%), Postives = 352/396 (88.89%), Query Frame = 0
BLAST of CsaV3_1G027870 vs. TrEMBL
Match: tr|A0A067KEJ6|A0A067KEJ6_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_17026 PE=4 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 9.6e-57 Identity = 194/435 (44.60%), Postives = 249/435 (57.24%), Query Frame = 0
BLAST of CsaV3_1G027870 vs. TrEMBL
Match: tr|A0A2I4F4Z9|A0A2I4F4Z9_9ROSI (uncharacterized protein LOC108995594 OS=Juglans regia OX=51240 GN=LOC108995594 PE=4 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 1.4e-55 Identity = 161/392 (41.07%), Postives = 220/392 (56.12%), Query Frame = 0
BLAST of CsaV3_1G027870 vs. TrEMBL
Match: tr|V4UJK2|V4UJK2_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10008615mg PE=4 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 2.0e-54 Identity = 163/420 (38.81%), Postives = 220/420 (52.38%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |