Carg12109 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12109
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	BSD domain-containing protein, putative
Location	Cucurbita_argyrosperma_scaffold_054 : 95 .. 4794 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCGCAATATCTCGCAGAGATAAATACGGTATTATTGGCTGAGAAACGGACTTCTTACGATGCTATCTGTTTACGTAGCTAAAGCAACAAAAGCGTGGAGAGATTGTAGTTGCTTTCTAACTTGCTGCAATTTCAGAGTCGTTCTGATGATGATGAAGAAGATGAGGAATTCGAAGACGAGTGCGTTGATGATACGCCAGGAATTACGGATGAGGTTTTAAATTTCGTTAACGACATTTCTTTGCGGCCAGAGTACTGGACCGACTTTCCCTTGGCGCTTGTTGATACAGGTAACTGCAAGTTTTTTGCTATTCATATTTGTGATAAAACATATGTTCGGTATTTAATCATTGGCCAATGAATTTAGCATAAATAGAGATTAGGATAAAAACATTGTGCCTGCAAATTGCACACAATGTTCTTAAACTAGAGCCAGAAGTGATCATTATTCATTAGAATGCTTCGGTGCCGCGAGCAATAGTATTCTGCATTTTTTCTCCTCAATCGTCTGTGTTTTCTTTCCCTTTTTCTTTTATTATTTTTTCTCTGAGAATATTGAAGCCTAACGTACCAATATAATTTTGTTGGATGCTGAAATCGATCTAGTATTTGCGAGATTAGGCAGGTTGAAATCTATATATCTCGCAACTAGAGACTTGGACATACTGCCTTCAACAATAAATCAAGATCAAGAACTAAACCTGAAAAGAGAAAGCAAAGCTATATATTCTTTTCTCCATCTCTTTAGCTGATTGCTTTAATGCCATGGGGAAAATATATATAGTGTGCCAAAAAAATTGAACGAAGTTCGACCCCTAGTCTCTGTAAGTATTTACGCAGAGAAGTAGCGTGGGGCCGCCAAGAACCTGTGAGAAGTTTCGTTCGATAAAGATGAAGAATACACCTCCTCATATCACACAGATAGCTCTGTTCCATATCCCTGAATCGAACGGAGCTTAGTCCACAAACACTTTAATTTCTTGATACCCAAGACATAACCCATAAAGCCCTAGAATAGTCAACCTTGATTCTAATGGACTGCCCATCAATAACAACTAAACTCCTTCAAATACCAAATATGTTCCCAAAGTGCGTTTTATTCAATATAGTAAGTCACTCACATTCTTAATTACTTGTCAATTTTATCTCTCCGTATCGTTCGTTCCTGGGAATACTGCGGTCTGGGCTTCGCCGCAATGAGCGATCTCCGAGGACACCAATTTACTATGATAATGACACAGCTCCAAGAAAAAACTTTAAAAACAAAATATAAGAATCACAGAAATTTGAGTGAGGTAAACAGAAGTACATGTTTCTTGTTTGTTTTGCAATCCCAACACTCTCGCGCGGTCCCCCTATGTAGACGGACAGGCAGTCGTCTGGATAATCTCTAGGCTGTTCGTAAAATAAACCACTCAACAAAAATAGTGTGCCTGGCCCGCTCAAAATGCAGGAGGGTTCTTATTAACGATAGGATTACAATTAACTAAGATTCGTTTACCATCAAATTTATGTCTCAATGGAAGAATATTCCATAGTGATGTACAATCTATTACCTCTCTCGAATGTGAGAGTCATAACTTATATTTCCTGAGATGCCTTTAGCTGAGTCCTTGGCCGGCGTGATATCCAAACCTCAGTGGTGATTGAAGACATCTGATAATACTCACAATGGCAAATCGCTGAACCTGTATAGACTACCTGTAAATTTTCCTCTTGCTTACTTCTTCCCTCTCTCAATAACACCTCAACTTGATGAGCAGATTATAGAGAGATAAAATAGATTCCTATTAGATTTGGCTATGCCTTTCAAATCACGTAGAAAGATCAGAAAGCGTAAAGAAGAGAGTTTGCCTTCTAGGTCGAGCTCGAATTTCGGACATACCTGCTTTCTCCAAGAAGCACATCAGATCAAGAACTAAACCTGAAACAGAGATTCGGTAGCTAGCATGTCTTTTCTCCATCTGGTAGCTGATGCTGTGCATGGCGTAATAAATCTTCAGGTTGGAGTCATCTGTTTCTGCTTTTGTTTCTCATGCGTAATGTTCTTCTAGATGAAGAATACCTCTTATCCAAGTACTCTTCCATCTTATTAGCTTAATTGCGTATGATTTGAGCTAACCATTGGAAAATTTCCCCATATATGTTCTTTTATTCATCCATAAATAACAGTATGGTGCATCTGTCAACCCTTTAGGACACGGCAATACCTATTGAACCTCATTGCTAAAAAAAAAAAAAGTAGGTCAAGTACGTCTCCATTCATTGGTCCAACGACAGGCTCAGTCGTCTCTTATTTGGTTGTGTATAACAAAAAATTATTGAGATGGATTAAGAAATTTCACCATGTGAGCACAATGTATACCCATCTTCCTGTTAATGAGAATATTCCAAGTGATGATGACACTTTGATGTATACTGATTTCTGAGAGGTAAATGCATATGACTACTAGCTTTATCTGCAGATCCATGCTGTATATGTCTGACGTTCAAAGAATACACACTTCAACTGTTGAGCAATTGATTCCAAATATCTCAGCTCTTAAAATACAGCTTCAGAGTTCCATGAGCAACGAACGTTTCTGGATGATTTATTTTATATTGTTGCTTCCAAGATTCAACCAAGATGATTTTGAGCTTTTAGTAACCCCTGAGGTAAGACTTATTTACATTTTAAAATGTCACATTCTTCATTTTTTAGGTTGTTTGCAGATTATTATGAGTGATGCTTGCTGTTGCATTAAAGCCTAACTGGAATTGCTTTAGGATTTTTTTTAATCTTAAATTGATTTGGTTGCATTGACTTTTTTTTTCTTCATAATTTTGGATCTTCCTCTTCCGAGCTAGGAATCATCTTGTGGCTTTCTGTCTGCCTTTCTATCCCTATTCTGCAAGTTGGACGCCTTTACACATTTCTTGTTTTCAATATTTGCGTTCTGTGTGTTTAATGCATTTCAAGTTCATTGTCTGCTGACTGTTATGCTTACTATTAAAATGTTATTAACCTTCCCCTCTTTTCTTTCCATTAATATAGTGCAACTACATGCTAGAATTGTAGTCTTTTCATGCTATATTAATGGTAGATAATTTATATAACTTCGATGCGTTCCAGTCCTTTATTTGCTTCAAATTGAATATTGTTGGATATTGTCTGCCAATTGAATATTATTGGATATTGTCTGCCAATTGAATATTGATATGTATGCCAACGTATTTGTGATGGTTAGATCACCATAATCAAATTGCACCCACACGTGAGAGATCATAATGATAAGCCAAATTGAATTGATCCAAATTTAATGGTTAGGTTCGACCTTTTTGCTCTGTTGGTCTGATTTAGTTCAAATGTTTACAGAACTGATGATTATGTTTGGCTTCTTGCATAAGAAAAATGATAACGAATCTGTCCATTTAAAGATTAATATCATACAAATTTCAGTTTACTTAGAGGAACCGCATAGTGGAACTGAAAAAAATTGACCAGTTGGATTCAATCAAGTTATAGACTTGTTTGTGGTAAAATTCAGATGTAGTTTTCAGAAAAGTACCAAGGACGTAGGTTCAATTTAATTAGAGAGCGACAACCTTAATTACACTAATCCAGATTCTCTGCTGTTTCTGTTGGGATCTTATGCCTTTTTTTTTTCCCGTTTCAGTTGGGTTCTTCTTTGCCTATCTATAACGTTTAAGTAATTAACTTTGACCGAATGCATGATTGCAAATCTAATAACAAAATTCACTCAAACTCAAATTCCCACAATGAACATCTCTATTAACATGACTTTTACTTTAAGTTTCTGATTAATAGTGTGACATCTTTGTTCTTTTTTGGTAGATTGTCGAAGCAAGAAACCTACTTCTGGATAAATTTCAAAGAAAAGAGAAATCACAGGTGAACTCTGAGGATACTTGTGATAACAACAATTTAGTTTGTGGCACTCAAATGGGAAATATGCCATCTGAGGAAAAGGAAAACTCGACTCAAACCATTGAGGGAGGCGAAGGATTGGAAATTATGGATGGAGAGGAAGAGAATACCAATCACCAGTTGAAAATGGCAGATCCAAAAACTTCTGCCGATGTCAAAGAAAGGAGTGGTCTTGAAGGTACAATATCATTTAGTGAAATAGAGAATTATGGGACCGATTTGTCTGGAAAGTTCTCTGTAATAACCCCCCCAAGGACTTCTTCATCAACCGAGTCCAGTGATTGGGTTCATCTGCATGAAAATGCAGGCTCAAAGCTGGATCAGCAGCAGAGGACATGGAAGCAGGACACAGAGTCAGACGGTGGGGATTCAAGTGATTGGTTTAATGTGGATGAATTTGACTAAAAAGGTGGACGTAACCTCGTATTTCCCCAACCTCAACCCCCACTATTTTTTCCCCTAAAAAGTTCGAGTTTAATAAAAACGAAAAAACCCTTAGTTTGCCCTCTAGAGTAGAGTAGTTTCAAAGGAATAGGTCTTATTTATCTTCCACTTAGTTTCTTTAAAGGATAAATTTTGTGCATATGTTCTTTTCATAAGGTGTTGATATTCTAGTAGAGAATTTCTCTAGATGAGGTCGCTGATTTACGTTTTGGTTTCTATTTTTGAAAACTAGGCTTACGGTATCCATTTATTATTGCAATTTTTTTTTTCACTTCTTATAAAGTGCCTTTAAAATCTTGGGGATAAAAAGTCAAGATTAATTTGTAAT

mRNA sequence

TTCGCAATATCTCGCAGAGATAAATACGGTATTATTGGCTGAGAAACGGACTTCTTACGATGCTATCTGTTTACGTAGCTAAAGCAACAAAAGCGTGGAGAGATTGTAGTTGCTTTCTAACTTGCTGCAATTTCAGAGTCGTTCTGATGATGATGAAGAAGATGAGGAATTCGAAGACGAGTGCGTTGATGATACGCCAGGAATTACGGATGAGGTTTTAAATTTCGTTAACGACATTTCTTTGCGGCCAGAGTACTGGACCGACTTTCCCTTGGCGCTTGTTGATACAGATCCATGCTGTATATGTCTGACGTTCAAAGAATACACACTTCAACTGTTGAGCAATTGATTCCAAATATCTCAGCTCTTAAAATACAGCTTCAGAGTTCCATGAGCAACGAACGTTTCTGGATGATTTATTTTATATTGTTGCTTCCAAGATTCAACCAAGATGATTTTGAGCTTTTAGTAACCCCTGAGATTGTCGAAGCAAGAAACCTACTTCTGGATAAATTTCAAAGAAAAGAGAAATCACAGGTGAACTCTGAGGATACTTGTGATAACAACAATTTAGTTTGTGGCACTCAAATGGGAAATATGCCATCTGAGGAAAAGGAAAACTCGACTCAAACCATTGAGGGAGGCGAAGGATTGGAAATTATGGATGGAGAGGAAGAGAATACCAATCACCAGTTGAAAATGGCAGATCCAAAAACTTCTGCCGATGTCAAAGAAAGGAGTGGTCTTGAAGGTACAATATCATTTAGTGAAATAGAGAATTATGGGACCGATTTGTCTGGAAAGTTCTCTGTAATAACCCCCCCAAGGACTTCTTCATCAACCGAGTCCAGTGATTGGGTTCATCTGCATGAAAATGCAGGCTCAAAGCTGGATCAGCAGCAGAGGACATGGAAGCAGGACACAGAGTCAGACGGTGGGGATTCAAGTGATTGGTTTAATGTGGATGAATTTGACTAAAAAGGTGGACGTAACCTCGTATTTCCCCAACCTCAACCCCCACTATTTTTTCCCCTAAAAAGTTCGAGTTTAATAAAAACGAAAAAACCCTTAGTTTGCCCTCTAGAGTAGAGTAGTTTCAAAGGAATAGGTCTTATTTATCTTCCACTTAGTTTCTTTAAAGGATAAATTTTGTGCATATGTTCTTTTCATAAGGTGTTGATATTCTAGTAGAGAATTTCTCTAGATGAGGTCGCTGATTTACGTTTTGGTTTCTATTTTTGAAAACTAGGCTTACGGTATCCATTTATTATTGCAATTTTTTTTTTCACTTCTTATAAAGTGCCTTTAAAATCTTGGGGATAAAAAGTCAAGATTAATTTGTAAT

Coding sequence (CDS)

ATGCTGTATATGTCTGACGTTCAAAGAATACACACTTCAACTGTTGAGCAATTGATTCCAAATATCTCAGCTCTTAAAATACAGCTTCAGAGTTCCATGAGCAACGAACGTTTCTGGATGATTTATTTTATATTGTTGCTTCCAAGATTCAACCAAGATGATTTTGAGCTTTTAGTAACCCCTGAGATTGTCGAAGCAAGAAACCTACTTCTGGATAAATTTCAAAGAAAAGAGAAATCACAGGTGAACTCTGAGGATACTTGTGATAACAACAATTTAGTTTGTGGCACTCAAATGGGAAATATGCCATCTGAGGAAAAGGAAAACTCGACTCAAACCATTGAGGGAGGCGAAGGATTGGAAATTATGGATGGAGAGGAAGAGAATACCAATCACCAGTTGAAAATGGCAGATCCAAAAACTTCTGCCGATGTCAAAGAAAGGAGTGGTCTTGAAGGTACAATATCATTTAGTGAAATAGAGAATTATGGGACCGATTTGTCTGGAAAGTTCTCTGTAATAACCCCCCCAAGGACTTCTTCATCAACCGAGTCCAGTGATTGGGTTCATCTGCATGAAAATGCAGGCTCAAAGCTGGATCAGCAGCAGAGGACATGGAAGCAGGACACAGAGTCAGACGGTGGGGATTCAAGTGATTGGTTTAATGTGGATGAATTTGACTAA

Protein sequence

MLYMSDVQRIHTSTVEQLIPNISALKIQLQSSMSNERFWMIYFILLLPRFNQDDFELLVTPEIVEARNLLLDKFQRKEKSQVNSEDTCDNNNLVCGTQMGNMPSEEKENSTQTIEGGEGLEIMDGEEENTNHQLKMADPKTSADVKERSGLEGTISFSEIENYGTDLSGKFSVITPPRTSSSTESSDWVHLHENAGSKLDQQQRTWKQDTESDGGDSSDWFNVDEFD

Homology

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BLAST of Carg12109 vs. NCBI nr
Match: XP_022925051.1 (uncharacterized protein LOC111432412 [Cucurbita moschata])

HSP 1 Score: 438.3 bits (1126), Expect = 1.5e-119
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 4   MSDVQRIHTSTVEQLIPNISALKIQLQSSMSNERFWMIYFILLLPRFNQDDFELLVTPEI 63
           MSDVQRIHTSTVEQLIPNISALKIQLQSSMSNERFWMIYFILLLPRFNQDDFELLVTPEI
Sbjct: 188 MSDVQRIHTSTVEQLIPNISALKIQLQSSMSNERFWMIYFILLLPRFNQDDFELLVTPEI 247

Query: 64  VEARNLLLDKFQRKEKSQVNSEDTCDNNNLVCGTQMGNMPSEEKENSTQTIEGGEGLEIM 123
           VEARNLLLDKFQRKEKSQVNSEDTCDNNNLVCGTQMGNMPSEEKENSTQTIEGGEGLEIM
Sbjct: 248 VEARNLLLDKFQRKEKSQVNSEDTCDNNNLVCGTQMGNMPSEEKENSTQTIEGGEGLEIM 307

Query: 124 DGEEENTNHQLKMADPKTSADVKERSGLEGTISFSEIENYGTDLSGKFSVITPPRTSSST 183
           DGEEENTNHQLKMADPKTSADVKERSGLEGTISFSEIENYGTDLSGKFSVITPPRTSSST
Sbjct: 308 DGEEENTNHQLKMADPKTSADVKERSGLEGTISFSEIENYGTDLSGKFSVITPPRTSSST 367

Query: 184 ESSDWVHLHENAGSKLDQQQRTWKQDTESDGGDSSDWFNVDEFD 228
           ESSDWVHLHENAGSKLDQQQRTWKQDTESDGGDSSDWFNVDEFD
Sbjct: 368 ESSDWVHLHENAGSKLDQQQRTWKQDTESDGGDSSDWFNVDEFD 411

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BLAST of Carg12109 vs. NCBI nr
Match: XP_023530961.1 (uncharacterized protein LOC111793348 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 422.2 bits (1084), Expect = 1.1e-114
Identity = 217/224 (96.88%), Postives = 219/224 (97.77%), Query Frame = 0


Query: 4   MSDVQRIHTSTVEQLIPNISALKIQLQSSMSNERFWMIYFILLLPRFNQDDFELLVTPEI 63
           MSDVQRIHTSTVEQLIPNISALKIQLQSSMSNERFWMIYFILLLPRFN+DDFELL T EI
Sbjct: 188 MSDVQRIHTSTVEQLIPNISALKIQLQSSMSNERFWMIYFILLLPRFNKDDFELLETSEI 247

Query: 64  VEARNLLLDKFQRKEKSQVNSEDTCDNNNLVCGTQMGNMPSEEKENSTQTIEGGEGLEIM 123
           VEARNLLLDKFQRKEKSQVNSEDTCDNNNLVCGTQMGNMPSEEKE STQT EGGEGLEIM
Sbjct: 248 VEARNLLLDKFQRKEKSQVNSEDTCDNNNLVCGTQMGNMPSEEKEKSTQTTEGGEGLEIM 307

Query: 124 DGEEENTNHQLKMADPKTSADVKERSGLEGTISFSEIENYGTDLSGKFSVITPPRTSSST 183
           DGEEENTNHQLKMAD KTSADVKERSGLEGTISFSEIE+YGTDLSGKFSVITPPRTSSST
Sbjct: 308 DGEEENTNHQLKMADSKTSADVKERSGLEGTISFSEIEDYGTDLSGKFSVITPPRTSSST 367

Query: 184 ESSDWVHLHENAGSKLDQQQRTWKQDTESDGGDSSDWFNVDEFD 228
           ESSDWVHLHENAGSKLDQQQRTWKQDTESDGGDSSDWFNVDEFD
Sbjct: 368 ESSDWVHLHENAGSKLDQQQRTWKQDTESDGGDSSDWFNVDEFD 411

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BLAST of Carg12109 vs. NCBI nr
Match: XP_023002875.1 (uncharacterized protein LOC111496608 [Cucurbita maxima])

HSP 1 Score: 419.5 bits (1077), Expect = 7.4e-114
Identity = 217/225 (96.44%), Postives = 220/225 (97.78%), Query Frame = 0


Query: 4   MSDVQRIHTSTVEQLIPNISALKIQLQSSMSNERFWMIYFILLLPRFNQDDFELLVTPEI 63
           MSDVQ IHTSTVEQLIPNISALKIQLQSSMSNERFWMIYFILLLPRFN+DDFELL TPEI
Sbjct: 188 MSDVQSIHTSTVEQLIPNISALKIQLQSSMSNERFWMIYFILLLPRFNKDDFELLETPEI 247

Query: 64  VEARNLLLDKFQRKEKSQVNSEDTCDNNNLVCGTQMGNMPSEEKENSTQTIEGGEGLEIM 123
           +EARNLLLDKFQRKEKSQVNSEDTCDNNNLVCGTQMGNMPSEEKENSTQTIEGGEGL IM
Sbjct: 248 IEARNLLLDKFQRKEKSQVNSEDTCDNNNLVCGTQMGNMPSEEKENSTQTIEGGEGLGIM 307

Query: 124 DGEEENTNHQLKMADPKTSADVKERSGLEGTISFSEIENYGTDLSGKFSVITPPRTSSST 183
           DGEEENTNHQLKMAD KTSADVKERSGLEGTISFSEIE+YGTDLSGKFSVITPPRTSSST
Sbjct: 308 DGEEENTNHQLKMADSKTSADVKERSGLEGTISFSEIEDYGTDLSGKFSVITPPRTSSST 367

Query: 184 ESSDWVHLHENAGSKLD-QQQRTWKQDTESDGGDSSDWFNVDEFD 228
           ESSDWVHLHENAGSKLD QQQRTWKQDTESDGGDSSDWFNVDEFD
Sbjct: 368 ESSDWVHLHENAGSKLDQQQQRTWKQDTESDGGDSSDWFNVDEFD 412

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BLAST of Carg12109 vs. NCBI nr
Match: XP_022960748.1 (uncharacterized protein LOC111461455 [Cucurbita moschata])

HSP 1 Score: 257.7 bits (657), Expect = 3.7e-65
Identity = 149/225 (66.22%), Postives = 169/225 (75.11%), Query Frame = 0


Query: 4   MSDVQRIHTSTVEQLIPNISALKIQLQSSMSNERFWMIYFILLLPRFNQDDFELLVTPEI 63
           MS+VQR+H STVEQL+P+IS+LKI+LQS MSNE FWMIY+ILLLPRF+Q DFELL T EI
Sbjct: 188 MSEVQRMHISTVEQLVPSISSLKIKLQSFMSNELFWMIYYILLLPRFDQPDFELLATSEI 247

Query: 64  VEARNLLLDKFQRKEKSQVNSEDTCDNNNLVCGTQMGNMPSEEKENSTQTIEGGEGLEIM 123
           VEARN LLDK Q +  S+VNSEDTCD        Q GNM SEEK NS+Q IEGGEGLEI 
Sbjct: 248 VEARNTLLDKLQTQNTSRVNSEDTCDQ-------QKGNMASEEKANSSQIIEGGEGLEI- 307

Query: 124 DGEEENTNHQLKMADPKTSADVKERSGLEG-TISFSEIENYGTDLSGKFSVITPPRTSSS 183
               E TN  L+ AD KTS D K R  LEG + S S+IE  GTDL+G+     PPRTSSS
Sbjct: 308 ---GEKTNQGLEKADSKTSTDAKNRVRLEGISFSDSDIEGDGTDLAGR---TKPPRTSSS 367

Query: 184 TESSDWVHLHENAGSKLDQQQRTWKQDTESDGGDSSDWFNVDEFD 228
            ES+DWV LHEN   KLD QQ+ WKQD +S+GGDSSDWFNVDEFD
Sbjct: 368 AESNDWVQLHENPVPKLD-QQKAWKQDRDSEGGDSSDWFNVDEFD 397

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BLAST of Carg12109 vs. NCBI nr
Match: XP_022987752.1 (uncharacterized protein LOC111485208 [Cucurbita maxima])

HSP 1 Score: 251.9 bits (642), Expect = 2.0e-63
Identity = 149/227 (65.64%), Postives = 169/227 (74.45%), Query Frame = 0


Query: 4   MSDVQRIHTSTVEQLIPNISALKIQLQSSMSNERFWMIYFILLLPRFNQDDFELLVTPEI 63
           MS+VQR+H STVEQL+P+IS+LKI+LQS MSNE FWMIY+ILLLPRF+Q DFELL T EI
Sbjct: 189 MSEVQRMHISTVEQLVPSISSLKIKLQSFMSNELFWMIYYILLLPRFDQPDFELLATSEI 248

Query: 64  VEARNLLLDKFQRKEKSQVNSEDTCDNNNLVCGTQMGNMPSEEKENSTQTIEGGEGLEIM 123
           VEARN LLDK QR+  S+VNSEDTCD        Q GNM SEEK NS+Q IEGGEGLEI 
Sbjct: 249 VEARNTLLDKLQRQNTSRVNSEDTCDQ-------QKGNMASEEKANSSQIIEGGEGLEI- 308

Query: 124 DGEEENTNHQLKMADPKTSADVKERSGLEGTISFSEI---ENYGTDLSGKFSVITPPRTS 183
               E TN  L+ AD KTS D K+   LEG ISFS+    E  GTDL+G+     PPRTS
Sbjct: 309 ---GEKTNQGLEKADSKTSTDAKKGVRLEG-ISFSDSDIEEEDGTDLAGR---TKPPRTS 368

Query: 184 SSTESSDWVHLHENAGSKLDQQQRTWKQDTESDGGDSSDWFNVDEFD 228
           SS ES+DWV LHEN   KL  QQ+ WKQD +S+GGDSSDWFNVDEFD
Sbjct: 369 SSAESNDWVQLHENPVPKLG-QQKAWKQDRDSEGGDSSDWFNVDEFD 399

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BLAST of Carg12109 vs. TAIR10
Match: AT2G10950.1 (BSD domain-containing protein)

HSP 1 Score: 95.9 bits (237), Expect = 3.4e-20
Identity = 79/226 (34.96%), Postives = 115/226 (50.88%), Query Frame = 0


Query: 4   MSDVQRIHTSTVEQLIPNISALKIQLQSSMSNERFWMIYFILLLPRFNQDDFELLVTPEI 63
           +S+ QR H S +E L+P + A+K Q+ S M +E FW+IYFILL+PR N  DFELL T ++
Sbjct: 142 LSEAQRAHASAIEDLVPGLVAVKNQVSSYMDDEHFWLIYFILLMPRLNGHDFELLATCKV 201

Query: 64  VEARNLLLDKFQRKEKSQVNSEDTCDNNNLVCGTQMGNMPSEEKENSTQTIEGGEGLEIM 123
            E R+ LL K Q+KE     S            T     P E     T+T+EG     ++
Sbjct: 202 FETRDQLLLKLQKKETGSSKS------------TTGHETPEEGSSRETETVEG-----VI 261

Query: 124 DGEEENTNHQLKMADPKTSADVKERSGLEGTISFSEIENYGTDLSGKFSV--ITPPRTSS 183
           D  E     Q +++D ++S + +     E  ISFS+++    DLS K S    T  R +S
Sbjct: 262 DKIETLKIEQREISD-ESSEEQRRSFRDEEVISFSDLD--VDDLSEKPSPNRSTLKRPAS 321

Query: 184 STESSDWVHLHENAGSKLDQQQRTWKQDTESDGGDSSDWFNVDEFD 228
           +   S WV        +L + Q    +D+E   GDSSDW  + + D
Sbjct: 322 NASGSSWV--------QLSKSQVGHSKDSE---GDSSDWLPIGDSD 336

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BLAST of Carg12109 vs. TAIR10
Match: AT1G10720.1 (BSD domain-containing protein)

HSP 1 Score: 67.0 bits (162), Expect = 1.7e-11
Identity = 37/86 (43.02%), Postives = 53/86 (61.63%), Query Frame = 0


Query: 2   LYMSDVQRIHTSTVEQLIPNISALKIQL-QSSMSNERFWMIYFILLLPRFNQDDFELLVT 61
           L MSD QR H   +E+L P ++AL+I+L    MS   FW +YF+LLL R N+ D  LL +
Sbjct: 207 LEMSDAQRGHALAIERLAPRLAALRIELCPCHMSVGYFWKVYFVLLLSRLNKHDAHLLSS 266

Query: 62  PEIVEARNLLLDKFQRKEKSQVNSED 87
           P+++EAR L + + Q +  S   S D
Sbjct: 267 PQVMEARALWMKELQNQTHSSKESRD 292

[Close]

BLAST of Carg12109 vs. TAIR10
Match: AT5G65910.1 (BSD domain-containing protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.6e-09
Identity = 32/92 (34.78%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 4   MSDVQRIHTSTVEQLIPNISALKIQL-QSSMSNERFWMIYFILLLPRFNQDDFELLVTPE 63
           ++D Q  H   VE+L P++++L+I+L    M+   FW IYF+L+ P+ ++D   LL TP+
Sbjct: 180 LADAQYEHALAVERLAPSLASLRIELCPEYMTENCFWRIYFVLVHPKLSKDHALLLSTPQ 239

Query: 64  IVEARNLLLDKFQRKEKSQVNSEDTCDNNNLV 95
           ++EAR++L  + Q++ K  V +  +  N  +V
Sbjct: 240 VLEARSMLSQELQKRSKLPVEAGSSEANTVIV 271

[Close]

BLAST of Carg12109 vs. TAIR10
Match: AT3G49800.1 (BSD domain-containing protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.6e-06
Identity = 47/153 (30.72%), Postives = 73/153 (47.71%), Query Frame = 0


Query: 4   MSDVQRIHTSTVEQLIPNISALKIQL-QSSMSNERFWMIYFILLLPRFNQDDFELLVTPE 63
           M+D Q  H   VE L  +++AL+I+L  + MS   FW IYF+L+ P F++ D   L TP+
Sbjct: 200 MTDAQYEHALAVENLASSLAALRIELCPAYMSEYCFWRIYFVLVHPIFSKHDALTLSTPQ 259

Query: 64  IVEARNLLLDKFQRKEKSQV-----NSEDTCDNNNLVCGTQMGN--MPSEEKENSTQTIE 123
           ++E+R LL  +  RK          +S+   D+ N+    Q  N    SE +   T T+E
Sbjct: 260 VLESRALLSHELLRKRNKDTVVVPESSDRGADSENVEPLFQPTNPSPKSEPEPVKTITVE 319

Query: 124 GGEGLEIMDGEEENTNHQLKMADPKTSADVKER 149
                E  + E E    + K         ++ER
Sbjct: 320 TIHSAERSEFETEKHTVETKEVQVVDKPVIEER 352

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BLAST of Carg12109 vs. TrEMBL
Match: tr|A0A1S3B971|A0A1S3B971_CUCME (uncharacterized protein LOC103487415 OS=Cucumis melo OX=3656 GN=LOC103487415 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.5e-54
Identity = 138/226 (61.06%), Postives = 154/226 (68.14%), Query Frame = 0


Query: 4   MSDVQRIHTSTVEQLIPNISALKIQLQSSMSNERFWMIYFILLLPRFNQDDFELLVTPEI 63
           MSDVQR+H STVEQL+P+I+ALKI+LQS MSN  FWMIYFILLLPRF+  DFELL T EI
Sbjct: 195 MSDVQRMHISTVEQLVPSITALKIKLQSFMSNGIFWMIYFILLLPRFDPPDFELLATSEI 254

Query: 64  VEARNLLLDKFQRKEKSQVNSEDTCDNNNLVCGTQM--GNMPSEEKENSTQTIEGGEGLE 123
           VEARN+LLDKFQRKEK QVNSED+CD NNLVCGTQ    NM SEEK NS QT+   EGLE
Sbjct: 255 VEARNILLDKFQRKEKQQVNSEDSCD-NNLVCGTQQKEENMVSEEKPNSAQTV---EGLE 314

Query: 124 IMDGEEENTNHQLKMADPKTSADVKERSGLEGTISFSEIENYGTDLSGKFSVITPPRTSS 183
             DG   NTN QL  AD +     KER      +SFS+IE    + S         R SS
Sbjct: 315 TEDGVGGNTNQQLAKADSEIYKAAKERVIRVEDVSFSDIEEEDGERSHS------RRISS 374

Query: 184 STESSDWVHLHENAGSKLDQQQRTWKQDTESDGGDSSDWFNVDEFD 228
           STESSDWV LHE+  SK              +GGDSSDWF+VDEFD
Sbjct: 375 STESSDWVQLHESQDSK--------------EGGDSSDWFDVDEFD 396

[Close]

BLAST of Carg12109 vs. TrEMBL
Match: tr|A0A0A0LYR6|A0A0A0LYR6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G226440 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 4.1e-52
Identity = 134/226 (59.29%), Postives = 152/226 (67.26%), Query Frame = 0


Query: 4   MSDVQRIHTSTVEQLIPNISALKIQLQSSMSNERFWMIYFILLLPRFNQDDFELLVTPEI 63
           MSDVQRIH STVEQL+P+ISALKI+LQS MSNE FWMIYFILLLPRFNQ DFELL T EI
Sbjct: 191 MSDVQRIHISTVEQLVPSISALKIKLQSFMSNEIFWMIYFILLLPRFNQSDFELLATSEI 250

Query: 64  VEARNLLLDKFQRKEKSQVNSEDTCDNNNLVCGTQM--GNMPSEEKENSTQTIEGGEGLE 123
           VEARN+LLDK QRKEK QVNSE++ D NN+VC TQ    N  SEEK NSTQ I   EGLE
Sbjct: 251 VEARNILLDKLQRKEKPQVNSENSYD-NNVVCDTQQKEENTVSEEKRNSTQII---EGLE 310

Query: 124 IMDGEEENTNHQLKMADPKTSADVKERSGLEGTISFSEIENYGTDLSGKFSVITPPRTSS 183
             DG+  NTN +L   D +     K+R      +SFS+IE    + +         R SS
Sbjct: 311 TEDGDRGNTNQRLAKRDSEIYKAAKKRVIRVEDVSFSDIEEEDDERNHS------QRISS 370

Query: 184 STESSDWVHLHENAGSKLDQQQRTWKQDTESDGGDSSDWFNVDEFD 228
           STESSDWV LHE+  SK              +GGDSSDWF+VDEFD
Sbjct: 371 STESSDWVQLHESQDSK--------------EGGDSSDWFDVDEFD 392

[Close]

BLAST of Carg12109 vs. TrEMBL
Match: tr|V4UJK2|V4UJK2_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10008615mg PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.0e-30
Identity = 96/234 (41.03%), Postives = 137/234 (58.55%), Query Frame = 0


Query: 4   MSDVQRIHTSTVEQLIPNISALKIQLQSSMSNERFWMIYFILLLPRFNQDDFELLVTPEI 63
           MSD QR H  +VE+L+P+ + L+I L+  + + RFWMIYFILLLPR N++DFELL TP+I
Sbjct: 156 MSDAQREHAFSVERLVPSFTDLRISLRPHLGDNRFWMIYFILLLPRLNEEDFELLSTPKI 215

Query: 64  VEARNLLLDKFQRKEKSQV--NSEDTCDNNNLVCGTQMGNMPSEEKENSTQTIEGGEGLE 123
           +  RN LL K Q     QV  N+ D    ++ + GTQ  N+ S EK+  T+ +   + LE
Sbjct: 216 IATRNTLLQKLQTTRNVQVGNNTSDASQKSSEIGGTQEENIGSREKD-VTKIVNATKDLE 275

Query: 124 IMDGEEENTNHQLKMADPKTSADVKERSGL--EGTISFSEIENYGTDLSGKFSV---ITP 183
           I D  EENT   L+  D  T   V  R  +  E  +SFS++E+   D  G+ S       
Sbjct: 276 IED--EENTEQWLEEDDTDTGFSVSTRKEIHHEEDVSFSDLEDESNDRPGRLSARRSAEG 335

Query: 184 PRTSSSTESSDWVHLHENAGSKLDQQ---QRTWKQDTESDGGDSSDWFNVDEFD 228
            +  S + SSDWV LHE++  + D +   + T  +D +S+ G+SSDW  VD+FD
Sbjct: 336 TKAISPSGSSDWVQLHESSMHRGDLERACRSTTSRDKDSE-GESSDWLAVDDFD 385

[Close]

BLAST of Carg12109 vs. TrEMBL
Match: tr|A0A061GVR9|A0A061GVR9_THECC (BSD domain-containing protein, putative OS=Theobroma cacao OX=3641 GN=TCM_038160 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 6.4e-29
Identity = 93/232 (40.09%), Postives = 134/232 (57.76%), Query Frame = 0


Query: 4   MSDVQRIHTSTVEQLIPNISALKIQLQSSMSNERFWMIYFILLLPRFNQDDFELLVTPEI 63
           MS+ QR H   +E L+P+   LK+ L S M +ERFWMIYFILLLPR N+ DFELL TPE+
Sbjct: 179 MSEAQREHAENIEHLVPSFEDLKVNLHSHMGDERFWMIYFILLLPRLNEHDFELLSTPEV 238

Query: 64  VEARNLLLDKFQRKEKSQV--NSEDTCDNNNLVCGTQMGNMPSEEKENSTQTIEGGEGLE 123
           V+ R+ LL K Q    ++V  +S D  + ++ V  T+  N  SEEK      I   EGLE
Sbjct: 239 VKTRDALLQKLQNNNNARVANSSLDASEESSEVSETKRENASSEEK---VSEIVNAEGLE 298

Query: 124 IMDGEEENTNHQLKMADPKTSADVKERSGLEG--TISFSEIENYGTDLSGKFSVITPP-- 183
           I D  EEN    L+  D  + + V  +  LE    +SFS++E+    LS K SV      
Sbjct: 299 ITD--EENAGQWLEEGDISSGSCVSVKKNLEDEEDVSFSDLEDDDNYLSNKVSVPKSKQD 358

Query: 184 -RTSSSTESSDWVHLHENAGSK--LDQQQRTWKQDTESDGGDSSDWFNVDEF 227
            + SS + S+DWV L+++  ++  L +  ++  +D ES+G +S+DW   D+F
Sbjct: 359 IKASSPSGSNDWVQLNKSPETRGGLQKAGQSNSRDKESEGEESNDWLTDDDF 405

[Close]

BLAST of Carg12109 vs. TrEMBL
Match: tr|A0A067G1I1|A0A067G1I1_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g016640mg PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 6.4e-29
Identity = 94/234 (40.17%), Postives = 136/234 (58.12%), Query Frame = 0


Query: 4   MSDVQRIHTSTVEQLIPNISALKIQLQSSMSNERFWMIYFILLLPRFNQDDFELLVTPEI 63
           MSD QR H  +VE+L+P+ + L+I L+  + + RFWMIYFILLLPR N++DFELL TP+I
Sbjct: 156 MSDAQREHAFSVERLVPSFTDLRISLRPHLGDNRFWMIYFILLLPRLNEEDFELLSTPKI 215

Query: 64  VEARNLLLDKFQRKEKSQV--NSEDTCDNNNLVCGTQMGNMPSEEKENSTQTIEGGEGLE 123
           +  RN+LL K Q     QV  N+ D    ++ +  TQ  N+ S EK+  T+ +   + LE
Sbjct: 216 IATRNMLLQKLQTTRNVQVGNNTSDASQKSSEIGETQEENIGSREKD-VTKIVNATKDLE 275

Query: 124 IMDGEEENTNHQLKMADPKTSADVKERSGL--EGTISFSEIENYGTDLSGKFSV---ITP 183
           I D  EENT   L+  D  T   V  R  +  E  +SFS++E+   D  G+ S       
Sbjct: 276 IED--EENTEQWLEEDDTDTGFSVSTRKEIHHEEDVSFSDLEDESNDRPGRLSARRSAEG 335

Query: 184 PRTSSSTESSDWVHLHENAGSKLDQQ---QRTWKQDTESDGGDSSDWFNVDEFD 228
            +  S + SSDWV L E++  + D +   + T  +D +S+ G+SSDW  VD+FD
Sbjct: 336 TKAISPSGSSDWVQLQESSMHRGDLERACRSTTSRDKDSE-GESSDWLAVDDFD 385

The following BLAST results are available for this feature:

BLAST of Carg12109 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925051.1	1.5e-119	100.00	uncharacterized protein LOC111432412 [Cucurbita moschata]	[more]
XP_023530961.1	1.1e-114	96.88	uncharacterized protein LOC111793348 [Cucurbita pepo subsp. pepo]	[more]
XP_023002875.1	7.4e-114	96.44	uncharacterized protein LOC111496608 [Cucurbita maxima]	[more]
XP_022960748.1	3.7e-65	66.22	uncharacterized protein LOC111461455 [Cucurbita moschata]	[more]
XP_022987752.1	2.0e-63	65.64	uncharacterized protein LOC111485208 [Cucurbita maxima]	[more]

BLAST of Carg12109 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G10950.1	3.4e-20	34.96	BSD domain-containing protein	[more]
AT1G10720.1	1.7e-11	43.02	BSD domain-containing protein	[more]
AT5G65910.1	1.6e-09	34.78	BSD domain-containing protein	[more]
AT3G49800.1	1.6e-06	30.72	BSD domain-containing protein	[more]

BLAST of Carg12109 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg12109 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B971\|A0A1S3B971_CUCME	1.5e-54	61.06	uncharacterized protein LOC103487415 OS=Cucumis melo OX=3656 GN=LOC103487415 PE=...	[more]
tr\|A0A0A0LYR6\|A0A0A0LYR6_CUCSA	4.1e-52	59.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G226440 PE=4 SV=1	[more]
tr\|V4UJK2\|V4UJK2_9ROSI	2.0e-30	41.03	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10008615mg PE=4 ...	[more]
tr\|A0A061GVR9\|A0A061GVR9_THECC	6.4e-29	40.09	BSD domain-containing protein, putative OS=Theobroma cacao OX=3641 GN=TCM_038160...	[more]
tr\|A0A067G1I1\|A0A067G1I1_CITSI	6.4e-29	40.17	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g016640mg PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12109-RA	Carg12109-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..227
None	No IPR available	PANTHER	PTHR31923	FAMILY NOT NAMED	coord: 4..194
None	No IPR available	PANTHER	PTHR31923:SF9	BSD DOMAIN-CONTAINING PROTEIN	coord: 4..194

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12109	Cla012203	Watermelon (97103) v1	carwmB0042
Carg12109	Csa1G226440	Cucumber (Chinese Long) v2	carcuB0035
Carg12109	MELO3C010307	Melon (DHL92) v3.5.1	carmeB0035
Carg12109	ClCG06G011570	Watermelon (Charleston Gray)	carwcgB0043
Carg12109	CSPI01G16630	Wild cucumber (PI 183967)	carcpiB0037
Carg12109	CmaCh10G005230	Cucurbita maxima (Rimu)	carcmaB0044
Carg12109	CmaCh11G005200	Cucurbita maxima (Rimu)	carcmaB0047
Carg12109	CmoCh10G005580	Cucurbita moschata (Rifu)	carcmoB0047
Carg12109	CmoCh11G005180	Cucurbita moschata (Rifu)	carcmoB0050
Carg12109	Lsi06G010060	Bottle gourd (USVL1VR-Ls)	carlsiB037
Carg12109	Cp4.1LG04g09300	Cucurbita pepo (Zucchini)	carcpeB0054
Carg12109	Cp4.1LG18g05150	Cucurbita pepo (Zucchini)	carcpeB0053
Carg12109	CsGy1G017110	Cucumber (Gy14) v2	carcgybB0040
Carg12109	MELO3C010307.2	Melon (DHL92) v3.6.1	carmedB0036
Carg12109	CsaV3_1G027870	Cucumber (Chinese Long) v3	carcucB0042
Carg12109	Cla97C06G120700	Watermelon (97103) v2	carwmbB0037
Carg12109	Bhi02G000783	Wax gourd	carwgoB0043

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg12109	Carg09942	Silver-seed gourd	carcarB041

The following block(s) are covering this gene:

None