CsaV3_1G000230 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G000230
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUbiquitin-conjugating enzyme E2, putative
Locationchr1 : 152752 .. 156335 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AACAATCTCTTCAATTAAGACCCAATAATAAATGTAGAGAGAATTGGAAGAGAGAGAGAGAGAGTGGTAGTGGGGTCGGTAGGGATGGCATAATTCTGTGAGACGGAAAGAAAGAAAGAAAGAAAGGAGAGAGTGAAAGCGAAAGGGTTTTCGCTTCTCCAATCTCCAACCTTGGCCAAAGTTTTCCTTTGGATTCGTCTTCCTTCATCACACACACTTTTAGGGTTCCTTCTCTTCTTCCCATTTGTCCGATCATCATCACTCACTCACCATCCACGAAGATGATAGACTTCGCTCGGGTGCAAAAGGAGCTCCAAGAATGCACTAAAGACATTGAGGCTTCTGGTATTAGAGTCACCCCCAAATCCGATAGTCTTTCCCATTTGCTCGGCACCATTCCTGGTCCTATCTCTACTCCGTACGAAGGTGGCATTTTCCAAATTGACATTACATTACCAGGTCCCCTCCTATTGCTCCTTACTCTTCTTCTACCTCATCATTAATATATCTGCCTTCTTATCTTCAGCCATTAGGGCTACACGATCTATGATTCGATGAGTCGGGGATTTGCGTTTGAAATTTCCTTACACAATTTCATGACATGACATCTTTTGAAGTGTTAACAGTCCACGCTAGTTTTAGAAGGTTTTTTTTTTTTTTTTTCTTTGAAGTTTCTCCTATCCTTTCTCAACTTTTGTTTTGTCAAAAACTAAAGTAAAACCCAAGCCCTTGAGCATTATTTTTTTAACTCCCAATTAATGATTGAGAGCTTTTTTAAGTTTTATTGAACTTGTTTATTCAACAATCTTGTTACCCATTTGCGGCATGAACAAAACCATTTCCCAATAAGAGCTTTGTGGAAAGAACCTTTCCTTGCTCTGTTGAAATTTTATGGTAAAAGATTGTAACTTGTCCATGTCTCTTCCAAGCATCTTATCATGTTCCCTGAGTATCAATAACATATATTTACCATATTTCCATATATTGATGGCGAAGGAAATTCCTCTTTAAGTAATATAATGCGTTAACTGAATGCCACAGAAAGCTTACAGCTCTGAATTAGCAATCAAATAACAATTGTAGCAGAAATAAAGTCAATTGACAAATTACATTTATTATCGTAATATCCTCGATGGACTATGGAGATTAAAAACTCTCATCTTGACCGAAAACCTTGAAGAACAGGGACGACATAGCCATGGTGAAAATGTCAGTGAGTTGAGATGAAGATTTAACCGGTAAAAGCTTCAAAGAACCACGTAAAATCATGTTCTGAACAATGTAGCAATCAATTTTGATATGGTTTGTTCGTACATGAAACGTTGGATTGGAAGCAATGACTATCACAACTTGATTATCACAATACACCAAAGCTGGAGCTAAAAGAGAGACCTTCAAATTGGAAAATAGACTACCAATTCATGTTAGCTTATGGGAAAACTTGCCAATGCTCGGTATTCAGCTTCATCAGAAGAGTGCAAAATAGTAGCTCATTTTTGTATTTCCCATGCAACCATTGTATTGCCTAAAAAGATGCAAAAACCAGTGATAGATCTTTGAGTATCAGTACATGATCTCCAATCAGAGTCAACAAACGCTTTTAACCAAAATTTGGTTGTTGGTTTAATGAGGATTCCTCGCCCAGTAGTTCAGTTTGGGTACCAAAAAAGGTGATGAGTAGGCATCAAATGATCTGTATAAGGCTTGGAAATGAATTGACTTAGTTAATTGACTGCAAAAGCAATGTTTGGTCGAGATGTCTGAAAATATAAACAATTGACCAGCTAATTGCTAGTAATGAGAAGAGTCCTCTGAAGAAACAGAGTTCCCGATTGAGCAGTCAATTTTAGATTGGGACAATTTACTGGTTTAGAGGCAAAAAATCAGAATCTTCTACCATCTGCAAGCACCATTTTCGTTGAGATAGGGATAATCCTTGTGAAGATCTTGACAATTCCAATCTTAAAGAAAGATCGAGCATCACCAAAATCTTTAAGAAGAAAATGAGAGCACTAGAAACTTTTGACTGAAGCAATTTCAGAAAATATAAACAATTGACCAGCTAATTGCTAGTAATGAGAAGGTCCTCTGAAGAAACAGAGTACCCGATTGAGCAGTCAATTTTAGATTGGGACAACTTACTGGTTTAGAGGCAAAAAATCAGAATCTTCTACCATCTGCAAGCACCATTTTCGTTGAGATAGGGATAATCCTTGTGAAGATCTTGACAACTCCAAGCTTAAAGAAAGATCGAGCATCACCCAAATCTTTAAGAAGAAAATGAGAGCGCTAGAAACTTTTGACTGGAGCAATTTCATGGGGTGATGGTTCACTGAGTAGTATATCATCCACATGTACTAATAGGGCAACAAAACTTGAGCCATGGCCTTTGTGAATAATGAGTAGTTAGCTTTTTAGACTGAGTAAACCAATGAGATATCAATATAAAGACCGTGGGAAACTTGCTGAAGTTCCACATGCCAAGCACAGTTTCAAAACACTGCCTTATCTAACCCTTAGCATGTATCTTAGACATGGTTTTTTTCTTTTTCCCTTGCAGATGGGTATCCATTTGAGCCTCCCAAAATGCAGTTTGCTACAAAAGTCTGGTAAGGACCACCTCCTTTCTTATTTACATTTGCTGAGCAGTCAATCTTGATATCTCTTATGTATGCATTAAGTGCTTTCATGTTTAGTGGATGGAGTTACTTTTCAGAGAGCATGTGTGTTTACAATGCTTATATGTATGTATATTTTGATGGAATCAAATAACATATATATATAAATTTTAACCGTAAGGGAACTTCATGGTATTGGCTTAGTTCAACATATGTGAACAAGGTTATGTGTAACTATGGAGTTTGGTCTATTATGTTTTGAAGGCACCCTAATATTAGTAGTCAAAGTGGTGCAATTTGCCTGGACATTTTGAAGGATCAGTGGAGCCCAGCACTTACGTTGAAGACAGCCCTGCTCTCTGTGCAGGCACTGCTGTCTGCTCCTCAGCCTGATGATCCTCAAGATGCTGTCGTGGCACAACAGGTATTGTCAGCTCTATCTTGAATGCATGGATGTTCGTTCTTTTTGTCTTTGGATATTGGTATTGAGGATGTCAACTTTAAATTGTATCAATTTTTTTTAACAATATGTATTGCTGCAGTATCTTAGAGACTACCAGACTTTTGCTGGCACAGCTCGATATTGGACAGAAACTTTTGCCAAGACGTCATCTCTTGGGGTGGAAGAAAAGGTTAAAGCCTTAACTTTGGTTTTGCATGTTGTGTGAATGATAAATCATATATAGTTTTGAGTTTGAGGAGTAGTTGGAATGAAAGCATGCGTGTGTGGTTTGTGTGTCAACTGAAGATTGATGTGAAGGAAATGGTGCAGGTTCAGAAACTCATGGAGATGGGATTCCCCGAGGCTCAAGTAAGGAGCAGTTTGGAAGCTGTGGGTTGGGATGAAAATTTGGCTTTGGAAAAACTCTGCTCCGGCTAGAGTCTCACTCCTTTGCCACCCGCCGAACATAGGAGTATATATTGATCCAAAGGGTCGTATCTATAGTATATAGCCCCTTTTTTTTT

mRNA sequence

ATGATAGACTTCGCTCGGGTGCAAAAGGAGCTCCAAGAATGCACTAAAGACATTGAGGCTTCTGGTATTAGAGTCACCCCCAAATCCGATAGTCTTTCCCATTTGCTCGGCACCATTCCTGGTCCTATCTCTACTCCGTACGAAGGTGGCATTTTCCAAATTGACATTACATTACCAGATGGGTATCCATTTGAGCCTCCCAAAATGCAGTTTGCTACAAAAGTCTGGCACCCTAATATTAGTAGTCAAAGTGGTGCAATTTGCCTGGACATTTTGAAGGATCAGTGGAGCCCAGCACTTACGTTGAAGACAGCCCTGCTCTCTGTGCAGGCACTGCTGTCTGCTCCTCAGCCTGATGATCCTCAAGATGCTGTCGTGGCACAACAGTATCTTAGAGACTACCAGACTTTTGCTGGCACAGCTCGATATTGGACAGAAACTTTTGCCAAGACGTCATCTCTTGGGGTGGAAGAAAAGGTTCAGAAACTCATGGAGATGGGATTCCCCGAGGCTCAAGTAAGGAGCAGTTTGGAAGCTGTGGGTTGGGATGAAAATTTGGCTTTGGAAAAACTCTGCTCCGGCTAG

Coding sequence (CDS)

ATGATAGACTTCGCTCGGGTGCAAAAGGAGCTCCAAGAATGCACTAAAGACATTGAGGCTTCTGGTATTAGAGTCACCCCCAAATCCGATAGTCTTTCCCATTTGCTCGGCACCATTCCTGGTCCTATCTCTACTCCGTACGAAGGTGGCATTTTCCAAATTGACATTACATTACCAGATGGGTATCCATTTGAGCCTCCCAAAATGCAGTTTGCTACAAAAGTCTGGCACCCTAATATTAGTAGTCAAAGTGGTGCAATTTGCCTGGACATTTTGAAGGATCAGTGGAGCCCAGCACTTACGTTGAAGACAGCCCTGCTCTCTGTGCAGGCACTGCTGTCTGCTCCTCAGCCTGATGATCCTCAAGATGCTGTCGTGGCACAACAGTATCTTAGAGACTACCAGACTTTTGCTGGCACAGCTCGATATTGGACAGAAACTTTTGCCAAGACGTCATCTCTTGGGGTGGAAGAAAAGGTTCAGAAACTCATGGAGATGGGATTCCCCGAGGCTCAAGTAAGGAGCAGTTTGGAAGCTGTGGGTTGGGATGAAAATTTGGCTTTGGAAAAACTCTGCTCCGGCTAG

Protein sequence

MIDFARVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLMEMGFPEAQVRSSLEAVGWDENLALEKLCSG
Homology
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BLAST of CsaV3_1G000230 vs. NCBI nr
Match: XP_004138029.1 (PREDICTED: ubiquitin-conjugating enzyme E2 27 [Cucumis sativus] >KGN63451.1 hypothetical protein Csa_1G000740 [Cucumis sativus])

HSP 1 Score: 393.7 bits (1010), Expect = 3.7e-106
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0 

Query: 1   MIDFARVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPD 60
           MIDFARVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPD
Sbjct: 1   MIDFARVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPD 60

Query: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 120
           GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD
Sbjct: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 120

Query: 121 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLMEMGFPEAQVRSSLEAV 180
           PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLMEMGFPEAQVRSSLEAV
Sbjct: 121 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLMEMGFPEAQVRSSLEAV 180

Query: 181 GWDENLALEKLCSG 195
           GWDENLALEKLCSG
Sbjct: 181 GWDENLALEKLCSG 194

[Close]
BLAST of CsaV3_1G000230 vs. NCBI nr
Match: XP_008464378.1 (PREDICTED: ubiquitin-conjugating enzyme E2 27 [Cucumis melo])

HSP 1 Score: 391.7 bits (1005), Expect = 1.4e-105
Identity = 193/194 (99.48%), Postives = 193/194 (99.48%), Query Frame = 0 

Query: 1   MIDFARVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPD 60
           MIDFARVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGG FQIDITLPD
Sbjct: 1   MIDFARVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGTFQIDITLPD 60

Query: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 120
           GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD
Sbjct: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 120

Query: 121 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLMEMGFPEAQVRSSLEAV 180
           PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLMEMGFPEAQVRSSLEAV
Sbjct: 121 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLMEMGFPEAQVRSSLEAV 180

Query: 181 GWDENLALEKLCSG 195
           GWDENLALEKLCSG
Sbjct: 181 GWDENLALEKLCSG 194

[Close]
BLAST of CsaV3_1G000230 vs. NCBI nr
Match: XP_022921627.1 (ubiquitin-conjugating enzyme E2 27 [Cucurbita moschata] >XP_022921628.1 ubiquitin-conjugating enzyme E2 27 [Cucurbita moschata])

HSP 1 Score: 385.2 bits (988), Expect = 1.3e-103
Identity = 187/194 (96.39%), Postives = 193/194 (99.48%), Query Frame = 0 

Query: 1   MIDFARVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPD 60
           M+DFARVQKELQECTKDIEASGIRVTPK+D+LSHLLGTIPGP++TPYEGG FQIDITLPD
Sbjct: 8   MMDFARVQKELQECTKDIEASGIRVTPKADNLSHLLGTIPGPVATPYEGGTFQIDITLPD 67

Query: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 120
           GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD
Sbjct: 68  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 127

Query: 121 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLMEMGFPEAQVRSSLEAV 180
           PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKL+EMGFPEAQVRSSLEAV
Sbjct: 128 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAV 187

Query: 181 GWDENLALEKLCSG 195
           GWDENLALEKLCSG
Sbjct: 188 GWDENLALEKLCSG 201

[Close]
BLAST of CsaV3_1G000230 vs. NCBI nr
Match: XP_023515392.1 (ubiquitin-conjugating enzyme E2 27 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384.4 bits (986), Expect = 2.3e-103
Identity = 186/194 (95.88%), Postives = 193/194 (99.48%), Query Frame = 0 

Query: 1   MIDFARVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPD 60
           M+DFARVQKELQECTKDIEASGIRVTPK+D+LSHL+GTIPGP++TPYEGG FQIDITLPD
Sbjct: 8   MMDFARVQKELQECTKDIEASGIRVTPKADNLSHLIGTIPGPVATPYEGGTFQIDITLPD 67

Query: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 120
           GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD
Sbjct: 68  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 127

Query: 121 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLMEMGFPEAQVRSSLEAV 180
           PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKL+EMGFPEAQVRSSLEAV
Sbjct: 128 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAV 187

Query: 181 GWDENLALEKLCSG 195
           GWDENLALEKLCSG
Sbjct: 188 GWDENLALEKLCSG 201

[Close]
BLAST of CsaV3_1G000230 vs. NCBI nr
Match: XP_022988308.1 (ubiquitin-conjugating enzyme E2 27 [Cucurbita maxima])

HSP 1 Score: 383.6 bits (984), Expect = 3.9e-103
Identity = 186/194 (95.88%), Postives = 193/194 (99.48%), Query Frame = 0 

Query: 1   MIDFARVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPD 60
           M+DFARVQKELQEC+KDIEASGIRVTPK+D+LSHLLGTIPGP++TPYEGG FQIDITLPD
Sbjct: 8   MMDFARVQKELQECSKDIEASGIRVTPKADNLSHLLGTIPGPVATPYEGGTFQIDITLPD 67

Query: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 120
           GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD
Sbjct: 68  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 127

Query: 121 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLMEMGFPEAQVRSSLEAV 180
           PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKL+EMGFPEAQVRSSLEAV
Sbjct: 128 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAV 187

Query: 181 GWDENLALEKLCSG 195
           GWDENLALEKLCSG
Sbjct: 188 GWDENLALEKLCSG 201

[Close]
BLAST of CsaV3_1G000230 vs. TAIR10
Match: AT5G50870.2 (ubiquitin-conjugating enzyme 27)

HSP 1 Score: 308.1 bits (788), Expect = 3.8e-84
Identity = 151/204 (74.02%), Postives = 176/204 (86.27%), Query Frame = 0 

Query: 1   MIDFARVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPD 60
           MIDF+R+QKELQ+C ++ ++SGIRV PKSD+L+ L GTIPGPI TPYEGG FQIDIT+PD
Sbjct: 1   MIDFSRIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPD 60

Query: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 120
           GYPFEPPKMQF+TKVWHPNISSQSGAICLDILKDQWSPALTLKTAL+S+QALLSAP+P D
Sbjct: 61  GYPFEPPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKD 120

Query: 121 PQDAVVAQQ-----------YLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLMEMGFP 180
           PQDAVVA+Q           Y+++YQ F  TARYWTETFAK SSL  EEKV++L+EMGF 
Sbjct: 121 PQDAVVAEQVLLLHHLNHLRYMKNYQVFVSTARYWTETFAKKSSL--EEKVKRLVEMGFG 180

Query: 181 EAQVRSSLEAVGWDENLALEKLCS 194
           +AQVRS++E+ G DENLALEKLCS
Sbjct: 181 DAQVRSAIESSGGDENLALEKLCS 202

[Close]
BLAST of CsaV3_1G000230 vs. TAIR10
Match: AT5G41700.4 (ubiquitin conjugating enzyme 8)

HSP 1 Score: 143.3 bits (360), Expect = 1.6e-34
Identity = 70/144 (48.61%), Postives = 94/144 (65.28%), Query Frame = 0 

Query: 6   RVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPDGYPFE 65
           R+ KEL++  KD   S I   P ++ + H   TI GP  +PY GG+F + I  P  YPF+
Sbjct: 5   RILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFK 64

Query: 66  PPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDAV 125
           PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+   LLS+ +LL+ P PDDP    
Sbjct: 65  PPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 124

Query: 126 VAQQYLRDYQTFAGTARYWTETFA 150
           +A  Y  D   +  TAR WT+ +A
Sbjct: 125 IAHMYKTDRAKYEATARNWTQKYA 147

[Close]
BLAST of CsaV3_1G000230 vs. TAIR10
Match: AT3G08690.1 (ubiquitin-conjugating enzyme 11)

HSP 1 Score: 139.8 bits (351), Expect = 1.8e-33
Identity = 69/144 (47.92%), Postives = 93/144 (64.58%), Query Frame = 0 

Query: 6   RVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPDGYPFE 65
           R+ KEL++  KD   S     P ++ + H   TI GP  +PY GG+F + I  P  YPF+
Sbjct: 5   RILKELKDLQKD-PPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFK 64

Query: 66  PPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDAV 125
           PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+   LLS+ +LL+ P PDDP    
Sbjct: 65  PPKVSFKTKVYHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 124

Query: 126 VAQQYLRDYQTFAGTARYWTETFA 150
           +A  Y  D   +  TAR WT+ +A
Sbjct: 125 IAHMYKTDRSKYESTARSWTQKYA 146

[Close]
BLAST of CsaV3_1G000230 vs. TAIR10
Match: AT4G27960.2 (ubiquitin conjugating enzyme 9)

HSP 1 Score: 138.7 bits (348), Expect = 3.9e-33
Identity = 69/144 (47.92%), Postives = 93/144 (64.58%), Query Frame = 0 

Query: 6   RVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPDGYPFE 65
           R+ KEL++  KD   S     P ++ + H   TI GP  +PY GG+F + I  P  YPF+
Sbjct: 35  RILKELKDLQKDPPTS-CSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFK 94

Query: 66  PPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDAV 125
           PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+   LLS+ +LL+ P PDDP    
Sbjct: 95  PPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 154

Query: 126 VAQQYLRDYQTFAGTARYWTETFA 150
           +A  Y  D   +  TAR WT+ +A
Sbjct: 155 IAHMYKTDKNKYESTARTWTQKYA 176

[Close]
BLAST of CsaV3_1G000230 vs. TAIR10
Match: AT5G53300.1 (ubiquitin-conjugating enzyme 10)

HSP 1 Score: 138.3 bits (347), Expect = 5.1e-33
Identity = 69/144 (47.92%), Postives = 93/144 (64.58%), Query Frame = 0 

Query: 6   RVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPDGYPFE 65
           R+ KEL++  KD   S     P ++ + H   TI GP  +PY GG+F + I  P  YPF+
Sbjct: 5   RILKELKDLQKDPPTS-CSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFK 64

Query: 66  PPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDAV 125
           PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+   LLS+ +LL+ P PDDP    
Sbjct: 65  PPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 124

Query: 126 VAQQYLRDYQTFAGTARYWTETFA 150
           +A  Y  D   +  TAR WT+ +A
Sbjct: 125 IAHMYKTDKNKYESTARSWTQKYA 146

[Close]
BLAST of CsaV3_1G000230 vs. Swiss-Prot
Match: sp|Q9FI61|UBC27_ARATH (Ubiquitin-conjugating enzyme E2 27 OS=Arabidopsis thaliana OX=3702 GN=UBC27 PE=2 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 1.9e-85
Identity = 151/193 (78.24%), Postives = 176/193 (91.19%), Query Frame = 0 

Query: 1   MIDFARVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPD 60
           MIDF+R+QKELQ+C ++ ++SGIRV PKSD+L+ L GTIPGPI TPYEGG FQIDIT+PD
Sbjct: 1   MIDFSRIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPD 60

Query: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 120
           GYPFEPPKMQF+TKVWHPNISSQSGAICLDILKDQWSPALTLKTAL+S+QALLSAP+P D
Sbjct: 61  GYPFEPPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKD 120

Query: 121 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLMEMGFPEAQVRSSLEAV 180
           PQDAVVA+QY+++YQ F  TARYWTETFAK SSL  EEKV++L+EMGF +AQVRS++E+ 
Sbjct: 121 PQDAVVAEQYMKNYQVFVSTARYWTETFAKKSSL--EEKVKRLVEMGFGDAQVRSAIESS 180

Query: 181 GWDENLALEKLCS 194
           G DENLALEKLCS
Sbjct: 181 GGDENLALEKLCS 191

[Close]
BLAST of CsaV3_1G000230 vs. Swiss-Prot
Match: sp|P61085|UBE2K_BOVIN (Ubiquitin-conjugating enzyme E2 K OS=Bos taurus OX=9913 GN=UBE2K PE=1 SV=3)

HSP 1 Score: 185.3 bits (469), Expect = 6.6e-46
Identity = 95/192 (49.48%), Postives = 127/192 (66.15%), Query Frame = 0 

Query: 6   RVQKELQECTKDIEAS--GIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPDGYP 65
           R+++E +E  K  E S   I+V    ++ + L G I GP  TPYEGG +Q++I +P+ YP
Sbjct: 8   RIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYP 67

Query: 66  FEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQD 125
           F PPK++F TK+WHPNISS +GAICLDILKDQW+ A+TL+T LLS+QALL+A +PDDPQD
Sbjct: 68  FNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQD 127

Query: 126 AVVAQQYLRDYQTFAGTARYWTETF--AKTSSLGVEEKVQKLMEMGFPEAQVRSSLEAVG 185
           AVVA QY ++ + F  TAR W   +  A  SS    +K++ L  MGF    V  +L +  
Sbjct: 128 AVVANQYKQNPEMFKQTARLWAHVYAGAPVSSPEYTKKIENLCAMGFDRNAVIVALSSKS 187

Query: 186 WDENLALEKLCS 194
           WD   A E L S
Sbjct: 188 WDVETATELLLS 199

[Close]
BLAST of CsaV3_1G000230 vs. Swiss-Prot
Match: sp|P61086|UBE2K_HUMAN (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens OX=9606 GN=UBE2K PE=1 SV=3)

HSP 1 Score: 185.3 bits (469), Expect = 6.6e-46
Identity = 95/192 (49.48%), Postives = 127/192 (66.15%), Query Frame = 0 

Query: 6   RVQKELQECTKDIEAS--GIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPDGYP 65
           R+++E +E  K  E S   I+V    ++ + L G I GP  TPYEGG +Q++I +P+ YP
Sbjct: 8   RIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYP 67

Query: 66  FEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQD 125
           F PPK++F TK+WHPNISS +GAICLDILKDQW+ A+TL+T LLS+QALL+A +PDDPQD
Sbjct: 68  FNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQD 127

Query: 126 AVVAQQYLRDYQTFAGTARYWTETF--AKTSSLGVEEKVQKLMEMGFPEAQVRSSLEAVG 185
           AVVA QY ++ + F  TAR W   +  A  SS    +K++ L  MGF    V  +L +  
Sbjct: 128 AVVANQYKQNPEMFKQTARLWAHVYAGAPVSSPEYTKKIENLCAMGFDRNAVIVALSSKS 187

Query: 186 WDENLALEKLCS 194
           WD   A E L S
Sbjct: 188 WDVETATELLLS 199

[Close]
BLAST of CsaV3_1G000230 vs. Swiss-Prot
Match: sp|P61087|UBE2K_MOUSE (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus OX=10090 GN=Ube2k PE=1 SV=3)

HSP 1 Score: 185.3 bits (469), Expect = 6.6e-46
Identity = 95/192 (49.48%), Postives = 127/192 (66.15%), Query Frame = 0 

Query: 6   RVQKELQECTKDIEAS--GIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPDGYP 65
           R+++E +E  K  E S   I+V    ++ + L G I GP  TPYEGG +Q++I +P+ YP
Sbjct: 8   RIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYP 67

Query: 66  FEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQD 125
           F PPK++F TK+WHPNISS +GAICLDILKDQW+ A+TL+T LLS+QALL+A +PDDPQD
Sbjct: 68  FNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQD 127

Query: 126 AVVAQQYLRDYQTFAGTARYWTETF--AKTSSLGVEEKVQKLMEMGFPEAQVRSSLEAVG 185
           AVVA QY ++ + F  TAR W   +  A  SS    +K++ L  MGF    V  +L +  
Sbjct: 128 AVVANQYKQNPEMFKQTARLWAHVYAGAPVSSPEYTKKIENLCAMGFDRNAVIVALSSKS 187

Query: 186 WDENLALEKLCS 194
           WD   A E L S
Sbjct: 188 WDVETATELLLS 199

[Close]
BLAST of CsaV3_1G000230 vs. Swiss-Prot
Match: sp|P52484|UBC21_CAEEL (Probable ubiquitin-conjugating enzyme E2 21 OS=Caenorhabditis elegans OX=6239 GN=ubc-21 PE=3 SV=3)

HSP 1 Score: 183.0 bits (463), Expect = 3.3e-45
Identity = 92/190 (48.42%), Postives = 123/190 (64.74%), Query Frame = 0 

Query: 5   ARVQKELQEC--TKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPDGY 64
           ARV ++ +E     DI  +GI V  K ++L  + G I GP  TPY GG F+I + +P+ Y
Sbjct: 21  ARVTRKCKEVANASDITEAGIHVEIKENNLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHY 80

Query: 65  PFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQ 124
           PFEPPK +F T++WHPNISSQ+G ICLDILKD+W+ +LTL+T LLS+QA+L +P+P DPQ
Sbjct: 81  PFEPPKAKFVTRIWHPNISSQTGTICLDILKDKWTASLTLRTVLLSLQAMLCSPEPSDPQ 140

Query: 125 DAVVAQQYLRDYQTFAGTARYWTETFA---KTSSLGVEEKVQKLMEMGFPEAQVRSSLEA 184
           DAVVA+Q++ +Y  F  TA YWT  FA   K        KV +L+EMG  E +    L  
Sbjct: 141 DAVVAKQFINNYPMFTATAVYWTSYFANSKKDVEPDFNRKVGRLIEMGIRETEAIVYLSC 200

Query: 185 VGWDENLALE 190
             W    AL+
Sbjct: 201 NNWKLEQALQ 210

[Close]
BLAST of CsaV3_1G000230 vs. TrEMBL
Match: tr|A0A0A0LTY2|A0A0A0LTY2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000740 PE=3 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 2.5e-106
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0 

Query: 1   MIDFARVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPD 60
           MIDFARVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPD
Sbjct: 1   MIDFARVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPD 60

Query: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 120
           GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD
Sbjct: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 120

Query: 121 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLMEMGFPEAQVRSSLEAV 180
           PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLMEMGFPEAQVRSSLEAV
Sbjct: 121 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLMEMGFPEAQVRSSLEAV 180

Query: 181 GWDENLALEKLCSG 195
           GWDENLALEKLCSG
Sbjct: 181 GWDENLALEKLCSG 194

[Close]
BLAST of CsaV3_1G000230 vs. TrEMBL
Match: tr|A0A1S3CLG3|A0A1S3CLG3_CUCME (ubiquitin-conjugating enzyme E2 27 OS=Cucumis melo OX=3656 GN=LOC103502281 PE=3 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 9.4e-106
Identity = 193/194 (99.48%), Postives = 193/194 (99.48%), Query Frame = 0 

Query: 1   MIDFARVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPD 60
           MIDFARVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGG FQIDITLPD
Sbjct: 1   MIDFARVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGTFQIDITLPD 60

Query: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 120
           GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD
Sbjct: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 120

Query: 121 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLMEMGFPEAQVRSSLEAV 180
           PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLMEMGFPEAQVRSSLEAV
Sbjct: 121 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLMEMGFPEAQVRSSLEAV 180

Query: 181 GWDENLALEKLCSG 195
           GWDENLALEKLCSG
Sbjct: 181 GWDENLALEKLCSG 194

[Close]
BLAST of CsaV3_1G000230 vs. TrEMBL
Match: tr|A0A067JF67|A0A067JF67_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_26392 PE=3 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 2.7e-97
Identity = 176/194 (90.72%), Postives = 188/194 (96.91%), Query Frame = 0 

Query: 1   MIDFARVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPD 60
           MIDF+RVQKELQEC++DIEASGI+VTPKSD+L+ L+GTIPGPI TPYEGG FQIDI+LPD
Sbjct: 1   MIDFSRVQKELQECSRDIEASGIKVTPKSDNLARLIGTIPGPIGTPYEGGTFQIDISLPD 60

Query: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 120
           GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD
Sbjct: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 120

Query: 121 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLMEMGFPEAQVRSSLEAV 180
           PQDAVVAQQYL+DYQTF GTARYWTE+FAK SSLGVEEKVQKL+EMGFPEAQVRS+LEAV
Sbjct: 121 PQDAVVAQQYLKDYQTFVGTARYWTESFAKASSLGVEEKVQKLVEMGFPEAQVRSTLEAV 180

Query: 181 GWDENLALEKLCSG 195
           G DENLALEKLCSG
Sbjct: 181 GGDENLALEKLCSG 194

[Close]
BLAST of CsaV3_1G000230 vs. TrEMBL
Match: tr|A0A2C9UJU0|A0A2C9UJU0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G047100 PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 3.6e-97
Identity = 177/194 (91.24%), Postives = 188/194 (96.91%), Query Frame = 0 

Query: 1   MIDFARVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPD 60
           MIDFARVQKELQEC++DIEASGI VTPKS++L+ L GTIPGPI TPYEGGIFQIDI+LPD
Sbjct: 1   MIDFARVQKELQECSRDIEASGITVTPKSENLARLTGTIPGPIGTPYEGGIFQIDISLPD 60

Query: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 120
           GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD
Sbjct: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 120

Query: 121 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLMEMGFPEAQVRSSLEAV 180
           PQDAVVAQQYL+DYQTF+GTARYWTETFAKTSSLGVEEKVQKL+EMGFPEA VRS+L+AV
Sbjct: 121 PQDAVVAQQYLKDYQTFSGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEATVRSTLDAV 180

Query: 181 GWDENLALEKLCSG 195
           G DENLALEKLCSG
Sbjct: 181 GGDENLALEKLCSG 194

[Close]
BLAST of CsaV3_1G000230 vs. TrEMBL
Match: tr|B9RA92|B9RA92_RICCO (Ubiquitin-conjugating enzyme E2-25kD, putative OS=Ricinus communis OX=3988 GN=RCOM_1504700 PE=3 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 6.8e-96
Identity = 174/194 (89.69%), Postives = 185/194 (95.36%), Query Frame = 0 

Query: 1   MIDFARVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPD 60
           M+DFARVQKELQEC++D+E+SGI+VTPKSD+LS L GTIPGPI TPYEGG FQIDI+LPD
Sbjct: 1   MMDFARVQKELQECSRDVESSGIKVTPKSDNLSRLTGTIPGPIGTPYEGGTFQIDISLPD 60

Query: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 120
           GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD
Sbjct: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 120

Query: 121 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLMEMGFPEAQVRSSLEAV 180
           PQDAVVAQQYL+DYQTF GTARYWTETFAKTSSLGVEEKVQKL+EMGFPE  VRS+LEAV
Sbjct: 121 PQDAVVAQQYLKDYQTFVGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEGLVRSTLEAV 180

Query: 181 GWDENLALEKLCSG 195
             DENLALEKLCSG
Sbjct: 181 SGDENLALEKLCSG 194

The following BLAST results are available for this feature:
BLAST of CsaV3_1G000230 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004138029.13.7e-106100.00PREDICTED: ubiquitin-conjugating enzyme E2 27 [Cucumis sativus] >KGN63451.1 hypo... [more]
XP_008464378.11.4e-10599.48PREDICTED: ubiquitin-conjugating enzyme E2 27 [Cucumis melo][more]
XP_022921627.11.3e-10396.39ubiquitin-conjugating enzyme E2 27 [Cucurbita moschata] >XP_022921628.1 ubiquiti... [more]
XP_023515392.12.3e-10395.88ubiquitin-conjugating enzyme E2 27 [Cucurbita pepo subsp. pepo][more]
XP_022988308.13.9e-10395.88ubiquitin-conjugating enzyme E2 27 [Cucurbita maxima][more]
BLAST of CsaV3_1G000230 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G50870.23.8e-8474.02ubiquitin-conjugating enzyme 27[more]
AT5G41700.41.6e-3448.61ubiquitin conjugating enzyme 8[more]
AT3G08690.11.8e-3347.92ubiquitin-conjugating enzyme 11[more]
AT4G27960.23.9e-3347.92ubiquitin conjugating enzyme 9[more]
AT5G53300.15.1e-3347.92ubiquitin-conjugating enzyme 10[more]
BLAST of CsaV3_1G000230 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FI61|UBC27_ARATH1.9e-8578.24Ubiquitin-conjugating enzyme E2 27 OS=Arabidopsis thaliana OX=3702 GN=UBC27 PE=2... [more]
sp|P61085|UBE2K_BOVIN6.6e-4649.48Ubiquitin-conjugating enzyme E2 K OS=Bos taurus OX=9913 GN=UBE2K PE=1 SV=3[more]
sp|P61086|UBE2K_HUMAN6.6e-4649.48Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens OX=9606 GN=UBE2K PE=1 SV=3[more]
sp|P61087|UBE2K_MOUSE6.6e-4649.48Ubiquitin-conjugating enzyme E2 K OS=Mus musculus OX=10090 GN=Ube2k PE=1 SV=3[more]
sp|P52484|UBC21_CAEEL3.3e-4548.42Probable ubiquitin-conjugating enzyme E2 21 OS=Caenorhabditis elegans OX=6239 GN... [more]
BLAST of CsaV3_1G000230 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LTY2|A0A0A0LTY2_CUCSA2.5e-106100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000740 PE=3 SV=1[more]
tr|A0A1S3CLG3|A0A1S3CLG3_CUCME9.4e-10699.48ubiquitin-conjugating enzyme E2 27 OS=Cucumis melo OX=3656 GN=LOC103502281 PE=3 ... [more]
tr|A0A067JF67|A0A067JF67_JATCU2.7e-9790.72Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_26392 PE=3 SV=1[more]
tr|A0A2C9UJU0|A0A2C9UJU0_MANES3.6e-9791.24Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G047100 PE=3 SV=... [more]
tr|B9RA92|B9RA92_RICCO6.8e-9689.69Ubiquitin-conjugating enzyme E2-25kD, putative OS=Ricinus communis OX=3988 GN=RC... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR009060UBA-like_sf
IPR023313UBQ-conjugating_AS
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
IPR015940UBA
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0000209 protein polyubiquitination
cellular_component GO:0005575 cellular_component
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0061630 ubiquitin protein ligase activity
molecular_function GO:0031625 ubiquitin protein ligase binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G000230.1CsaV3_1G000230.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015940Ubiquitin-associated domainSMARTSM00165uba_6coord: 156..193
e-value: 3.2E-10
score: 49.9
IPR015940Ubiquitin-associated domainPFAMPF00627UBAcoord: 157..191
e-value: 2.9E-10
score: 39.8
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 155..194
score: 12.161
NoneNo IPR availableSMARTSM00212ubc_7coord: 5..150
e-value: 1.4E-64
score: 230.5
NoneNo IPR availableGENE3DG3DSA:1.10.8.10coord: 154..194
e-value: 2.2E-8
score: 35.7
NoneNo IPR availablePANTHERPTHR44020FAMILY NOT NAMEDcoord: 2..193
NoneNo IPR availablePANTHERPTHR44020:SF2UBIQUITIN-CONJUGATING ENZYME E2 Kcoord: 2..193
NoneNo IPR availableCDDcd14312UBA_II_E2_UBC27_likecoord: 157..192
e-value: 3.81063E-14
score: 62.7455
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 6..144
e-value: 1.1E-43
score: 148.1
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 5..139
score: 39.095
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 6..145
e-value: 5.81251E-63
score: 193.188
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3DG3DSA:3.10.110.10coord: 2..151
e-value: 1.2E-57
score: 195.9
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILYSSF54495UBC-likecoord: 6..150
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 76..92
IPR009060UBA-like superfamilySUPERFAMILYSSF46934UBA-likecoord: 130..194

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G000230CSPI01G00240Wild cucumber (PI 183967)cpicucB001
CsaV3_1G000230Cucsa.157050Cucumber (Gy14) v1cgycucB236
CsaV3_1G000230CmaCh10G000340Cucurbita maxima (Rimu)cmacucB0058
CsaV3_1G000230CmoCh10G000300Cucurbita moschata (Rifu)cmocucB0044
CsaV3_1G000230CsGy1G000250Cucumber (Gy14) v2cgybcucB002
CsaV3_1G000230Carg10256Silver-seed gourdcarcucB0395
CsaV3_1G000230Cla019307Watermelon (97103) v1cucwmB105
CsaV3_1G000230MELO3C026177Melon (DHL92) v3.5.1cucmeB053
CsaV3_1G000230ClCG06G018200Watermelon (Charleston Gray)cucwcgB088
CsaV3_1G000230Lsi06G016680Bottle gourd (USVL1VR-Ls)cuclsiB081
CsaV3_1G000230MELO3C026177.2Melon (DHL92) v3.6.1cucmedB050
CsaV3_1G000230Cla97C06G127970Watermelon (97103) v2cucwmbB076
CsaV3_1G000230Bhi02G000487Wax gourdcucwgoB087
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G000230Cucumber (Chinese Long) v3cuccucB003
CsaV3_1G000230Cucumber (Chinese Long) v3cuccucB017
CsaV3_1G000230Silver-seed gourdcarcucB0643
CsaV3_1G000230Cucumber (Gy14) v2cgybcucB010
CsaV3_1G000230Cucumber (Gy14) v2cgybcucB101
CsaV3_1G000230Cucurbita maxima (Rimu)cmacucB0100
CsaV3_1G000230Cucurbita maxima (Rimu)cmacucB0117
CsaV3_1G000230Cucurbita maxima (Rimu)cmacucB0256
CsaV3_1G000230Cucurbita maxima (Rimu)cmacucB0472
CsaV3_1G000230Cucurbita moschata (Rifu)cmocucB0243
CsaV3_1G000230Cucurbita moschata (Rifu)cmocucB0091
CsaV3_1G000230Cucurbita moschata (Rifu)cmocucB0094
CsaV3_1G000230Cucurbita moschata (Rifu)cmocucB0470
CsaV3_1G000230Cucurbita pepo (Zucchini)cpecucB0029
CsaV3_1G000230Cucurbita pepo (Zucchini)cpecucB0442
CsaV3_1G000230Cucurbita pepo (Zucchini)cpecucB0630
CsaV3_1G000230Cucurbita pepo (Zucchini)cpecucB0804
CsaV3_1G000230Cucurbita pepo (Zucchini)cpecucB0814
CsaV3_1G000230Wild cucumber (PI 183967)cpicucB014
CsaV3_1G000230Wild cucumber (PI 183967)cpicucB126
CsaV3_1G000230Bottle gourd (USVL1VR-Ls)cuclsiB039
CsaV3_1G000230Melon (DHL92) v3.5.1cucmeB019
CsaV3_1G000230Melon (DHL92) v3.5.1cucmeB084
CsaV3_1G000230Melon (DHL92) v3.6.1cucmedB017
CsaV3_1G000230Melon (DHL92) v3.6.1cucmedB077
CsaV3_1G000230Watermelon (Charleston Gray)cucwcgB056
CsaV3_1G000230Watermelon (97103) v1cucwmB032
CsaV3_1G000230Watermelon (97103) v2cucwmbB048
CsaV3_1G000230Wax gourdcucwgoB062