CmaCh10G000340 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh10G000340
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUbiquitin-conjugating enzyme family protein
LocationCma_Chr10 : 123234 .. 126017 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAGATTAGAGGAGGACAGAGTAGTGCGTTGGCTAAATTGTGAGAGACGGAAAAGAGGAGAGTGAAAGCGAATCCAGGTAACGGAAGTCACTATTATTCTCTTCGCTTCAACAATTTCTAAATTTCCATTTTCGCTTCTCCAATTTCTAAACTAAGCGATTTTTCAATTGGTATTAAAACCATCTAACACCATCGATTAGGTTACCATGTATCCATCACTCAAGAAGATGATGGATTTCGCTCGCGTGCAAAAGGAACTCCAAGAATGCAGTAAGGACATTGAGGCTTCAGGTATTAGAGTCACCCCCAAAGCCGATAATCTTTCCCACTTGCTCGGCACCATTCCTGGTCCTGTCGCTACTCCTTACGAAGGCGGCACCTTCCAAATTGACATCACGTTGCCAGGTCCCTCTAATTACTCCCTCCTTTTCTTCTTTCACTTACTGTTTCTTTCCTCGCCTCCATTTGAATGCTCCCACTCAGATTAGCATTAGGGTTTCCGAGTAAGTATGTCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATGTGAGGCATTAGGGCTTGAATCTATGACTGGAAATTACCTTTGGCAAGTTCATGATTTTGGAATAATAAATTATAATTTCAGCTGTCCTCCACGAAAAAAAAAGAAAGAAAGAGAGAGAAGAAAAACACATATTCTATAGAAGAGCGATGTGTTTCATCGATTTTTTGTTTTACACGGCATAGAACTGTTAAACTGTTTTCTAACAGTCCACACTAGCTCCCTTTACGGCTGTTTCTTTCAAGTTTTTTAAGTTAAAACTATGTTAAATTCAGCCCTCGTGCGTTTTTTGTTCACTTCCAGTTATTCTGTTGCACATTTTTGCTGTAAAAAATAAAAGAGAGGGAAACAGTTGAGAGTTTTTTAGTTTTATCGATCCCGTTTATAGAAAACAATCCTGTTACGCGCTTGAGGCATATTTAAAATCACTCCTCGGTAAGAGCTTTGTTGGGAGAACCATTCCTTGCTCTATTGAATATTTATGGTAAAGGATTGTATATTGTCCGAGTGTGTTCCATGACCTCTTAACATGTTCCCCGAGTTTTTATAATATTGCTTTACCTTTTTAGCTGGCGGCTTTCTATAATTGCTATCAGTGAAGCATTTGTTACAATGTTATCTGAAGCGTAAGGACTAAAGTGCAATAGCCCTCTCAATGAGGAATGTTGTTTGTGAGGCACACAATAGAAAAAAATTGTGTATTATGCATAATATGATGGTGAAAATTGTAACACAATAGAGCTCATGAGAGTTTGTTTAAGGAAATGATGAATTTTGGAGTATATTTTTTGGCTTCAAAAATTTAAAATGTTGATGCTTCATGGCATGCGCTTCAGTGAGGACTTCATTCATGGAAAACTTGCCTAAGCACGCTTTCAAAACATTGTTTTTATCTAACCCTTATCATGTATCTTATACGTGGGTTTCCCCCCCTTGCAGATGGGTATCCATTTGAGCCGCCCAAAATGCAGTTTGCTACAAAAGTCTGGTAAGGACAATATATGCATGGCTTCCTTTCTTGTTATGCTTGCCGAGCAGATAATGTCGAGATTTCTTAGGTGTGCACAGAGCGTGTCTGCGTTTAGTGGATGGAGTTGCTTTCCAGAGAACATGCAGATGTTTTCTTGATCTAATCAAAATAATAGTTTTGTTTTTGGATGTGGAGATTTGGAGGTCATCAATTGTGGATATGATGTTGCAATTTTCATTCAACACGTTGACATTGCTATGCATTCTGAATTTTTTCTAAAATGTTTTTACCATGAAGGAGTTTGTGACTTAATGTTATTGATCTAGTTCAATATATGTATATGAGATTATGCTGAAACTTTGGAGTTTTGTTTGGTCTATTATGTTGTGAAGGCACCCTAATATCAGTAGTCAAAGTGGTGCAATTTGCCTGGACATTTTGAAGGATCAGTGGAGCCCAGCACTTACGTTGAAGACAGCCCTGCTTTCTGTGCAGGCGTTGCTCTCTGCTCCTCAACCTGATGATCCTCAAGATGCTGTGGTGGCACAACAGGTATTGTTAAGTCTATCTTCACTGCATGGATGTTGGTTGTTTTGTGTTTTCAGATTTTGGTATTGAAGATATGAAGTTTAGATCCTATCAAAAGCGATATTAAGTTTAATATGTCCGAACACATATTGGTGCAGTATCTTAGAGACTACCAGACTTTTGCTGGCACAGCTCGATACTGGACAGAAACTTTTGCCAAGACGTCATCACTTGGAGTGGAAGAAAAGGTTAAAGCCTTAGCTTTGGTTTTGCATGTTGCGTGCATGATAAATCATATATAGTTGTGTTTGAGGAGTAGTTCTTTTGTTAAAGCGTGTGCACCGAATATTGATGTGAAGAAAATATTGCAGGTTCAGAAGCTTGTGGAGATGGGATTCCCGGAGGCTCAAGTAAGGAGCAGTTTGGAAGCTGTGGGATGGGATGAAAATTTGGCCTTGGAAAAGCTCTGCTCCGGCTAAGTTCTCACTCGTCTGCCATAGACGAAACATAGGAGCACATACTGATCCCAAGGGTCGTATTTATACTATGGCCT

mRNA sequence

AAAAGATTAGAGGAGGACAGAGTAGTGCGTTGGCTAAATTGTGAGAGACGGAAAAGAGGAGAGTGAAAGCGAATCCAGGTTACCATGTATCCATCACTCAAGAAGATGATGGATTTCGCTCGCGTGCAAAAGGAACTCCAAGAATGCAGTAAGGACATTGAGGCTTCAGGTATTAGAGTCACCCCCAAAGCCGATAATCTTTCCCACTTGCTCGGCACCATTCCTGGTCCTGTCGCTACTCCTTACGAAGGCGGCACCTTCCAAATTGACATCACGTTGCCAGATGGGTATCCATTTGAGCCGCCCAAAATGCAGTTTGCTACAAAAGTCTGGCACCCTAATATCAGTAGTCAAAGTGGTGCAATTTGCCTGGACATTTTGAAGGATCAGTGGAGCCCAGCACTTACGTTGAAGACAGCCCTGCTTTCTGTGCAGGCGTTGCTCTCTGCTCCTCAACCTGATGATCCTCAAGATGCTGTGGTGGCACAACAGTATCTTAGAGACTACCAGACTTTTGCTGGCACAGCTCGATACTGGACAGAAACTTTTGCCAAGACGTCATCACTTGGAGTGGAAGAAAAGGTTCAGAAGCTTGTGGAGATGGGATTCCCGGAGGCTCAAGTAAGGAGCAGTTTGGAAGCTGTGGGATGGGATGAAAATTTGGCCTTGGAAAAGCTCTGCTCCGGCTAAGTTCTCACTCGTCTGCCATAGACGAAACATAGGAGCACATACTGATCCCAAGGGTCGTATTTATACTATGGCCT

Coding sequence (CDS)

ATGTATCCATCACTCAAGAAGATGATGGATTTCGCTCGCGTGCAAAAGGAACTCCAAGAATGCAGTAAGGACATTGAGGCTTCAGGTATTAGAGTCACCCCCAAAGCCGATAATCTTTCCCACTTGCTCGGCACCATTCCTGGTCCTGTCGCTACTCCTTACGAAGGCGGCACCTTCCAAATTGACATCACGTTGCCAGATGGGTATCCATTTGAGCCGCCCAAAATGCAGTTTGCTACAAAAGTCTGGCACCCTAATATCAGTAGTCAAAGTGGTGCAATTTGCCTGGACATTTTGAAGGATCAGTGGAGCCCAGCACTTACGTTGAAGACAGCCCTGCTTTCTGTGCAGGCGTTGCTCTCTGCTCCTCAACCTGATGATCCTCAAGATGCTGTGGTGGCACAACAGTATCTTAGAGACTACCAGACTTTTGCTGGCACAGCTCGATACTGGACAGAAACTTTTGCCAAGACGTCATCACTTGGAGTGGAAGAAAAGGTTCAGAAGCTTGTGGAGATGGGATTCCCGGAGGCTCAAGTAAGGAGCAGTTTGGAAGCTGTGGGATGGGATGAAAATTTGGCCTTGGAAAAGCTCTGCTCCGGCTAA

Protein sequence

MYPSLKKMMDFARVQKELQECSKDIEASGIRVTPKADNLSHLLGTIPGPVATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVGWDENLALEKLCSG
Homology
[Close]
BLAST of CmaCh10G000340 vs. Swiss-Prot
Match: UBC27_ARATH (Ubiquitin-conjugating enzyme E2 27 OS=Arabidopsis thaliana GN=UBC27 PE=2 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 3.9e-86
Identity = 151/193 (78.24%), Postives = 177/193 (91.71%), Query Frame = 1 

Query: 8   MMDFARVQKELQECSKDIEASGIRVTPKADNLSHLLGTIPGPVATPYEGGTFQIDITLPD 67
           M+DF+R+QKELQ+C ++ ++SGIRV PK+DNL+ L GTIPGP+ TPYEGGTFQIDIT+PD
Sbjct: 1   MIDFSRIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPD 60

Query: 68  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 127
           GYPFEPPKMQF+TKVWHPNISSQSGAICLDILKDQWSPALTLKTAL+S+QALLSAP+P D
Sbjct: 61  GYPFEPPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKD 120

Query: 128 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAV 187
           PQDAVVA+QY+++YQ F  TARYWTETFAK SSL  EEKV++LVEMGF +AQVRS++E+ 
Sbjct: 121 PQDAVVAEQYMKNYQVFVSTARYWTETFAKKSSL--EEKVKRLVEMGFGDAQVRSAIESS 180

Query: 188 GWDENLALEKLCS 201
           G DENLALEKLCS
Sbjct: 181 GGDENLALEKLCS 191

[Close]
BLAST of CmaCh10G000340 vs. Swiss-Prot
Match: UBC21_CAEEL (Probable ubiquitin-conjugating enzyme E2 21 OS=Caenorhabditis elegans GN=ubc-21 PE=3 SV=3)

HSP 1 Score: 188.0 bits (476), Expect = 1.0e-46
Identity = 94/190 (49.47%), Postives = 125/190 (65.79%), Query Frame = 1 

Query: 12  ARVQKELQECSK--DIEASGIRVTPKADNLSHLLGTIPGPVATPYEGGTFQIDITLPDGY 71
           ARV ++ +E +   DI  +GI V  K +NL  + G I GP  TPY GGTF+I + +P+ Y
Sbjct: 21  ARVTRKCKEVANASDITEAGIHVEIKENNLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHY 80

Query: 72  PFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQ 131
           PFEPPK +F T++WHPNISSQ+G ICLDILKD+W+ +LTL+T LLS+QA+L +P+P DPQ
Sbjct: 81  PFEPPKAKFVTRIWHPNISSQTGTICLDILKDKWTASLTLRTVLLSLQAMLCSPEPSDPQ 140

Query: 132 DAVVAQQYLRDYQTFAGTARYWTETFA---KTSSLGVEEKVQKLVEMGFPEAQVRSSLEA 191
           DAVVA+Q++ +Y  F  TA YWT  FA   K        KV +L+EMG  E +    L  
Sbjct: 141 DAVVAKQFINNYPMFTATAVYWTSYFANSKKDVEPDFNRKVGRLIEMGIRETEAIVYLSC 200

Query: 192 VGWDENLALE 197
             W    AL+
Sbjct: 201 NNWKLEQALQ 210

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BLAST of CmaCh10G000340 vs. Swiss-Prot
Match: UBE2K_MOUSE (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=1 SV=3)

HSP 1 Score: 185.7 bits (470), Expect = 5.1e-46
Identity = 96/192 (50.00%), Postives = 127/192 (66.15%), Query Frame = 1 

Query: 13  RVQKELQECSKDIEASG--IRVTPKADNLSHLLGTIPGPVATPYEGGTFQIDITLPDGYP 72
           R+++E +E  K  E S   I+V    +N + L G I GP  TPYEGG +Q++I +P+ YP
Sbjct: 8   RIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYP 67

Query: 73  FEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQD 132
           F PPK++F TK+WHPNISS +GAICLDILKDQW+ A+TL+T LLS+QALL+A +PDDPQD
Sbjct: 68  FNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQD 127

Query: 133 AVVAQQYLRDYQTFAGTARYWTETF--AKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVG 192
           AVVA QY ++ + F  TAR W   +  A  SS    +K++ L  MGF    V  +L +  
Sbjct: 128 AVVANQYKQNPEMFKQTARLWAHVYAGAPVSSPEYTKKIENLCAMGFDRNAVIVALSSKS 187

Query: 193 WDENLALEKLCS 201
           WD   A E L S
Sbjct: 188 WDVETATELLLS 199

[Close]
BLAST of CmaCh10G000340 vs. Swiss-Prot
Match: UBE2K_HUMAN (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1 SV=3)

HSP 1 Score: 185.7 bits (470), Expect = 5.1e-46
Identity = 96/192 (50.00%), Postives = 127/192 (66.15%), Query Frame = 1 

Query: 13  RVQKELQECSKDIEASG--IRVTPKADNLSHLLGTIPGPVATPYEGGTFQIDITLPDGYP 72
           R+++E +E  K  E S   I+V    +N + L G I GP  TPYEGG +Q++I +P+ YP
Sbjct: 8   RIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYP 67

Query: 73  FEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQD 132
           F PPK++F TK+WHPNISS +GAICLDILKDQW+ A+TL+T LLS+QALL+A +PDDPQD
Sbjct: 68  FNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQD 127

Query: 133 AVVAQQYLRDYQTFAGTARYWTETF--AKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVG 192
           AVVA QY ++ + F  TAR W   +  A  SS    +K++ L  MGF    V  +L +  
Sbjct: 128 AVVANQYKQNPEMFKQTARLWAHVYAGAPVSSPEYTKKIENLCAMGFDRNAVIVALSSKS 187

Query: 193 WDENLALEKLCS 201
           WD   A E L S
Sbjct: 188 WDVETATELLLS 199

[Close]
BLAST of CmaCh10G000340 vs. Swiss-Prot
Match: UBE2K_BOVIN (Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3)

HSP 1 Score: 185.7 bits (470), Expect = 5.1e-46
Identity = 96/192 (50.00%), Postives = 127/192 (66.15%), Query Frame = 1 

Query: 13  RVQKELQECSKDIEASG--IRVTPKADNLSHLLGTIPGPVATPYEGGTFQIDITLPDGYP 72
           R+++E +E  K  E S   I+V    +N + L G I GP  TPYEGG +Q++I +P+ YP
Sbjct: 8   RIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYP 67

Query: 73  FEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQD 132
           F PPK++F TK+WHPNISS +GAICLDILKDQW+ A+TL+T LLS+QALL+A +PDDPQD
Sbjct: 68  FNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQD 127

Query: 133 AVVAQQYLRDYQTFAGTARYWTETF--AKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAVG 192
           AVVA QY ++ + F  TAR W   +  A  SS    +K++ L  MGF    V  +L +  
Sbjct: 128 AVVANQYKQNPEMFKQTARLWAHVYAGAPVSSPEYTKKIENLCAMGFDRNAVIVALSSKS 187

Query: 193 WDENLALEKLCS 201
           WD   A E L S
Sbjct: 188 WDVETATELLLS 199

[Close]
BLAST of CmaCh10G000340 vs. TrEMBL
Match: A0A0A0LTY2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000740 PE=3 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 2.4e-103
Identity = 186/194 (95.88%), Postives = 193/194 (99.48%), Query Frame = 1 

Query: 8   MMDFARVQKELQECSKDIEASGIRVTPKADNLSHLLGTIPGPVATPYEGGTFQIDITLPD 67
           M+DFARVQKELQEC+KDIEASGIRVTPK+D+LSHLLGTIPGP++TPYEGG FQIDITLPD
Sbjct: 1   MIDFARVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPD 60

Query: 68  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 127
           GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD
Sbjct: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 120

Query: 128 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAV 187
           PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKL+EMGFPEAQVRSSLEAV
Sbjct: 121 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLMEMGFPEAQVRSSLEAV 180

Query: 188 GWDENLALEKLCSG 202
           GWDENLALEKLCSG
Sbjct: 181 GWDENLALEKLCSG 194

[Close]
BLAST of CmaCh10G000340 vs. TrEMBL
Match: A0A067JF67_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26392 PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 1.8e-98
Identity = 177/194 (91.24%), Postives = 189/194 (97.42%), Query Frame = 1 

Query: 8   MMDFARVQKELQECSKDIEASGIRVTPKADNLSHLLGTIPGPVATPYEGGTFQIDITLPD 67
           M+DF+RVQKELQECS+DIEASGI+VTPK+DNL+ L+GTIPGP+ TPYEGGTFQIDI+LPD
Sbjct: 1   MIDFSRVQKELQECSRDIEASGIKVTPKSDNLARLIGTIPGPIGTPYEGGTFQIDISLPD 60

Query: 68  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 127
           GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD
Sbjct: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 120

Query: 128 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAV 187
           PQDAVVAQQYL+DYQTF GTARYWTE+FAK SSLGVEEKVQKLVEMGFPEAQVRS+LEAV
Sbjct: 121 PQDAVVAQQYLKDYQTFVGTARYWTESFAKASSLGVEEKVQKLVEMGFPEAQVRSTLEAV 180

Query: 188 GWDENLALEKLCSG 202
           G DENLALEKLCSG
Sbjct: 181 GGDENLALEKLCSG 194

[Close]
BLAST of CmaCh10G000340 vs. TrEMBL
Match: B9RA92_RICCO (Ubiquitin-conjugating enzyme E2-25kD, putative OS=Ricinus communis GN=RCOM_1504700 PE=3 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 6.9e-98
Identity = 177/194 (91.24%), Postives = 186/194 (95.88%), Query Frame = 1 

Query: 8   MMDFARVQKELQECSKDIEASGIRVTPKADNLSHLLGTIPGPVATPYEGGTFQIDITLPD 67
           MMDFARVQKELQECS+D+E+SGI+VTPK+DNLS L GTIPGP+ TPYEGGTFQIDI+LPD
Sbjct: 1   MMDFARVQKELQECSRDVESSGIKVTPKSDNLSRLTGTIPGPIGTPYEGGTFQIDISLPD 60

Query: 68  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 127
           GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD
Sbjct: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 120

Query: 128 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAV 187
           PQDAVVAQQYL+DYQTF GTARYWTETFAKTSSLGVEEKVQKLVEMGFPE  VRS+LEAV
Sbjct: 121 PQDAVVAQQYLKDYQTFVGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEGLVRSTLEAV 180

Query: 188 GWDENLALEKLCSG 202
             DENLALEKLCSG
Sbjct: 181 SGDENLALEKLCSG 194

[Close]
BLAST of CmaCh10G000340 vs. TrEMBL
Match: A9P939_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 1.7e-96
Identity = 174/194 (89.69%), Postives = 184/194 (94.85%), Query Frame = 1 

Query: 8   MMDFARVQKELQECSKDIEASGIRVTPKADNLSHLLGTIPGPVATPYEGGTFQIDITLPD 67
           M+DFARVQKELQECS+D+EASGI+V PK+DNL  L GTIPGP+ TPYEGGTFQIDITLPD
Sbjct: 1   MIDFARVQKELQECSRDMEASGIKVAPKSDNLGRLTGTIPGPIGTPYEGGTFQIDITLPD 60

Query: 68  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 127
           GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAP+PDD
Sbjct: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPEPDD 120

Query: 128 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAV 187
           PQDAVVAQQYLRDYQTF GTARYWTETFAKTSSLGVEEKVQKLVEMGFPE+  R +LE+V
Sbjct: 121 PQDAVVAQQYLRDYQTFVGTARYWTETFAKTSSLGVEEKVQKLVEMGFPESLARGALESV 180

Query: 188 GWDENLALEKLCSG 202
           G DENLALEKLCSG
Sbjct: 181 GGDENLALEKLCSG 194

[Close]
BLAST of CmaCh10G000340 vs. TrEMBL
Match: B9I3X3_POPTR (Ubiquitin-conjugating enzyme family protein OS=Populus trichocarpa GN=POPTR_0012s10590g PE=3 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 2.4e-95
Identity = 173/194 (89.18%), Postives = 185/194 (95.36%), Query Frame = 1 

Query: 8   MMDFARVQKELQECSKDIEASGIRVTPKADNLSHLLGTIPGPVATPYEGGTFQIDITLPD 67
           M+DFARVQKELQECS+D+EASGI+V PK+DNL+ L GTIPGP+++PYEGGTFQIDITLPD
Sbjct: 1   MIDFARVQKELQECSRDMEASGIKVAPKSDNLARLTGTIPGPISSPYEGGTFQIDITLPD 60

Query: 68  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 127
           GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAP+PDD
Sbjct: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPEPDD 120

Query: 128 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAV 187
           PQDAVVAQQYLRD QTF GTARYWTETFAKTSSLGVEEKVQKLVEMGFPEA  RS+LE+V
Sbjct: 121 PQDAVVAQQYLRDRQTFVGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEALARSALESV 180

Query: 188 GWDENLALEKLCSG 202
           G DEN ALEKLCSG
Sbjct: 181 GGDENSALEKLCSG 194

[Close]
BLAST of CmaCh10G000340 vs. TAIR10
Match: AT5G50870.2 (AT5G50870.2 ubiquitin-conjugating enzyme 27)

HSP 1 Score: 310.5 bits (794), Expect = 7.8e-85
Identity = 151/204 (74.02%), Postives = 177/204 (86.76%), Query Frame = 1 

Query: 8   MMDFARVQKELQECSKDIEASGIRVTPKADNLSHLLGTIPGPVATPYEGGTFQIDITLPD 67
           M+DF+R+QKELQ+C ++ ++SGIRV PK+DNL+ L GTIPGP+ TPYEGGTFQIDIT+PD
Sbjct: 1   MIDFSRIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPD 60

Query: 68  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 127
           GYPFEPPKMQF+TKVWHPNISSQSGAICLDILKDQWSPALTLKTAL+S+QALLSAP+P D
Sbjct: 61  GYPFEPPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKD 120

Query: 128 PQDAVVAQQ-----------YLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFP 187
           PQDAVVA+Q           Y+++YQ F  TARYWTETFAK SSL  EEKV++LVEMGF 
Sbjct: 121 PQDAVVAEQVLLLHHLNHLRYMKNYQVFVSTARYWTETFAKKSSL--EEKVKRLVEMGFG 180

Query: 188 EAQVRSSLEAVGWDENLALEKLCS 201
           +AQVRS++E+ G DENLALEKLCS
Sbjct: 181 DAQVRSAIESSGGDENLALEKLCS 202

[Close]
BLAST of CmaCh10G000340 vs. TAIR10
Match: AT5G41700.4 (AT5G41700.4 ubiquitin conjugating enzyme 8)

HSP 1 Score: 144.1 bits (362), Expect = 9.7e-35
Identity = 71/144 (49.31%), Postives = 94/144 (65.28%), Query Frame = 1 

Query: 13  RVQKELQECSKDIEASGIRVTPKADNLSHLLGTIPGPVATPYEGGTFQIDITLPDGYPFE 72
           R+ KEL++  KD   S I   P A+++ H   TI GP  +PY GG F + I  P  YPF+
Sbjct: 5   RILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFK 64

Query: 73  PPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDAV 132
           PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+   LLS+ +LL+ P PDDP    
Sbjct: 65  PPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 124

Query: 133 VAQQYLRDYQTFAGTARYWTETFA 157
           +A  Y  D   +  TAR WT+ +A
Sbjct: 125 IAHMYKTDRAKYEATARNWTQKYA 147

[Close]
BLAST of CmaCh10G000340 vs. TAIR10
Match: AT3G08690.1 (AT3G08690.1 ubiquitin-conjugating enzyme 11)

HSP 1 Score: 140.6 bits (353), Expect = 1.1e-33
Identity = 70/144 (48.61%), Postives = 93/144 (64.58%), Query Frame = 1 

Query: 13  RVQKELQECSKDIEASGIRVTPKADNLSHLLGTIPGPVATPYEGGTFQIDITLPDGYPFE 72
           R+ KEL++  KD   S     P A+++ H   TI GP  +PY GG F + I  P  YPF+
Sbjct: 5   RILKELKDLQKD-PPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFK 64

Query: 73  PPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDAV 132
           PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+   LLS+ +LL+ P PDDP    
Sbjct: 65  PPKVSFKTKVYHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 124

Query: 133 VAQQYLRDYQTFAGTARYWTETFA 157
           +A  Y  D   +  TAR WT+ +A
Sbjct: 125 IAHMYKTDRSKYESTARSWTQKYA 146

[Close]
BLAST of CmaCh10G000340 vs. TAIR10
Match: AT4G27960.2 (AT4G27960.2 ubiquitin conjugating enzyme 9)

HSP 1 Score: 138.7 bits (348), Expect = 4.1e-33
Identity = 70/144 (48.61%), Postives = 93/144 (64.58%), Query Frame = 1 

Query: 13  RVQKELQECSKDIEASGIRVTPKADNLSHLLGTIPGPVATPYEGGTFQIDITLPDGYPFE 72
           R+ KEL++  KD   S     P A+++ H   TI GP  +PY GG F + I  P  YPF+
Sbjct: 35  RILKELKDLQKDPPTS-CSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFK 94

Query: 73  PPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDAV 132
           PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+   LLS+ +LL+ P PDDP    
Sbjct: 95  PPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 154

Query: 133 VAQQYLRDYQTFAGTARYWTETFA 157
           +A  Y  D   +  TAR WT+ +A
Sbjct: 155 IAHMYKTDKNKYESTARTWTQKYA 176

[Close]
BLAST of CmaCh10G000340 vs. TAIR10
Match: AT5G53300.1 (AT5G53300.1 ubiquitin-conjugating enzyme 10)

HSP 1 Score: 138.7 bits (348), Expect = 4.1e-33
Identity = 70/144 (48.61%), Postives = 93/144 (64.58%), Query Frame = 1 

Query: 13  RVQKELQECSKDIEASGIRVTPKADNLSHLLGTIPGPVATPYEGGTFQIDITLPDGYPFE 72
           R+ KEL++  KD   S     P A+++ H   TI GP  +PY GG F + I  P  YPF+
Sbjct: 5   RILKELKDLQKDPPTS-CSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFK 64

Query: 73  PPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDAV 132
           PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+   LLS+ +LL+ P PDDP    
Sbjct: 65  PPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 124

Query: 133 VAQQYLRDYQTFAGTARYWTETFA 157
           +A  Y  D   +  TAR WT+ +A
Sbjct: 125 IAHMYKTDKNKYESTARSWTQKYA 146

[Close]
BLAST of CmaCh10G000340 vs. NCBI nr
Match: gi|659128804|ref|XP_008464378.1| (PREDICTED: ubiquitin-conjugating enzyme E2 27 [Cucumis melo])

HSP 1 Score: 385.2 bits (988), Expect = 7.1e-104
Identity = 187/194 (96.39%), Postives = 194/194 (100.00%), Query Frame = 1 

Query: 8   MMDFARVQKELQECSKDIEASGIRVTPKADNLSHLLGTIPGPVATPYEGGTFQIDITLPD 67
           M+DFARVQKELQEC+KDIEASGIRVTPK+D+LSHLLGTIPGP++TPYEGGTFQIDITLPD
Sbjct: 1   MIDFARVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGTFQIDITLPD 60

Query: 68  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 127
           GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD
Sbjct: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 120

Query: 128 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAV 187
           PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKL+EMGFPEAQVRSSLEAV
Sbjct: 121 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLMEMGFPEAQVRSSLEAV 180

Query: 188 GWDENLALEKLCSG 202
           GWDENLALEKLCSG
Sbjct: 181 GWDENLALEKLCSG 194

[Close]
BLAST of CmaCh10G000340 vs. NCBI nr
Match: gi|449440514|ref|XP_004138029.1| (PREDICTED: ubiquitin-conjugating enzyme E2 27 [Cucumis sativus])

HSP 1 Score: 382.9 bits (982), Expect = 3.5e-103
Identity = 186/194 (95.88%), Postives = 193/194 (99.48%), Query Frame = 1 

Query: 8   MMDFARVQKELQECSKDIEASGIRVTPKADNLSHLLGTIPGPVATPYEGGTFQIDITLPD 67
           M+DFARVQKELQEC+KDIEASGIRVTPK+D+LSHLLGTIPGP++TPYEGG FQIDITLPD
Sbjct: 1   MIDFARVQKELQECTKDIEASGIRVTPKSDSLSHLLGTIPGPISTPYEGGIFQIDITLPD 60

Query: 68  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 127
           GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD
Sbjct: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 120

Query: 128 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAV 187
           PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKL+EMGFPEAQVRSSLEAV
Sbjct: 121 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLMEMGFPEAQVRSSLEAV 180

Query: 188 GWDENLALEKLCSG 202
           GWDENLALEKLCSG
Sbjct: 181 GWDENLALEKLCSG 194

[Close]
BLAST of CmaCh10G000340 vs. NCBI nr
Match: gi|802770435|ref|XP_012090621.1| (PREDICTED: ubiquitin-conjugating enzyme E2 27 [Jatropha curcas])

HSP 1 Score: 366.7 bits (940), Expect = 2.6e-98
Identity = 177/194 (91.24%), Postives = 189/194 (97.42%), Query Frame = 1 

Query: 8   MMDFARVQKELQECSKDIEASGIRVTPKADNLSHLLGTIPGPVATPYEGGTFQIDITLPD 67
           M+DF+RVQKELQECS+DIEASGI+VTPK+DNL+ L+GTIPGP+ TPYEGGTFQIDI+LPD
Sbjct: 1   MIDFSRVQKELQECSRDIEASGIKVTPKSDNLARLIGTIPGPIGTPYEGGTFQIDISLPD 60

Query: 68  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 127
           GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD
Sbjct: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 120

Query: 128 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAV 187
           PQDAVVAQQYL+DYQTF GTARYWTE+FAK SSLGVEEKVQKLVEMGFPEAQVRS+LEAV
Sbjct: 121 PQDAVVAQQYLKDYQTFVGTARYWTESFAKASSLGVEEKVQKLVEMGFPEAQVRSTLEAV 180

Query: 188 GWDENLALEKLCSG 202
           G DENLALEKLCSG
Sbjct: 181 GGDENLALEKLCSG 194

[Close]
BLAST of CmaCh10G000340 vs. NCBI nr
Match: gi|255540105|ref|XP_002511117.1| (PREDICTED: ubiquitin-conjugating enzyme E2 27 [Ricinus communis])

HSP 1 Score: 364.8 bits (935), Expect = 9.9e-98
Identity = 177/194 (91.24%), Postives = 186/194 (95.88%), Query Frame = 1 

Query: 8   MMDFARVQKELQECSKDIEASGIRVTPKADNLSHLLGTIPGPVATPYEGGTFQIDITLPD 67
           MMDFARVQKELQECS+D+E+SGI+VTPK+DNLS L GTIPGP+ TPYEGGTFQIDI+LPD
Sbjct: 1   MMDFARVQKELQECSRDVESSGIKVTPKSDNLSRLTGTIPGPIGTPYEGGTFQIDISLPD 60

Query: 68  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 127
           GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD
Sbjct: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 120

Query: 128 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAV 187
           PQDAVVAQQYL+DYQTF GTARYWTETFAKTSSLGVEEKVQKLVEMGFPE  VRS+LEAV
Sbjct: 121 PQDAVVAQQYLKDYQTFVGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEGLVRSTLEAV 180

Query: 188 GWDENLALEKLCSG 202
             DENLALEKLCSG
Sbjct: 181 SGDENLALEKLCSG 194

[Close]
BLAST of CmaCh10G000340 vs. NCBI nr
Match: gi|743916284|ref|XP_011002115.1| (PREDICTED: ubiquitin-conjugating enzyme E2 27-like [Populus euphratica])

HSP 1 Score: 361.3 bits (926), Expect = 1.1e-96
Identity = 175/194 (90.21%), Postives = 184/194 (94.85%), Query Frame = 1 

Query: 8   MMDFARVQKELQECSKDIEASGIRVTPKADNLSHLLGTIPGPVATPYEGGTFQIDITLPD 67
           M+DFARVQKELQECS+D+EASGI+V PK+DNL  L GTIPGP+ TPYEGGTFQIDITLPD
Sbjct: 1   MIDFARVQKELQECSRDMEASGIKVAPKSDNLGRLTGTIPGPIGTPYEGGTFQIDITLPD 60

Query: 68  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDD 127
           GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAP+PDD
Sbjct: 61  GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPEPDD 120

Query: 128 PQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEAQVRSSLEAV 187
           PQDAVVAQQYLRDYQTF GTARYWTETFAKTSSLGVEEKVQKLVEMGFPEA  R +LE+V
Sbjct: 121 PQDAVVAQQYLRDYQTFVGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEALARGALESV 180

Query: 188 GWDENLALEKLCSG 202
           G DENLALEKLCSG
Sbjct: 181 GGDENLALEKLCSG 194

The following BLAST results are available for this feature:
BLAST of CmaCh10G000340 vs. Swiss-Prot
Match NameE-valueIdentityDescription
UBC27_ARATH3.9e-8678.24Ubiquitin-conjugating enzyme E2 27 OS=Arabidopsis thaliana GN=UBC27 PE=2 SV=1[more]
UBC21_CAEEL1.0e-4649.47Probable ubiquitin-conjugating enzyme E2 21 OS=Caenorhabditis elegans GN=ubc-21 ... [more]
UBE2K_MOUSE5.1e-4650.00Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=1 SV=3[more]
UBE2K_HUMAN5.1e-4650.00Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1 SV=3[more]
UBE2K_BOVIN5.1e-4650.00Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3[more]
BLAST of CmaCh10G000340 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LTY2_CUCSA2.4e-10395.88Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000740 PE=3 SV=1[more]
A0A067JF67_JATCU1.8e-9891.24Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26392 PE=3 SV=1[more]
B9RA92_RICCO6.9e-9891.24Ubiquitin-conjugating enzyme E2-25kD, putative OS=Ricinus communis GN=RCOM_15047... [more]
A9P939_POPTR1.7e-9689.69Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1[more]
B9I3X3_POPTR2.4e-9589.18Ubiquitin-conjugating enzyme family protein OS=Populus trichocarpa GN=POPTR_0012... [more]
BLAST of CmaCh10G000340 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G50870.27.8e-8574.02 ubiquitin-conjugating enzyme 27[more]
AT5G41700.49.7e-3549.31 ubiquitin conjugating enzyme 8[more]
AT3G08690.11.1e-3348.61 ubiquitin-conjugating enzyme 11[more]
AT4G27960.24.1e-3348.61 ubiquitin conjugating enzyme 9[more]
AT5G53300.14.1e-3348.61 ubiquitin-conjugating enzyme 10[more]
BLAST of CmaCh10G000340 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659128804|ref|XP_008464378.1|7.1e-10496.39PREDICTED: ubiquitin-conjugating enzyme E2 27 [Cucumis melo][more]
gi|449440514|ref|XP_004138029.1|3.5e-10395.88PREDICTED: ubiquitin-conjugating enzyme E2 27 [Cucumis sativus][more]
gi|802770435|ref|XP_012090621.1|2.6e-9891.24PREDICTED: ubiquitin-conjugating enzyme E2 27 [Jatropha curcas][more]
gi|255540105|ref|XP_002511117.1|9.9e-9891.24PREDICTED: ubiquitin-conjugating enzyme E2 27 [Ricinus communis][more]
gi|743916284|ref|XP_011002115.1|1.1e-9690.21PREDICTED: ubiquitin-conjugating enzyme E2 27-like [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR009060UBA-like_sf
IPR015940UBA
IPR016135UBQ-conjugating_enzyme/RWD
IPR023313UBQ-conjugating_AS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0000209 protein polyubiquitination
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
molecular_function GO:0016874 ligase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0061630 ubiquitin protein ligase activity
molecular_function GO:0031625 ubiquitin protein ligase binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh10G000340.1CmaCh10G000340.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 13..151
score: 4.1
IPR000608Ubiquitin-conjugating enzyme E2PROFILEPS50127UBIQUITIN_CONJUGAT_2coord: 12..146
score: 39
IPR009060UBA-likeunknownSSF46934UBA-likecoord: 162..201
score: 3.1
IPR015940Ubiquitin-associated domainPFAMPF00627UBAcoord: 164..198
score: 4.1
IPR015940Ubiquitin-associated domainSMARTSM00165uba_6coord: 163..200
score: 9.9
IPR015940Ubiquitin-associated domainPROFILEPS50030UBAcoord: 162..201
score: 12
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3DG3DSA:3.10.110.10coord: 10..164
score: 3.3
IPR016135Ubiquitin-conjugating enzyme/RWD-likeunknownSSF54495UBC-likecoord: 11..158
score: 1.74
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 83..99
scor
NoneNo IPR availableGENE3DG3DSA:1.10.8.10coord: 165..200
score: 1.
NoneNo IPR availablePANTHERPTHR24067UBIQUITIN-CONJUGATING ENZYME E2coord: 9..198
score: 2.9
NoneNo IPR availablePANTHERPTHR24067:SF29UBIQUITIN-CONJUGATING ENZYME E2 Kcoord: 9..198
score: 2.9
NoneNo IPR availableSMARTSM00212ubc_7coord: 12..157
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh10G000340Cucsa.157050Cucumber (Gy14) v1cgycmaB0433
CmaCh10G000340Cla019307Watermelon (97103) v1cmawmB072
CmaCh10G000340Csa1G000740Cucumber (Chinese Long) v2cmacuB048
CmaCh10G000340MELO3C026177Melon (DHL92) v3.5.1cmameB065
CmaCh10G000340ClCG06G018200Watermelon (Charleston Gray)cmawcgB072
CmaCh10G000340CSPI01G00240Wild cucumber (PI 183967)cmacpiB049
CmaCh10G000340CmoCh10G000300Cucurbita moschata (Rifu)cmacmoB067
CmaCh10G000340Lsi06G016680Bottle gourd (USVL1VR-Ls)cmalsiB072
CmaCh10G000340MELO3C026177.2Melon (DHL92) v3.6.1cmamedB068
CmaCh10G000340CsaV3_1G000230Cucumber (Chinese Long) v3cmacucB0058
CmaCh10G000340Cla97C06G127970Watermelon (97103) v2cmawmbB082
CmaCh10G000340Bhi02G000487Wax gourdcmawgoB0080
CmaCh10G000340CsGy1G000250Cucumber (Gy14) v2cgybcmaB004
CmaCh10G000340Carg10256Silver-seed gourdcarcmaB0510
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh10G000340Cucurbita maxima (Rimu)cmacmaB092
CmaCh10G000340Cucurbita maxima (Rimu)cmacmaB073
CmaCh10G000340Cucurbita maxima (Rimu)cmacmaB101
CmaCh10G000340Cucurbita moschata (Rifu)cmacmoB069
CmaCh10G000340Cucurbita moschata (Rifu)cmacmoB084
CmaCh10G000340Wild cucumber (PI 183967)cmacpiB063
CmaCh10G000340Cucumber (Chinese Long) v2cmacuB071
CmaCh10G000340Melon (DHL92) v3.5.1cmameB051
CmaCh10G000340Watermelon (Charleston Gray)cmawcgB061
CmaCh10G000340Watermelon (97103) v1cmawmB053
CmaCh10G000340Cucurbita pepo (Zucchini)cmacpeB080
CmaCh10G000340Cucurbita pepo (Zucchini)cmacpeB082
CmaCh10G000340Cucurbita pepo (Zucchini)cmacpeB094
CmaCh10G000340Bottle gourd (USVL1VR-Ls)cmalsiB056
CmaCh10G000340Cucumber (Gy14) v2cgybcmaB025
CmaCh10G000340Cucumber (Gy14) v2cgybcmaB289
CmaCh10G000340Melon (DHL92) v3.6.1cmamedB053
CmaCh10G000340Silver-seed gourdcarcmaB0686
CmaCh10G000340Silver-seed gourdcarcmaB0853
CmaCh10G000340Cucumber (Chinese Long) v3cmacucB0078
CmaCh10G000340Cucumber (Chinese Long) v3cmacucB0085
CmaCh10G000340Watermelon (97103) v2cmawmbB068
CmaCh10G000340Wax gourdcmawgoB0066