MELO3C035042.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAAAGTTTACATACTTTGTAAAGGATCAACAAACACTTCTTGCCGTCTTAACTGTGTTCACGCTGGTCCAACGTCAGATGTTACTAACGTTGGAGCTACTAATGAACGACAGTAGGCGTATCACACATACACCGTCCGATACACACCATAGAATAAGGCAGCTTGCGTACTTTCGCAAGATACACGAGTCAAATCTTGTGTGTTGCCAAAGCACGCGCATGGACAGACAAACATTCACAATTCTATTTCATTTACTTCGGATTGTTTCTGGTCTTTCGTCGACCGAGATTGTTGATGTTGAGGAAATGGTAGCAACGTTCTTGCACGTCCTTGCCCACGATGTGAAGAATCGCATCATTCAAAGGGAATTTGTACGGTCCAGTGAGACAGTATCTCGATATTTTAACCTTATACTGTTGGCTGTCGTTCGAATATACGAGGAGTTTATAGAAAGACTTATTTCGAGAACAAACAACTGCAATGATCAACGTTGGAAGTGTTTCGAGGTGGGCATGGTACAAGTTTAATGTATTTAAGCTTTAGGTGCGTGACACTTATTTCGACCTGTTTATTTCAGTCTATAGAATTGCTTTGGCGCCTTAGATGAGACGTACATAAAGGTGAACGTCCCCGCAGTAGATCGACCTACATTTACAACCTGTAAGGGGGAAATTGCCACAAATGTACTAGACGTCTGCGACACGAAAGGGGATTTCGTTTATGTCCTTGCCGGTTGGGAAGGATCCGTGGTAGACTCACAGATTCTACGTGATGCCCTTGCACGAGAAAATGGACTACGAGTGCCAAATGGTATTGTTTATTTATAATCAAACAACGCCCACTTCTACTTACATATTCAAAGTGCATAAATACATAGTTTTAATAACATGATATTATTATCTTTGCGGTGCAAGTTATCCAAACGCTGAGGAATTTCTCAGCCCATACAGAGGCCAACGGTACCACTTGCAAGAGTGGCATGGTGCTAGAAATGCACCAACAAATGCAAAGGAGTACTTCCACATGAAGCACTCTTCGGCAAGAAATGTCATTGAGTGCACCTTTGGTGTTCTTAAGGGTCGTTAGGTCATTCTTCGTGGAAAGTCGTACTATCCTTTGTAAGTCCAATGTCGCACCATACTAGCATGTTGCTTGCTTCACAATTTGATAAACAGAGAAATGACATTGTGACAAGGGGGACTCCACGTACACGATGACCACCGCTACAGAAGACATTCACTACATTGAAACGACAAAAGAATGGTCTTAGTGGTGCGACGAACTAGCTGAATCGATGTTCACAGATTGGCAGTTGCGTAACGCTTAGATAAGAAAATTTTACATTAGAAGTCATCAGTTGTATACGTATTTTATTAACCTGTAGAATGTACTGTTGCATATGAAATGTACGGGTACCATTTGTTTGTGACTGTTAAATGTGAAATTATGATATTACTAACGTACTCCATATATTTCTTGTAATTTGTCATTCTCAGTATGTCAACCTCAACCCGTGCCCCGAGGCATGTCTGGACGAAGGAGGAGGAAGGCACTCTTGTGGAGTGCTTAATGGAGTTGGTGTCAATGGGGGATGGAAATCCGATAATGGTACGTTCCGGCCAGGTTACCTGGCCCAGTTGGTATGCATGATGGCGGAGAAACTACCTGGATGTCGTGTCCGTACAACGACTGTAATTGACTGTAGAATAAAGATACTGAAGCAGACATTCCAGGTCATCGCCGAAATGCGGGGGCCAGCGTGTAGTGGCTTTGGGTGGAACGATGAAGAGAAATGCATAATTGCAGAGAAAGAATTATTTGATAATTGGATTAGGGTAAGGAAAATAATTAAACGGCACACGACATTCGTAATGTACATTTACTTTACAATTTTTCTATCAGTACTCATAAGTGATCCTTTTTTTCCCCGCAGTCGCATCCTACAGCGAAGGGACTCCTGAACAAATCATTTTCGTATTACGACGAGCTTACATATGTGTTCGGTCGTGATAAGGCGACGAGTCTGAGACATTCACCGACGTGGGGTCTAACGAGCCTGTCGGGTATGAAGGATTTGACATGACGGATGGAAACAAGGAGTTCCCACCCGTGTACAGCCAGGGGATTGACATGTCACAGGACGATGTATGTGCATCACGACCTTCTCACGCTTCAAAGGGTAGGACCTGA GAAAGTTTACATACTTTGTAAAGGATCAACAAACACTTCTTGCCGTCTTAACTGTGTTCACGCTGGTCCAACGTCAGATGTTACTAACGTTGGAGCTACTAATGAACGACAGTAGGCGTATCACACATACACCGTCCGATACACACCATAGAATAAGGCAGCTTGCGTACTTTCGCAAGATACACGAGTCAAATCTTGTGTGTTGCCAAAGCACGCGCATGGACAGACAAACATTCACAATTCTATTTCATTTACTTCGGATTGTTTCTGGTCTTTCGTCGACCGAGATTGTTGATGTTGAGGAAATGGTAGCAACGTTCTTGCACGTCCTTGCCCACGATGTGAAGAATCGCATCATTCAAAGGGAATTTGTACGGTCCAGTGAGACAGTATCTCGATATTTTAACCTTATACTGTTGGCTGTCGTTCGAATATACGAGGAGTTTATAGAAAGACTTATTTCGAGAACAAACAACTGCAATGATCAACGTTGGAAGTGTTTCGAGGTGGGCATGTATGTCAACCTCAACCCGTGCCCCGAGGCATGTCTGGACGAAGGAGGAGGAAGGCACTCTTGTGGAGTGCTTAATGGAGTTGGTGTCAATGGGGGATGGAAATCCGATAATGGTACGTTCCGGCCAGGTTACCTGGCCCAGTTGGTATGCATGATGGCGGAGAAACTACCTGGATGTCGTGTCCGTACAACGACTGTAATTGACTGTAGAATAAAGATACTGAAGCAGACATTCCAGGTCATCGCCGAAATGCGGGGGCCAGCGTGTAGTGGCTTTGGGTGGAACGATGAAGAGAAATGCATAATTGCAGAGAAAGAATTATTTGATAATTGGATTAGGTCGCATCCTACAGCGAAGGGACTCCTGAACAAATCATTTTCGTATTACGACGAGCTTACATATGTGTTCGGTCGCGACGAGTCTGAGACATTCACCGACGTGGGGTCTAACGAGCCTGTCGGGTATGAAGGATTTGACATGACGGATGGAAACAAGGAGTTCCCACCCGTGTACAGCCAGGGGATTGACATGTCACAGGACGATGTATGTGCATCACGACCTTCTCACGCTTCAAAGGGTAGGACCTGA ATGTTACTAACGTTGGAGCTACTAATGAACGACAGTAGGCGTATCACACATACACCGTCCGATACACACCATAGAATAAGGCAGCTTGCGTACTTTCGCAAGATACACGAGTCAAATCTTGTGTGTTGCCAAAGCACGCGCATGGACAGACAAACATTCACAATTCTATTTCATTTACTTCGGATTGTTTCTGGTCTTTCGTCGACCGAGATTGTTGATGTTGAGGAAATGGTAGCAACGTTCTTGCACGTCCTTGCCCACGATGTGAAGAATCGCATCATTCAAAGGGAATTTGTACGGTCCAGTGAGACAGTATCTCGATATTTTAACCTTATACTGTTGGCTGTCGTTCGAATATACGAGGAGTTTATAGAAAGACTTATTTCGAGAACAAACAACTGCAATGATCAACGTTGGAAGTGTTTCGAGGTGGGCATGTATGTCAACCTCAACCCGTGCCCCGAGGCATGTCTGGACGAAGGAGGAGGAAGGCACTCTTGTGGAGTGCTTAATGGAGTTGGTGTCAATGGGGGATGGAAATCCGATAATGGTACGTTCCGGCCAGGTTACCTGGCCCAGTTGGTATGCATGATGGCGGAGAAACTACCTGGATGTCGTGTCCGTACAACGACTGTAATTGACTGTAGAATAAAGATACTGAAGCAGACATTCCAGGTCATCGCCGAAATGCGGGGGCCAGCGTGTAGTGGCTTTGGGTGGAACGATGAAGAGAAATGCATAATTGCAGAGAAAGAATTATTTGATAATTGGATTAGGTCGCATCCTACAGCGAAGGGACTCCTGAACAAATCATTTTCGTATTACGACGAGCTTACATATGTGTTCGGTCGCGACGAGTCTGAGACATTCACCGACGTGGGGTCTAACGAGCCTGTCGGGTATGAAGGATTTGACATGACGGATGGAAACAAGGAGTTCCCACCCGTGTACAGCCAGGGGATTGACATGTCACAGGACGATGTATGTGCATCACGACCTTCTCACGCTTCAAAGGGTAGGACCTGA MLLTLELLMNDSRRITHTPSDTHHRIRQLAYFRKIHESNLVCCQSTRMDRQTFTILFHLLRIVSGLSSTEIVDVEEMVATFLHVLAHDVKNRIIQREFVRSSETVSRYFNLILLAVVRIYEEFIERLISRTNNCNDQRWKCFEVGMYVNLNPCPEACLDEGGGRHSCGVLNGVGVNGGWKSDNGTFRPGYLAQLVCMMAEKLPGCRVRTTTVIDCRIKILKQTFQVIAEMRGPACSGFGWNDEEKCIIAEKELFDNWIRSHPTAKGLLNKSFSYYDELTYVFGRDESETFTDVGSNEPVGYEGFDMTDGNKEFPPVYSQGIDMSQDDVCASRPSHASKGRT
BLAST of MELO3C035042.2.1 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 362.5 bits (929), Expect = 1.6e-96 Identity = 228/512 (44.53%), Postives = 256/512 (50.00%), Query Frame = 0
BLAST of MELO3C035042.2.1 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 270.4 bits (690), Expect = 8.4e-69 Identity = 185/560 (33.04%), Postives = 245/560 (43.75%), Query Frame = 0
BLAST of MELO3C035042.2.1 vs. NCBI nr
Match: XP_016899496.1 (PREDICTED: uncharacterized protein LOC107990551 [Cucumis melo]) HSP 1 Score: 222.2 bits (565), Expect = 2.6e-54 Identity = 112/143 (78.32%), Postives = 127/143 (88.81%), Query Frame = 0
BLAST of MELO3C035042.2.1 vs. NCBI nr
Match: XP_008466949.1 (PREDICTED: uncharacterized protein LOC103504332, partial [Cucumis melo]) HSP 1 Score: 210.3 bits (534), Expect = 1.0e-50 Identity = 97/162 (59.88%), Postives = 126/162 (77.78%), Query Frame = 0
BLAST of MELO3C035042.2.1 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]) HSP 1 Score: 203.8 bits (517), Expect = 9.6e-49 Identity = 98/172 (56.98%), Postives = 129/172 (75.00%), Query Frame = 0
BLAST of MELO3C035042.2.1 vs. TAIR10
Match: AT5G41980.1 (Putative harbinger transposase-derived nuclease (InterPro:IPR006912)) HSP 1 Score: 59.7 bits (143), Expect = 4.1e-09 Identity = 31/94 (32.98%), Postives = 55/94 (58.51%), Query Frame = 0
BLAST of MELO3C035042.2.1 vs. TAIR10
Match: AT5G28730.1 (unknown protein) HSP 1 Score: 46.6 bits (109), Expect = 3.6e-05 Identity = 32/88 (36.36%), Postives = 48/88 (54.55%), Query Frame = 0
BLAST of MELO3C035042.2.1 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 362.5 bits (929), Expect = 1.1e-96 Identity = 228/512 (44.53%), Postives = 256/512 (50.00%), Query Frame = 0
BLAST of MELO3C035042.2.1 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 5.5e-69 Identity = 185/560 (33.04%), Postives = 245/560 (43.75%), Query Frame = 0
BLAST of MELO3C035042.2.1 vs. TrEMBL
Match: tr|A0A1S4DU32|A0A1S4DU32_CUCME (uncharacterized protein LOC107990551 OS=Cucumis melo OX=3656 GN=LOC107990551 PE=4 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 1.7e-54 Identity = 112/143 (78.32%), Postives = 127/143 (88.81%), Query Frame = 0
BLAST of MELO3C035042.2.1 vs. TrEMBL
Match: tr|A0A1S3CTN6|A0A1S3CTN6_CUCME (uncharacterized protein LOC103504332 OS=Cucumis melo OX=3656 GN=LOC103504332 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 6.8e-51 Identity = 97/162 (59.88%), Postives = 126/162 (77.78%), Query Frame = 0
BLAST of MELO3C035042.2.1 vs. TrEMBL
Match: tr|A0A1S3B4L3|A0A1S3B4L3_CUCME (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 6.4e-49 Identity = 98/172 (56.98%), Postives = 129/172 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
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