MELO3C035042.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C035042.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionMyb/SANT-like DNA-binding domain protein
Locationchr11 : 18085252 .. 18087441 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAGTTTACATACTTTGTAAAGGATCAACAAACACTTCTTGCCGTCTTAACTGTGTTCACGCTGGTCCAACGTCAGATGTTACTAACGTTGGAGCTACTAATGAACGACAGTAGGCGTATCACACATACACCGTCCGATACACACCATAGAATAAGGCAGCTTGCGTACTTTCGCAAGATACACGAGTCAAATCTTGTGTGTTGCCAAAGCACGCGCATGGACAGACAAACATTCACAATTCTATTTCATTTACTTCGGATTGTTTCTGGTCTTTCGTCGACCGAGATTGTTGATGTTGAGGAAATGGTAGCAACGTTCTTGCACGTCCTTGCCCACGATGTGAAGAATCGCATCATTCAAAGGGAATTTGTACGGTCCAGTGAGACAGTATCTCGATATTTTAACCTTATACTGTTGGCTGTCGTTCGAATATACGAGGAGTTTATAGAAAGACTTATTTCGAGAACAAACAACTGCAATGATCAACGTTGGAAGTGTTTCGAGGTGGGCATGGTACAAGTTTAATGTATTTAAGCTTTAGGTGCGTGACACTTATTTCGACCTGTTTATTTCAGTCTATAGAATTGCTTTGGCGCCTTAGATGAGACGTACATAAAGGTGAACGTCCCCGCAGTAGATCGACCTACATTTACAACCTGTAAGGGGGAAATTGCCACAAATGTACTAGACGTCTGCGACACGAAAGGGGATTTCGTTTATGTCCTTGCCGGTTGGGAAGGATCCGTGGTAGACTCACAGATTCTACGTGATGCCCTTGCACGAGAAAATGGACTACGAGTGCCAAATGGTATTGTTTATTTATAATCAAACAACGCCCACTTCTACTTACATATTCAAAGTGCATAAATACATAGTTTTAATAACATGATATTATTATCTTTGCGGTGCAAGTTATCCAAACGCTGAGGAATTTCTCAGCCCATACAGAGGCCAACGGTACCACTTGCAAGAGTGGCATGGTGCTAGAAATGCACCAACAAATGCAAAGGAGTACTTCCACATGAAGCACTCTTCGGCAAGAAATGTCATTGAGTGCACCTTTGGTGTTCTTAAGGGTCGTTAGGTCATTCTTCGTGGAAAGTCGTACTATCCTTTGTAAGTCCAATGTCGCACCATACTAGCATGTTGCTTGCTTCACAATTTGATAAACAGAGAAATGACATTGTGACAAGGGGGACTCCACGTACACGATGACCACCGCTACAGAAGACATTCACTACATTGAAACGACAAAAGAATGGTCTTAGTGGTGCGACGAACTAGCTGAATCGATGTTCACAGATTGGCAGTTGCGTAACGCTTAGATAAGAAAATTTTACATTAGAAGTCATCAGTTGTATACGTATTTTATTAACCTGTAGAATGTACTGTTGCATATGAAATGTACGGGTACCATTTGTTTGTGACTGTTAAATGTGAAATTATGATATTACTAACGTACTCCATATATTTCTTGTAATTTGTCATTCTCAGTATGTCAACCTCAACCCGTGCCCCGAGGCATGTCTGGACGAAGGAGGAGGAAGGCACTCTTGTGGAGTGCTTAATGGAGTTGGTGTCAATGGGGGATGGAAATCCGATAATGGTACGTTCCGGCCAGGTTACCTGGCCCAGTTGGTATGCATGATGGCGGAGAAACTACCTGGATGTCGTGTCCGTACAACGACTGTAATTGACTGTAGAATAAAGATACTGAAGCAGACATTCCAGGTCATCGCCGAAATGCGGGGGCCAGCGTGTAGTGGCTTTGGGTGGAACGATGAAGAGAAATGCATAATTGCAGAGAAAGAATTATTTGATAATTGGATTAGGGTAAGGAAAATAATTAAACGGCACACGACATTCGTAATGTACATTTACTTTACAATTTTTCTATCAGTACTCATAAGTGATCCTTTTTTTCCCCGCAGTCGCATCCTACAGCGAAGGGACTCCTGAACAAATCATTTTCGTATTACGACGAGCTTACATATGTGTTCGGTCGTGATAAGGCGACGAGTCTGAGACATTCACCGACGTGGGGTCTAACGAGCCTGTCGGGTATGAAGGATTTGACATGACGGATGGAAACAAGGAGTTCCCACCCGTGTACAGCCAGGGGATTGACATGTCACAGGACGATGTATGTGCATCACGACCTTCTCACGCTTCAAAGGGTAGGACCTGA

mRNA sequence

GAAAGTTTACATACTTTGTAAAGGATCAACAAACACTTCTTGCCGTCTTAACTGTGTTCACGCTGGTCCAACGTCAGATGTTACTAACGTTGGAGCTACTAATGAACGACAGTAGGCGTATCACACATACACCGTCCGATACACACCATAGAATAAGGCAGCTTGCGTACTTTCGCAAGATACACGAGTCAAATCTTGTGTGTTGCCAAAGCACGCGCATGGACAGACAAACATTCACAATTCTATTTCATTTACTTCGGATTGTTTCTGGTCTTTCGTCGACCGAGATTGTTGATGTTGAGGAAATGGTAGCAACGTTCTTGCACGTCCTTGCCCACGATGTGAAGAATCGCATCATTCAAAGGGAATTTGTACGGTCCAGTGAGACAGTATCTCGATATTTTAACCTTATACTGTTGGCTGTCGTTCGAATATACGAGGAGTTTATAGAAAGACTTATTTCGAGAACAAACAACTGCAATGATCAACGTTGGAAGTGTTTCGAGGTGGGCATGTATGTCAACCTCAACCCGTGCCCCGAGGCATGTCTGGACGAAGGAGGAGGAAGGCACTCTTGTGGAGTGCTTAATGGAGTTGGTGTCAATGGGGGATGGAAATCCGATAATGGTACGTTCCGGCCAGGTTACCTGGCCCAGTTGGTATGCATGATGGCGGAGAAACTACCTGGATGTCGTGTCCGTACAACGACTGTAATTGACTGTAGAATAAAGATACTGAAGCAGACATTCCAGGTCATCGCCGAAATGCGGGGGCCAGCGTGTAGTGGCTTTGGGTGGAACGATGAAGAGAAATGCATAATTGCAGAGAAAGAATTATTTGATAATTGGATTAGGTCGCATCCTACAGCGAAGGGACTCCTGAACAAATCATTTTCGTATTACGACGAGCTTACATATGTGTTCGGTCGCGACGAGTCTGAGACATTCACCGACGTGGGGTCTAACGAGCCTGTCGGGTATGAAGGATTTGACATGACGGATGGAAACAAGGAGTTCCCACCCGTGTACAGCCAGGGGATTGACATGTCACAGGACGATGTATGTGCATCACGACCTTCTCACGCTTCAAAGGGTAGGACCTGA

Coding sequence (CDS)

ATGTTACTAACGTTGGAGCTACTAATGAACGACAGTAGGCGTATCACACATACACCGTCCGATACACACCATAGAATAAGGCAGCTTGCGTACTTTCGCAAGATACACGAGTCAAATCTTGTGTGTTGCCAAAGCACGCGCATGGACAGACAAACATTCACAATTCTATTTCATTTACTTCGGATTGTTTCTGGTCTTTCGTCGACCGAGATTGTTGATGTTGAGGAAATGGTAGCAACGTTCTTGCACGTCCTTGCCCACGATGTGAAGAATCGCATCATTCAAAGGGAATTTGTACGGTCCAGTGAGACAGTATCTCGATATTTTAACCTTATACTGTTGGCTGTCGTTCGAATATACGAGGAGTTTATAGAAAGACTTATTTCGAGAACAAACAACTGCAATGATCAACGTTGGAAGTGTTTCGAGGTGGGCATGTATGTCAACCTCAACCCGTGCCCCGAGGCATGTCTGGACGAAGGAGGAGGAAGGCACTCTTGTGGAGTGCTTAATGGAGTTGGTGTCAATGGGGGATGGAAATCCGATAATGGTACGTTCCGGCCAGGTTACCTGGCCCAGTTGGTATGCATGATGGCGGAGAAACTACCTGGATGTCGTGTCCGTACAACGACTGTAATTGACTGTAGAATAAAGATACTGAAGCAGACATTCCAGGTCATCGCCGAAATGCGGGGGCCAGCGTGTAGTGGCTTTGGGTGGAACGATGAAGAGAAATGCATAATTGCAGAGAAAGAATTATTTGATAATTGGATTAGGTCGCATCCTACAGCGAAGGGACTCCTGAACAAATCATTTTCGTATTACGACGAGCTTACATATGTGTTCGGTCGCGACGAGTCTGAGACATTCACCGACGTGGGGTCTAACGAGCCTGTCGGGTATGAAGGATTTGACATGACGGATGGAAACAAGGAGTTCCCACCCGTGTACAGCCAGGGGATTGACATGTCACAGGACGATGTATGTGCATCACGACCTTCTCACGCTTCAAAGGGTAGGACCTGA

Protein sequence

MLLTLELLMNDSRRITHTPSDTHHRIRQLAYFRKIHESNLVCCQSTRMDRQTFTILFHLLRIVSGLSSTEIVDVEEMVATFLHVLAHDVKNRIIQREFVRSSETVSRYFNLILLAVVRIYEEFIERLISRTNNCNDQRWKCFEVGMYVNLNPCPEACLDEGGGRHSCGVLNGVGVNGGWKSDNGTFRPGYLAQLVCMMAEKLPGCRVRTTTVIDCRIKILKQTFQVIAEMRGPACSGFGWNDEEKCIIAEKELFDNWIRSHPTAKGLLNKSFSYYDELTYVFGRDESETFTDVGSNEPVGYEGFDMTDGNKEFPPVYSQGIDMSQDDVCASRPSHASKGRT
Homology
[Close]
BLAST of MELO3C035042.2 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 362.5 bits (929), Expect = 1.6e-96
Identity = 228/512 (44.53%), Postives = 256/512 (50.00%), Query Frame = 0 

Query: 35  IHESNLVCCQSTRMDRQTFTILFHLLRIVSGLSSTEIVDVEEMVATFLHVLAHDVKNRII 94
           IHES+LVC QSTRMDR+TF IL HLLR V+GLSSTEIVDVEEMVA FLHVLAHDVKNR+I
Sbjct: 2   IHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVI 61

Query: 95  QREFVRSSETVSRYFNLILLAVVRIYEEFIERLISRTNNCNDQRWKCFE------VGMYV 154
           Q+EFVRS ETVSR+FN++LLAV+R+YEE I+R +  T+NCNDQRWKCFE       G Y+
Sbjct: 62  QQEFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFENCLGALDGTYI 121

Query: 155 NLN--------------------------------------------------------- 214
            +N                                                         
Sbjct: 122 KVNVPAGDRPTFRTRKGEIATNVLGVCDMKGDFVYVLAGWEGSAADSRILRDAISQENGL 181

Query: 215 --------------PCPEACL--------------------------------------- 274
                         P  E  L                                       
Sbjct: 182 QVPKGYYYLCDAGYPNAEGFLAPYKGQRYHLQEWRGAANAPTNAKEYFNMKHSSARNVIE 241

Query: 275 ---------------------------------------------------DEGG----- 334
                                                              DEG      
Sbjct: 242 RAFGVLKGRWTILRGKSYYPLQVQCRTILACTLLHNLINREMTYCNDVEDEDEGDSTYAT 301

[Close]
BLAST of MELO3C035042.2 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 270.4 bits (690), Expect = 8.4e-69
Identity = 185/560 (33.04%), Postives = 245/560 (43.75%), Query Frame = 0 

Query: 1   MLLTLELLMNDSRRITHTPSDTHHRIRQLAYFRKIHESNLVCCQSTRMDRQTFTILFHLL 60
           +LL LELL ND++RITH P +T HRIRQLAYFR IH +                      
Sbjct: 20  LLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGT---------------------- 79

Query: 61  RIVSGLSSTEIVDVEEMVATFLHVLAHDVKNRIIQREFVRSSETVSRYFNLILLAVVRIY 120
             ++GL+STE+VDVEEMVA FLH+LAHDVK+R+I+REF+RS ET+SR+FN++LLAV+R++
Sbjct: 80  --IAGLTSTEVVDVEEMVAMFLHILAHDVKSRVIKREFMRSGETISRHFNMVLLAVIRLH 139

Query: 121 EEFIERLISRTNNCNDQRWKCFE------VGMYVNLN----------------------- 180
           EE +++     N C DQRW+ FE       G Y+ +N                       
Sbjct: 140 EELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGV 199

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 200 CDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDVGYPNAEGFLAPYRG 259

Query: 241 -----------------------------------------------------PCPEAC- 300
                                                                P    C 
Sbjct: 260 QRYHLQEWRGPENAPSTSKEFFNMKHYSARNVIERAFGVLKGRWAILRGKSYYPVEVQCR 319

Query: 301 ------------------------LDEGGGRHSCGVLNGVG------------------- 341
                                   +DE    H+    + +                    
Sbjct: 320 TILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEI 379

[Close]
BLAST of MELO3C035042.2 vs. NCBI nr
Match: XP_016899496.1 (PREDICTED: uncharacterized protein LOC107990551 [Cucumis melo])

HSP 1 Score: 222.2 bits (565), Expect = 2.6e-54
Identity = 112/143 (78.32%), Postives = 127/143 (88.81%), Query Frame = 0 

Query: 1   MLLTLELLMNDSRRITHTPSDTHHRIRQLAYFRKIHESNLVCCQSTRMDRQTFTILFHLL 60
           +LLTLELLMND+RRIT+TP DT +RIRQLAYFR IHES+LVC QSTRMDR+TF IL HLL
Sbjct: 20  ILLTLELLMNDNRRITYTPFDTCNRIRQLAYFRMIHESDLVCRQSTRMDRRTFAILCHLL 79

Query: 61  RIVSGLSSTEIVDVEEMVATFLHVLAHDVKNRIIQREFVRSSETVSRYFNLILLAVVRIY 120
           R VS LSS EI+DVEEMVA FLHVLAHDVKN +IQR+FVRS ETVSR+FNL+LL VVR+Y
Sbjct: 80  RTVSVLSSIEIIDVEEMVAMFLHVLAHDVKNHVIQRKFVRSGETVSRHFNLVLLVVVRLY 139

Query: 121 EEFIERLISRTNNCNDQRWKCFE 144
           E+ I+R +S TNNCNDQRWKCFE
Sbjct: 140 EKLIKRPVSVTNNCNDQRWKCFE 162

[Close]
BLAST of MELO3C035042.2 vs. NCBI nr
Match: XP_008466949.1 (PREDICTED: uncharacterized protein LOC103504332, partial [Cucumis melo])

HSP 1 Score: 210.3 bits (534), Expect = 1.0e-50
Identity = 97/162 (59.88%), Postives = 126/162 (77.78%), Query Frame = 0 

Query: 177 GGWKSDNGTFRPGYLAQLVCMMAEKLPGCRVRTTTVIDCRIKILKQTFQVIAEMRGPACS 236
           GGW+SDNGTFRPGYL QL  MMA K+PG  +  +T ID RIK++K+ F  +AEMRGP CS
Sbjct: 27  GGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHAST-IDSRIKLMKRMFHALAEMRGPNCS 86

Query: 237 GFGWNDEEKCIIAEKELFDNWIRSHPTAKGLLNKSFSYYDELTYVFGRD-----ESETFT 296
           GFGWNDE+KCI+AEKE+FD+W++SHPTAKGLLNKSF +YDEL+YVFG+D      +E+F 
Sbjct: 87  GFGWNDEKKCIVAEKEVFDDWVKSHPTAKGLLNKSFVHYDELSYVFGKDRATGGRAESFA 146

Query: 297 DVGSNEPVGYEGFDM-TDGNKEFPPVYSQGIDMSQDDVCASR 333
           D+GSN+P GY+ F      + +FPP+YS  ++MS DD+  +R
Sbjct: 147 DIGSNDPPGYDAFAADAMPDTDFPPMYSLRLNMSPDDLMETR 187

[Close]
BLAST of MELO3C035042.2 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo])

HSP 1 Score: 203.8 bits (517), Expect = 9.6e-49
Identity = 98/172 (56.98%), Postives = 129/172 (75.00%), Query Frame = 0 

Query: 176 NGGWKSDNGTFRPGYLAQLVCMMAEKLPGCRVRTTTVIDCRIKILKQTFQVIAEMRGPAC 235
           +GGW+SDNGTF+PGYLAQL  MMAEKLPG  ++ ++ IDC +K LK+T+  IAEMRGP+C
Sbjct: 30  SGGWRSDNGTFQPGYLAQLQRMMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSC 89

Query: 236 SGFGWNDEEKCIIAEKELFDNWIRSHPTAKGLLNKSFSYYDELTYVFGRD-----ESETF 295
           SGFGWN+E +CIIAE++LFD+WI+SHP AKGLL+KSF YYD+L+YVFG+D      SETF
Sbjct: 90  SGFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETF 149

Query: 296 TDVGSN-EPVGYEGFDMTDGNKE-FPPVYSQGIDMSQDDVCASRPSHASKGR 341
            +VGSN   +  +   + D + E  P +YSQG+ MS D++   R   AS+ R
Sbjct: 150 PNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQGVHMSPDEMFGIRAGQASERR 201

[Close]
BLAST of MELO3C035042.2 vs. TAIR10
Match: AT5G41980.1 (Putative harbinger transposase-derived nuclease (InterPro:IPR006912))

HSP 1 Score: 59.7 bits (143), Expect = 4.1e-09
Identity = 31/94 (32.98%), Postives = 55/94 (58.51%), Query Frame = 0 

Query: 32  FRKIHESNLVCCQSTRMDRQTFTILFHLLRIVSGLSSTEIVDVEEMVATFLHVLAHDVKN 91
           ++ ++  N  C ++ RMD+  F  L  LL+    L  T  + +E  +A FL ++ H+++ 
Sbjct: 32  YQILNGPNEQCFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRT 91

Query: 92  RIIQREFVRSSETVSRYFNLILLAVVRIYEEFIE 126
           R +Q  F  S ET+SR+FN +L AV+ I ++F +
Sbjct: 92  RAVQELFCYSGETISRHFNNVLNAVIAISKDFFQ 125

[Close]
BLAST of MELO3C035042.2 vs. TAIR10
Match: AT5G28730.1 (unknown protein)

HSP 1 Score: 46.6 bits (109), Expect = 3.6e-05
Identity = 32/88 (36.36%), Postives = 48/88 (54.55%), Query Frame = 0 

Query: 38  SNLVCCQS-TRMDRQTFTILFHLLRIVSGLSSTEIVDVEEMVATFLHVLAHDVKNRIIQR 97
           SN V CQ+  RM  + FT L  +L    GL S+  + ++E VA FL + A +   R I  
Sbjct: 19  SNEVSCQTLIRMSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDTQRDIAL 78

Query: 98  EFVRSSETVSRYFNLILLAVVRIYEEFI 125
            F  + ET+ R F+ +L A+ R+  E+I
Sbjct: 79  RFGHAQETIWRKFHDVLKAMERLAVEYI 106

[Close]
BLAST of MELO3C035042.2 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.1e-96
Identity = 228/512 (44.53%), Postives = 256/512 (50.00%), Query Frame = 0 

Query: 35  IHESNLVCCQSTRMDRQTFTILFHLLRIVSGLSSTEIVDVEEMVATFLHVLAHDVKNRII 94
           IHES+LVC QSTRMDR+TF IL HLLR V+GLSSTEIVDVEEMVA FLHVLAHDVKNR+I
Sbjct: 2   IHESDLVCRQSTRMDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVI 61

Query: 95  QREFVRSSETVSRYFNLILLAVVRIYEEFIERLISRTNNCNDQRWKCFE------VGMYV 154
           Q+EFVRS ETVSR+FN++LLAV+R+YEE I+R +  T+NCNDQRWKCFE       G Y+
Sbjct: 62  QQEFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFENCLGALDGTYI 121

Query: 155 NLN--------------------------------------------------------- 214
            +N                                                         
Sbjct: 122 KVNVPAGDRPTFRTRKGEIATNVLGVCDMKGDFVYVLAGWEGSAADSRILRDAISQENGL 181

Query: 215 --------------PCPEACL--------------------------------------- 274
                         P  E  L                                       
Sbjct: 182 QVPKGYYYLCDAGYPNAEGFLAPYKGQRYHLQEWRGAANAPTNAKEYFNMKHSSARNVIE 241

Query: 275 ---------------------------------------------------DEGG----- 334
                                                              DEG      
Sbjct: 242 RAFGVLKGRWTILRGKSYYPLQVQCRTILACTLLHNLINREMTYCNDVEDEDEGDSTYAT 301

[Close]
BLAST of MELO3C035042.2 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 5.5e-69
Identity = 185/560 (33.04%), Postives = 245/560 (43.75%), Query Frame = 0 

Query: 1   MLLTLELLMNDSRRITHTPSDTHHRIRQLAYFRKIHESNLVCCQSTRMDRQTFTILFHLL 60
           +LL LELL ND++RITH P +T HRIRQLAYFR IH +                      
Sbjct: 20  LLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGT---------------------- 79

Query: 61  RIVSGLSSTEIVDVEEMVATFLHVLAHDVKNRIIQREFVRSSETVSRYFNLILLAVVRIY 120
             ++GL+STE+VDVEEMVA FLH+LAHDVK+R+I+REF+RS ET+SR+FN++LLAV+R++
Sbjct: 80  --IAGLTSTEVVDVEEMVAMFLHILAHDVKSRVIKREFMRSGETISRHFNMVLLAVIRLH 139

Query: 121 EEFIERLISRTNNCNDQRWKCFE------VGMYVNLN----------------------- 180
           EE +++     N C DQRW+ FE       G Y+ +N                       
Sbjct: 140 EELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGV 199

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 200 CDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDVGYPNAEGFLAPYRG 259

Query: 241 -----------------------------------------------------PCPEAC- 300
                                                                P    C 
Sbjct: 260 QRYHLQEWRGPENAPSTSKEFFNMKHYSARNVIERAFGVLKGRWAILRGKSYYPVEVQCR 319

Query: 301 ------------------------LDEGGGRHSCGVLNGVG------------------- 341
                                   +DE    H+    + +                    
Sbjct: 320 TILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEI 379

[Close]
BLAST of MELO3C035042.2 vs. TrEMBL
Match: tr|A0A1S4DU32|A0A1S4DU32_CUCME (uncharacterized protein LOC107990551 OS=Cucumis melo OX=3656 GN=LOC107990551 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.7e-54
Identity = 112/143 (78.32%), Postives = 127/143 (88.81%), Query Frame = 0 

Query: 1   MLLTLELLMNDSRRITHTPSDTHHRIRQLAYFRKIHESNLVCCQSTRMDRQTFTILFHLL 60
           +LLTLELLMND+RRIT+TP DT +RIRQLAYFR IHES+LVC QSTRMDR+TF IL HLL
Sbjct: 20  ILLTLELLMNDNRRITYTPFDTCNRIRQLAYFRMIHESDLVCRQSTRMDRRTFAILCHLL 79

Query: 61  RIVSGLSSTEIVDVEEMVATFLHVLAHDVKNRIIQREFVRSSETVSRYFNLILLAVVRIY 120
           R VS LSS EI+DVEEMVA FLHVLAHDVKN +IQR+FVRS ETVSR+FNL+LL VVR+Y
Sbjct: 80  RTVSVLSSIEIIDVEEMVAMFLHVLAHDVKNHVIQRKFVRSGETVSRHFNLVLLVVVRLY 139

Query: 121 EEFIERLISRTNNCNDQRWKCFE 144
           E+ I+R +S TNNCNDQRWKCFE
Sbjct: 140 EKLIKRPVSVTNNCNDQRWKCFE 162

[Close]
BLAST of MELO3C035042.2 vs. TrEMBL
Match: tr|A0A1S3CTN6|A0A1S3CTN6_CUCME (uncharacterized protein LOC103504332 OS=Cucumis melo OX=3656 GN=LOC103504332 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 6.8e-51
Identity = 97/162 (59.88%), Postives = 126/162 (77.78%), Query Frame = 0 

Query: 177 GGWKSDNGTFRPGYLAQLVCMMAEKLPGCRVRTTTVIDCRIKILKQTFQVIAEMRGPACS 236
           GGW+SDNGTFRPGYL QL  MMA K+PG  +  +T ID RIK++K+ F  +AEMRGP CS
Sbjct: 27  GGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHAST-IDSRIKLMKRMFHALAEMRGPNCS 86

Query: 237 GFGWNDEEKCIIAEKELFDNWIRSHPTAKGLLNKSFSYYDELTYVFGRD-----ESETFT 296
           GFGWNDE+KCI+AEKE+FD+W++SHPTAKGLLNKSF +YDEL+YVFG+D      +E+F 
Sbjct: 87  GFGWNDEKKCIVAEKEVFDDWVKSHPTAKGLLNKSFVHYDELSYVFGKDRATGGRAESFA 146

Query: 297 DVGSNEPVGYEGFDM-TDGNKEFPPVYSQGIDMSQDDVCASR 333
           D+GSN+P GY+ F      + +FPP+YS  ++MS DD+  +R
Sbjct: 147 DIGSNDPPGYDAFAADAMPDTDFPPMYSLRLNMSPDDLMETR 187

[Close]
BLAST of MELO3C035042.2 vs. TrEMBL
Match: tr|A0A1S3B4L3|A0A1S3B4L3_CUCME (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 6.4e-49
Identity = 98/172 (56.98%), Postives = 129/172 (75.00%), Query Frame = 0 

Query: 176 NGGWKSDNGTFRPGYLAQLVCMMAEKLPGCRVRTTTVIDCRIKILKQTFQVIAEMRGPAC 235
           +GGW+SDNGTF+PGYLAQL  MMAEKLPG  ++ ++ IDC +K LK+T+  IAEMRGP+C
Sbjct: 30  SGGWRSDNGTFQPGYLAQLQRMMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSC 89

Query: 236 SGFGWNDEEKCIIAEKELFDNWIRSHPTAKGLLNKSFSYYDELTYVFGRD-----ESETF 295
           SGFGWN+E +CIIAE++LFD+WI+SHP AKGLL+KSF YYD+L+YVFG+D      SETF
Sbjct: 90  SGFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETF 149

Query: 296 TDVGSN-EPVGYEGFDMTDGNKE-FPPVYSQGIDMSQDDVCASRPSHASKGR 341
            +VGSN   +  +   + D + E  P +YSQG+ MS D++   R   AS+ R
Sbjct: 150 PNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQGVHMSPDEMFGIRAGQASERR 201

The following BLAST results are available for this feature:
BLAST of MELO3C035042.2 vs. NCBI nr
Match NameE-valueIdentityDescription
ADN33754.11.6e-9644.53retrotransposon protein [Cucumis melo subsp. melo][more]
ADN34114.18.4e-6933.04retrotransposon protein [Cucumis melo subsp. melo][more]
XP_016899496.12.6e-5478.32PREDICTED: uncharacterized protein LOC107990551 [Cucumis melo][more]
XP_008466949.11.0e-5059.88PREDICTED: uncharacterized protein LOC103504332, partial [Cucumis melo][more]
XP_008441954.19.6e-4956.98PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo][more]
BLAST of MELO3C035042.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G41980.14.1e-0932.98Putative harbinger transposase-derived nuclease (InterPro:IPR006912)[more]
AT5G28730.13.6e-0536.36unknown protein[more]
BLAST of MELO3C035042.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C035042.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|E5GBB2|E5GBB2_CUCME1.1e-9644.53Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|E5GCB5|E5GCB5_CUCME5.5e-6933.04Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A1S4DU32|A0A1S4DU32_CUCME1.7e-5478.32uncharacterized protein LOC107990551 OS=Cucumis melo OX=3656 GN=LOC107990551 PE=... [more]
tr|A0A1S3CTN6|A0A1S3CTN6_CUCME6.8e-5159.88uncharacterized protein LOC103504332 OS=Cucumis melo OX=3656 GN=LOC103504332 PE=... [more]
tr|A0A1S3B4L3|A0A1S3B4L3_CUCME6.4e-4956.98uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035042.2.1MELO3C035042.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 322..341
NoneNo IPR availablePANTHERPTHR31704FAMILY NOT NAMEDcoord: 170..295
NoneNo IPR availablePANTHERPTHR31704:SF62SUBFAMILY NOT NAMEDcoord: 170..295

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C035042.2Cucurbita maxima (Rimu)cmamedB585
MELO3C035042.2Cucurbita maxima (Rimu)cmamedB619
MELO3C035042.2Cucurbita moschata (Rifu)cmomedB572
MELO3C035042.2Cucurbita moschata (Rifu)cmomedB608
MELO3C035042.2Cucurbita pepo (Zucchini)cpemedB297
MELO3C035042.2Cucurbita pepo (Zucchini)cpemedB803
MELO3C035042.2Wild cucumber (PI 183967)cpimedB429
MELO3C035042.2Bottle gourd (USVL1VR-Ls)lsimedB051
MELO3C035042.2Watermelon (Charleston Gray)medwcgB098
MELO3C035042.2Watermelon (97103) v1medwmB112
MELO3C035042.2Silver-seed gourdcarmedB0031
MELO3C035042.2Silver-seed gourdcarmedB0424
MELO3C035042.2Watermelon (97103) v2medwmbB098
MELO3C035042.2Wax gourdmedwgoB123