MELO3C024487.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAACGGGCACCAACCACTGTCCGCCCAATTACAACCTCCCTAGAGACAATGGTGGATGGTGCAATCCCCCACTCGAGCATTTCGACATTGCGAAGCCTGTTTTCCTCAACATTGCTGAGTTCAAGGCTGGCATTGTCCCTGTCACTTACCGCAGGTAT ATGGTAACGGGCACCAACCACTGTCCGCCCAATTACAACCTCCCTAGAGACAATGGTGGATGGTGCAATCCCCCACTCGAGCATTTCGACATTGCGAAGCCTGTTTTCCTCAACATTGCTGAGTTCAAGGCTGGCATTGTCCCTGTCACTTACCGCAGGTAT ATGGTAACGGGCACCAACCACTGTCCGCCCAATTACAACCTCCCTAGAGACAATGGTGGATGGTGCAATCCCCCACTCGAGCATTTCGACATTGCGAAGCCTGTTTTCCTCAACATTGCTGAGTTCAAGGCTGGCATTGTCCCTGTCACTTACCGCAGGTAT MVTGTNHCPPNYNLPRDNGGWCNPPLEHFDIAKPVFLNIAEFKAGIVPVTYRRY
BLAST of MELO3C024487.2 vs. NCBI nr
Match: XP_008462508.1 (PREDICTED: expansin-A9-like [Cucumis melo]) HSP 1 Score: 124.0 bits (310), Expect = 1.5e-25 Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of MELO3C024487.2 vs. NCBI nr
Match: XP_004143366.1 (PREDICTED: expansin-A3-like [Cucumis sativus] >KGN48207.1 hypothetical protein Csa_6G448160 [Cucumis sativus]) HSP 1 Score: 118.6 bits (296), Expect = 6.4e-24 Identity = 49/53 (92.45%), Postives = 52/53 (98.11%), Query Frame = 0
BLAST of MELO3C024487.2 vs. NCBI nr
Match: XP_022925799.1 (expansin-A9-like [Cucurbita moschata]) HSP 1 Score: 109.8 bits (273), Expect = 3.0e-21 Identity = 42/53 (79.25%), Postives = 49/53 (92.45%), Query Frame = 0
BLAST of MELO3C024487.2 vs. NCBI nr
Match: XP_023543964.1 (expansin-A9-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 109.8 bits (273), Expect = 3.0e-21 Identity = 42/53 (79.25%), Postives = 49/53 (92.45%), Query Frame = 0
BLAST of MELO3C024487.2 vs. NCBI nr
Match: XP_004306268.2 (PREDICTED: expansin-A9-like [Fragaria vesca subsp. vesca]) HSP 1 Score: 108.2 bits (269), Expect = 8.7e-21 Identity = 45/52 (86.54%), Postives = 47/52 (90.38%), Query Frame = 0
BLAST of MELO3C024487.2 vs. TAIR10
Match: AT5G02260.1 (expansin A9) HSP 1 Score: 95.1 bits (235), Expect = 1.4e-20 Identity = 37/53 (69.81%), Postives = 46/53 (86.79%), Query Frame = 0
BLAST of MELO3C024487.2 vs. TAIR10
Match: AT2G39700.1 (expansin A4) HSP 1 Score: 93.6 bits (231), Expect = 4.0e-20 Identity = 37/53 (69.81%), Postives = 44/53 (83.02%), Query Frame = 0
BLAST of MELO3C024487.2 vs. TAIR10
Match: AT1G26770.2 (expansin A10) HSP 1 Score: 91.7 bits (226), Expect = 1.5e-19 Identity = 37/53 (69.81%), Postives = 45/53 (84.91%), Query Frame = 0
BLAST of MELO3C024487.2 vs. TAIR10
Match: AT3G55500.1 (expansin A16) HSP 1 Score: 91.7 bits (226), Expect = 1.5e-19 Identity = 37/52 (71.15%), Postives = 42/52 (80.77%), Query Frame = 0
BLAST of MELO3C024487.2 vs. TAIR10
Match: AT2G40610.1 (expansin A8) HSP 1 Score: 91.3 bits (225), Expect = 2.0e-19 Identity = 36/52 (69.23%), Postives = 44/52 (84.62%), Query Frame = 0
BLAST of MELO3C024487.2 vs. Swiss-Prot
Match: sp|Q852A1|EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA7 PE=2 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 6.6e-20 Identity = 38/53 (71.70%), Postives = 46/53 (86.79%), Query Frame = 0
BLAST of MELO3C024487.2 vs. Swiss-Prot
Match: sp|Q9LZ99|EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana OX=3702 GN=EXPA9 PE=2 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 2.5e-19 Identity = 37/53 (69.81%), Postives = 46/53 (86.79%), Query Frame = 0
BLAST of MELO3C024487.2 vs. Swiss-Prot
Match: sp|O48818|EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana OX=3702 GN=EXPA4 PE=1 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 7.3e-19 Identity = 37/53 (69.81%), Postives = 44/53 (83.02%), Query Frame = 0
BLAST of MELO3C024487.2 vs. Swiss-Prot
Match: sp|A2Y5R6|EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica OX=39946 GN=EXPA4 PE=2 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 1.6e-18 Identity = 36/52 (69.23%), Postives = 45/52 (86.54%), Query Frame = 0
BLAST of MELO3C024487.2 vs. Swiss-Prot
Match: sp|Q0DHB7|EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA4 PE=2 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 1.6e-18 Identity = 36/52 (69.23%), Postives = 45/52 (86.54%), Query Frame = 0
BLAST of MELO3C024487.2 vs. TrEMBL
Match: tr|A0A1S3CH49|A0A1S3CH49_CUCME (Expansin OS=Cucumis melo OX=3656 GN=LOC103500844 PE=3 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.0e-25 Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of MELO3C024487.2 vs. TrEMBL
Match: tr|A0A0A0KIG7|A0A0A0KIG7_CUCSA (Expansin OS=Cucumis sativus OX=3659 GN=Csa_6G448160 PE=3 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 4.3e-24 Identity = 49/53 (92.45%), Postives = 52/53 (98.11%), Query Frame = 0
BLAST of MELO3C024487.2 vs. TrEMBL
Match: tr|A0A2P6RB60|A0A2P6RB60_ROSCH (Expansin OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0470931 PE=3 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 5.8e-21 Identity = 45/52 (86.54%), Postives = 47/52 (90.38%), Query Frame = 0
BLAST of MELO3C024487.2 vs. TrEMBL
Match: tr|A0A199UQM8|A0A199UQM8_ANACO (Malate dehydrogenase (NADP), chloroplastic OS=Ananas comosus OX=4615 GN=ACMD2_11949 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 6.4e-20 Identity = 43/53 (81.13%), Postives = 46/53 (86.79%), Query Frame = 0
BLAST of MELO3C024487.2 vs. TrEMBL
Match: tr|A0A2G2VUT3|A0A2G2VUT3_CAPBA (Expansin OS=Capsicum baccatum OX=33114 GN=CQW23_24448 PE=3 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 4.1e-19 Identity = 41/53 (77.36%), Postives = 46/53 (86.79%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |