MELO3C032051.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTTAGAAGGAACTGATGGAAGAGAGCGAGGAGAGGTGCACTTCTATGCCCTTTTATTGGTTTTTATGTGTTTCTTTTGCTTGTACTTTCGTTTATTTTTTCCTTTTTATTTTTATTTATTTTTATTTTTCCACAAATGTGTTTGTCAATGTTTTGAATTCAGTATATCATTGCATGCTTCTTTTTGCAGATACACGTATGTGTATGTTTATATTTCTGTATGTGTGTGTATGTAAGGATATGTTTATATTCGCATACATATGTATCTTAGCTTTATTGTTTCCACATTGCCTTGTTTAAGAAGTTGTTATAATTTAATTTAGGTGGTGTCACGATATTGGCCATGAGCAGGCTGCAAATAAGCCTCTCCTCAAAACTGTATTCAGGTATTCCCTTTAATCTGGTTGGGGGTCATGGTGTATCTTTTATAGTATTAATTTAATAAATTTTAGTTGTTGTTGTATGCAGGTCATGATGAGATTGTTCAGTCCACATAAAACAACACTAATGTTTGTCATACGTGATAAAACAAGGGTTTGTTAATATTTCCTGGGTAGTTTATATCTTGAGCTGTTGTAGAAAAACCATATGTTGCAAGCTTTTAATTTTCTAATTTTCTTTATTGCTTTTGTTATTTTTTTCTGTATGTAGATGCCATTGGAAAATTTAGAGTCTGTTATTAGAGGATGTACATAAGGTAAATTATTG ATGGATTTAGAAGGAACTGATGGAAGAGAGCGAGGAGAGGTGCACTTCTATGCCCTTTTATTGGTTTTTATATACACGTGGTGTCACGATATTGGCCATGAGCAGGCTGCAAATAAGCCTCTCCTCAAAACTGTCATGATGAGATTGTTCAGTCCACATAAAACAACACTAATGTTTGTCATACGTGATAAAACAAGGATGCCATTGGAAAATTTAGAGTCTGTTATTAGAGGATGTACATAAGGTAAATTATTG ATGGATTTAGAAGGAACTGATGGAAGAGAGCGAGGAGAGGTGCACTTCTATGCCCTTTTATTGGTTTTTATATACACGTGGTGTCACGATATTGGCCATGAGCAGGCTGCAAATAAGCCTCTCCTCAAAACTGTCATGATGAGATTGTTCAGTCCACATAAAACAACACTAATGTTTGTCATACGTGATAAAACAAGGATGCCATTGGAAAATTTAGAGTCTGTTATTAGAGGATGTACATAA MDLEGTDGRERGEVHFYALLLVFIYTWCHDIGHEQAANKPLLKTVMMRLFSPHKTTLMFVIRDKTRMPLENLESVIRGCT
BLAST of MELO3C032051.2.1 vs. NCBI nr
Match: ONM40609.1 (Protein ROOT HAIR DEFECTIVE 3 [Zea mays]) HSP 1 Score: 115.9 bits (289), Expect = 6.2e-23 Identity = 60/88 (68.18%), Postives = 66/88 (75.00%), Query Frame = 0
BLAST of MELO3C032051.2.1 vs. NCBI nr
Match: ONM40608.1 (Protein ROOT HAIR DEFECTIVE 3 [Zea mays]) HSP 1 Score: 115.9 bits (289), Expect = 6.2e-23 Identity = 60/88 (68.18%), Postives = 66/88 (75.00%), Query Frame = 0
BLAST of MELO3C032051.2.1 vs. NCBI nr
Match: ONM40596.1 (Protein ROOT HAIR DEFECTIVE 3 [Zea mays] >ONM40602.1 Protein ROOT HAIR DEFECTIVE 3 [Zea mays]) HSP 1 Score: 115.9 bits (289), Expect = 6.2e-23 Identity = 60/88 (68.18%), Postives = 66/88 (75.00%), Query Frame = 0
BLAST of MELO3C032051.2.1 vs. NCBI nr
Match: AQK96218.1 (Protein ROOT HAIR DEFECTIVE 3 [Zea mays] >PWZ11121.1 hypothetical protein Zm00014a_034991 [Zea mays] >PWZ11122.1 Protein ROOT HAIR DEFECTIVE 3 [Zea mays]) HSP 1 Score: 115.9 bits (289), Expect = 6.2e-23 Identity = 60/88 (68.18%), Postives = 66/88 (75.00%), Query Frame = 0
BLAST of MELO3C032051.2.1 vs. NCBI nr
Match: PWZ33891.1 (Protein ROOT HAIR DEFECTIVE 3 [Zea mays] >PWZ33892.1 hypothetical protein Zm00014a_042861 [Zea mays]) HSP 1 Score: 115.9 bits (289), Expect = 6.2e-23 Identity = 60/88 (68.18%), Postives = 66/88 (75.00%), Query Frame = 0
BLAST of MELO3C032051.2.1 vs. TAIR10
Match: AT3G13870.1 (Root hair defective 3 GTP-binding protein (RHD3)) HSP 1 Score: 113.6 bits (283), Expect = 5.6e-26 Identity = 63/91 (69.23%), Postives = 66/91 (72.53%), Query Frame = 0
BLAST of MELO3C032051.2.1 vs. TAIR10
Match: AT1G72960.1 (Root hair defective 3 GTP-binding protein (RHD3)) HSP 1 Score: 111.7 bits (278), Expect = 2.1e-25 Identity = 61/91 (67.03%), Postives = 66/91 (72.53%), Query Frame = 0
BLAST of MELO3C032051.2.1 vs. TAIR10
Match: AT5G45160.1 (Root hair defective 3 GTP-binding protein (RHD3)) HSP 1 Score: 103.6 bits (257), Expect = 5.8e-23 Identity = 56/91 (61.54%), Postives = 64/91 (70.33%), Query Frame = 0
BLAST of MELO3C032051.2.1 vs. Swiss-Prot
Match: sp|P93042|RHD3_ARATH (Protein ROOT HAIR DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RHD3 PE=1 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 1.0e-24 Identity = 63/91 (69.23%), Postives = 66/91 (72.53%), Query Frame = 0
BLAST of MELO3C032051.2.1 vs. Swiss-Prot
Match: sp|Q9SSN0|RHD31_ARATH (Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At1g72960 PE=2 SV=2) HSP 1 Score: 111.7 bits (278), Expect = 3.8e-24 Identity = 61/91 (67.03%), Postives = 66/91 (72.53%), Query Frame = 0
BLAST of MELO3C032051.2.1 vs. Swiss-Prot
Match: sp|Q2QMH2|RHD31_ORYSJ (Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0604600 PE=2 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 6.5e-24 Identity = 61/91 (67.03%), Postives = 66/91 (72.53%), Query Frame = 0
BLAST of MELO3C032051.2.1 vs. Swiss-Prot
Match: sp|Q0JLS6|RHD3_ORYSJ (Protein ROOT HAIR DEFECTIVE 3 OS=Oryza sativa subsp. japonica OX=39947 GN=RHD3 PE=2 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 1.9e-23 Identity = 59/91 (64.84%), Postives = 66/91 (72.53%), Query Frame = 0
BLAST of MELO3C032051.2.1 vs. Swiss-Prot
Match: sp|Q9FKE9|RHD32_ARATH (Protein ROOT HAIR DEFECTIVE 3 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At5g45160 PE=2 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 1.0e-21 Identity = 56/91 (61.54%), Postives = 64/91 (70.33%), Query Frame = 0
BLAST of MELO3C032051.2.1 vs. TrEMBL
Match: tr|A0A1D6NK21|A0A1D6NK21_MAIZE (Protein ROOT HAIR DEFECTIVE 3 homolog OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d044271 PE=3 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 4.1e-23 Identity = 60/88 (68.18%), Postives = 66/88 (75.00%), Query Frame = 0
BLAST of MELO3C032051.2.1 vs. TrEMBL
Match: tr|A0A1D6NK28|A0A1D6NK28_MAIZE (Protein ROOT HAIR DEFECTIVE 3 homolog OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d044271 PE=3 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 4.1e-23 Identity = 60/88 (68.18%), Postives = 66/88 (75.00%), Query Frame = 0
BLAST of MELO3C032051.2.1 vs. TrEMBL
Match: tr|A0A1D6NK19|A0A1D6NK19_MAIZE (Protein ROOT HAIR DEFECTIVE 3 homolog OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d044271 PE=3 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 4.1e-23 Identity = 60/88 (68.18%), Postives = 66/88 (75.00%), Query Frame = 0
BLAST of MELO3C032051.2.1 vs. TrEMBL
Match: tr|A0A1D6FXZ3|A0A1D6FXZ3_MAIZE (Protein ROOT HAIR DEFECTIVE 3 homolog OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d011213 PE=3 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 4.1e-23 Identity = 60/88 (68.18%), Postives = 66/88 (75.00%), Query Frame = 0
BLAST of MELO3C032051.2.1 vs. TrEMBL
Match: tr|A0A2G3B370|A0A2G3B370_CAPCH (Protein ROOT HAIR DEFECTIVE 3 OS=Capsicum chinense OX=80379 GN=BC332_30700 PE=3 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 1.6e-22 Identity = 63/91 (69.23%), Postives = 66/91 (72.53%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
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