MELO3C032051.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C032051.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionprotein ROOT HAIR DEFECTIVE 3
Locationchr06 : 16379962 .. 16380673 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTAGAAGGAACTGATGGAAGAGAGCGAGGAGAGGTGCACTTCTATGCCCTTTTATTGGTTTTTATGTGTTTCTTTTGCTTGTACTTTCGTTTATTTTTTCCTTTTTATTTTTATTTATTTTTATTTTTCCACAAATGTGTTTGTCAATGTTTTGAATTCAGTATATCATTGCATGCTTCTTTTTGCAGATACACGTATGTGTATGTTTATATTTCTGTATGTGTGTGTATGTAAGGATATGTTTATATTCGCATACATATGTATCTTAGCTTTATTGTTTCCACATTGCCTTGTTTAAGAAGTTGTTATAATTTAATTTAGGTGGTGTCACGATATTGGCCATGAGCAGGCTGCAAATAAGCCTCTCCTCAAAACTGTATTCAGGTATTCCCTTTAATCTGGTTGGGGGTCATGGTGTATCTTTTATAGTATTAATTTAATAAATTTTAGTTGTTGTTGTATGCAGGTCATGATGAGATTGTTCAGTCCACATAAAACAACACTAATGTTTGTCATACGTGATAAAACAAGGGTTTGTTAATATTTCCTGGGTAGTTTATATCTTGAGCTGTTGTAGAAAAACCATATGTTGCAAGCTTTTAATTTTCTAATTTTCTTTATTGCTTTTGTTATTTTTTTCTGTATGTAGATGCCATTGGAAAATTTAGAGTCTGTTATTAGAGGATGTACATAAGGTAAATTATTG

mRNA sequence

ATGGATTTAGAAGGAACTGATGGAAGAGAGCGAGGAGAGGTGCACTTCTATGCCCTTTTATTGGTTTTTATATACACGTGGTGTCACGATATTGGCCATGAGCAGGCTGCAAATAAGCCTCTCCTCAAAACTGTCATGATGAGATTGTTCAGTCCACATAAAACAACACTAATGTTTGTCATACGTGATAAAACAAGGATGCCATTGGAAAATTTAGAGTCTGTTATTAGAGGATGTACATAAGGTAAATTATTG

Coding sequence (CDS)

ATGGATTTAGAAGGAACTGATGGAAGAGAGCGAGGAGAGGTGCACTTCTATGCCCTTTTATTGGTTTTTATATACACGTGGTGTCACGATATTGGCCATGAGCAGGCTGCAAATAAGCCTCTCCTCAAAACTGTCATGATGAGATTGTTCAGTCCACATAAAACAACACTAATGTTTGTCATACGTGATAAAACAAGGATGCCATTGGAAAATTTAGAGTCTGTTATTAGAGGATGTACATAA

Protein sequence

MDLEGTDGRERGEVHFYALLLVFIYTWCHDIGHEQAANKPLLKTVMMRLFSPHKTTLMFVIRDKTRMPLENLESVIRGCT
Homology
[Close]
BLAST of MELO3C032051.2 vs. NCBI nr
Match: ONM40609.1 (Protein ROOT HAIR DEFECTIVE 3 [Zea mays])

HSP 1 Score: 115.9 bits (289), Expect = 6.2e-23
Identity = 60/88 (68.18%), Postives = 66/88 (75.00%), Query Frame = 0 

Query: 1   MDLEGTDGRERGE--------VHFYALL---LVFIYTWCHDIGHEQAANKPLLKTVMMRL 60
           MDLEGTDGRERGE           +AL    +V I  WCHDIG EQAANKPLLKTVMMRL
Sbjct: 117 MDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVMMRL 176

Query: 61  FSPHKTTLMFVIRDKTRMPLENLESVIR 78
           FSP KTTL+FVIRDK+R PLENLE ++R
Sbjct: 177 FSPRKTTLLFVIRDKSRTPLENLEPILR 204

[Close]
BLAST of MELO3C032051.2 vs. NCBI nr
Match: ONM40608.1 (Protein ROOT HAIR DEFECTIVE 3 [Zea mays])

HSP 1 Score: 115.9 bits (289), Expect = 6.2e-23
Identity = 60/88 (68.18%), Postives = 66/88 (75.00%), Query Frame = 0 

Query: 1   MDLEGTDGRERGE--------VHFYALL---LVFIYTWCHDIGHEQAANKPLLKTVMMRL 60
           MDLEGTDGRERGE           +AL    +V I  WCHDIG EQAANKPLLKTVMMRL
Sbjct: 102 MDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVMMRL 161

Query: 61  FSPHKTTLMFVIRDKTRMPLENLESVIR 78
           FSP KTTL+FVIRDK+R PLENLE ++R
Sbjct: 162 FSPRKTTLLFVIRDKSRTPLENLEPILR 189

[Close]
BLAST of MELO3C032051.2 vs. NCBI nr
Match: ONM40596.1 (Protein ROOT HAIR DEFECTIVE 3 [Zea mays] >ONM40602.1 Protein ROOT HAIR DEFECTIVE 3 [Zea mays])

HSP 1 Score: 115.9 bits (289), Expect = 6.2e-23
Identity = 60/88 (68.18%), Postives = 66/88 (75.00%), Query Frame = 0 

Query: 1   MDLEGTDGRERGE--------VHFYALL---LVFIYTWCHDIGHEQAANKPLLKTVMMRL 60
           MDLEGTDGRERGE           +AL    +V I  WCHDIG EQAANKPLLKTVMMRL
Sbjct: 102 MDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVMMRL 161

Query: 61  FSPHKTTLMFVIRDKTRMPLENLESVIR 78
           FSP KTTL+FVIRDK+R PLENLE ++R
Sbjct: 162 FSPRKTTLLFVIRDKSRTPLENLEPILR 189

[Close]
BLAST of MELO3C032051.2 vs. NCBI nr
Match: AQK96218.1 (Protein ROOT HAIR DEFECTIVE 3 [Zea mays] >PWZ11121.1 hypothetical protein Zm00014a_034991 [Zea mays] >PWZ11122.1 Protein ROOT HAIR DEFECTIVE 3 [Zea mays])

HSP 1 Score: 115.9 bits (289), Expect = 6.2e-23
Identity = 60/88 (68.18%), Postives = 66/88 (75.00%), Query Frame = 0 

Query: 1   MDLEGTDGRERGE--------VHFYALL---LVFIYTWCHDIGHEQAANKPLLKTVMMRL 60
           MDLEGTDGRERGE           +AL    +V I  WCHDIG EQAANKPLLKTVMMRL
Sbjct: 93  MDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVMMRL 152

Query: 61  FSPHKTTLMFVIRDKTRMPLENLESVIR 78
           FSP KTTL+FVIRDK+R PLENLE ++R
Sbjct: 153 FSPRKTTLLFVIRDKSRTPLENLEPILR 180

[Close]
BLAST of MELO3C032051.2 vs. NCBI nr
Match: PWZ33891.1 (Protein ROOT HAIR DEFECTIVE 3 [Zea mays] >PWZ33892.1 hypothetical protein Zm00014a_042861 [Zea mays])

HSP 1 Score: 115.9 bits (289), Expect = 6.2e-23
Identity = 60/88 (68.18%), Postives = 66/88 (75.00%), Query Frame = 0 

Query: 1   MDLEGTDGRERGE--------VHFYALL---LVFIYTWCHDIGHEQAANKPLLKTVMMRL 60
           MDLEGTDGRERGE           +AL    +V I  WCHDIG EQAANKPLLKTVMMRL
Sbjct: 117 MDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVMMRL 176

Query: 61  FSPHKTTLMFVIRDKTRMPLENLESVIR 78
           FSP KTTL+FVIRDK+R PLENLE ++R
Sbjct: 177 FSPRKTTLLFVIRDKSRTPLENLEPILR 204

[Close]
BLAST of MELO3C032051.2 vs. TAIR10
Match: AT3G13870.1 (Root hair defective 3 GTP-binding protein (RHD3))

HSP 1 Score: 113.6 bits (283), Expect = 5.6e-26
Identity = 63/91 (69.23%), Postives = 66/91 (72.53%), Query Frame = 0 

Query: 1   MDLEGTDGRERGE--------VHFYALL---LVFIYTWCHDIGHEQAANKPLLKT---VM 60
           MDLEGTDGRERGE           +AL    +V I  WCHDIG EQAANKPLLKT   VM
Sbjct: 93  MDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVM 152

Query: 61  MRLFSPHKTTLMFVIRDKTRMPLENLESVIR 78
           MRLFSP KTTLMFVIRDKTR PLENLE V+R
Sbjct: 153 MRLFSPRKTTLMFVIRDKTRTPLENLEPVLR 183

[Close]
BLAST of MELO3C032051.2 vs. TAIR10
Match: AT1G72960.1 (Root hair defective 3 GTP-binding protein (RHD3))

HSP 1 Score: 111.7 bits (278), Expect = 2.1e-25
Identity = 61/91 (67.03%), Postives = 66/91 (72.53%), Query Frame = 0 

Query: 1   MDLEGTDGRERGE--------VHFYALL---LVFIYTWCHDIGHEQAANKPLLKT---VM 60
           MDLEGTDGRERGE           +AL    +V I  WCHDIG EQAANKPLLKT   VM
Sbjct: 98  MDLEGTDGRERGEDDTAFEKQSALFALAISDIVLINMWCHDIGREQAANKPLLKTVFQVM 157

Query: 61  MRLFSPHKTTLMFVIRDKTRMPLENLESVIR 78
           MRLFSP KTT++FVIRDKTR PLENLE V+R
Sbjct: 158 MRLFSPRKTTMLFVIRDKTRTPLENLEPVLR 188

[Close]
BLAST of MELO3C032051.2 vs. TAIR10
Match: AT5G45160.1 (Root hair defective 3 GTP-binding protein (RHD3))

HSP 1 Score: 103.6 bits (257), Expect = 5.8e-23
Identity = 56/91 (61.54%), Postives = 64/91 (70.33%), Query Frame = 0 

Query: 1   MDLEGTDGRERGE--------VHFYALL---LVFIYTWCHDIGHEQAANKPLLKT---VM 60
           MDLEGTDGRERGE           +A+    +V I  WCHDIG EQAANKPLLKT   VM
Sbjct: 96  MDLEGTDGRERGEDDTTFEKQSALFAIAVADIVLINMWCHDIGREQAANKPLLKTVFQVM 155

Query: 61  MRLFSPHKTTLMFVIRDKTRMPLENLESVIR 78
           +RLFSP KTTL+FVIRDKT+ P+E LE  +R
Sbjct: 156 LRLFSPRKTTLLFVIRDKTKTPIELLERALR 186

[Close]
BLAST of MELO3C032051.2 vs. Swiss-Prot
Match: sp|P93042|RHD3_ARATH (Protein ROOT HAIR DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RHD3 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.0e-24
Identity = 63/91 (69.23%), Postives = 66/91 (72.53%), Query Frame = 0 

Query: 1   MDLEGTDGRERGE--------VHFYALL---LVFIYTWCHDIGHEQAANKPLLKT---VM 60
           MDLEGTDGRERGE           +AL    +V I  WCHDIG EQAANKPLLKT   VM
Sbjct: 93  MDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVM 152

Query: 61  MRLFSPHKTTLMFVIRDKTRMPLENLESVIR 78
           MRLFSP KTTLMFVIRDKTR PLENLE V+R
Sbjct: 153 MRLFSPRKTTLMFVIRDKTRTPLENLEPVLR 183

[Close]
BLAST of MELO3C032051.2 vs. Swiss-Prot
Match: sp|Q9SSN0|RHD31_ARATH (Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At1g72960 PE=2 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 3.8e-24
Identity = 61/91 (67.03%), Postives = 66/91 (72.53%), Query Frame = 0 

Query: 1   MDLEGTDGRERGE--------VHFYALL---LVFIYTWCHDIGHEQAANKPLLKT---VM 60
           MDLEGTDGRERGE           +AL    +V I  WCHDIG EQAANKPLLKT   VM
Sbjct: 98  MDLEGTDGRERGEDDTAFEKQSALFALAISDIVLINMWCHDIGREQAANKPLLKTVFQVM 157

Query: 61  MRLFSPHKTTLMFVIRDKTRMPLENLESVIR 78
           MRLFSP KTT++FVIRDKTR PLENLE V+R
Sbjct: 158 MRLFSPRKTTMLFVIRDKTRTPLENLEPVLR 188

[Close]
BLAST of MELO3C032051.2 vs. Swiss-Prot
Match: sp|Q2QMH2|RHD31_ORYSJ (Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0604600 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 6.5e-24
Identity = 61/91 (67.03%), Postives = 66/91 (72.53%), Query Frame = 0 

Query: 1   MDLEGTDGRERGE--------VHFYALL---LVFIYTWCHDIGHEQAANKPLLKT---VM 60
           MDLEGTDGRERGE           +AL    +V I  WCHDIG EQAANKPLLKT   VM
Sbjct: 96  MDLEGTDGRERGEDDTAFEKQSSLFALAISDIVLINMWCHDIGREQAANKPLLKTVFQVM 155

Query: 61  MRLFSPHKTTLMFVIRDKTRMPLENLESVIR 78
           MRLFSP KTTL+FVIRDKTR PLE+LE V+R
Sbjct: 156 MRLFSPRKTTLLFVIRDKTRTPLEHLEPVLR 186

[Close]
BLAST of MELO3C032051.2 vs. Swiss-Prot
Match: sp|Q0JLS6|RHD3_ORYSJ (Protein ROOT HAIR DEFECTIVE 3 OS=Oryza sativa subsp. japonica OX=39947 GN=RHD3 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.9e-23
Identity = 59/91 (64.84%), Postives = 66/91 (72.53%), Query Frame = 0 

Query: 1   MDLEGTDGRERGE--------VHFYALL---LVFIYTWCHDIGHEQAANKPLLKT---VM 60
           MDLEGTDGRERGE           +AL    +V I  WCHDIG EQAANKPLLKT   VM
Sbjct: 93  MDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVM 152

Query: 61  MRLFSPHKTTLMFVIRDKTRMPLENLESVIR 78
           MRLFSP KTTL+FVIRDK++ PLENLE ++R
Sbjct: 153 MRLFSPRKTTLLFVIRDKSKTPLENLEPILR 183

[Close]
BLAST of MELO3C032051.2 vs. Swiss-Prot
Match: sp|Q9FKE9|RHD32_ARATH (Protein ROOT HAIR DEFECTIVE 3 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At5g45160 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.0e-21
Identity = 56/91 (61.54%), Postives = 64/91 (70.33%), Query Frame = 0 

Query: 1   MDLEGTDGRERGE--------VHFYALL---LVFIYTWCHDIGHEQAANKPLLKT---VM 60
           MDLEGTDGRERGE           +A+    +V I  WCHDIG EQAANKPLLKT   VM
Sbjct: 96  MDLEGTDGRERGEDDTTFEKQSALFAIAVADIVLINMWCHDIGREQAANKPLLKTVFQVM 155

Query: 61  MRLFSPHKTTLMFVIRDKTRMPLENLESVIR 78
           +RLFSP KTTL+FVIRDKT+ P+E LE  +R
Sbjct: 156 LRLFSPRKTTLLFVIRDKTKTPIELLERALR 186

[Close]
BLAST of MELO3C032051.2 vs. TrEMBL
Match: tr|A0A1D6NK21|A0A1D6NK21_MAIZE (Protein ROOT HAIR DEFECTIVE 3 homolog OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d044271 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.1e-23
Identity = 60/88 (68.18%), Postives = 66/88 (75.00%), Query Frame = 0 

Query: 1   MDLEGTDGRERGE--------VHFYALL---LVFIYTWCHDIGHEQAANKPLLKTVMMRL 60
           MDLEGTDGRERGE           +AL    +V I  WCHDIG EQAANKPLLKTVMMRL
Sbjct: 102 MDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVMMRL 161

Query: 61  FSPHKTTLMFVIRDKTRMPLENLESVIR 78
           FSP KTTL+FVIRDK+R PLENLE ++R
Sbjct: 162 FSPRKTTLLFVIRDKSRTPLENLEPILR 189

[Close]
BLAST of MELO3C032051.2 vs. TrEMBL
Match: tr|A0A1D6NK28|A0A1D6NK28_MAIZE (Protein ROOT HAIR DEFECTIVE 3 homolog OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d044271 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.1e-23
Identity = 60/88 (68.18%), Postives = 66/88 (75.00%), Query Frame = 0 

Query: 1   MDLEGTDGRERGE--------VHFYALL---LVFIYTWCHDIGHEQAANKPLLKTVMMRL 60
           MDLEGTDGRERGE           +AL    +V I  WCHDIG EQAANKPLLKTVMMRL
Sbjct: 117 MDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVMMRL 176

Query: 61  FSPHKTTLMFVIRDKTRMPLENLESVIR 78
           FSP KTTL+FVIRDK+R PLENLE ++R
Sbjct: 177 FSPRKTTLLFVIRDKSRTPLENLEPILR 204

[Close]
BLAST of MELO3C032051.2 vs. TrEMBL
Match: tr|A0A1D6NK19|A0A1D6NK19_MAIZE (Protein ROOT HAIR DEFECTIVE 3 homolog OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d044271 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.1e-23
Identity = 60/88 (68.18%), Postives = 66/88 (75.00%), Query Frame = 0 

Query: 1   MDLEGTDGRERGE--------VHFYALL---LVFIYTWCHDIGHEQAANKPLLKTVMMRL 60
           MDLEGTDGRERGE           +AL    +V I  WCHDIG EQAANKPLLKTVMMRL
Sbjct: 102 MDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVMMRL 161

Query: 61  FSPHKTTLMFVIRDKTRMPLENLESVIR 78
           FSP KTTL+FVIRDK+R PLENLE ++R
Sbjct: 162 FSPRKTTLLFVIRDKSRTPLENLEPILR 189

[Close]
BLAST of MELO3C032051.2 vs. TrEMBL
Match: tr|A0A1D6FXZ3|A0A1D6FXZ3_MAIZE (Protein ROOT HAIR DEFECTIVE 3 homolog OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d011213 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.1e-23
Identity = 60/88 (68.18%), Postives = 66/88 (75.00%), Query Frame = 0 

Query: 1   MDLEGTDGRERGE--------VHFYALL---LVFIYTWCHDIGHEQAANKPLLKTVMMRL 60
           MDLEGTDGRERGE           +AL    +V I  WCHDIG EQAANKPLLKTVMMRL
Sbjct: 93  MDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVMMRL 152

Query: 61  FSPHKTTLMFVIRDKTRMPLENLESVIR 78
           FSP KTTL+FVIRDK+R PLENLE ++R
Sbjct: 153 FSPRKTTLLFVIRDKSRTPLENLEPILR 180

[Close]
BLAST of MELO3C032051.2 vs. TrEMBL
Match: tr|A0A2G3B370|A0A2G3B370_CAPCH (Protein ROOT HAIR DEFECTIVE 3 OS=Capsicum chinense OX=80379 GN=BC332_30700 PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.6e-22
Identity = 63/91 (69.23%), Postives = 66/91 (72.53%), Query Frame = 0 

Query: 1   MDLEGTDGRERGE--------VHFYALL---LVFIYTWCHDIGHEQAANKPLLKT---VM 60
           MDLEGTDGRERGE           +AL    +V I  WCHDIG EQAANKPLLKT   VM
Sbjct: 29  MDLEGTDGRERGEDDTTFEKQSSLFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVM 88

Query: 61  MRLFSPHKTTLMFVIRDKTRMPLENLESVIR 78
           MRLFSP KTTLMFVIRDKTR PLENLE V+R
Sbjct: 89  MRLFSPRKTTLMFVIRDKTRTPLENLEPVLR 119

The following BLAST results are available for this feature:
BLAST of MELO3C032051.2 vs. NCBI nr
Match NameE-valueIdentityDescription
ONM40609.16.2e-2368.18Protein ROOT HAIR DEFECTIVE 3 [Zea mays][more]
ONM40608.16.2e-2368.18Protein ROOT HAIR DEFECTIVE 3 [Zea mays][more]
ONM40596.16.2e-2368.18Protein ROOT HAIR DEFECTIVE 3 [Zea mays] >ONM40602.1 Protein ROOT HAIR DEFECTIVE... [more]
AQK96218.16.2e-2368.18Protein ROOT HAIR DEFECTIVE 3 [Zea mays] >PWZ11121.1 hypothetical protein Zm0001... [more]
PWZ33891.16.2e-2368.18Protein ROOT HAIR DEFECTIVE 3 [Zea mays] >PWZ33892.1 hypothetical protein Zm0001... [more]
BLAST of MELO3C032051.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G13870.15.6e-2669.23Root hair defective 3 GTP-binding protein (RHD3)[more]
AT1G72960.12.1e-2567.03Root hair defective 3 GTP-binding protein (RHD3)[more]
AT5G45160.15.8e-2361.54Root hair defective 3 GTP-binding protein (RHD3)[more]
BLAST of MELO3C032051.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P93042|RHD3_ARATH1.0e-2469.23Protein ROOT HAIR DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RHD3 PE=1 SV=1[more]
sp|Q9SSN0|RHD31_ARATH3.8e-2467.03Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At1g7... [more]
sp|Q2QMH2|RHD31_ORYSJ6.5e-2467.03Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Oryza sativa subsp. japonica OX=39947... [more]
sp|Q0JLS6|RHD3_ORYSJ1.9e-2364.84Protein ROOT HAIR DEFECTIVE 3 OS=Oryza sativa subsp. japonica OX=39947 GN=RHD3 P... [more]
sp|Q9FKE9|RHD32_ARATH1.0e-2161.54Protein ROOT HAIR DEFECTIVE 3 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At5g4... [more]
BLAST of MELO3C032051.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1D6NK21|A0A1D6NK21_MAIZE4.1e-2368.18Protein ROOT HAIR DEFECTIVE 3 homolog OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d04... [more]
tr|A0A1D6NK28|A0A1D6NK28_MAIZE4.1e-2368.18Protein ROOT HAIR DEFECTIVE 3 homolog OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d04... [more]
tr|A0A1D6NK19|A0A1D6NK19_MAIZE4.1e-2368.18Protein ROOT HAIR DEFECTIVE 3 homolog OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d04... [more]
tr|A0A1D6FXZ3|A0A1D6FXZ3_MAIZE4.1e-2368.18Protein ROOT HAIR DEFECTIVE 3 homolog OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d01... [more]
tr|A0A2G3B370|A0A2G3B370_CAPCH1.6e-2269.23Protein ROOT HAIR DEFECTIVE 3 OS=Capsicum chinense OX=80379 GN=BC332_30700 PE=3 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008803RHD3/Sey1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005789 endoplasmic reticulum membrane
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032051.2.1MELO3C032051.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008803RHD3/Sey1PFAMPF05879RHD3coord: 1..77
e-value: 2.7E-25
score: 88.6
NoneNo IPR availablePANTHERPTHR11649:SF62PROTEIN ROOT HAIR DEFECTIVE 3coord: 1..75
NoneNo IPR availablePANTHERPTHR11649MSS1/TRME-RELATED GTP-BINDING PROTEINcoord: 1..75

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C032051.2Watermelon (97103) v1medwmB448
MELO3C032051.2Watermelon (97103) v1medwmB462
MELO3C032051.2Silver-seed gourdcarmedB0489
MELO3C032051.2Cucumber (Chinese Long) v3cucmedB247
MELO3C032051.2Watermelon (97103) v2medwmbB424
MELO3C032051.2Watermelon (97103) v2medwmbB437
MELO3C032051.2Wax gourdmedwgoB540
MELO3C032051.2Wax gourdmedwgoB546
MELO3C032051.2Cucumber (Gy14) v2cgybmedB216
MELO3C032051.2Cucurbita maxima (Rimu)cmamedB274
MELO3C032051.2Cucurbita maxima (Rimu)cmamedB496
MELO3C032051.2Cucurbita moschata (Rifu)cmomedB259
MELO3C032051.2Cucurbita moschata (Rifu)cmomedB261
MELO3C032051.2Cucurbita moschata (Rifu)cmomedB483
MELO3C032051.2Cucurbita pepo (Zucchini)cpemedB630
MELO3C032051.2Cucurbita pepo (Zucchini)cpemedB692
MELO3C032051.2Cucurbita pepo (Zucchini)cpemedB694
MELO3C032051.2Wild cucumber (PI 183967)cpimedB240
MELO3C032051.2Cucumber (Chinese Long) v2cumedB239
MELO3C032051.2Bottle gourd (USVL1VR-Ls)lsimedB384
MELO3C032051.2Bottle gourd (USVL1VR-Ls)lsimedB406
MELO3C032051.2Watermelon (Charleston Gray)medwcgB417
MELO3C032051.2Watermelon (Charleston Gray)medwcgB431