MELO3C020289.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTACATGAAAATGCCCTCTTCCGCCGCCATTTTACTCTCCTTTTCTTTCCTCTCCCTCCTCCTTCTTCTCGCCCACTCTCAAACCTCCTCCCCGATATCAATAGATCCTCAAAATCCCGACGCTGAGATCAAATGTGGATCATGCCCTTGTTCCAATCCATGTATTCAACAATTATCACCGCCACCGCCACCGCCTCCTTCTCCTTGTACCCCAACGGTGTCCTCTCGACCACCGCCTCCTAGGTTTATTTATACCATGTCATCACCTGCACCACCGCCTCCAAGGTTTACTTACACGACGGGTGTTCCCGGTAATTTATACGAGATTGATGCGAATAATAGCTGGTATTACTTCTCTGGCACGACGAGGACGCGGCCTGGCATGGCGGCGGTTGTGGTGGCGCTTGGCTGTGGAGCTTTGCATCTAATGGGGTTTAGTAAGTGGTGAAGGATGAATAGCCATATAAAGAAAATTATTGATTAATGTGTTGAATTTGGTCTAATTACTAAAAGAAATATTTACTCTTAGTTCATAAAGTATTAAGTATATATATGTATGCTATATGATCTTAATGATTAGATGTCTATTTATTTACCTTTTCTCAAC ATTACATGAAAATGCCCTCTTCCGCCGCCATTTTACTCTCCTTTTCTTTCCTCTCCCTCCTCCTTCTTCTCGCCCACTCTCAAACCTCCTCCCCGATATCAATAGATCCTCAAAATCCCGACGCTGAGATCAAATGTGGATCATGCCCTTGTTCCAATCCATGTATTCAACAATTATCACCGCCACCGCCACCGCCTCCTTCTCCTTGTACCCCAACGGTGTCCTCTCGACCACCGCCTCCTAGGTTTATTTATACCATGTCATCACCTGCACCACCGCCTCCAAGGTTTACTTACACGACGGGTGTTCCCGGTAATTTATACGAGATTGATGCGAATAATAGCTGGTATTACTTCTCTGGCACGACGAGGACGCGGCCTGGCATGGCGGCGGTTGTGGTGGCGCTTGGCTGTGGAGCTTTGCATCTAATGGGGTTTAGTAAGTGGTGAAGGATGAATAGCCATATAAAGAAAATTATTGATTAATGTGTTGAATTTGGTCTAATTACTAAAAGAAATATTTACTCTTAGTTCATAAAGTATTAAGTATATATATGTATGCTATATGATCTTAATGATTAGATGTCTATTTATTTACCTTTTCTCAAC ATGAAAATGCCCTCTTCCGCCGCCATTTTACTCTCCTTTTCTTTCCTCTCCCTCCTCCTTCTTCTCGCCCACTCTCAAACCTCCTCCCCGATATCAATAGATCCTCAAAATCCCGACGCTGAGATCAAATGTGGATCATGCCCTTGTTCCAATCCATGTATTCAACAATTATCACCGCCACCGCCACCGCCTCCTTCTCCTTGTACCCCAACGGTGTCCTCTCGACCACCGCCTCCTAGGTTTATTTATACCATGTCATCACCTGCACCACCGCCTCCAAGGTTTACTTACACGACGGGTGTTCCCGGTAATTTATACGAGATTGATGCGAATAATAGCTGGTATTACTTCTCTGGCACGACGAGGACGCGGCCTGGCATGGCGGCGGTTGTGGTGGCGCTTGGCTGTGGAGCTTTGCATCTAATGGGGTTTAGTAAGTGGTGA MKMPSSAAILLSFSFLSLLLLLAHSQTSSPISIDPQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPSPCTPTVSSRPPPPRFIYTMSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGTTRTRPGMAAVVVALGCGALHLMGFSKW
BLAST of MELO3C020289.2.1 vs. NCBI nr
Match: XP_011651408.1 (PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis sativus] >KGN57843.1 hypothetical protein Csa_3G346900 [Cucumis sativus]) HSP 1 Score: 173.3 bits (438), Expect = 6.0e-40 Identity = 133/152 (87.50%), Postives = 136/152 (89.47%), Query Frame = 0
BLAST of MELO3C020289.2.1 vs. NCBI nr
Match: XP_023528316.1 (leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 125.2 bits (313), Expect = 1.9e-25 Identity = 106/147 (72.11%), Postives = 115/147 (78.23%), Query Frame = 0
BLAST of MELO3C020289.2.1 vs. NCBI nr
Match: XP_022984145.1 (probable pathogenesis-related protein ARB_02861 [Cucurbita maxima]) HSP 1 Score: 120.9 bits (302), Expect = 3.5e-24 Identity = 106/145 (73.10%), Postives = 116/145 (80.00%), Query Frame = 0
BLAST of MELO3C020289.2.1 vs. NCBI nr
Match: XP_023525793.1 (uncharacterized protein LOC111789303 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 80.9 bits (198), Expect = 4.1e-12 Identity = 69/147 (46.94%), Postives = 75/147 (51.02%), Query Frame = 0
BLAST of MELO3C020289.2.1 vs. NCBI nr
Match: XP_022949046.1 (leucine-rich repeat extensin-like protein 2 [Cucurbita moschata]) HSP 1 Score: 74.7 bits (182), Expect = 2.9e-10 Identity = 74/147 (50.34%), Postives = 81/147 (55.10%), Query Frame = 0
BLAST of MELO3C020289.2.1 vs. TrEMBL
Match: tr|A0A0A0L7R0|A0A0A0L7R0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G346900 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 4.0e-40 Identity = 133/152 (87.50%), Postives = 136/152 (89.47%), Query Frame = 0
BLAST of MELO3C020289.2.1 vs. TrEMBL
Match: tr|A0A2I4EB49|A0A2I4EB49_9ROSI (probable pathogenesis-related protein ARB_02861 OS=Juglans regia OX=51240 GN=LOC108987996 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.5e-04 Identity = 59/108 (54.63%), Postives = 71/108 (65.74%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
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