MELO3C019481.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGGGTCGGATACCCATTTAGACCCTCAAAAGCTATTTATCCGAACTTCTATTAAACTTCTGCGCACGTGGGTGCGCCTCTCGCATAGGCGATTGGGCATTAAAAACTCTTCAAACTTTTGCAGATTCACATCCAAAAACAATGCTATTTATCGAAAACATTTTATGAAACCATCCCTCAAAAGCTACCTTCATCTTCTCCATCCTCTTCATCTCTTCAAACTTTTGCAGATTCATATCCATCAAACCACACATTCACAACCTAATAAGTCTTCAATGCAAAGCTTTCATTTCTTTAGTTAAAAGTGCAAAAAAGTATCAACAAACCACAAAAACAGAGCTTGAACAACAACAAGAAACTCCAATTCAATTTCCCTTTCTTCCACGACAACTTCTTTTGTAATCTTATGTTCAAACAAAATCCAAGTTACGACAAGGAATAACTTTCCCATCACTTCTCTTCCTCCGTTTCCCTATATCATCCTCTCTTTCTTCCTTTCTCAATACATGTCCATTAAACCTTCAATTCTTAGAGTATGTCCATCCCCCAGCCTCAAAACCCCCGATCTCGAATCGTCGTCAATGGCGGCTTCACCAGGACCACCAATATGCATTACTACTGGTGCCGAATTTGTCGAAGAATCATCAGAATTAGCTTAGGAAACCCTTTAGAAATTTCCATTACTTGCCCCTTTTGCTCCAGAAATCTCCGCCATGAATTGGACGTAGCTAGGGCTCGAAATTTCCCTCGTCTCCCCCCGATTTCCCCTCCGATTGTCCAACGGTGGGGATTCGAAGATACCGATGAGTCATGGATCACGCTCCAATTCCCGAGACCAGCGGTAAATTCCGGGATAGAGGAGATTCCAAGGGTGAGAATTACGGGAAAGCATTTGGAGAAGGATTCGAACTGTGCGATTTGTAAGGAGGAATTTGAAATGGGAGAGGAAGTTAGGGAGTTGCCTTGCAAGCATTTTTACCATTCGGATTGCGTTGTTCCTTGGTTGAGAATGCATAATACTTGCCCTGTTTGCCGGTATACGTTGGAGAATATCGGCGACGAGGGGAGTGGGAGCGGTTTTAATGGCGGAAGGGGTGAGGAACTCGGGGAAGAAGAAGAAGAAGAAGAAGAAGGCGAAGGCGAAGGAAGAGGGAATGGATGGTGGAACTTGGTGTGTTGTTGGTGGCCGCTCCGTTTAATAGGCGATTGGGCTCGCCGTCTCCGGTTTGCTGATTCGGGTGATAGTTTCTTCGTCGTTGAACGTAAGGTTTTTTCTTTTCAAGTTTCTTCATCTTCATCTATGGATGGAGTTGGGAATCAAAATAAAAATAACAAACCATTTCTTATAATCAAAATGAAATTGTTTAGATTATTACCATTTTTCTTTTACCAAATATTTATTTCATTTTTTCAAATTTTAAAAATTTGCCTAAATTTAAATTTAGAAAATTATAAAAAAAAATAGAACCTTTAAAATGGAAAACACAGATAAAACATTTCATGTCGTAAACATCTTATAAAATATGAGAAATCAAGTAAAACAAATTGTTTGTCAAATTTTTCTATCTTTTAGAAAATATCTTTAAATTTTATATTTAATTTTGTAATTTTAGATCAGATACGTATATTTAA TGGGTCGGATACCCATTTAGACCCTCAAAAGCTATTTATCCGAACTTCTATTAAACTTCTGCGCACGTGGGTGCGCCTCTCGCATAGGCGATTGGGCATTAAAAACTCTTCAAACTTTTGCAGATTCACATCCAAAAACAATGCTATTTATCGAAAACATTTTATGAAACCATCCCTCAAAAGCTACCTTCATCTTCTCCATCCTCTTCATCTCTTCAAACTTTTGCAGATTCATATCCATCAAACCACACATTCACAACCTAATAAGTCTTCAATGCAAAGCTTTCATTTCTTTAGTTAAAAGTGCAAAAAAGTATCAACAAACCACAAAAACAGAGCTTGAACAACAACAAGAAACTCCAATTCAATTTCCCTTTCTTCCACGACAACTTCTTTTGTAATCTTATGTTCAAACAAAATCCAAGTTACGACAAGGAATAACTTTCCCATCACTTCTCTTCCTCCGTTTCCCTATATCATCCTCTCTTTCTTCCTTTCTCAATACATGTCCATTAAACCTTCAATTCTTAGAGTATGTCCATCCCCCAGCCTCAAAACCCCCGATCTCGAATCGTCGTCAATGGCGGCTTCACCAGGACCACCAATATGCATTACTACTGGTGCCGAATTTGTCGAAGAATCATCAGAATTAGCTTAGGAAACCCTTTAGAAATTTCCATTACTTGCCCCTTTTGCTCCAGAAATCTCCGCCATGAATTGGACGTAGCTAGGGCTCGAAATTTCCCTCGTCTCCCCCCGATTTCCCCTCCGATTGTCCAACGGTGGGGATTCGAAGATACCGATGAGTCATGGATCACGCTCCAATTCCCGAGACCAGCGGTAAATTCCGGGATAGAGGAGATTCCAAGGGTGAGAATTACGGGAAAGCATTTGGAGAAGGATTCGAACTGTGCGATTTGTAAGGAGGAATTTGAAATGGGAGAGGAAGTTAGGGAGTTGCCTTGCAAGCATTTTTACCATTCGGATTGCGTTGTTCCTTGGTTGAGAATGCATAATACTTGCCCTGTTTGCCGGTATACGTTGGAGAATATCGGCGACGAGGGGAGTGGGAGCGGTTTTAATGGCGGAAGGGGTGAGGAACTCGGGGAAGAAGAAGAAGAAGAAGAAGAAGGCGAAGGCGAAGGAAGAGGGAATGGATGGTGGAACTTGGTGTGTTGTTGGTGGCCGCTCCGTTTAATAGGCGATTGGGCTCGCCGTCTCCGGTTTGCTGATTCGGGTGATAGTTTCTTCGTCGTTGAACATACGTATATTTAA ATGTCCATCCCCCAGCCTCAAAACCCCCGATCTCGAATCGTCGTCAATGGCGGCTTCACCAGGACCACCAATATGCATTACTACTGGTGCCGAATTTGTCGAAGAATCATCAGAATTAGCTTAGGAAACCCTTTAGAAATTTCCATTACTTGCCCCTTTTGCTCCAGAAATCTCCGCCATGAATTGGACGTAGCTAGGGCTCGAAATTTCCCTCGTCTCCCCCCGATTTCCCCTCCGATTGTCCAACGGTGGGGATTCGAAGATACCGATGAGTCATGGATCACGCTCCAATTCCCGAGACCAGCGGTAAATTCCGGGATAGAGGAGATTCCAAGGGTGAGAATTACGGGAAAGCATTTGGAGAAGGATTCGAACTGTGCGATTTGTAAGGAGGAATTTGAAATGGGAGAGGAAGTTAGGGAGTTGCCTTGCAAGCATTTTTACCATTCGGATTGCGTTGTTCCTTGGTTGAGAATGCATAATACTTGCCCTGTTTGCCGGTATACGTTGGAGAATATCGGCGACGAGGGGAGTGGGAGCGGTTTTAATGGCGGAAGGGGTGAGGAACTCGGGGAAGAAGAAGAAGAAGAAGAAGAAGGCGAAGGCGAAGGAAGAGGGAATGGATGGTGGAACTTGGTGTGTTGTTGGTGGCCGCTCCGTTTAATAGGCGATTGGGCTCGCCGTCTCCGGTTTGCTGATTCGGGTGATAGTTTCTTCGTCGTTGAACATACGTATATTTAA MSIPQPQNPRSRIVVNGGFTRTTNMHYYWCRICRRIIRISLGNPLEISITCPFCSRNLRHELDVARARNFPRLPPISPPIVQRWGFEDTDESWITLQFPRPAVNSGIEEIPRVRITGKHLEKDSNCAICKEEFEMGEEVRELPCKHFYHSDCVVPWLRMHNTCPVCRYTLENIGDEGSGSGFNGGRGEELGEEEEEEEEGEGEGRGNGWWNLVCCWWPLRLIGDWARRLRFADSGDSFFVVEHTYI
BLAST of MELO3C019481.2.1 vs. NCBI nr
Match: XP_008456082.1 (PREDICTED: uncharacterized protein LOC103496124 [Cucumis melo]) HSP 1 Score: 463.4 bits (1191), Expect = 4.9e-127 Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0
BLAST of MELO3C019481.2.1 vs. NCBI nr
Match: XP_011651263.1 (PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X2 [Cucumis sativus] >XP_011651264.1 PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X2 [Cucumis sativus] >XP_011651265.1 PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X2 [Cucumis sativus]) HSP 1 Score: 416.8 bits (1070), Expect = 5.2e-113 Identity = 211/246 (85.77%), Postives = 218/246 (88.62%), Query Frame = 0
BLAST of MELO3C019481.2.1 vs. NCBI nr
Match: XP_004149959.1 (PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X1 [Cucumis sativus] >XP_011651258.1 PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X1 [Cucumis sativus] >XP_011651259.1 PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X1 [Cucumis sativus] >XP_011651260.1 PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X1 [Cucumis sativus] >XP_011651261.1 PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X1 [Cucumis sativus] >XP_011651262.1 PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X1 [Cucumis sativus]) HSP 1 Score: 415.2 bits (1066), Expect = 1.5e-112 Identity = 211/242 (87.19%), Postives = 215/242 (88.84%), Query Frame = 0
BLAST of MELO3C019481.2.1 vs. NCBI nr
Match: KGN57566.1 (hypothetical protein Csa_3G214060 [Cucumis sativus]) HSP 1 Score: 415.2 bits (1066), Expect = 1.5e-112 Identity = 211/242 (87.19%), Postives = 215/242 (88.84%), Query Frame = 0
BLAST of MELO3C019481.2.1 vs. NCBI nr
Match: XP_011651266.1 (PREDICTED: E3 ubiquitin-protein ligase RNF126 isoform X3 [Cucumis sativus]) HSP 1 Score: 415.2 bits (1066), Expect = 1.5e-112 Identity = 211/242 (87.19%), Postives = 215/242 (88.84%), Query Frame = 0
BLAST of MELO3C019481.2.1 vs. TAIR10
Match: AT1G68180.1 (RING/U-box superfamily protein) HSP 1 Score: 143.7 bits (361), Expect = 1.5e-34 Identity = 92/248 (37.10%), Postives = 120/248 (48.39%), Query Frame = 0
BLAST of MELO3C019481.2.1 vs. TAIR10
Match: AT2G40830.2 (RING-H2 finger C1A) HSP 1 Score: 106.3 bits (264), Expect = 2.7e-23 Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of MELO3C019481.2.1 vs. TAIR10
Match: AT3G56580.2 (RING/U-box superfamily protein) HSP 1 Score: 105.5 bits (262), Expect = 4.7e-23 Identity = 42/81 (51.85%), Postives = 57/81 (70.37%), Query Frame = 0
BLAST of MELO3C019481.2.1 vs. TAIR10
Match: AT3G10815.1 (RING/U-box superfamily protein) HSP 1 Score: 101.3 bits (251), Expect = 8.8e-22 Identity = 55/170 (32.35%), Postives = 80/170 (47.06%), Query Frame = 0
BLAST of MELO3C019481.2.1 vs. TAIR10
Match: AT3G46620.1 (zinc finger (C3HC4-type RING finger) family protein) HSP 1 Score: 100.1 bits (248), Expect = 2.0e-21 Identity = 39/70 (55.71%), Postives = 51/70 (72.86%), Query Frame = 0
BLAST of MELO3C019481.2.1 vs. Swiss-Prot
Match: sp|O22197|RHC1A_ARATH (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 4.9e-22 Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of MELO3C019481.2.1 vs. Swiss-Prot
Match: sp|Q94AK4|RZF1_ARATH (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 8.4e-22 Identity = 42/81 (51.85%), Postives = 57/81 (70.37%), Query Frame = 0
BLAST of MELO3C019481.2.1 vs. Swiss-Prot
Match: sp|Q7T0Q3|R126A_XENLA (E3 ubiquitin-protein ligase RNF126-A OS=Xenopus laevis OX=8355 GN=rnf126-a PE=2 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 2.7e-20 Identity = 43/100 (43.00%), Postives = 63/100 (63.00%), Query Frame = 0
BLAST of MELO3C019481.2.1 vs. Swiss-Prot
Match: sp|Q9SNB6|RDUF1_ARATH (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 3.5e-20 Identity = 39/70 (55.71%), Postives = 51/70 (72.86%), Query Frame = 0
BLAST of MELO3C019481.2.1 vs. Swiss-Prot
Match: sp|Q6DIP3|RN126_XENTR (E3 ubiquitin-protein ligase RNF126 OS=Xenopus tropicalis OX=8364 GN=rnf126 PE=2 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 4.6e-20 Identity = 42/100 (42.00%), Postives = 62/100 (62.00%), Query Frame = 0
BLAST of MELO3C019481.2.1 vs. TrEMBL
Match: tr|A0A1S3C2I0|A0A1S3C2I0_CUCME (uncharacterized protein LOC103496124 OS=Cucumis melo OX=3656 GN=LOC103496124 PE=4 SV=1) HSP 1 Score: 463.4 bits (1191), Expect = 3.2e-127 Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0
BLAST of MELO3C019481.2.1 vs. TrEMBL
Match: tr|A0A0A0LC10|A0A0A0LC10_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G214060 PE=4 SV=1) HSP 1 Score: 415.2 bits (1066), Expect = 1.0e-112 Identity = 211/242 (87.19%), Postives = 215/242 (88.84%), Query Frame = 0
BLAST of MELO3C019481.2.1 vs. TrEMBL
Match: tr|V7BR96|V7BR96_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G213500g PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 2.8e-38 Identity = 86/223 (38.57%), Postives = 113/223 (50.67%), Query Frame = 0
BLAST of MELO3C019481.2.1 vs. TrEMBL
Match: tr|K7M9N3|K7M9N3_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100785893 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 8.1e-38 Identity = 97/299 (32.44%), Postives = 127/299 (42.47%), Query Frame = 0
BLAST of MELO3C019481.2.1 vs. TrEMBL
Match: tr|A0A151T7Z5|A0A151T7Z5_CAJCA (RING finger protein 115 family OS=Cajanus cajan OX=3821 GN=KK1_017722 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 8.1e-38 Identity = 97/297 (32.66%), Postives = 129/297 (43.43%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
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