MELO3C008502.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTCTTCTCCAATGGACTCCAATCCTCAAACCCTTCACAACATTATTCCACAGTTCGACTTTGAATGGCTACACGAAGATCTTTTCCCACTCCACAAGTAAGAACAAAAAAAAAAAAAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGAATTGGAGAAAACTTTAGATCGATCTCACAAATGGGGTTTTGCTAAATTTTGTTTTTTTTCTTTGTTTTCTTTCACAGTGAATTAGATGAGCTTCCACCTTTAGATAACGATGAGCTTTTGGATGTGAATTCACGTTCATTATTACCATTCCATTTGGACGATAATGATGTTTTGGAGTTTGACAGTGAATTTTTGTCGAGGGAGTTGGAGATGGTTGAAATCGAAAGAAATGGGTTTTCATCAACTTGGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGAAAAGAGGTTGAGATTAATGGGAAATAATAATGGGAATAAGAGGAGAAAAGGTAGTTTTGTGTTGGGATTGGAAGAGATTCGAAAGTACTTTCATATACCAATATCAAAAGCAGCAAAAGAGATGAATGTTGGGTTGACAGTGCTTAAAAGAAGATGTAGACAACTTAATATCATGAGATGGCCTCATAGAAAACATAAGAGCTTGAATTCTCTCATCCAAAATGTGAAGGTATGTGTATCATTTATAAGTTGCCATCCACGTTGGATGTTGTTGGATAAAAATTTGGTTCTCAGTTTTTGGAAAACCTATAAGTACTCACTGATCTACATCCGACTTTTTTGACTTACTATCTACTCTTTACTAATAATTTTTAAAATAAAAAATAGTTTTCGAATAAAACCTTTCCTTTCCATGAACTTTTATTATACATACTTAAGAAAAGTAGATGTAAATGTTGATGAATGTTATTTGTTTGGCAGGAAATGGGGTTAACAAATGAGGTAAAAGGGTTAGAGGAGCACAAGAGGCTACTGGAGGAAATGCCAAATATGGACCTCACCCACACAGTCAAAAGGCTAAGGCAAGCTTGCTTCAAAGCCAATTACAAGAAAAACAGAAGACTTAGGTCCAATAATATTGCTTCTCTTCATCACTAACCATTAATTA TCTCTTCTCCAATGGACTCCAATCCTCAAACCCTTCACAACATTATTCCACAGTTCGACTTTGAATGGCTACACGAAGATCTTTTCCCACTCCACAATGAATTAGATGAGCTTCCACCTTTAGATAACGATGAGCTTTTGGATGTGAATTCACGTTCATTATTACCATTCCATTTGGACGATAATGATGTTTTGGAGTTTGACAGTGAATTTTTGTCGAGGGAGTTGGAGATGGTTGAAATCGAAAGAAATGGGTTTTCATCAACTTGGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGAAAAGAGGTTGAGATTAATGGGAAATAATAATGGGAATAAGAGGAGAAAAGGTAGTTTTGTGTTGGGATTGGAAGAGATTCGAAAGTACTTTCATATACCAATATCAAAAGCAGCAAAAGAGATGAATGTTGGGTTGACAGTGCTTAAAAGAAGATGTAGACAACTTAATATCATGAGATGGCCTCATAGAAAACATAAGAGCTTGAATTCTCTCATCCAAAATGTGAAGGAAATGGGGTTAACAAATGAGGTAAAAGGGTTAGAGGAGCACAAGAGGCTACTGGAGGAAATGCCAAATATGGACCTCACCCACACAGTCAAAAGGCTAAGGCAAGCTTGCTTCAAAGCCAATTACAAGAAAAACAGAAGACTTAGGTCCAATAATATTGCTTCTCTTCATCACTAACCATTAATTA ATGGACTCCAATCCTCAAACCCTTCACAACATTATTCCACAGTTCGACTTTGAATGGCTACACGAAGATCTTTTCCCACTCCACAATGAATTAGATGAGCTTCCACCTTTAGATAACGATGAGCTTTTGGATGTGAATTCACGTTCATTATTACCATTCCATTTGGACGATAATGATGTTTTGGAGTTTGACAGTGAATTTTTGTCGAGGGAGTTGGAGATGGTTGAAATCGAAAGAAATGGGTTTTCATCAACTTGGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGAAAAGAGGTTGAGATTAATGGGAAATAATAATGGGAATAAGAGGAGAAAAGGTAGTTTTGTGTTGGGATTGGAAGAGATTCGAAAGTACTTTCATATACCAATATCAAAAGCAGCAAAAGAGATGAATGTTGGGTTGACAGTGCTTAAAAGAAGATGTAGACAACTTAATATCATGAGATGGCCTCATAGAAAACATAAGAGCTTGAATTCTCTCATCCAAAATGTGAAGGAAATGGGGTTAACAAATGAGGTAAAAGGGTTAGAGGAGCACAAGAGGCTACTGGAGGAAATGCCAAATATGGACCTCACCCACACAGTCAAAAGGCTAAGGCAAGCTTGCTTCAAAGCCAATTACAAGAAAAACAGAAGACTTAGGTCCAATAATATTGCTTCTCTTCATCACTAA MDSNPQTLHNIIPQFDFEWLHEDLFPLHNELDELPPLDNDELLDVNSRSLLPFHLDDNDVLEFDSEFLSRELEMVEIERNGFSSTWKEEEEEEEEEEGEKRLRLMGNNNGNKRRKGSFVLGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHRKHKSLNSLIQNVKEMGLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRRLRSNNIASLHH
BLAST of MELO3C008502.2.1 vs. NCBI nr
Match: XP_008466842.1 (PREDICTED: protein RKD4 [Cucumis melo] >ADN33747.1 transcription factor [Cucumis melo subsp. melo]) HSP 1 Score: 402.9 bits (1034), Expect = 7.4e-109 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0
BLAST of MELO3C008502.2.1 vs. NCBI nr
Match: KGN57660.1 (hypothetical protein Csa_3G239240 [Cucumis sativus]) HSP 1 Score: 298.5 bits (763), Expect = 2.0e-77 Identity = 203/287 (70.73%), Postives = 211/287 (73.52%), Query Frame = 0
BLAST of MELO3C008502.2.1 vs. NCBI nr
Match: XP_022968161.1 (protein RKD4 [Cucurbita maxima]) HSP 1 Score: 206.5 bits (524), Expect = 1.0e-49 Identity = 126/246 (51.22%), Postives = 147/246 (59.76%), Query Frame = 0
BLAST of MELO3C008502.2.1 vs. NCBI nr
Match: XP_022945007.1 (protein RKD2 [Cucurbita moschata]) HSP 1 Score: 195.3 bits (495), Expect = 2.3e-46 Identity = 121/246 (49.19%), Postives = 147/246 (59.76%), Query Frame = 0
BLAST of MELO3C008502.2.1 vs. NCBI nr
Match: XP_022141143.1 (protein RKD4 [Momordica charantia]) HSP 1 Score: 188.0 bits (476), Expect = 3.7e-44 Identity = 125/258 (48.45%), Postives = 149/258 (57.75%), Query Frame = 0
BLAST of MELO3C008502.2.1 vs. TAIR10
Match: AT5G53040.1 (RWP-RK domain-containing protein) HSP 1 Score: 134.4 bits (337), Expect = 8.9e-32 Identity = 64/104 (61.54%), Postives = 84/104 (80.77%), Query Frame = 0
BLAST of MELO3C008502.2.1 vs. TAIR10
Match: AT5G66990.1 (RWP-RK domain-containing protein) HSP 1 Score: 111.7 bits (278), Expect = 6.2e-25 Identity = 55/116 (47.41%), Postives = 83/116 (71.55%), Query Frame = 0
BLAST of MELO3C008502.2.1 vs. TAIR10
Match: AT1G74480.1 (RWP-RK domain-containing protein) HSP 1 Score: 110.5 bits (275), Expect = 1.4e-24 Identity = 59/119 (49.58%), Postives = 83/119 (69.75%), Query Frame = 0
BLAST of MELO3C008502.2.1 vs. TAIR10
Match: AT1G18790.1 (RWP-RK domain-containing protein) HSP 1 Score: 97.4 bits (241), Expect = 1.2e-20 Identity = 54/119 (45.38%), Postives = 73/119 (61.34%), Query Frame = 0
BLAST of MELO3C008502.2.1 vs. TAIR10
Match: AT4G35590.1 (RWP-RK domain-containing protein) HSP 1 Score: 78.6 bits (192), Expect = 5.8e-15 Identity = 43/115 (37.39%), Postives = 67/115 (58.26%), Query Frame = 0
BLAST of MELO3C008502.2.1 vs. Swiss-Prot
Match: sp|Q9LVU8|RKD4_ARATH (Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 1.6e-30 Identity = 64/104 (61.54%), Postives = 84/104 (80.77%), Query Frame = 0
BLAST of MELO3C008502.2.1 vs. Swiss-Prot
Match: sp|Q9FGD1|RKD3_ARATH (Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.1e-23 Identity = 55/116 (47.41%), Postives = 83/116 (71.55%), Query Frame = 0
BLAST of MELO3C008502.2.1 vs. Swiss-Prot
Match: sp|Q9CA66|RKD2_ARATH (Protein RKD2 OS=Arabidopsis thaliana OX=3702 GN=RKD2 PE=2 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.5e-23 Identity = 59/119 (49.58%), Postives = 83/119 (69.75%), Query Frame = 0
BLAST of MELO3C008502.2.1 vs. Swiss-Prot
Match: sp|Q9M9U9|RKD1_ARATH (Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 2.2e-19 Identity = 54/119 (45.38%), Postives = 73/119 (61.34%), Query Frame = 0
BLAST of MELO3C008502.2.1 vs. Swiss-Prot
Match: sp|O81791|RKD5_ARATH (Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.0e-13 Identity = 43/115 (37.39%), Postives = 67/115 (58.26%), Query Frame = 0
BLAST of MELO3C008502.2.1 vs. TrEMBL
Match: tr|A0A1S3CS47|A0A1S3CS47_CUCME (protein RKD4 OS=Cucumis melo OX=3656 GN=LOC103504148 PE=4 SV=1) HSP 1 Score: 402.9 bits (1034), Expect = 4.9e-109 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0
BLAST of MELO3C008502.2.1 vs. TrEMBL
Match: tr|E5GBA6|E5GBA6_CUCME (Transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 402.9 bits (1034), Expect = 4.9e-109 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0
BLAST of MELO3C008502.2.1 vs. TrEMBL
Match: tr|A0A0A0L6Q6|A0A0A0L6Q6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G239240 PE=4 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 1.3e-77 Identity = 203/287 (70.73%), Postives = 211/287 (73.52%), Query Frame = 0
BLAST of MELO3C008502.2.1 vs. TrEMBL
Match: tr|A0A061G154|A0A061G154_THECC (RWP-RK domain-containing protein, putative OS=Theobroma cacao OX=3641 GN=TCM_015430 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 4.2e-36 Identity = 78/104 (75.00%), Postives = 91/104 (87.50%), Query Frame = 0
BLAST of MELO3C008502.2.1 vs. TrEMBL
Match: tr|A0A067JSK1|A0A067JSK1_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_23923 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 1.2e-35 Identity = 79/111 (71.17%), Postives = 92/111 (82.88%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
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