MELO3C014729.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTGCAAGGTCAACTTGCATAAATTTTGTTTAGTGGAACAATCATTGGAATAGAAAATGTGAAACACCAATTTTAGAAAAAAGAAATTTTGGAAGCAGCTGAAAGATGACAATAACTATTCAGCATCCACTTGTGACTGATGTTCTAAAACTAAAATATTAGGAAGGTATAAGGAAAAGGACAGAAAAGAAGGAACCCTAATTCATCTGCTTCTTCTCCGTCTCACGTTCAACCGCCCAGCCCCTTCCTTGCCTCTCCGGTAGTATCTCGATGACAGTCCTTTGAGATTAGCGGCGGATCGTACTCTCACTCACTCAGTTTCTGGAAGTGATTTGCTGATTAAACGGAGCAATATGTGTATTATTTGCGGAATCATCTTCTGAATTCTTCCTAGGGATAAGGTTGAAGATGGACATAATTTCCCAATTGCAGGAACAAGTTAACACAATTGCTGCTTTAGCTTTCAACACATTTGGGACATTGCAGAGAGACGCTCCTCCAGTTCGTTTATCCCCTAATTACCCCGAACCACCGTCTCAGGAGCCTACAGAGGATAGTGCAACCATCGCAGAGCAGCCCAAGCTTATGAGTGCCGCTTTGGTGAAAGCTGCCAAGCAGGTGCGAATCGTTTATTCTTTACCTTAATACTTCGGGGTGGAAAATATGAATGTGTGATGCATGTTGATGTACCTCTTGTTAATAACTTTTTCACGCATTGAAACCTCAAGAAACATATTTGCATTTTCCATTTGGGGAAATTCAGTATCCTAGATTAACCTTACATGCATTCTCTCTACTGGGTAAGTAGCCGAGAATGCAGTATCTACTTGAATCACCCTTGTGCTGAGGTTGGAAGAGAGAAAAAAAATCAAGGCAGCAGATTTCCTGCTACTTGTTTGAGATGAGTACATATTCTAATGCTATGATATATGATACAATCCACAAATTTGGTATCAAAAACTTCAGTCTATTTTTGCCATCCAACATCAAATACTACTTAGGTAGGTATGGCTACTCGGTCGGCAATAAAACAAACTACTATGGTTCTTTTTCTTAGTTATCCTTTTCTTTTTAATTGCTTGTTATGTACATTTGGGCCCACTTTAAGGTGTTCTTTAAGTGTTGATATTTTGGAATCTGATACCCAAACCCTGTATTTGAGCAATTTTGCTGAGCGAGTTTTGATTTTCACAAGTTTTCATCGTCGAACTTAGCAATGCATTAAGGTTTGTTCTTTTCAATAATTAGCAATGCATTAAGGTTTGTTCTTTCCAATAATCTTTCAAGGATTATATAGAGTTTATAAAATGCACTGATTCTGTCCACGTTAAGTTTGAAAATCCCAGTGCGATAGTATTAAGTAATAGGAACATACAAATTTTTCCAATTCTGTTGGACTTTTAATGTCTTCTAGATGTGATTCTACAACGAGTTAGATTTGTTCTATACATTCTCTCATTTTCTGTCTTTTTTACGTTTACCTCTTGATTGGTATGTTATTTTATTAGCTTTTTAAGGAGTTGCAAGGAGTCAACTGAGGAATTCTCCTCCCTCCACTTTTTTCTTTGGGAGAAAAGGTTGTTTTCGTAGTAGGTTGAAGTATGTGCTACTTTGTGGGGTTTGGGGTGCGAGAAATGATTGGATCTTCGAGGGAGAAATAATCGAATCTTGGATCTTGAAGATTCATTTTTCAGAATTAATCGCTGAGTCATATTTCACTTGATTGGAGCCCTTCCCCTTCTTATAGTTAGCTACACTTTTTGTGAACACCATTCTGTATGTTCATGTATTATTTCACCTTGTTTTTCAACAAAAGTCTAGTTGTACGTCAATAACAAAATTTATCAGCATTTTGAACGAAAGAAAGGGATGGGATCTTGCTTCATTTATTTGCAATTATTCAATTGAACGTGTGTACTTCTTAAAAGAAATTATTGTCAATATTTTCTAGCACAGTTTGATGCACTGGTTGCAGCATTGCCTCTATCTGATGGAGGTGAAGAAGAGCAATTGAAAAGGATTGCAGAACTACAGGTATGAATTCTCATATTCTGATGTTGATATAAGATCAAGAGTTGTGTTGTTTACTTCTCAGTATGTATTTCAGGCTGAGAACGATGTTGTAGGTCAAGAACTTCAAAAGCAGCTACAAGCAGCAGGTGTTACCTCCGTCTTCTTGTTAATCTTTATATTTTCAAGCAGCAGTTGACTGATGTTTGGCTGGCGACTTACATCAGTTGAAATAACTCTATTTAATAATTTTAGCCCTAAATGTAAATTTCTCATGTTCACTTCATTCTATTGAACATACGGATATTTTGCCCCATCTACACAACTAACAATCTTTACCGAAACTGTGTTGCAGAGCAAGAATTAGTACAAGTTCAGGAGCTGTTCAGCCAAGTAGCAGATAATTGCTTGAACTTAAAGAAAGCAGATTGAAAGAGTGGGGGAACTTTCCTATGCTACCAATGTATGGAAACTTTCCGCCTTCATTTCTGCCACATGACTCTTTGTTTTTATATTACATATATGTAGAAATATACGTGATTCTACAGTTTATGGAAGAAAAATAATTTTGTCCATTGTATTAATTTTTTTACTGACATTGATATTTTCATCGATATTTCTAAGTTTTCAAATGACTTTGATATCATCACGAGGAGCGAATGGATATTTTCATTATATTGTAAACAACTAGGAAAAAAAGGCTAAATTATAAAAAATGTTCCTTTAC GTTTGCAAGGTCAACTTGCATAAATTTTGTTTAGTGGAACAATCATTGGAATAGAAAATGTGAAACACCAATTTTAGAAAAAAGAAATTTTGGAAGCAGCTGAAAGATGACAATAACTATTCAGCATCCACTTGTGACTGATGTTCTAAAACTAAAATATTAGGAAGGTATAAGGAAAAGGACAGAAAAGAAGGAACCCTAATTCATCTGCTTCTTCTCCGTCTCACGTTCAACCGCCCAGCCCCTTCCTTGCCTCTCCGGTAGTATCTCGATGACAGTCCTTTGAGATTAGCGGCGGATCGTACTCTCACTCACTCAGTTTCTGGAAGTGATTTGCTGATTAAACGGAGCAATATGTGTATTATTTGCGGAATCATCTTCTGAATTCTTCCTAGGGATAAGGTTGAAGATGGACATAATTTCCCAATTGCAGGAACAAGTTAACACAATTGCTGCTTTAGCTTTCAACACATTTGGGACATTGCAGAGAGACGCTCCTCCAGTTCGTTTATCCCCTAATTACCCCGAACCACCGTCTCAGGAGCCTACAGAGGATAGTGCAACCATCGCAGAGCAGCCCAAGCTTATGAGTGCCGCTTTGGTGAAAGCTGCCAAGCAGTTTGATGCACTGGTTGCAGCATTGCCTCTATCTGATGGAGGTGAAGAAGAGCAATTGAAAAGGATTGCAGAACTACAGGCTGAGAACGATGTTGTAGGTCAAGAACTTCAAAAGCAGCTACAAGCAGCAGAGCAAGAATTAGTACAAGTTCAGGAGCTGTTCAGCCAAGTAGCAGATAATTGCTTGAACTTAAAGAAAGCAGATTGAAAGAGTGGGGGAACTTTCCTATGCTACCAATGTATGGAAACTTTCCGCCTTCATTTCTGCCACATGACTCTTTGTTTTTATATTACATATATGTAGAAATATACGTGATTCTACAGTTTATGGAAGAAAAATAATTTTGTCCATTGTATTAATTTTTTTACTGACATTGATATTTTCATCGATATTTCTAAGTTTTCAAATGACTTTGATATCATCACGAGGAGCGAATGGATATTTTCATTATATTGTAAACAACTAGGAAAAAAAGGCTAAATTATAAAAAATGTTCCTTTAC ATGGACATAATTTCCCAATTGCAGGAACAAGTTAACACAATTGCTGCTTTAGCTTTCAACACATTTGGGACATTGCAGAGAGACGCTCCTCCAGTTCGTTTATCCCCTAATTACCCCGAACCACCGTCTCAGGAGCCTACAGAGGATAGTGCAACCATCGCAGAGCAGCCCAAGCTTATGAGTGCCGCTTTGGTGAAAGCTGCCAAGCAGTTTGATGCACTGGTTGCAGCATTGCCTCTATCTGATGGAGGTGAAGAAGAGCAATTGAAAAGGATTGCAGAACTACAGGCTGAGAACGATGTTGTAGGTCAAGAACTTCAAAAGCAGCTACAAGCAGCAGAGCAAGAATTAGTACAAGTTCAGGAGCTGTTCAGCCAAGTAGCAGATAATTGCTTGAACTTAAAGAAAGCAGATTGA MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPSQEPTEDSATIAEQPKLMSAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAENDVVGQELQKQLQAAEQELVQVQELFSQVADNCLNLKKAD
BLAST of MELO3C014729.2.1 vs. NCBI nr
Match: XP_008449895.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 21 [Cucumis melo]) HSP 1 Score: 254.6 bits (649), Expect = 1.9e-64 Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0
BLAST of MELO3C014729.2.1 vs. NCBI nr
Match: XP_004149640.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 21 [Cucumis sativus] >KGN54019.1 hypothetical protein Csa_4G268030 [Cucumis sativus]) HSP 1 Score: 251.9 bits (642), Expect = 1.2e-63 Identity = 136/138 (98.55%), Postives = 138/138 (100.00%), Query Frame = 0
BLAST of MELO3C014729.2.1 vs. NCBI nr
Match: XP_022153730.1 (mediator of RNA polymerase II transcription subunit 21 [Momordica charantia]) HSP 1 Score: 241.5 bits (615), Expect = 1.7e-60 Identity = 131/138 (94.93%), Postives = 133/138 (96.38%), Query Frame = 0
BLAST of MELO3C014729.2.1 vs. NCBI nr
Match: XP_022958635.1 (mediator of RNA polymerase II transcription subunit 21 [Cucurbita moschata] >XP_022958636.1 mediator of RNA polymerase II transcription subunit 21 [Cucurbita moschata] >XP_022996209.1 mediator of RNA polymerase II transcription subunit 21 [Cucurbita maxima] >XP_022996211.1 mediator of RNA polymerase II transcription subunit 21 [Cucurbita maxima]) HSP 1 Score: 239.2 bits (609), Expect = 8.4e-60 Identity = 129/138 (93.48%), Postives = 131/138 (94.93%), Query Frame = 0
BLAST of MELO3C014729.2.1 vs. NCBI nr
Match: XP_023532119.1 (mediator of RNA polymerase II transcription subunit 21 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 236.5 bits (602), Expect = 5.4e-59 Identity = 127/138 (92.03%), Postives = 130/138 (94.20%), Query Frame = 0
BLAST of MELO3C014729.2.1 vs. TAIR10
Match: AT4G04780.1 (mediator 21) HSP 1 Score: 199.5 bits (506), Expect = 1.3e-51 Identity = 109/139 (78.42%), Postives = 119/139 (85.61%), Query Frame = 0
BLAST of MELO3C014729.2.1 vs. Swiss-Prot
Match: sp|C0LU16|MED21_ARATH (Mediator of RNA polymerase II transcription subunit 21 OS=Arabidopsis thaliana OX=3702 GN=MED21 PE=1 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 2.4e-50 Identity = 109/139 (78.42%), Postives = 119/139 (85.61%), Query Frame = 0
BLAST of MELO3C014729.2.1 vs. TrEMBL
Match: tr|A0A1S3BN38|A0A1S3BN38_CUCME (mediator of RNA polymerase II transcription subunit 21 OS=Cucumis melo OX=3656 GN=LOC103491637 PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 1.3e-64 Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0
BLAST of MELO3C014729.2.1 vs. TrEMBL
Match: tr|A0A0A0KZ00|A0A0A0KZ00_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G268030 PE=4 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 8.2e-64 Identity = 136/138 (98.55%), Postives = 138/138 (100.00%), Query Frame = 0
BLAST of MELO3C014729.2.1 vs. TrEMBL
Match: tr|A0A1S4BT41|A0A1S4BT41_TOBAC (mediator of RNA polymerase II transcription subunit 21-like isoform X1 OS=Nicotiana tabacum OX=4097 GN=LOC107811605 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 1.4e-55 Identity = 120/138 (86.96%), Postives = 126/138 (91.30%), Query Frame = 0
BLAST of MELO3C014729.2.1 vs. TrEMBL
Match: tr|A0A1J6IVT0|A0A1J6IVT0_NICAT (Mediator of rna polymerase ii transcription subunit 21 OS=Nicotiana attenuata OX=49451 GN=MED21 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 1.4e-55 Identity = 120/138 (86.96%), Postives = 126/138 (91.30%), Query Frame = 0
BLAST of MELO3C014729.2.1 vs. TrEMBL
Match: tr|A0A1U7VUH3|A0A1U7VUH3_NICSY (mediator of RNA polymerase II transcription subunit 21-like isoform X1 OS=Nicotiana sylvestris OX=4096 GN=LOC104220774 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 1.4e-55 Identity = 120/138 (86.96%), Postives = 126/138 (91.30%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
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