MELO3C029638.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCATGAACAACAATGTAAACAAGGACAACCACATAGTTGACCTATGGAACAAGATTGCAAACTACTCAAAATTTATTCTTTAGTGGAATGCATTTCAGCGACATCTCTTTGCCATTTCGTTTACCCATTCCCTAAAGACTTCAAATCTTCAAGTTTGAAGTGTTTTCAGACACCACACATCGAGGATTTTGAAGTTACTGGACAAATATAATACGTTATGACCCTTACAAACAGTCTTTAATGTGTTATAGATCAATTAATCCGTAACACTTTAAAGCTCTTGATGGTAGATTCTGAGTATTTTTTTGACCCATTTGAACACTTCTTCCATAAAGATTTTATGCTAGTGCGTGTCTTTTAGGTAGTTAATCTTAAATCATCGATTAATCTGAAAGCAAGCTTTTGAGTTTATTAGTAATTTATGAATTGAACTGTATTTATTTTTCAAACTCAGTCTCTTTATTTCTGCCTAAGTTGGGGCAAAAAAAGGAAAACCATTCATCATCTATGGATAACTTTCTTATTCATTTTGATCATCAAATTAACTCAAAAGTACAATTTTAGTCTATGAAATAGAAACACCCCACAAAGCACAAATACTCTTAACCAAAATCATATCGACGGAGGGAATGTCTTTGAGAAACTGGGATGAACAATCATGGAGTTCAGAAATGGCTTGGCAACAAGAAGGATGAGGAGCAACTGCATTTTTAAGCACATCAATCACACATTCTGTGGCCTTGGGAACAAATGATTTGCAGGGAAACAAAGAGATATCCCCTTTAGGAGCTGCTGCTGCCACCGTTACCGGGCGAGCCATTACCGATGATGCTAAAATGAAAATGCAGAAAAGGAGTGCAAGTGGTAACTTGGTGAATGATGCTGCCATTATTCTTAGAAAAACTGAGTACGAAGGTCTGTTGAAGGATAAAGGAATAGCTCTATTTTGTTTGTGGGAAAAAACGAGATAGTAGAGGTTAGATATATATAGATGGTCACACATGAAGATTGGAAACGTCTGGCAGCCATTGAAAACTGCAATTCTTTTAATATTAACTTTGAACTTTGGAGTTACTAAATTTGGGTTTAACGTGGAATGAGAATAGAAGATCATAATGCATTGTTGTAAGTTTTTTTAGTCTTATTACTTGTTATTATTATTAATATTTGGTTAACTTGTCCCAACATTGAACAACTCAATTAGTTTCTACATATAAATCCTTGATTAAAATGTCTTACACTATGATATATACCATGTGTTTTTATGTCAACATCAAAGGATTCGGGGCACAATGGTGGTGCCTATCTAACATCCTAATTTCATATTAGAAAATTATATGTATTTTGGATCCAGACGTGTTAGGTTCATTAAAAAACAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACGATATACTAAAAGAACATTTATTCTTCATTTATATTGCATTAATGTTAAGGGTCTGCTAATATATATATATATATATATATATATTGACTAAAAAGAATTAGTTGTTAAAAATAAAATTTAAAAAATGCAGTGAATTGAATATTGAGCCCTTTCGTAAATGTTCACCTAGGGAAAATATCATTTGACAAGTCTCGGACATACAAAATATAAACCATCCAGTTTAATTATTTGTAAAATAATTACATACGCCAGCCTGTTAGAGGTGGGAGGTCCAAATTTTTGATCCTTGACTCGAAAAACTTTAATTATTTTAGTTTTTTTTTAAGGGAAAACTACTGCAAAACTGTACTTACATGATTCAAAAACAATGTCCTTTCTTTTCGTGATTTTTCTTTTTGGTCATTTAACTCCTTGGGTTACTATAGTTTTACTATTTTATTCTAAGATTTTTGCTATGTGTAAGTGATTTAGGCGTTTTTCAATTAGTCCTAAGCCGTCGTAGAGATCAACTTTCTATTGAGAATTAAGTTTTTATGTCGTGGAGTTTCCGCAGAAACCAATAAGGATTTTTTTATTTGCTTATAGTTCTTGCATTGAATATGGTGTGGTTGTCTCATAGAAAAAAATCAATAAAAAAAAGATTGATGTCTTATGCCCCTAAGTTTTTGATTATTTTTTTGTTCTTGTTGTTGCTATTTTAATGTTGGTTTTTGTTCTTGTTAGGAGTATCGGTTTTGGTTTTTTATCTGAACTTAAGTAAATTGGATTTGGTTATTAAGTTTCTGGTTTTTTACTATAATTTTATGCTCTATTCATTTAAGTTTCTTATGAATCTTAGTCCCCCTAATGTTTTTAATACTTTTTTGTTCTTGTTGTTGCTCTTTTAATATTCCGCTTATGGCTTCTGGTTCCTTATCCGAACTTAAGTAATTTGGATTTGGTTTATATATAGCACTTCTAATAAACACTATAAAAGTAGGAAAAAAAAAGCAGAAAAGAAAAAACGTAAAAGTGGGAAAAGATTATTTAAGTTTTGGTGCGATATTTGGATTTGATAAATCTGATAGGTATTTTGATTTTGACTTTAGTTCATGTAGGAGTTATTTCAATAACCATGATGGTTGATCTTGCTATAAAATGTTTTTCCATGTTCTTTTTATGCAGGAGGCGGCTATTTAATATTATAAATGATTTGCCAACTGTATTTGAAGTGGTCACCAATATTGCAAAGAAACAAGTTAAGGAAAAATCATCAACTGCAAATGGTAGCAAATCCAAGTCAAGTTTTAAATCGGTATGTGTAtNATTTGAAGTGGTCACCAATATTGCAAAGAAACAAGTTAAGGAAAAATCATCAAGTGCAAATGGTAGCAAATCTAAGTCAAGTTTTAAATTTGTATGTGTATCGTGATCTTCATTTTTTCAGTTGGTTAACTAATTTTACTTGTGGTACTCTATTTTTGAATGTAACTCTTTTTTTATTTGATACCATTTGAGCTATTCTCTGTTTGGTGTCCTCTCTTGGATAGTCTCTAATTTTTCAGTTGGTTAACGATGTGtTTTTTTTTTTTTTTtATTTATTTTATCTATTTTTCTAGAAATGA ATGGCCATGAACAACAATGGAAACAAAGAGATATCCCCTTTAGGAGCTGCTGCTGCCACCGTTACCGGGCGAGCCATTACCGATGATGCTAAAATGAAAATGCAGAAAAGGAGTGCAAGTGGTAACTTGGTGAATGATGCTGCCATTATTCTTAGAAAAACTGAGTACGAAGGGAAAACTACTGCAAAACTGAGGCGGCTATTTAATATTATAAATGATTTGCCAACTGTATTTGAAGTGGTCACCAATATTGCAAAGAAACAAGTTAAGGAAAAATCATCAACTGCAAATGGTAGCAAATCCAAGTCAAGTTTTAAATCGAAATGA ATGGCCATGAACAACAATGGAAACAAAGAGATATCCCCTTTAGGAGCTGCTGCTGCCACCGTTACCGGGCGAGCCATTACCGATGATGCTAAAATGAAAATGCAGAAAAGGAGTGCAAGTGGTAACTTGGTGAATGATGCTGCCATTATTCTTAGAAAAACTGAGTACGAAGGGAAAACTACTGCAAAACTGAGGCGGCTATTTAATATTATAAATGATTTGCCAACTGTATTTGAAGTGGTCACCAATATTGCAAAGAAACAAGTTAAGGAAAAATCATCAACTGCAAATGGTAGCAAATCCAAGTCAAGTTTTAAATCGAAATGA MAMNNNGNKEISPLGAAAATVTGRAITDDAKMKMQKRSASGNLVNDAAIILRKTEYEGKTTAKLRRLFNIINDLPTVFEVVTNIAKKQVKEKSSTANGSKSKSSFKSK
BLAST of MELO3C029638.2 vs. NCBI nr
Match: XP_004141692.1 (PREDICTED: PHD finger protein ALFIN-LIKE 3-like isoform X1 [Cucumis sativus] >KGN45504.1 hypothetical protein Csa_7G450620 [Cucumis sativus]) HSP 1 Score: 75.5 bits (184), Expect = 1.3e-10 Identity = 41/44 (93.18%), Postives = 43/44 (97.73%), Query Frame = 0
BLAST of MELO3C029638.2 vs. NCBI nr
Match: XP_011659633.1 (PREDICTED: PHD finger protein ALFIN-LIKE 4-like isoform X2 [Cucumis sativus]) HSP 1 Score: 75.1 bits (183), Expect = 1.6e-10 Identity = 41/43 (95.35%), Postives = 42/43 (97.67%), Query Frame = 0
BLAST of MELO3C029638.2 vs. NCBI nr
Match: XP_008462330.1 (PREDICTED: PHD finger protein ALFIN-LIKE 3-like isoform X1 [Cucumis melo]) HSP 1 Score: 73.6 bits (179), Expect = 4.8e-10 Identity = 40/43 (93.02%), Postives = 42/43 (97.67%), Query Frame = 0
BLAST of MELO3C029638.2 vs. NCBI nr
Match: XP_022992372.1 (PHD finger protein ALFIN-LIKE 3-like [Cucurbita maxima]) HSP 1 Score: 70.5 bits (171), Expect = 4.0e-09 Identity = 39/51 (76.47%), Postives = 44/51 (86.27%), Query Frame = 0
BLAST of MELO3C029638.2 vs. NCBI nr
Match: XP_022953587.1 (PHD finger protein ALFIN-LIKE 3-like [Cucurbita moschata]) HSP 1 Score: 69.3 bits (168), Expect = 9.0e-09 Identity = 38/51 (74.51%), Postives = 44/51 (86.27%), Query Frame = 0
BLAST of MELO3C029638.2 vs. TAIR10
Match: AT5G26210.1 (alfin-like 4) HSP 1 Score: 45.4 bits (106), Expect = 2.5e-05 Identity = 22/36 (61.11%), Postives = 27/36 (75.00%), Query Frame = 0
BLAST of MELO3C029638.2 vs. TAIR10
Match: AT5G20510.1 (alfin-like 5) HSP 1 Score: 41.2 bits (95), Expect = 4.7e-04 Identity = 21/39 (53.85%), Postives = 29/39 (74.36%), Query Frame = 0
BLAST of MELO3C029638.2 vs. Swiss-Prot
Match: sp|A2Y4R8|ALFL5_ORYSI (PHD finger protein ALFIN-LIKE 5 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19996 PE=3 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.2e-04 Identity = 22/28 (78.57%), Postives = 25/28 (89.29%), Query Frame = 0
BLAST of MELO3C029638.2 vs. Swiss-Prot
Match: sp|Q60DW3|ALFL5_ORYSJ (PHD finger protein ALFIN-LIKE 5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0419100 PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.2e-04 Identity = 22/28 (78.57%), Postives = 25/28 (89.29%), Query Frame = 0
BLAST of MELO3C029638.2 vs. Swiss-Prot
Match: sp|O81488|ALFL4_ARATH (PHD finger protein ALFIN-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=AL4 PE=1 SV=2) HSP 1 Score: 45.4 bits (106), Expect = 4.5e-04 Identity = 22/36 (61.11%), Postives = 27/36 (75.00%), Query Frame = 0
BLAST of MELO3C029638.2 vs. Swiss-Prot
Match: sp|B8BJV8|ALFL8_ORYSI (PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_35671 PE=3 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 4.5e-04 Identity = 23/42 (54.76%), Postives = 32/42 (76.19%), Query Frame = 0
BLAST of MELO3C029638.2 vs. Swiss-Prot
Match: sp|Q2R837|ALFL8_ORYSJ (PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0244800 PE=2 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 4.5e-04 Identity = 23/42 (54.76%), Postives = 32/42 (76.19%), Query Frame = 0
BLAST of MELO3C029638.2 vs. TrEMBL
Match: tr|A0A0A0K9L1|A0A0A0K9L1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450620 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 8.3e-11 Identity = 41/44 (93.18%), Postives = 43/44 (97.73%), Query Frame = 0
BLAST of MELO3C029638.2 vs. TrEMBL
Match: tr|A0A1S3CI87|A0A1S3CI87_CUCME (PHD finger protein ALFIN-LIKE 3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500707 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 3.1e-10 Identity = 40/43 (93.02%), Postives = 42/43 (97.67%), Query Frame = 0
BLAST of MELO3C029638.2 vs. TrEMBL
Match: tr|A0A1S3CGR0|A0A1S3CGR0_CUCME (PHD finger protein ALFIN-LIKE 3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500707 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.2e-06 Identity = 31/34 (91.18%), Postives = 33/34 (97.06%), Query Frame = 0
BLAST of MELO3C029638.2 vs. TrEMBL
Match: tr|A0A1S4E514|A0A1S4E514_CUCME (PHD finger protein ALFIN-LIKE 3-like OS=Cucumis melo OX=3656 GN=LOC107992128 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 8.0e-06 Identity = 32/34 (94.12%), Postives = 34/34 (100.00%), Query Frame = 0
BLAST of MELO3C029638.2 vs. TrEMBL
Match: tr|F6H3R5|F6H3R5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_04s0008g01670 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.4e-05 Identity = 33/51 (64.71%), Postives = 38/51 (74.51%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |