MELO3C029638.2.1 (mRNA) Melon (DHL92) v3.6.1

Overview
NameMELO3C029638.2.1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionPHD finger alfin-like protein
Locationchr02 : 16249579 .. 16255058 (+)
Sequence length327
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCATGAACAACAATGTAAACAAGGACAACCACATAGTTGACCTATGGAACAAGATTGCAAACTACTCAAAATTTATTCTTTAGTGGAATGCATTTCAGCGACATCTCTTTGCCATTTCGTTTACCCATTCCCTAAAGACTTCAAATCTTCAAGTTTGAAGTGTTTTCAGACACCACACATCGAGGATTTTGAAGTTACTGGACAAATATAATACGTTATGACCCTTACAAACAGTCTTTAATGTGTTATAGATCAATTAATCCGTAACACTTTAAAGCTCTTGATGGTAGATTCTGAGTATTTTTTTGACCCATTTGAACACTTCTTCCATAAAGATTTTATGCTAGTGCGTGTCTTTTAGGTAGTTAATCTTAAATCATCGATTAATCTGAAAGCAAGCTTTTGAGTTTATTAGTAATTTATGAATTGAACTGTATTTATTTTTCAAACTCAGTCTCTTTATTTCTGCCTAAGTTGGGGCAAAAAAAGGAAAACCATTCATCATCTATGGATAACTTTCTTATTCATTTTGATCATCAAATTAACTCAAAAGTACAATTTTAGTCTATGAAATAGAAACACCCCACAAAGCACAAATACTCTTAACCAAAATCATATCGACGGAGGGAATGTCTTTGAGAAACTGGGATGAACAATCATGGAGTTCAGAAATGGCTTGGCAACAAGAAGGATGAGGAGCAACTGCATTTTTAAGCACATCAATCACACATTCTGTGGCCTTGGGAACAAATGATTTGCAGGGAAACAAAGAGATATCCCCTTTAGGAGCTGCTGCTGCCACCGTTACCGGGCGAGCCATTACCGATGATGCTAAAATGAAAATGCAGAAAAGGAGTGCAAGTGGTAACTTGGTGAATGATGCTGCCATTATTCTTAGAAAAACTGAGTACGAAGGTCTGTTGAAGGATAAAGGAATAGCTCTATTTTGTTTGTGGGAAAAAACGAGATAGTAGAGGTTAGATATATATAGATGGTCACACATGAAGATTGGAAACGTCTGGCAGCCATTGAAAACTGCAATTCTTTTAATATTAACTTTGAACTTTGGAGTTACTAAATTTGGGTTTAACGTGGAATGAGAATAGAAGATCATAATGCATTGTTGTAAGTTTTTTTAGTCTTATTACTTGTTATTATTATTAATATTTGGTTAACTTGTCCCAACATTGAACAACTCAATTAGTTTCTACATATAAATCCTTGATTAAAATGTCTTACACTATGATATATACCATGTGTTTTTATGTCAACATCAAAGGATTCGGGGCACAATGGTGGTGCCTATCTAACATCCTAATTTCATATTAGAAAATTATATGTATTTTGGATCCAGACGTGTTAGGTTCATTAAAAAACAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACGATATACTAAAAGAACATTTATTCTTCATTTATATTGCATTAATGTTAAGGGTCTGCTAATATATATATATATATATATATATATTGACTAAAAAGAATTAGTTGTTAAAAATAAAATTTAAAAAATGCAGTGAATTGAATATTGAGCCCTTTCGTAAATGTTCACCTAGGGAAAATATCATTTGACAAGTCTCGGACATACAAAATATAAACCATCCAGTTTAATTATTTGTAAAATAATTACATACGCCAGCCTGTTAGAGGTGGGAGGTCCAAATTTTTGATCCTTGACTCGAAAAACTTTAATTATTTTAGTTTTTTTTTAAGGGAAAACTACTGCAAAACTGTACTTACATGATTCAAAAACAATGTCCTTTCTTTTCGTGATTTTTCTTTTTGGTCATTTAACTCCTTGGGTTACTATAGTTTTACTATTTTATTCTAAGATTTTTGCTATGTGTAAGTGATTTAGGCGTTTTTCAATTAGTCCTAAGCCGTCGTAGAGATCAACTTTCTATTGAGAATTAAGTTTTTATGTCGTGGAGTTTCCGCAGAAACCAATAAGGATTTTTTTATTTGCTTATAGTTCTTGCATTGAATATGGTGTGGTTGTCTCATAGAAAAAAATCAATAAAAAAAAGATTGATGTCTTATGCCCCTAAGTTTTTGATTATTTTTTTGTTCTTGTTGTTGCTATTTTAATGTTGGTTTTTGTTCTTGTTAGGAGTATCGGTTTTGGTTTTTTATCTGAACTTAAGTAAATTGGATTTGGTTATTAAGTTTCTGGTTTTTTACTATAATTTTATGCTCTATTCATTTAAGTTTCTTATGAATCTTAGTCCCCCTAATGTTTTTAATACTTTTTTGTTCTTGTTGTTGCTCTTTTAATATTCCGCTTATGGCTTCTGGTTCCTTATCCGAACTTAAGTAATTTGGATTTGGTTTATATATAGCACTTCTAATAAACACTATAAAAGTAGGAAAAAAAAAGCAGAAAAGAAAAAACGTAAAAGTGGGAAAAGATTATTTAAGTTTTGGTGCGATATTTGGATTTGATAAATCTGATAGGTATTTTGATTTTGACTTTAGTTCATGTAGGAGTTATTTCAATAACCATGATGGTTGATCTTGCTATAAAATGTTTTTCCATGTTCTTTTTATGCAGGAGGCGGCTATTTAATATTATAAATGATTTGCCAACTGTATTTGAAGTGGTCACCAATATTGCAAAGAAACAAGTTAAGGAAAAATCATCAACTGCAAATGGTAGCAAATCCAAGTCAAGTTTTAAATCGGTATGTGTAtNATTTGAAGTGGTCACCAATATTGCAAAGAAACAAGTTAAGGAAAAATCATCAAGTGCAAATGGTAGCAAATCTAAGTCAAGTTTTAAATTTGTATGTGTATCGTGATCTTCATTTTTTCAGTTGGTTAACTAATTTTACTTGTGGTACTCTATTTTTGAATGTAACTCTTTTTTTATTTGATACCATTTGAGCTATTCTCTGTTTGGTGTCCTCTCTTGGATAGTCTCTAATTTTTCAGTTGGTTAACGATGTGtTTTTTTTTTTTTTTtATTTATTTTATCTATTTTTCTAGAAATGA

mRNA sequence

ATGGCCATGAACAACAATGGAAACAAAGAGATATCCCCTTTAGGAGCTGCTGCTGCCACCGTTACCGGGCGAGCCATTACCGATGATGCTAAAATGAAAATGCAGAAAAGGAGTGCAAGTGGTAACTTGGTGAATGATGCTGCCATTATTCTTAGAAAAACTGAGTACGAAGGGAAAACTACTGCAAAACTGAGGCGGCTATTTAATATTATAAATGATTTGCCAACTGTATTTGAAGTGGTCACCAATATTGCAAAGAAACAAGTTAAGGAAAAATCATCAACTGCAAATGGTAGCAAATCCAAGTCAAGTTTTAAATCGAAATGA

Coding sequence (CDS)

ATGGCCATGAACAACAATGGAAACAAAGAGATATCCCCTTTAGGAGCTGCTGCTGCCACCGTTACCGGGCGAGCCATTACCGATGATGCTAAAATGAAAATGCAGAAAAGGAGTGCAAGTGGTAACTTGGTGAATGATGCTGCCATTATTCTTAGAAAAACTGAGTACGAAGGGAAAACTACTGCAAAACTGAGGCGGCTATTTAATATTATAAATGATTTGCCAACTGTATTTGAAGTGGTCACCAATATTGCAAAGAAACAAGTTAAGGAAAAATCATCAACTGCAAATGGTAGCAAATCCAAGTCAAGTTTTAAATCGAAATGA

Protein sequence

MAMNNNGNKEISPLGAAAATVTGRAITDDAKMKMQKRSASGNLVNDAAIILRKTEYEGKTTAKLRRLFNIINDLPTVFEVVTNIAKKQVKEKSSTANGSKSKSSFKSK
Homology
[Close]
BLAST of MELO3C029638.2.1 vs. NCBI nr
Match: XP_004141692.1 (PREDICTED: PHD finger protein ALFIN-LIKE 3-like isoform X1 [Cucumis sativus] >KGN45504.1 hypothetical protein Csa_7G450620 [Cucumis sativus])

HSP 1 Score: 75.5 bits (184), Expect = 1.3e-10
Identity = 41/44 (93.18%), Postives = 43/44 (97.73%), Query Frame = 0 

Query: 65  RRLFNIINDLPTVFEVVTNIAKKQVKEKSSTANGSKSKSSFKSK 109
           RRLFN+INDLPTVFEVVT IAKKQVKEKSSTANGSKSKSSFKS+
Sbjct: 121 RRLFNMINDLPTVFEVVTGIAKKQVKEKSSTANGSKSKSSFKSR 164

[Close]
BLAST of MELO3C029638.2.1 vs. NCBI nr
Match: XP_011659633.1 (PREDICTED: PHD finger protein ALFIN-LIKE 4-like isoform X2 [Cucumis sativus])

HSP 1 Score: 75.1 bits (183), Expect = 1.6e-10
Identity = 41/43 (95.35%), Postives = 42/43 (97.67%), Query Frame = 0 

Query: 65  RRLFNIINDLPTVFEVVTNIAKKQVKEKSSTANGSKSKSSFKS 108
           RRLFN+INDLPTVFEVVT IAKKQVKEKSSTANGSKSKSSFKS
Sbjct: 121 RRLFNMINDLPTVFEVVTGIAKKQVKEKSSTANGSKSKSSFKS 163

[Close]
BLAST of MELO3C029638.2.1 vs. NCBI nr
Match: XP_008462330.1 (PREDICTED: PHD finger protein ALFIN-LIKE 3-like isoform X1 [Cucumis melo])

HSP 1 Score: 73.6 bits (179), Expect = 4.8e-10
Identity = 40/43 (93.02%), Postives = 42/43 (97.67%), Query Frame = 0 

Query: 65  RRLFNIINDLPTVFEVVTNIAKKQVKEKSSTANGSKSKSSFKS 108
           RRLFN+INDLPTVFEVVT IAKKQVKEKSS+ANGSKSKSSFKS
Sbjct: 121 RRLFNMINDLPTVFEVVTGIAKKQVKEKSSSANGSKSKSSFKS 163

[Close]
BLAST of MELO3C029638.2.1 vs. NCBI nr
Match: XP_022992372.1 (PHD finger protein ALFIN-LIKE 3-like [Cucurbita maxima])

HSP 1 Score: 70.5 bits (171), Expect = 4.0e-09
Identity = 39/51 (76.47%), Postives = 44/51 (86.27%), Query Frame = 0 

Query: 58  GKTTAKLRRLFNIINDLPTVFEVVTNIAKKQVKEKSSTANGSKSKSSFKSK 109
           G   A  RRLFN+INDLPTVFEVVT +AKKQVKEKSS+ANGSKSKSS K++
Sbjct: 114 GFDKADRRRLFNMINDLPTVFEVVTGLAKKQVKEKSSSANGSKSKSSLKTR 164

[Close]
BLAST of MELO3C029638.2.1 vs. NCBI nr
Match: XP_022953587.1 (PHD finger protein ALFIN-LIKE 3-like [Cucurbita moschata])

HSP 1 Score: 69.3 bits (168), Expect = 9.0e-09
Identity = 38/51 (74.51%), Postives = 44/51 (86.27%), Query Frame = 0 

Query: 58  GKTTAKLRRLFNIINDLPTVFEVVTNIAKKQVKEKSSTANGSKSKSSFKSK 109
           G   A  RRLFN+INDLPTVFEVVT +AKKQVKEK+S+ANGSKSKSS K++
Sbjct: 114 GFDKADRRRLFNMINDLPTVFEVVTGLAKKQVKEKASSANGSKSKSSLKTR 164

[Close]
BLAST of MELO3C029638.2.1 vs. TAIR10
Match: AT5G26210.1 (alfin-like 4)

HSP 1 Score: 45.4 bits (106), Expect = 2.5e-05
Identity = 22/36 (61.11%), Postives = 27/36 (75.00%), Query Frame = 0 

Query: 58  GKTTAKLRRLFNIINDLPTVFEVVTNIAKKQVKEKS 94
           G   A  +RLFN++NDLPT+FEVV   AKKQ K+KS
Sbjct: 114 GFDKADRKRLFNMVNDLPTIFEVVAGTAKKQGKDKS 149

[Close]
BLAST of MELO3C029638.2.1 vs. TAIR10
Match: AT5G20510.1 (alfin-like 5)

HSP 1 Score: 41.2 bits (95), Expect = 4.7e-04
Identity = 21/39 (53.85%), Postives = 29/39 (74.36%), Query Frame = 0 

Query: 58  GKTTAKLRRLFNIINDLPTVFEVVTNIAKKQVKEKSSTA 97
           G   A  +RLF++IN++PTV+EVVT  A+KQ KE  S+A
Sbjct: 115 GFDRADRKRLFSMINEVPTVYEVVTGNAEKQTKEMPSSA 153

[Close]
BLAST of MELO3C029638.2.1 vs. Swiss-Prot
Match: sp|A2Y4R8|ALFL5_ORYSI (PHD finger protein ALFIN-LIKE 5 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19996 PE=3 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.2e-04
Identity = 22/28 (78.57%), Postives = 25/28 (89.29%), Query Frame = 0 

Query: 65  RRLFNIINDLPTVFEVVTNIAKKQVKEK 93
           RRLFN+IN+LPT+FEVVT  AKKQ KEK
Sbjct: 123 RRLFNMINNLPTIFEVVTGAAKKQTKEK 150

[Close]
BLAST of MELO3C029638.2.1 vs. Swiss-Prot
Match: sp|Q60DW3|ALFL5_ORYSJ (PHD finger protein ALFIN-LIKE 5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0419100 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.2e-04
Identity = 22/28 (78.57%), Postives = 25/28 (89.29%), Query Frame = 0 

Query: 65  RRLFNIINDLPTVFEVVTNIAKKQVKEK 93
           RRLFN+IN+LPT+FEVVT  AKKQ KEK
Sbjct: 123 RRLFNMINNLPTIFEVVTGAAKKQTKEK 150

[Close]
BLAST of MELO3C029638.2.1 vs. Swiss-Prot
Match: sp|O81488|ALFL4_ARATH (PHD finger protein ALFIN-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=AL4 PE=1 SV=2)

HSP 1 Score: 45.4 bits (106), Expect = 4.5e-04
Identity = 22/36 (61.11%), Postives = 27/36 (75.00%), Query Frame = 0 

Query: 58  GKTTAKLRRLFNIINDLPTVFEVVTNIAKKQVKEKS 94
           G   A  +RLFN++NDLPT+FEVV   AKKQ K+KS
Sbjct: 114 GFDKADRKRLFNMVNDLPTIFEVVAGTAKKQGKDKS 149

[Close]
BLAST of MELO3C029638.2.1 vs. Swiss-Prot
Match: sp|B8BJV8|ALFL8_ORYSI (PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_35671 PE=3 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 4.5e-04
Identity = 23/42 (54.76%), Postives = 32/42 (76.19%), Query Frame = 0 

Query: 65  RRLFNIINDLPTVFEVVTNIAKKQVKEKSSTANGSKSKSSFK 107
           +RLF++IN+LPT++EVVT  AKKQ KEK+   +G  +KS  K
Sbjct: 119 KRLFSMINNLPTIYEVVTGTAKKQSKEKTPKTSGKSNKSGTK 160

[Close]
BLAST of MELO3C029638.2.1 vs. Swiss-Prot
Match: sp|Q2R837|ALFL8_ORYSJ (PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0244800 PE=2 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 4.5e-04
Identity = 23/42 (54.76%), Postives = 32/42 (76.19%), Query Frame = 0 

Query: 65  RRLFNIINDLPTVFEVVTNIAKKQVKEKSSTANGSKSKSSFK 107
           +RLF++IN+LPT++EVVT  AKKQ KEK+   +G  +KS  K
Sbjct: 119 KRLFSMINNLPTIYEVVTGTAKKQSKEKTPKTSGKSNKSGTK 160

[Close]
BLAST of MELO3C029638.2.1 vs. TrEMBL
Match: tr|A0A0A0K9L1|A0A0A0K9L1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450620 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 8.3e-11
Identity = 41/44 (93.18%), Postives = 43/44 (97.73%), Query Frame = 0 

Query: 65  RRLFNIINDLPTVFEVVTNIAKKQVKEKSSTANGSKSKSSFKSK 109
           RRLFN+INDLPTVFEVVT IAKKQVKEKSSTANGSKSKSSFKS+
Sbjct: 121 RRLFNMINDLPTVFEVVTGIAKKQVKEKSSTANGSKSKSSFKSR 164

[Close]
BLAST of MELO3C029638.2.1 vs. TrEMBL
Match: tr|A0A1S3CI87|A0A1S3CI87_CUCME (PHD finger protein ALFIN-LIKE 3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500707 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.1e-10
Identity = 40/43 (93.02%), Postives = 42/43 (97.67%), Query Frame = 0 

Query: 65  RRLFNIINDLPTVFEVVTNIAKKQVKEKSSTANGSKSKSSFKS 108
           RRLFN+INDLPTVFEVVT IAKKQVKEKSS+ANGSKSKSSFKS
Sbjct: 121 RRLFNMINDLPTVFEVVTGIAKKQVKEKSSSANGSKSKSSFKS 163

[Close]
BLAST of MELO3C029638.2.1 vs. TrEMBL
Match: tr|A0A1S3CGR0|A0A1S3CGR0_CUCME (PHD finger protein ALFIN-LIKE 3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500707 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-06
Identity = 31/34 (91.18%), Postives = 33/34 (97.06%), Query Frame = 0 

Query: 65  RRLFNIINDLPTVFEVVTNIAKKQVKEKSSTANG 99
           RRLFN+INDLPTVFEVVT IAKKQVKEKSS+ANG
Sbjct: 121 RRLFNMINDLPTVFEVVTGIAKKQVKEKSSSANG 154

[Close]
BLAST of MELO3C029638.2.1 vs. TrEMBL
Match: tr|A0A1S4E514|A0A1S4E514_CUCME (PHD finger protein ALFIN-LIKE 3-like OS=Cucumis melo OX=3656 GN=LOC107992128 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.0e-06
Identity = 32/34 (94.12%), Postives = 34/34 (100.00%), Query Frame = 0 

Query: 74  LPTVFEVVTNIAKKQVKEKSSTANGSKSKSSFKS 108
           +PTVFEVVTNIAK+QVKEKSSTANGSKSKSSFKS
Sbjct: 1   MPTVFEVVTNIAKQQVKEKSSTANGSKSKSSFKS 34

[Close]
BLAST of MELO3C029638.2.1 vs. TrEMBL
Match: tr|F6H3R5|F6H3R5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_04s0008g01670 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.4e-05
Identity = 33/51 (64.71%), Postives = 38/51 (74.51%), Query Frame = 0 

Query: 58  GKTTAKLRRLFNIINDLPTVFEVVTNIAKKQVKEKSSTANGSKSKSSFKSK 109
           G   A  +RLFN+INDLPT+FEVVT  AKKQVKEKSS +N S +KS   SK
Sbjct: 114 GFDKADRKRLFNMINDLPTIFEVVTGTAKKQVKEKSSVSNHSSNKSKSNSK 164

The following BLAST results are available for this feature:
BLAST of MELO3C029638.2.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004141692.11.3e-1093.18PREDICTED: PHD finger protein ALFIN-LIKE 3-like isoform X1 [Cucumis sativus] >KG... [more]
XP_011659633.11.6e-1095.35PREDICTED: PHD finger protein ALFIN-LIKE 4-like isoform X2 [Cucumis sativus][more]
XP_008462330.14.8e-1093.02PREDICTED: PHD finger protein ALFIN-LIKE 3-like isoform X1 [Cucumis melo][more]
XP_022992372.14.0e-0976.47PHD finger protein ALFIN-LIKE 3-like [Cucurbita maxima][more]
XP_022953587.19.0e-0974.51PHD finger protein ALFIN-LIKE 3-like [Cucurbita moschata][more]
BLAST of MELO3C029638.2.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G26210.12.5e-0561.11alfin-like 4[more]
AT5G20510.14.7e-0453.85alfin-like 5[more]
BLAST of MELO3C029638.2.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|A2Y4R8|ALFL5_ORYSI1.2e-0478.57PHD finger protein ALFIN-LIKE 5 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19... [more]
sp|Q60DW3|ALFL5_ORYSJ1.2e-0478.57PHD finger protein ALFIN-LIKE 5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05... [more]
sp|O81488|ALFL4_ARATH4.5e-0461.11PHD finger protein ALFIN-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=AL4 PE=1 SV=2[more]
sp|B8BJV8|ALFL8_ORYSI4.5e-0454.76PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_35... [more]
sp|Q2R837|ALFL8_ORYSJ4.5e-0454.76PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11... [more]
BLAST of MELO3C029638.2.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K9L1|A0A0A0K9L1_CUCSA8.3e-1193.18Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450620 PE=4 SV=1[more]
tr|A0A1S3CI87|A0A1S3CI87_CUCME3.1e-1093.02PHD finger protein ALFIN-LIKE 3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S3CGR0|A0A1S3CGR0_CUCME1.2e-0691.18PHD finger protein ALFIN-LIKE 3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S4E514|A0A1S4E514_CUCME8.0e-0694.12PHD finger protein ALFIN-LIKE 3-like OS=Cucumis melo OX=3656 GN=LOC107992128 PE=... [more]
tr|F6H3R5|F6H3R5_VITVI1.4e-0564.71Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_04s0008g01670 PE=4 SV=... [more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0042393 histone binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008270 zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C029638.2MELO3C029638.2gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C029638.2.1MELO3C029638.2.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C029638.2.1.exon.1MELO3C029638.2.1.exon.1exon
MELO3C029638.2.1.exon.2MELO3C029638.2.1.exon.2exon
MELO3C029638.2.1.exon.3MELO3C029638.2.1.exon.3exon
MELO3C029638.2.1.exon.4MELO3C029638.2.1.exon.4exon
MELO3C029638.2.1.exon.5MELO3C029638.2.1.exon.5exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C029638.2.1.CDS.1MELO3C029638.2.1.CDS.1CDS
MELO3C029638.2.1.CDS.2MELO3C029638.2.1.CDS.2CDS
MELO3C029638.2.1.CDS.3MELO3C029638.2.1.CDS.3CDS
MELO3C029638.2.1.CDS.4MELO3C029638.2.1.CDS.4CDS
MELO3C029638.2.1.CDS.5MELO3C029638.2.1.CDS.5CDS


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..108