CsGy6G027470.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGCCACTCGGGTTTTAACTTACTTCTTTCTATTCATCATCTTGTCTCACCATCTCGTTGTTATTGAAGGAAGGAGATTGAAAGTAAAAAAAAATGGGCTACGTTGTGGAACTTGCATGACTCCCACCACTCCAAAAACCATAACCAAATCAGAAGAGGAAGCACAAAAAAGCACTAATAATAAGCTCCACCACAGAATTGCCGATGGCTATGTGGATGCCTTCCGCCCCACCACCCCCGGCCATAGTCCCGGCGTTGGTCACTCCATTCAAAACCGATAA ATGGCCGCCACTCGGGTTTTAACTTACTTCTTTCTATTCATCATCTTGTCTCACCATCTCGTTGTTATTGAAGGAAGGAGATTGAAAGTAAAAAAAAATGGGCTACGTTGTGGAACTTGCATGACTCCCACCACTCCAAAAACCATAACCAAATCAGAAGAGGAAGCACAAAAAAGCACTAATAATAAGCTCCACCACAGAATTGCCGATGGCTATGTGGATGCCTTCCGCCCCACCACCCCCGGCCATAGTCCCGGCGTTGGTCACTCCATTCAAAACCGATAA ATGGCCGCCACTCGGGTTTTAACTTACTTCTTTCTATTCATCATCTTGTCTCACCATCTCGTTGTTATTGAAGGAAGGAGATTGAAAGTAAAAAAAAATGGGCTACGTTGTGGAACTTGCATGACTCCCACCACTCCAAAAACCATAACCAAATCAGAAGAGGAAGCACAAAAAAGCACTAATAATAAGCTCCACCACAGAATTGCCGATGGCTATGTGGATGCCTTCCGCCCCACCACCCCCGGCCATAGTCCCGGCGTTGGTCACTCCATTCAAAACCGATAA MAATRVLTYFFLFIILSHHLVVIEGRRLKVKKNGLRCGTCMTPTTPKTITKSEEEAQKSTNNKLHHRIADGYVDAFRPTTPGHSPGVGHSIQNR
BLAST of CsGy6G027470.1 vs. NCBI nr
Match: KGN48514.1 (hypothetical protein Csa_6G490780 [Cucumis sativus]) HSP 1 Score: 193.0 bits (489), Expect = 4.7e-46 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of CsGy6G027470.1 vs. NCBI nr
Match: PIA46381.1 (hypothetical protein AQUCO_01500130v1 [Aquilegia coerulea]) HSP 1 Score: 75.1 bits (183), Expect = 1.4e-10 Identity = 40/84 (47.62%), Postives = 57/84 (67.86%), Query Frame = 0
BLAST of CsGy6G027470.1 vs. NCBI nr
Match: ONH96545.1 (hypothetical protein PRUPE_7G136000 [Prunus persica]) HSP 1 Score: 74.7 bits (182), Expect = 1.9e-10 Identity = 41/84 (48.81%), Postives = 54/84 (64.29%), Query Frame = 0
BLAST of CsGy6G027470.1 vs. NCBI nr
Match: ESR39096.1 (hypothetical protein CICLE_v10027106mg [Citrus clementina]) HSP 1 Score: 73.9 bits (180), Expect = 3.2e-10 Identity = 43/96 (44.79%), Postives = 59/96 (61.46%), Query Frame = 0
BLAST of CsGy6G027470.1 vs. NCBI nr
Match: PNT27019.1 (hypothetical protein POPTR_007G041500v3 [Populus trichocarpa]) HSP 1 Score: 72.0 bits (175), Expect = 1.2e-09 Identity = 40/95 (42.11%), Postives = 58/95 (61.05%), Query Frame = 0
BLAST of CsGy6G027470.1 vs. TAIR10
Match: AT2G23440.1 (unknown protein) HSP 1 Score: 45.1 bits (105), Expect = 2.9e-05 Identity = 33/93 (35.48%), Postives = 43/93 (46.24%), Query Frame = 0
BLAST of CsGy6G027470.1 vs. Swiss-Prot
Match: sp|O80460|PCEP3_ARATH (Precursor of CEP3 OS=Arabidopsis thaliana OX=3702 GN=CEP3 PE=1 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 5.2e-04 Identity = 33/93 (35.48%), Postives = 43/93 (46.24%), Query Frame = 0
BLAST of CsGy6G027470.1 vs. TrEMBL
Match: tr|A0A0A0KIB5|A0A0A0KIB5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490780 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 3.1e-46 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of CsGy6G027470.1 vs. TrEMBL
Match: tr|A0A2G5DS81|A0A2G5DS81_AQUCA (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_01500130v1 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 9.4e-11 Identity = 40/84 (47.62%), Postives = 57/84 (67.86%), Query Frame = 0
BLAST of CsGy6G027470.1 vs. TrEMBL
Match: tr|M5W563|M5W563_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G136000 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.2e-10 Identity = 41/84 (48.81%), Postives = 54/84 (64.29%), Query Frame = 0
BLAST of CsGy6G027470.1 vs. TrEMBL
Match: tr|V4SPP4|V4SPP4_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10027106mg PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 2.1e-10 Identity = 43/96 (44.79%), Postives = 59/96 (61.46%), Query Frame = 0
BLAST of CsGy6G027470.1 vs. TrEMBL
Match: tr|U5G8B4|U5G8B4_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_007G041500v3 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 8.0e-10 Identity = 40/95 (42.11%), Postives = 58/95 (61.05%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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