CsGy3G021630.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGAGCTCTGCTTTGGCTTTTTCACCACCTCATTGCTCCAGCGAAAGCTCCTCCATCATCACGGCGGAGAATGGTGAGTCGTGGACGAATAATCTACCGGAGGCGGATGAGAATTTTTGGAGGGAAGTTTTGGGCAGCGACCAAATGGCAACGGTGGGAAACCAACAAGGATTTGAAGGTGAAACTAGTGAACGTCAACTTGGTAATCTTACAAATGAGCAGCCAACTCATGAGACTACGGATTTTTGGACAATATTTTTTCAAGAGGAGGGGATTTATCTGAGTTGAAAGATATGATATTATGAGGTTGATGAAGCTAATTAGTTTTTTTTTCTTTTGGGTGGGAAAAACTTAGTGGGTTATAATGACAATAGGCTACTTTTCTTTTCTTTTTTTCCATTTTTTTGACCTTTTAGGGGGAGAGATTGTATTCACCATTCCAAAAGTTGTCAAAATTTATGGGGTTTTACACATCACAACGTTTAGAAAGGAAAAATCAGAACAGAAAAAAAAATCAGAAAAATAG ATGCCGAGCTCTGCTTTGGCTTTTTCACCACCTCATTGCTCCAGCGAAAGCTCCTCCATCATCACGGCGGAGAATGGTGAGTCGTGGACGAATAATCTACCGGAGGCGGATGAGAATTTTTGGAGGGAAGTTTTGGGCAGCGACCAAATGGCAACGGTGGGAAACCAACAAGGATTTGAAGGTGAAACTAGTGAACGTCAACTTGGGGGAGAGATTGTATTCACCATTCCAAAAGTTGTCAAAATTTATGGGGTTTTACACATCACAACGTTTAGAAAGGAAAAATCAGAACAGAAAAAAAAATCAGAAAAATAG ATGCCGAGCTCTGCTTTGGCTTTTTCACCACCTCATTGCTCCAGCGAAAGCTCCTCCATCATCACGGCGGAGAATGGTGAGTCGTGGACGAATAATCTACCGGAGGCGGATGAGAATTTTTGGAGGGAAGTTTTGGGCAGCGACCAAATGGCAACGGTGGGAAACCAACAAGGATTTGAAGGTGAAACTAGTGAACGTCAACTTGGGGGAGAGATTGTATTCACCATTCCAAAAGTTGTCAAAATTTATGGGGTTTTACACATCACAACGTTTAGAAAGGAAAAATCAGAACAGAAAAAAAAATCAGAAAAATAG MPSSALAFSPPHCSSESSSIITAENGESWTNNLPEADENFWREVLGSDQMATVGNQQGFEGETSERQLGGEIVFTIPKVVKIYGVLHITTFRKEKSEQKKKSEK
BLAST of CsGy3G021630.1 vs. NCBI nr
Match: XP_004151985.1 (PREDICTED: myb-related protein Myb4-like [Cucumis sativus]) HSP 1 Score: 141.4 bits (355), Expect = 1.8e-30 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of CsGy3G021630.1 vs. NCBI nr
Match: XP_008447428.1 (PREDICTED: myb-related protein Myb4-like [Cucumis melo]) HSP 1 Score: 118.2 bits (295), Expect = 1.6e-23 Identity = 61/70 (87.14%), Postives = 62/70 (88.57%), Query Frame = 0
BLAST of CsGy3G021630.1 vs. NCBI nr
Match: KGN57910.1 (hypothetical protein Csa_3G386830 [Cucumis sativus]) HSP 1 Score: 113.6 bits (283), Expect = 4.0e-22 Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of CsGy3G021630.1 vs. NCBI nr
Match: XP_023532934.1 (transcription factor MYB14-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 95.1 bits (235), Expect = 1.5e-16 Identity = 48/69 (69.57%), Postives = 54/69 (78.26%), Query Frame = 0
BLAST of CsGy3G021630.1 vs. NCBI nr
Match: XP_022930976.1 (transcription factor MYB14-like [Cucurbita moschata] >XP_022930977.1 transcription factor MYB14-like [Cucurbita moschata]) HSP 1 Score: 92.4 bits (228), Expect = 9.5e-16 Identity = 45/69 (65.22%), Postives = 54/69 (78.26%), Query Frame = 0
BLAST of CsGy3G021630.1 vs. TrEMBL
Match: tr|A0A1S3BI17|A0A1S3BI17_CUCME (myb-related protein Myb4-like OS=Cucumis melo OX=3656 GN=LOC103489876 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.1e-23 Identity = 61/70 (87.14%), Postives = 62/70 (88.57%), Query Frame = 0
BLAST of CsGy3G021630.1 vs. TrEMBL
Match: tr|A0A0A0L7F4|A0A0A0L7F4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G386830 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 2.6e-22 Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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