CsGy3G007220 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G007220
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionEthylene-responsive transcription factor 13
LocationChr3 : 6287392 .. 6287865 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAGCAGCAGCAGCAGCAGCTTGGAAGGGTCGTCGTCGGATTTATTTCATTTGGAGCAGATTCGGCGGCATCTTCTAGAAGATGACTTAGGGAAAGGGAGTACTCATAATAATGTTGAGGATGGAATAATCAGGTATGATATTAGTAGGAGTGGAGCTGGTTGGGAGATGAGTAATAACAACAACAATATGGTGGATCAAATGTCTTCAATTATTATTAGAGACAATCCGGAGGAGAAGTCTCAGCCTCGGCCTCGAGGTTTGCAGTTCAGAGGAGTGAGGAGGAGGCCTTGGGGGAAGTACGCGGCAGAAATCAGAGACCCGAGCAAAAAAGGAGCTCGAATATGGCTGGGAACTTACCACACCGCCCAAGACGCTGCTTTAGCTTACGATCGAGCTGCTTTTCAGATGCGAGGGGCCAAAGCAAAACTCAACTTCCCTCACATCATTTCTTCTAACAACTACTCATGA

mRNA sequence

ATGTTGAGCAGCAGCAGCAGCAGCTTGGAAGGGTCGTCGTCGGATTTATTTCATTTGGAGCAGATTCGGCGGCATCTTCTAGAAGATGACTTAGGGAAAGGGAGTACTCATAATAATGTTGAGGATGGAATAATCAGGTATGATATTAGTAGGAGTGGAGCTGGTTGGGAGATGAGTAATAACAACAACAATATGGTGGATCAAATGTCTTCAATTATTATTAGAGACAATCCGGAGGAGAAGTCTCAGCCTCGGCCTCGAGGTTTGCAGTTCAGAGGAGTGAGGAGGAGGCCTTGGGGGAAGTACGCGGCAGAAATCAGAGACCCGAGCAAAAAAGGAGCTCGAATATGGCTGGGAACTTACCACACCGCCCAAGACGCTGCTTTAGCTTACGATCGAGCTGCTTTTCAGATGCGAGGGGCCAAAGCAAAACTCAACTTCCCTCACATCATTTCTTCTAACAACTACTCATGA

Coding sequence (CDS)

ATGTTGAGCAGCAGCAGCAGCAGCTTGGAAGGGTCGTCGTCGGATTTATTTCATTTGGAGCAGATTCGGCGGCATCTTCTAGAAGATGACTTAGGGAAAGGGAGTACTCATAATAATGTTGAGGATGGAATAATCAGGTATGATATTAGTAGGAGTGGAGCTGGTTGGGAGATGAGTAATAACAACAACAATATGGTGGATCAAATGTCTTCAATTATTATTAGAGACAATCCGGAGGAGAAGTCTCAGCCTCGGCCTCGAGGTTTGCAGTTCAGAGGAGTGAGGAGGAGGCCTTGGGGGAAGTACGCGGCAGAAATCAGAGACCCGAGCAAAAAAGGAGCTCGAATATGGCTGGGAACTTACCACACCGCCCAAGACGCTGCTTTAGCTTACGATCGAGCTGCTTTTCAGATGCGAGGGGCCAAAGCAAAACTCAACTTCCCTCACATCATTTCTTCTAACAACTACTCATGA

Protein sequence

MLSSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMSNNNNNMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS
Homology
[Close]
BLAST of CsGy3G007220 vs. NCBI nr
Match: XP_004134277.1 (PREDICTED: ethylene-responsive transcription factor 1 [Cucumis sativus] >KGN56336.1 hypothetical protein Csa_3G116730 [Cucumis sativus])

HSP 1 Score: 305.8 bits (782), Expect = 8.3e-80
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 

Query: 1   MLSSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMSN 60
           MLSSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMSN
Sbjct: 1   MLSSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMSN 60

Query: 61  XXXXMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGT 120
           XXXXMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGT
Sbjct: 61  XXXXMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGT 120

Query: 121 YHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS 158
           YHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS
Sbjct: 121 YHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS 157

[Close]
BLAST of CsGy3G007220 vs. NCBI nr
Match: XP_023539438.1 (ethylene-responsive transcription factor 13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 148.7 bits (374), Expect = 1.7e-32
Identity = 89/158 (56.33%), Postives = 103/158 (65.19%), Query Frame = 0 

Query: 2   LSSSSSSLEGSSSDLFHLEQIRRHLLEDD------LGKGSTHNNVEDGIIRYDISRSGAG 61
           +SS+S+  +GSSS++F LE IRRHLLED+      LGK +      DG+   D    G G
Sbjct: 1   MSSNSNCSQGSSSEVFLLEWIRRHLLEDELDSVGGLGKNTPSLTSIDGVT--DTETPGKG 60

Query: 62  WEMSNXXXXMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGAR 121
                         SSI              RGLQFRGVRRRPWGKYAAEIRDP++KGAR
Sbjct: 61  --------------SSI--------------RGLQFRGVRRRPWGKYAAEIRDPNRKGAR 120

Query: 122 IWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS 154
           IWLGTY TA++AALAYDRAAFQMRGAKAKLNFPH+I S
Sbjct: 121 IWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGS 128

[Close]
BLAST of CsGy3G007220 vs. NCBI nr
Match: XP_022974259.1 (ethylene-responsive transcription factor 13-like [Cucurbita maxima])

HSP 1 Score: 147.9 bits (372), Expect = 2.9e-32
Identity = 89/157 (56.69%), Postives = 102/157 (64.97%), Query Frame = 0 

Query: 1   MLSSSSSSLEGSSSDLFHLEQIRRHLLEDDL----GKGSTHNNVEDGIIRYDISRSGAGW 60
           M S+S+ S   SSS++F LE IRRHLLED+L    G G    +++ G    DI   G G 
Sbjct: 1   MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELDSVGGLGKNTPSLKSGDGVTDIEAPGKG- 60

Query: 61  EMSNXXXXMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARI 120
                        SSI              RGLQFRGVRRRPWGKYAAEIRDP++KGARI
Sbjct: 61  -------------SSI--------------RGLQFRGVRRRPWGKYAAEIRDPNRKGARI 120

Query: 121 WLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS 154
           WLGTY TA++AALAYDRAAFQMRGAKAKLNFPH+I S
Sbjct: 121 WLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGS 129

[Close]
BLAST of CsGy3G007220 vs. NCBI nr
Match: XP_022950239.1 (ethylene-responsive transcription factor 1-like [Cucurbita moschata])

HSP 1 Score: 147.5 bits (371), Expect = 3.8e-32
Identity = 90/159 (56.60%), Postives = 102/159 (64.15%), Query Frame = 0 

Query: 1   MLSSSSSSLEGSSSDLFHLEQIRRHLLEDD------LGKGSTHNNVEDGIIRYDISRSGA 60
           M S+S+ S   SSS++F LE IRRHLLED+      LGK +      DG+   DI   G 
Sbjct: 1   MSSNSNCSQGSSSSEVFLLEWIRRHLLEDELDLVGGLGKNTPSLASSDGVT--DIEAPGK 60

Query: 61  GWEMSNXXXXMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGA 120
           G              SSI              RGLQFRGVRRRPWGKYAAEIRDP++KGA
Sbjct: 61  G--------------SSI--------------RGLQFRGVRRRPWGKYAAEIRDPNRKGA 120

Query: 121 RIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISS 154
           RIWLGTY TA++AALAYDRAAFQMRGAKAKLNFPH+I S
Sbjct: 121 RIWLGTYQTAEEAALAYDRAAFQMRGAKAKLNFPHMIGS 129

[Close]
BLAST of CsGy3G007220 vs. NCBI nr
Match: XP_007204071.1 (ethylene-responsive transcription factor 2 [Prunus persica] >ONI22446.1 hypothetical protein PRUPE_2G129600 [Prunus persica])

HSP 1 Score: 133.7 bits (335), Expect = 5.6e-28
Identity = 78/152 (51.32%), Postives = 99/152 (65.13%), Query Frame = 0 

Query: 12  SSSDLFHLEQIRRHLLEDDLGKGSTH--NNVEDGIIRYDISRSGAGWEMSNXXXXMVDQM 71
           +SS+   LE IR+HLL+DD    +T   +  ED    YD + S +    S+    +    
Sbjct: 7   TSSNWALLESIRQHLLDDDFENQATFLVSAAEDDAPLYDCAPSTS--SSSHAHFGVEGWG 66

Query: 72  SSIIIRDNP-EEKSQPR-----PRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHT 131
            +I I D+  + K + R     P G  FRGVRRRPWGKYAAEIRDP K GAR+WLGTY T
Sbjct: 67  DTIAILDHDLDVKVEARVNHAPPSGRHFRGVRRRPWGKYAAEIRDPKKNGARVWLGTYET 126

Query: 132 AQDAALAYDRAAFQMRGAKAKLNFPHIISSNN 156
           A+DA LAYDRAAF+MRG+KAKLNFPH+I S++
Sbjct: 127 AEDAGLAYDRAAFKMRGSKAKLNFPHLIGSHD 156

[Close]
BLAST of CsGy3G007220 vs. TAIR10
Match: AT2G44840.1 (ethylene-responsive element binding factor 13)

HSP 1 Score: 125.6 bits (314), Expect = 2.8e-29
Identity = 55/73 (75.34%), Postives = 65/73 (89.04%), Query Frame = 0 

Query: 84  PRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKA 143
           PR +G+Q+RGVRRRPWGK+AAEIRDP K GAR+WLGTY T +DAA+AYDRAAFQ+RG+KA
Sbjct: 85  PRQKGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKA 144

Query: 144 KLNFPHIISSNNY 157
           KLNFPH+I S  Y
Sbjct: 145 KLNFPHLIGSCKY 157

[Close]
BLAST of CsGy3G007220 vs. TAIR10
Match: AT4G17500.1 (ethylene responsive element binding factor 1)

HSP 1 Score: 106.7 bits (265), Expect = 1.3e-23
Identity = 48/79 (60.76%), Postives = 64/79 (81.01%), Query Frame = 0 

Query: 75  RDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRA 134
           + +P   +    +G  +RGVR+RPWGK+AAEIRDP+K GAR+WLGT+ TA+DAALAYDRA
Sbjct: 132 KTSPVSAAVTAAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRA 191

Query: 135 AFQMRGAKAKLNFPHIISS 154
           AF+MRG++A LNFP  ++S
Sbjct: 192 AFRMRGSRALLNFPLRVNS 210

[Close]
BLAST of CsGy3G007220 vs. TAIR10
Match: AT2G33710.2 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 102.1 bits (253), Expect = 3.3e-22
Identity = 54/88 (61.36%), Postives = 67/88 (76.14%), Query Frame = 0 

Query: 67  DQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQD 126
           DQ SS+ +    +EKS  R R   +RGVR+RPWGK+AAEIRDP+ K AR+WLGT+ TA++
Sbjct: 52  DQSSSLTL----QEKSNSRQR--NYRGVRQRPWGKWAAEIRDPN-KAARVWLGTFDTAEE 111

Query: 127 AALAYDRAAFQMRGAKAKLNFPHIISSN 155
           AALAYD+AAF+ RG KAKLNFP  I  N
Sbjct: 112 AALAYDKAAFEFRGHKAKLNFPEHIRVN 132

[Close]
BLAST of CsGy3G007220 vs. TAIR10
Match: AT5G47220.1 (ethylene responsive element binding factor 2)

HSP 1 Score: 101.7 bits (252), Expect = 4.3e-22
Identity = 45/63 (71.43%), Postives = 57/63 (90.48%), Query Frame = 0 

Query: 91  FRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHI 150
           +RGVR+RPWGK+AAEIRDP+K GAR+WLGT+ TA+DAALAYD AAF+MRG++A LNFP  
Sbjct: 117 YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALLNFPLR 176

Query: 151 ISS 154
           ++S
Sbjct: 177 VNS 179

[Close]
BLAST of CsGy3G007220 vs. TAIR10
Match: AT3G23220.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 101.3 bits (251), Expect = 5.6e-22
Identity = 44/61 (72.13%), Postives = 55/61 (90.16%), Query Frame = 0 

Query: 89  LQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFP 148
           +++RGVR+RPWGKYAAEIRD ++ GAR+WLGT++TA+DAA AYDRAAF MRG +A LNFP
Sbjct: 12  MKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNFP 71

Query: 149 H 150
           H
Sbjct: 72  H 72

[Close]
BLAST of CsGy3G007220 vs. Swiss-Prot
Match: sp|Q8L9K1|ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=ERF13 PE=2 SV=2)

HSP 1 Score: 125.6 bits (314), Expect = 5.0e-28
Identity = 55/73 (75.34%), Postives = 65/73 (89.04%), Query Frame = 0 

Query: 84  PRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKA 143
           PR +G+Q+RGVRRRPWGK+AAEIRDP K GAR+WLGTY T +DAA+AYDRAAFQ+RG+KA
Sbjct: 85  PRQKGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKA 144

Query: 144 KLNFPHIISSNNY 157
           KLNFPH+I S  Y
Sbjct: 145 KLNFPHLIGSCKY 157

[Close]
BLAST of CsGy3G007220 vs. Swiss-Prot
Match: sp|Q40476|ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum OX=4097 GN=ERF1 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.0e-24
Identity = 57/105 (54.29%), Postives = 71/105 (67.62%), Query Frame = 0 

Query: 55  GWEMSNXXXXMV--DQMSSIIIRDNPEEKSQPR---PRGLQFRGVRRRPWGKYAAEIRDP 114
           GW   N     V  +Q    I+    E  + P    PRG  +RGVRRRPWGK+AAEIRDP
Sbjct: 64  GWSPFNFSAGEVKSEQREEEIVVSPAETTAAPAAELPRGRHYRGVRRRPWGKFAAEIRDP 123

Query: 115 SKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN 155
           +K GAR+WLGTY T ++AA+AYD+AA++MRG+KA LNFPH I  N
Sbjct: 124 AKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKAHLNFPHRIGLN 168

[Close]
BLAST of CsGy3G007220 vs. Swiss-Prot
Match: sp|Q9LW50|ERF2_NICSY (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris OX=4096 GN=ERF2 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.4e-24
Identity = 49/69 (71.01%), Postives = 61/69 (88.41%), Query Frame = 0 

Query: 86  PRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKL 145
           P+G  +RGVR+RPWGK+AAEIRDP+K GAR+WLGTY TA++AALAYD+AA++MRG+KA L
Sbjct: 98  PKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALL 157

Query: 146 NFPHIISSN 155
           NFPH I  N
Sbjct: 158 NFPHRIGLN 166

[Close]
BLAST of CsGy3G007220 vs. Swiss-Prot
Match: sp|Q40479|ERF2_TOBAC (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum OX=4097 GN=ERF2 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.4e-24
Identity = 49/69 (71.01%), Postives = 61/69 (88.41%), Query Frame = 0 

Query: 86  PRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKL 145
           P+G  +RGVR+RPWGK+AAEIRDP+K GAR+WLGTY TA++AALAYD+AA++MRG+KA L
Sbjct: 94  PKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALL 153

Query: 146 NFPHIISSN 155
           NFPH I  N
Sbjct: 154 NFPHRIGLN 162

[Close]
BLAST of CsGy3G007220 vs. Swiss-Prot
Match: sp|Q84XB3|ERF1_SOLLC (Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum OX=4081 GN=ERF1 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.7e-23
Identity = 48/70 (68.57%), Postives = 60/70 (85.71%), Query Frame = 0 

Query: 85  RPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAK 144
           +P+G  +RGVR+RPWGK+AAEIRDP+K GAR+WLGTY +A++AALAY +AAF+MRG KA 
Sbjct: 101 QPKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYESAEEAALAYGKAAFRMRGTKAL 160

Query: 145 LNFPHIISSN 155
           LNFPH I  N
Sbjct: 161 LNFPHRIGLN 170

[Close]
BLAST of CsGy3G007220 vs. TrEMBL
Match: tr|A0A0A0L893|A0A0A0L893_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116730 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 5.5e-80
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 

Query: 1   MLSSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMSN 60
           MLSSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMSN
Sbjct: 1   MLSSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMSN 60

Query: 61  XXXXMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGT 120
           XXXXMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGT
Sbjct: 61  XXXXMVDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGT 120

Query: 121 YHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS 158
           YHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS
Sbjct: 121 YHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNYS 157

[Close]
BLAST of CsGy3G007220 vs. TrEMBL
Match: tr|M5WET5|M5WET5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G129600 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.7e-28
Identity = 78/152 (51.32%), Postives = 99/152 (65.13%), Query Frame = 0 

Query: 12  SSSDLFHLEQIRRHLLEDDLGKGSTH--NNVEDGIIRYDISRSGAGWEMSNXXXXMVDQM 71
           +SS+   LE IR+HLL+DD    +T   +  ED    YD + S +    S+    +    
Sbjct: 7   TSSNWALLESIRQHLLDDDFENQATFLVSAAEDDAPLYDCAPSTS--SSSHAHFGVEGWG 66

Query: 72  SSIIIRDNP-EEKSQPR-----PRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLGTYHT 131
            +I I D+  + K + R     P G  FRGVRRRPWGKYAAEIRDP K GAR+WLGTY T
Sbjct: 67  DTIAILDHDLDVKVEARVNHAPPSGRHFRGVRRRPWGKYAAEIRDPKKNGARVWLGTYET 126

Query: 132 AQDAALAYDRAAFQMRGAKAKLNFPHIISSNN 156
           A+DA LAYDRAAF+MRG+KAKLNFPH+I S++
Sbjct: 127 AEDAGLAYDRAAFKMRGSKAKLNFPHLIGSHD 156

[Close]
BLAST of CsGy3G007220 vs. TrEMBL
Match: tr|A0A061DUI1|A0A061DUI1_THECC (Ethylene-responsive element binding factor 13, putative OS=Theobroma cacao OX=3641 GN=TCM_005705 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.4e-27
Identity = 65/115 (56.52%), Postives = 82/115 (71.30%), Query Frame = 0 

Query: 52  SGAGW----EMSNXXXXMVDQMSSIIIRDNPEEKSQPRPR------GLQFRGVRRRPWGK 111
           + +GW    E+ N     V+++ S   R+  +E+S+  P       G+ F+GVRRRPWGK
Sbjct: 85  ANSGWSPSNEVDNYTPVAVEELVSTTTREIEKEESKVEPETSVPPSGMHFKGVRRRPWGK 144

Query: 112 YAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNNY 157
           YAAEIRDP + GARIWLGTY T +DAALAYDRAAF+MRGAKAKLNFPH+I SN +
Sbjct: 145 YAAEIRDPKRNGARIWLGTYETPEDAALAYDRAAFKMRGAKAKLNFPHLIGSNTW 199

[Close]
BLAST of CsGy3G007220 vs. TrEMBL
Match: tr|A0A2P5AYA7|A0A2P5AYA7_9ROSA (AP2/ERF transcription factor OS=Trema orientalis OX=63057 GN=TorERF18 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.1e-27
Identity = 76/156 (48.72%), Postives = 93/156 (59.62%), Query Frame = 0 

Query: 1   MLSSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMSN 60
           M  S + SL  + SD   L+ IR HLLEDD     T       +    IS        S 
Sbjct: 1   MSRSRTRSLIMTDSDYALLDSIRHHLLEDDFNFNPTATLFAPSLDINSISXXXXXXXXSG 60

Query: 61  XXXXM-VDQMSSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIRDPSKKGARIWLG 120
                 V Q++     ++    +     G +FRGVRRRPWGKYAAEIRDP K GAR+WLG
Sbjct: 61  RDAGTPVRQLNEAEETEHHVPTAASDEVGTRFRGVRRRPWGKYAAEIRDPKKNGARVWLG 120

Query: 121 TYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN 156
           TY TA+DAALAYDRAAFQ+RG+KAKLNFPH+I S++
Sbjct: 121 TYETAEDAALAYDRAAFQIRGSKAKLNFPHLIGSDH 156

[Close]
BLAST of CsGy3G007220 vs. TrEMBL
Match: tr|A0A1U8KPZ0|A0A1U8KPZ0_GOSHI (ethylene-responsive transcription factor 13-like OS=Gossypium hirsutum OX=3635 GN=LOC107919633 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.1e-27
Identity = 65/113 (57.52%), Postives = 79/113 (69.91%), Query Frame = 0 

Query: 52  SGAGWEMSNXXXXMVDQMSSIIIRDNPE---------EKSQPR-PRGLQFRGVRRRPWGK 111
           + +GW  SN      + +  +++    E         E + PR PRG+ F+GVRRRPWGK
Sbjct: 109 ANSGWTPSN-EVTAAEAVEEVVVSSGEEKEGIVNVERETNAPRPPRGMNFKGVRRRPWGK 168

Query: 112 YAAEIRDPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSN 155
           YAAEIRDP + GARIWLGTY T +DAALAYDRAAF+MRGAKAKLNFPH+I SN
Sbjct: 169 YAAEIRDPKRNGARIWLGTYETPEDAALAYDRAAFEMRGAKAKLNFPHLIGSN 220

The following BLAST results are available for this feature:
BLAST of CsGy3G007220 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004134277.18.3e-80100.00PREDICTED: ethylene-responsive transcription factor 1 [Cucumis sativus] >KGN5633... [more]
XP_023539438.11.7e-3256.33ethylene-responsive transcription factor 13-like [Cucurbita pepo subsp. pepo][more]
XP_022974259.12.9e-3256.69ethylene-responsive transcription factor 13-like [Cucurbita maxima][more]
XP_022950239.13.8e-3256.60ethylene-responsive transcription factor 1-like [Cucurbita moschata][more]
XP_007204071.15.6e-2851.32ethylene-responsive transcription factor 2 [Prunus persica] >ONI22446.1 hypothet... [more]
BLAST of CsGy3G007220 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G44840.12.8e-2975.34ethylene-responsive element binding factor 13[more]
AT4G17500.11.3e-2360.76ethylene responsive element binding factor 1[more]
AT2G33710.23.3e-2261.36Integrase-type DNA-binding superfamily protein[more]
AT5G47220.14.3e-2271.43ethylene responsive element binding factor 2[more]
AT3G23220.15.6e-2272.13Integrase-type DNA-binding superfamily protein[more]
BLAST of CsGy3G007220 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8L9K1|ERF99_ARATH5.0e-2875.34Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=E... [more]
sp|Q40476|ERF1_TOBAC2.0e-2454.29Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum OX=4097 GN=ERF1 ... [more]
sp|Q9LW50|ERF2_NICSY4.4e-2471.01Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris OX=4096 GN=ER... [more]
sp|Q40479|ERF2_TOBAC4.4e-2471.01Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum OX=4097 GN=ERF2 ... [more]
sp|Q84XB3|ERF1_SOLLC3.7e-2368.57Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum OX=4081 GN=ER... [more]
BLAST of CsGy3G007220 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L893|A0A0A0L893_CUCSA5.5e-80100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116730 PE=4 SV=1[more]
tr|M5WET5|M5WET5_PRUPE3.7e-2851.32Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G129600 PE=4 SV=1[more]
tr|A0A061DUI1|A0A061DUI1_THECC1.4e-2756.52Ethylene-responsive element binding factor 13, putative OS=Theobroma cacao OX=36... [more]
tr|A0A2P5AYA7|A0A2P5AYA7_9ROSA4.1e-2748.72AP2/ERF transcription factor OS=Trema orientalis OX=63057 GN=TorERF18 PE=4 SV=1[more]
tr|A0A1U8KPZ0|A0A1U8KPZ0_GOSHI4.1e-2757.52ethylene-responsive transcription factor 13-like OS=Gossypium hirsutum OX=3635 G... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR036955AP2/ERF_dom_sf
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G007220.1CsGy3G007220.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 130..150
score: 56.97
coord: 91..102
score: 65.91
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 90..154
e-value: 1.4E-35
score: 134.2
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 91..140
e-value: 2.2E-12
score: 46.9
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 90..148
score: 23.156
IPR001471AP2/ERF domainCDDcd00018AP2coord: 90..149
e-value: 3.92431E-28
score: 99.6534
IPR036955AP2/ERF domain superfamilyGENE3DG3DSA:3.30.730.10coord: 90..150
e-value: 9.2E-32
score: 110.7
NoneNo IPR availablePANTHERPTHR31190:SF41ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13-RELATEDcoord: 59..152
NoneNo IPR availablePANTHERPTHR31190FAMILY NOT NAMEDcoord: 59..152
IPR016177DNA-binding domain superfamilySUPERFAMILYSSF54171DNA-binding domaincoord: 91..149

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy3G007220Bhi01G000454Wax gourdcgybwgoB272
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy3G007220Cucurbita maxima (Rimu)cgybcmaB280
CsGy3G007220Cucurbita maxima (Rimu)cgybcmaB430
CsGy3G007220Cucurbita moschata (Rifu)cgybcmoB401
CsGy3G007220Cucurbita pepo (Zucchini)cgybcpeB454
CsGy3G007220Cucumber (Chinese Long) v2cgybcuB109
CsGy3G007220Bottle gourd (USVL1VR-Ls)cgyblsiB183
CsGy3G007220Bottle gourd (USVL1VR-Ls)cgyblsiB196
CsGy3G007220Melon (DHL92) v3.5.1cgybmeB200
CsGy3G007220Melon (DHL92) v3.6.1cgybmedB201
CsGy3G007220Watermelon (Charleston Gray)cgybwcgB203
CsGy3G007220Watermelon (97103) v1cgybwmB217
CsGy3G007220Wild cucumber (PI 183967)cgybcpiB110
CsGy3G007220Silver-seed gourdcarcgybB0997
CsGy3G007220Cucumber (Chinese Long) v3cgybcucB117
CsGy3G007220Watermelon (97103) v2cgybwmbB196