CsGy2G009570 (gene) Cucumber (Gy14) v2

NameCsGy2G009570
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptiondeSI-like protein At4g17486
LocationChr2 : 8970952 .. 8971272 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAACTAGCGGAAGTGTATTATGGAAATACCTATCATCTCATCACCAAGAAATGCAACCATTTTTATAACGATGTTTGTATCAGATTGACAAGAAAACCAATCCCTAGATGGATAAATCGTCTTGCTCGACTCAATAACTAACTTTCTATGTTCATGATTTGAATGTTTATGTATGGAGAGAATGCCTAAATGTAATTGGATTGGTGTTTATGGAATATAGTTTCTATGCAACTGTGTTCTCGGGTGGGATTGAATGAAATGAAGGTTGGTGAAGTAAAAGTATACCAGAACAGAGAGAAGAAGAAATTGAGCTAA

mRNA sequence

ATGGAGAAACTAGCGGAAGTGTATTATGGAAATACCTATCATCTCATCACCAAGAAATGCAACCATTTTTATAACGATGTTTGTATCAGATTGACAAGAAAACCAATCCCTAGATGGATAAATCTTTCTATGCAACTGTGTTCTCGGGTGGGATTGAATGAAATGAAGGTTGGTGAAGTAAAAGTATACCAGAACAGAGAGAAGAAGAAATTGAGCTAA

Coding sequence (CDS)

ATGGAGAAACTAGCGGAAGTGTATTATGGAAATACCTATCATCTCATCACCAAGAAATGCAACCATTTTTATAACGATGTTTGTATCAGATTGACAAGAAAACCAATCCCTAGATGGATAAATCTTTCTATGCAACTGTGTTCTCGGGTGGGATTGAATGAAATGAAGGTTGGTGAAGTAAAAGTATACCAGAACAGAGAGAAGAAGAAATTGAGCTAA

Protein sequence

MEKLAEVYYGNTYHLITKKCNHFYNDVCIRLTRKPIPRWINLSMQLCSRVGLNEMKVGEVKVYQNREKKKLS
BLAST of CsGy2G009570 vs. NCBI nr
Match: XP_004138707.1 (PREDICTED: deSI-like protein At4g17486 [Cucumis sativus] >KGN62984.1 hypothetical protein Csa_2G382570 [Cucumis sativus])

HSP 1 Score: 109.0 bits (271), Expect = 6.8e-21
Identity = 57/77 (74.03%), Postives = 60/77 (77.92%), Query Frame = 0

Query: 1   MEKLAEVYYGNTYHLITKKCNHFYNDVCIRLTRKPIPRWINLSMQ---LCS---RVGLNE 60
           MEKLAE Y GNTYHLITK CNHF NDVCIRLT KPIPRW+N   +   LC+    VGLNE
Sbjct: 97  MEKLAEEYSGNTYHLITKNCNHFCNDVCIRLTGKPIPRWVNRLARLGFLCNCVLPVGLNE 156

Query: 61  MKVGEVKVYQNREKKKL 72
           MKVGEVK  QNREKKKL
Sbjct: 157 MKVGEVKADQNREKKKL 173

BLAST of CsGy2G009570 vs. NCBI nr
Match: XP_008445255.1 (PREDICTED: deSI-like protein At4g17486 [Cucumis melo])

HSP 1 Score: 108.6 bits (270), Expect = 8.9e-21
Identity = 56/77 (72.73%), Postives = 60/77 (77.92%), Query Frame = 0

Query: 1   MEKLAEVYYGNTYHLITKKCNHFYNDVCIRLTRKPIPRWINLSMQ---LCS---RVGLNE 60
           MEKLAE Y GNTYHLITK CNHF NDVC+RLT KPIPRW+N   +   LC+    VGLNE
Sbjct: 97  MEKLAEEYSGNTYHLITKNCNHFCNDVCVRLTGKPIPRWVNRLARLGFLCNCVLPVGLNE 156

Query: 61  MKVGEVKVYQNREKKKL 72
           MKVGEVK  QNREKKKL
Sbjct: 157 MKVGEVKADQNREKKKL 173

BLAST of CsGy2G009570 vs. NCBI nr
Match: XP_022132302.1 (deSI-like protein At4g17486 [Momordica charantia])

HSP 1 Score: 92.0 bits (227), Expect = 8.6e-16
Identity = 49/73 (67.12%), Postives = 55/73 (75.34%), Query Frame = 0

Query: 1   MEKLAEVYYGNTYHLITKKCNHFYNDVCIRLTRKPIPRWINLSMQ---LCS---RVGLNE 60
           MEKLAE Y GNTYHLITK CNHF NDVC+RLT KPIPRW+N   +   LC+    VGLNE
Sbjct: 97  MEKLAEQYSGNTYHLITKNCNHFCNDVCLRLTGKPIPRWVNRLARLGFLCNCVLPVGLNE 156

Query: 61  MKVGEVKVYQNRE 68
           MKV +VK  +NRE
Sbjct: 157 MKVRQVKP-ENRE 168

BLAST of CsGy2G009570 vs. NCBI nr
Match: XP_008377676.1 (PREDICTED: deSI-like protein At4g17486 [Malus domestica])

HSP 1 Score: 91.3 bits (225), Expect = 1.5e-15
Identity = 52/80 (65.00%), Postives = 58/80 (72.50%), Query Frame = 0

Query: 1   MEKLAEVYYGNTYHLITKKCNHFYNDVCIRLTRKPIPRWINLSMQL---CSRV---GLNE 60
           MEKLAE Y GNTYHLITK CNHF NDVC RLTRKPIPRW+N   +L   C+ V   GLNE
Sbjct: 97  MEKLAEEYSGNTYHLITKNCNHFCNDVCTRLTRKPIPRWVNRLARLGFFCNCVLPAGLNE 156

Query: 61  MKVGEVK---VYQNREKKKL 72
            KV +V+   VY N +KKKL
Sbjct: 157 TKVQQVRSDGVY-NGDKKKL 175

BLAST of CsGy2G009570 vs. NCBI nr
Match: XP_022951694.1 (deSI-like protein At4g17486 [Cucurbita moschata] >XP_023537125.1 deSI-like protein At4g17486 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 90.9 bits (224), Expect = 1.9e-15
Identity = 49/77 (63.64%), Postives = 56/77 (72.73%), Query Frame = 0

Query: 1   MEKLAEVYYGNTYHLITKKCNHFYNDVCIRLTRKPIPRWINLSMQ---LCS---RVGLNE 60
           MEKLAE Y GNTYHLI + CNHF NDVC+RLT KPIPRW+N   +   LC+    VGLNE
Sbjct: 97  MEKLAEEYSGNTYHLIMRNCNHFCNDVCLRLTGKPIPRWVNRLARLGFLCNCVLPVGLNE 156

Query: 61  MKVGEVKVYQNREKKKL 72
           MKVG++K     EKKKL
Sbjct: 157 MKVGQMK----PEKKKL 169

BLAST of CsGy2G009570 vs. TAIR10
Match: AT5G25170.1 (PPPDE putative thiol peptidase family protein)

HSP 1 Score: 78.2 bits (191), Expect = 2.3e-15
Identity = 43/81 (53.09%), Postives = 54/81 (66.67%), Query Frame = 0

Query: 1   MEKLAEVYYGNTYHLITKKCNHFYNDVCIRLTRKPIPRWINLSMQ---LCSRV---GLNE 60
           MEKLAE Y GN+YHLITK CNHF NDVC++LTR+ IP W+N   +    C+ V    LNE
Sbjct: 98  MEKLAEEYSGNSYHLITKNCNHFCNDVCVQLTRRSIPSWVNRLARFGLFCNCVLPAELNE 157

Query: 61  MKVGEVKVYQNR----EKKKL 72
            KV +V+  + +    EKKKL
Sbjct: 158 TKVRQVRSKEEKIPEVEKKKL 178

BLAST of CsGy2G009570 vs. TAIR10
Match: AT2G25190.1 (PPPDE putative thiol peptidase family protein)

HSP 1 Score: 73.6 bits (179), Expect = 5.7e-14
Identity = 42/79 (53.16%), Postives = 50/79 (63.29%), Query Frame = 0

Query: 1   MEKLAEVYYGNTYHLITKKCNHFYNDVCIRLTRKPIPRWINLSMQ---LCSRV---GLNE 60
           MEKLAE Y GN YHLIT+ CNHF N+VC++L +K IPRW+N   +   LC+ V    LNE
Sbjct: 97  MEKLAEEYQGNKYHLITRNCNHFCNEVCLKLAQKSIPRWVNRLARLGVLCNCVLPPRLNE 156

Query: 61  MKVGEV--KVYQNREKKKL 72
            KV  V        EKKKL
Sbjct: 157 AKVRRVGKGELSESEKKKL 175

BLAST of CsGy2G009570 vs. TAIR10
Match: AT4G17486.1 (PPPDE putative thiol peptidase family protein)

HSP 1 Score: 66.6 bits (161), Expect = 7.0e-12
Identity = 27/41 (65.85%), Postives = 33/41 (80.49%), Query Frame = 0

Query: 1   MEKLAEVYYGNTYHLITKKCNHFYNDVCIRLTRKPIPRWIN 42
           MEKL+  Y+G+TYHLI K CNHF  +VC++LT KPIP WIN
Sbjct: 106 MEKLSRKYHGDTYHLIAKNCNHFTEEVCLQLTGKPIPGWIN 146

BLAST of CsGy2G009570 vs. TAIR10
Match: AT1G47740.1 (PPPDE putative thiol peptidase family protein)

HSP 1 Score: 65.9 bits (159), Expect = 1.2e-11
Identity = 31/63 (49.21%), Postives = 39/63 (61.90%), Query Frame = 0

Query: 1   MEKLAEVYYGNTYHLITKKCNHFYNDVCIRLTRKPIPRWINLSMQL---CSRVGLNEMKV 60
           ME +A  YYGN YHLI K CNHF  DVC +LT K IP+W+N   Q+   CS +    +K+
Sbjct: 149 MEDMACSYYGNMYHLIVKNCNHFCQDVCYKLTGKKIPKWVNRLAQIGSVCSCILPESLKI 208

BLAST of CsGy2G009570 vs. TAIR10
Match: AT4G31980.1 (unknown protein)

HSP 1 Score: 65.5 bits (158), Expect = 1.6e-11
Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = 0

Query: 1   MEKLAEVYYGNTYHLITKKCNHFYNDVCIRLTRKPIPRWINLSMQ---LCSRV---GLNE 60
           MEKL+E Y GN YHLIT+ CNHF N V ++LT K IP W+N   +   LC+ V    LNE
Sbjct: 97  MEKLSEEYQGNKYHLITRNCNHFCNHVSLKLTHKSIPSWVNRLARLGFLCNCVLPACLNE 156

BLAST of CsGy2G009570 vs. Swiss-Prot
Match: sp|Q93VG8|PPDEX_ARATH (DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.3e-10
Identity = 27/41 (65.85%), Postives = 33/41 (80.49%), Query Frame = 0

Query: 1   MEKLAEVYYGNTYHLITKKCNHFYNDVCIRLTRKPIPRWIN 42
           MEKL+  Y+G+TYHLI K CNHF  +VC++LT KPIP WIN
Sbjct: 106 MEKLSRKYHGDTYHLIAKNCNHFTEEVCLQLTGKPIPGWIN 146

BLAST of CsGy2G009570 vs. Swiss-Prot
Match: sp|Q9BSY9|DESI2_HUMAN (Deubiquitinase DESI2 OS=Homo sapiens OX=9606 GN=DESI2 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 6.1e-05
Identity = 21/41 (51.22%), Postives = 27/41 (65.85%), Query Frame = 0

Query: 1   MEKLAEVYYGNTYHLITKKCNHFYNDVCIRLTRKPIPRWIN 42
           +E+L + Y GN YHL+ K CNHF + +   L  K IPRWIN
Sbjct: 89  VEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWIN 129

BLAST of CsGy2G009570 vs. Swiss-Prot
Match: sp|Q9D291|DESI2_MOUSE (Deubiquitinase DESI2 OS=Mus musculus OX=10090 GN=Desi2 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 6.1e-05
Identity = 21/41 (51.22%), Postives = 27/41 (65.85%), Query Frame = 0

Query: 1   MEKLAEVYYGNTYHLITKKCNHFYNDVCIRLTRKPIPRWIN 42
           +E+L + Y GN YHL+ K CNHF + +   L  K IPRWIN
Sbjct: 89  VEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWIN 129

BLAST of CsGy2G009570 vs. Swiss-Prot
Match: sp|A3QRX8|DESI2_PIG (Deubiquitinase DESI2 OS=Sus scrofa OX=9823 GN=DESI2 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 6.1e-05
Identity = 21/41 (51.22%), Postives = 27/41 (65.85%), Query Frame = 0

Query: 1   MEKLAEVYYGNTYHLITKKCNHFYNDVCIRLTRKPIPRWIN 42
           +E+L + Y GN YHL+ K CNHF + +   L  K IPRWIN
Sbjct: 89  VEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWIN 129

BLAST of CsGy2G009570 vs. Swiss-Prot
Match: sp|Q5R456|DESI2_PONAB (Deubiquitinase DESI2 OS=Pongo abelii OX=9601 GN=DESI2 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 6.1e-05
Identity = 21/41 (51.22%), Postives = 27/41 (65.85%), Query Frame = 0

Query: 1   MEKLAEVYYGNTYHLITKKCNHFYNDVCIRLTRKPIPRWIN 42
           +E+L + Y GN YHL+ K CNHF + +   L  K IPRWIN
Sbjct: 89  VEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWIN 129

BLAST of CsGy2G009570 vs. TrEMBL
Match: tr|A0A0A0LPQ8|A0A0A0LPQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382570 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.5e-21
Identity = 57/77 (74.03%), Postives = 60/77 (77.92%), Query Frame = 0

Query: 1   MEKLAEVYYGNTYHLITKKCNHFYNDVCIRLTRKPIPRWINLSMQ---LCS---RVGLNE 60
           MEKLAE Y GNTYHLITK CNHF NDVCIRLT KPIPRW+N   +   LC+    VGLNE
Sbjct: 97  MEKLAEEYSGNTYHLITKNCNHFCNDVCIRLTGKPIPRWVNRLARLGFLCNCVLPVGLNE 156

Query: 61  MKVGEVKVYQNREKKKL 72
           MKVGEVK  QNREKKKL
Sbjct: 157 MKVGEVKADQNREKKKL 173

BLAST of CsGy2G009570 vs. TrEMBL
Match: tr|A0A1S3BC80|A0A1S3BC80_CUCME (deSI-like protein At4g17486 OS=Cucumis melo OX=3656 GN=LOC103488341 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 5.9e-21
Identity = 56/77 (72.73%), Postives = 60/77 (77.92%), Query Frame = 0

Query: 1   MEKLAEVYYGNTYHLITKKCNHFYNDVCIRLTRKPIPRWINLSMQ---LCS---RVGLNE 60
           MEKLAE Y GNTYHLITK CNHF NDVC+RLT KPIPRW+N   +   LC+    VGLNE
Sbjct: 97  MEKLAEEYSGNTYHLITKNCNHFCNDVCVRLTGKPIPRWVNRLARLGFLCNCVLPVGLNE 156

Query: 61  MKVGEVKVYQNREKKKL 72
           MKVGEVK  QNREKKKL
Sbjct: 157 MKVGEVKADQNREKKKL 173

BLAST of CsGy2G009570 vs. TrEMBL
Match: tr|A0A251RA78|A0A251RA78_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G391000 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.2e-15
Identity = 47/72 (65.28%), Postives = 51/72 (70.83%), Query Frame = 0

Query: 1   MEKLAEVYYGNTYHLITKKCNHFYNDVCIRLTRKPIPRWINLSMQLCSRVGLNEMKVGEV 60
           MEKLAE Y GNTYHLITK CNHF NDVC RLT KPIPRW+N   +L    GLNE KV +V
Sbjct: 97  MEKLAEEYSGNTYHLITKNCNHFCNDVCTRLTGKPIPRWVN---RLARLAGLNETKVRQV 156

Query: 61  K---VYQNREKK 70
           K   VY   +KK
Sbjct: 157 KSDGVYSGDKKK 165

BLAST of CsGy2G009570 vs. TrEMBL
Match: tr|V4UH60|V4UH60_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10009362mg PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.8e-15
Identity = 49/80 (61.25%), Postives = 56/80 (70.00%), Query Frame = 0

Query: 1   MEKLAEVYYGNTYHLITKKCNHFYNDVCIRLTRKPIPRWINLSMQ---LCSRV---GLNE 60
           MEKLAE Y GNTYHLITK CNHF NDVC++LTRKPIPRW+N   +   LC+ V   GLNE
Sbjct: 97  MEKLAEEYSGNTYHLITKNCNHFCNDVCLKLTRKPIPRWVNRLARLGFLCNCVLPAGLNE 156

Query: 61  MKVGEVKV---YQNREKKKL 72
            KV +V+        EKKKL
Sbjct: 157 TKVRQVRSDDRVTEGEKKKL 176

BLAST of CsGy2G009570 vs. TrEMBL
Match: tr|A0A2H5NWV7|A0A2H5NWV7_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_081180 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.8e-15
Identity = 49/80 (61.25%), Postives = 56/80 (70.00%), Query Frame = 0

Query: 1   MEKLAEVYYGNTYHLITKKCNHFYNDVCIRLTRKPIPRWINLSMQ---LCSRV---GLNE 60
           MEKLAE Y GNTYHLITK CNHF NDVC++LTRKPIPRW+N   +   LC+ V   GLNE
Sbjct: 97  MEKLAEEYSGNTYHLITKNCNHFCNDVCLKLTRKPIPRWVNRLARLGFLCNCVLPAGLNE 156

Query: 61  MKVGEVKV---YQNREKKKL 72
            KV +V+        EKKKL
Sbjct: 157 TKVRQVRSDDRVTEGEKKKL 176

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004138707.16.8e-2174.03PREDICTED: deSI-like protein At4g17486 [Cucumis sativus] >KGN62984.1 hypothetica... [more]
XP_008445255.18.9e-2172.73PREDICTED: deSI-like protein At4g17486 [Cucumis melo][more]
XP_022132302.18.6e-1667.12deSI-like protein At4g17486 [Momordica charantia][more]
XP_008377676.11.5e-1565.00PREDICTED: deSI-like protein At4g17486 [Malus domestica][more]
XP_022951694.11.9e-1563.64deSI-like protein At4g17486 [Cucurbita moschata] >XP_023537125.1 deSI-like prote... [more]
Match NameE-valueIdentityDescription
AT5G25170.12.3e-1553.09PPPDE putative thiol peptidase family protein[more]
AT2G25190.15.7e-1453.16PPPDE putative thiol peptidase family protein[more]
AT4G17486.17.0e-1265.85PPPDE putative thiol peptidase family protein[more]
AT1G47740.11.2e-1149.21PPPDE putative thiol peptidase family protein[more]
AT4G31980.11.6e-1153.03unknown protein[more]
Match NameE-valueIdentityDescription
sp|Q93VG8|PPDEX_ARATH1.3e-1065.85DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV... [more]
sp|Q9BSY9|DESI2_HUMAN6.1e-0551.22Deubiquitinase DESI2 OS=Homo sapiens OX=9606 GN=DESI2 PE=1 SV=1[more]
sp|Q9D291|DESI2_MOUSE6.1e-0551.22Deubiquitinase DESI2 OS=Mus musculus OX=10090 GN=Desi2 PE=1 SV=1[more]
sp|A3QRX8|DESI2_PIG6.1e-0551.22Deubiquitinase DESI2 OS=Sus scrofa OX=9823 GN=DESI2 PE=2 SV=1[more]
sp|Q5R456|DESI2_PONAB6.1e-0551.22Deubiquitinase DESI2 OS=Pongo abelii OX=9601 GN=DESI2 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A0A0LPQ8|A0A0A0LPQ8_CUCSA4.5e-2174.03Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382570 PE=4 SV=1[more]
tr|A0A1S3BC80|A0A1S3BC80_CUCME5.9e-2172.73deSI-like protein At4g17486 OS=Cucumis melo OX=3656 GN=LOC103488341 PE=4 SV=1[more]
tr|A0A251RA78|A0A251RA78_PRUPE2.2e-1565.28Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G391000 PE=4 SV=1[more]
tr|V4UH60|V4UH60_9ROSI4.8e-1561.25Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10009362mg PE=4 ... [more]
tr|A0A2H5NWV7|A0A2H5NWV7_CITUN4.8e-1561.25Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_081180 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008580PPPDE_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G009570.1CsGy2G009570.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.90.1720.30coord: 1..71
e-value: 1.8E-11
score: 45.7
NoneNo IPR availablePANTHERPTHR12378:SF12EXPRESSED PROTEINcoord: 1..71
IPR008580PPPDE putative peptidase domainPFAMPF05903Peptidase_C97coord: 1..44
e-value: 1.4E-12
score: 47.6
IPR008580PPPDE putative peptidase domainPANTHERPTHR12378UNCHARACTERIZEDcoord: 1..71

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None