CsGy2G009570.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAAACTAGCGGAAGTGTATTATGGAAATACCTATCATCTCATCACCAAGAAATGCAACCATTTTTATAACGATGTTTGTATCAGATTGACAAGAAAACCAATCCCTAGATGGATAAATCGTCTTGCTCGACTCAATAACTAACTTTCTATGTTCATGATTTGAATGTTTATGTATGGAGAGAATGCCTAAATGTAATTGGATTGGTGTTTATGGAATATAGTTTCTATGCAACTGTGTTCTCGGGTGGGATTGAATGAAATGAAGGTTGGTGAAGTAAAAGTATACCAGAACAGAGAGAAGAAGAAATTGAGCTAA ATGGAGAAACTAGCGGAAGTGTATTATGGAAATACCTATCATCTCATCACCAAGAAATGCAACCATTTTTATAACGATGTTTGTATCAGATTGACAAGAAAACCAATCCCTAGATGGATAAATCTTTCTATGCAACTGTGTTCTCGGGTGGGATTGAATGAAATGAAGGTTGGTGAAGTAAAAGTATACCAGAACAGAGAGAAGAAGAAATTGAGCTAA ATGGAGAAACTAGCGGAAGTGTATTATGGAAATACCTATCATCTCATCACCAAGAAATGCAACCATTTTTATAACGATGTTTGTATCAGATTGACAAGAAAACCAATCCCTAGATGGATAAATCTTTCTATGCAACTGTGTTCTCGGGTGGGATTGAATGAAATGAAGGTTGGTGAAGTAAAAGTATACCAGAACAGAGAGAAGAAGAAATTGAGCTAA MEKLAEVYYGNTYHLITKKCNHFYNDVCIRLTRKPIPRWINLSMQLCSRVGLNEMKVGEVKVYQNREKKKLS
BLAST of CsGy2G009570.1 vs. NCBI nr
Match: XP_004138707.1 (PREDICTED: deSI-like protein At4g17486 [Cucumis sativus] >KGN62984.1 hypothetical protein Csa_2G382570 [Cucumis sativus]) HSP 1 Score: 109.0 bits (271), Expect = 6.8e-21 Identity = 57/77 (74.03%), Postives = 60/77 (77.92%), Query Frame = 0
BLAST of CsGy2G009570.1 vs. NCBI nr
Match: XP_008445255.1 (PREDICTED: deSI-like protein At4g17486 [Cucumis melo]) HSP 1 Score: 108.6 bits (270), Expect = 8.9e-21 Identity = 56/77 (72.73%), Postives = 60/77 (77.92%), Query Frame = 0
BLAST of CsGy2G009570.1 vs. NCBI nr
Match: XP_022132302.1 (deSI-like protein At4g17486 [Momordica charantia]) HSP 1 Score: 92.0 bits (227), Expect = 8.6e-16 Identity = 49/73 (67.12%), Postives = 55/73 (75.34%), Query Frame = 0
BLAST of CsGy2G009570.1 vs. NCBI nr
Match: XP_008377676.1 (PREDICTED: deSI-like protein At4g17486 [Malus domestica]) HSP 1 Score: 91.3 bits (225), Expect = 1.5e-15 Identity = 52/80 (65.00%), Postives = 58/80 (72.50%), Query Frame = 0
BLAST of CsGy2G009570.1 vs. NCBI nr
Match: XP_022951694.1 (deSI-like protein At4g17486 [Cucurbita moschata] >XP_023537125.1 deSI-like protein At4g17486 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 90.9 bits (224), Expect = 1.9e-15 Identity = 49/77 (63.64%), Postives = 56/77 (72.73%), Query Frame = 0
BLAST of CsGy2G009570.1 vs. TAIR10
Match: AT5G25170.1 (PPPDE putative thiol peptidase family protein) HSP 1 Score: 78.2 bits (191), Expect = 2.3e-15 Identity = 43/81 (53.09%), Postives = 54/81 (66.67%), Query Frame = 0
BLAST of CsGy2G009570.1 vs. TAIR10
Match: AT2G25190.1 (PPPDE putative thiol peptidase family protein) HSP 1 Score: 73.6 bits (179), Expect = 5.7e-14 Identity = 42/79 (53.16%), Postives = 50/79 (63.29%), Query Frame = 0
BLAST of CsGy2G009570.1 vs. TAIR10
Match: AT4G17486.1 (PPPDE putative thiol peptidase family protein) HSP 1 Score: 66.6 bits (161), Expect = 7.0e-12 Identity = 27/41 (65.85%), Postives = 33/41 (80.49%), Query Frame = 0
BLAST of CsGy2G009570.1 vs. TAIR10
Match: AT1G47740.1 (PPPDE putative thiol peptidase family protein) HSP 1 Score: 65.9 bits (159), Expect = 1.2e-11 Identity = 31/63 (49.21%), Postives = 39/63 (61.90%), Query Frame = 0
BLAST of CsGy2G009570.1 vs. TAIR10
Match: AT4G31980.1 (unknown protein) HSP 1 Score: 65.5 bits (158), Expect = 1.6e-11 Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = 0
BLAST of CsGy2G009570.1 vs. Swiss-Prot
Match: sp|Q93VG8|PPDEX_ARATH (DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 1.3e-10 Identity = 27/41 (65.85%), Postives = 33/41 (80.49%), Query Frame = 0
BLAST of CsGy2G009570.1 vs. Swiss-Prot
Match: sp|Q9BSY9|DESI2_HUMAN (Deubiquitinase DESI2 OS=Homo sapiens OX=9606 GN=DESI2 PE=1 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 6.1e-05 Identity = 21/41 (51.22%), Postives = 27/41 (65.85%), Query Frame = 0
BLAST of CsGy2G009570.1 vs. Swiss-Prot
Match: sp|Q9D291|DESI2_MOUSE (Deubiquitinase DESI2 OS=Mus musculus OX=10090 GN=Desi2 PE=1 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 6.1e-05 Identity = 21/41 (51.22%), Postives = 27/41 (65.85%), Query Frame = 0
BLAST of CsGy2G009570.1 vs. Swiss-Prot
Match: sp|A3QRX8|DESI2_PIG (Deubiquitinase DESI2 OS=Sus scrofa OX=9823 GN=DESI2 PE=2 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 6.1e-05 Identity = 21/41 (51.22%), Postives = 27/41 (65.85%), Query Frame = 0
BLAST of CsGy2G009570.1 vs. Swiss-Prot
Match: sp|Q5R456|DESI2_PONAB (Deubiquitinase DESI2 OS=Pongo abelii OX=9601 GN=DESI2 PE=2 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 6.1e-05 Identity = 21/41 (51.22%), Postives = 27/41 (65.85%), Query Frame = 0
BLAST of CsGy2G009570.1 vs. TrEMBL
Match: tr|A0A0A0LPQ8|A0A0A0LPQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382570 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 4.5e-21 Identity = 57/77 (74.03%), Postives = 60/77 (77.92%), Query Frame = 0
BLAST of CsGy2G009570.1 vs. TrEMBL
Match: tr|A0A1S3BC80|A0A1S3BC80_CUCME (deSI-like protein At4g17486 OS=Cucumis melo OX=3656 GN=LOC103488341 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 5.9e-21 Identity = 56/77 (72.73%), Postives = 60/77 (77.92%), Query Frame = 0
BLAST of CsGy2G009570.1 vs. TrEMBL
Match: tr|A0A251RA78|A0A251RA78_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G391000 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 2.2e-15 Identity = 47/72 (65.28%), Postives = 51/72 (70.83%), Query Frame = 0
BLAST of CsGy2G009570.1 vs. TrEMBL
Match: tr|V4UH60|V4UH60_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10009362mg PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 4.8e-15 Identity = 49/80 (61.25%), Postives = 56/80 (70.00%), Query Frame = 0
BLAST of CsGy2G009570.1 vs. TrEMBL
Match: tr|A0A2H5NWV7|A0A2H5NWV7_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_081180 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 4.8e-15 Identity = 49/80 (61.25%), Postives = 56/80 (70.00%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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