CsGy2G007080.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAACCCAAAAGCTTGCTACAATGTCAATTGTTGTTTGTATGATATTTGCATGTATTGTATCAACAAGTATGCTTTTAACGATTCTTAGCTTCTCTAATTCCATAAAATTATTTTTGCTAGAACAATGTTTTAAACAATGTTATTTTTTGGTAATATGACAGCGAAAGGAGACATTTTGAACGTGCATTGTGTTCGACCATGCTCTGATACTTATGACGACGAGTCATGTTATAATGATTGCATCCGAGAGAATCTTGGTGCTGGGTTTTGTTACCCAAAGCTACCTAGCACTGATAAAGATTGCTGCTGCAATGTTTGA ATGGCAACCCAAAAGCTTGCTACAATGTCAATTGTTGTTTGTATGATATTTGCATGTATTGTATCAACAACGAAAGGAGACATTTTGAACGTGCATTGTGTTCGACCATGCTCTGATACTTATGACGACGAGTCATGTTATAATGATTGCATCCGAGAGAATCTTGGTGCTGGGTTTTGTTACCCAAAGCTACCTAGCACTGATAAAGATTGCTGCTGCAATGTTTGA ATGGCAACCCAAAAGCTTGCTACAATGTCAATTGTTGTTTGTATGATATTTGCATGTATTGTATCAACAACGAAAGGAGACATTTTGAACGTGCATTGTGTTCGACCATGCTCTGATACTTATGACGACGAGTCATGTTATAATGATTGCATCCGAGAGAATCTTGGTGCTGGGTTTTGTTACCCAAAGCTACCTAGCACTGATAAAGATTGCTGCTGCAATGTTTGA MATQKLATMSIVVCMIFACIVSTTKGDILNVHCVRPCSDTYDDESCYNDCIRENLGAGFCYPKLPSTDKDCCCNV
BLAST of CsGy2G007080.1 vs. NCBI nr
Match: KGN61228.1 (hypothetical protein Csa_2G071930 [Cucumis sativus]) HSP 1 Score: 155.2 bits (391), Expect = 8.6e-35 Identity = 70/75 (93.33%), Postives = 73/75 (97.33%), Query Frame = 0
BLAST of CsGy2G007080.1 vs. NCBI nr
Match: KGN61229.1 (hypothetical protein Csa_2G072430 [Cucumis sativus]) HSP 1 Score: 150.6 bits (379), Expect = 2.1e-33 Identity = 68/74 (91.89%), Postives = 71/74 (95.95%), Query Frame = 0
BLAST of CsGy2G007080.1 vs. NCBI nr
Match: KGN61227.1 (hypothetical protein Csa_2G070930 [Cucumis sativus]) HSP 1 Score: 124.8 bits (312), Expect = 1.2e-25 Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0
BLAST of CsGy2G007080.1 vs. NCBI nr
Match: KGN54497.1 (hypothetical protein Csa_4G339000 [Cucumis sativus]) HSP 1 Score: 68.2 bits (165), Expect = 1.4e-08 Identity = 37/76 (48.68%), Postives = 48/76 (63.16%), Query Frame = 0
BLAST of CsGy2G007080.1 vs. TrEMBL
Match: tr|A0A0A0LHG9|A0A0A0LHG9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G071930 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 5.7e-35 Identity = 70/75 (93.33%), Postives = 73/75 (97.33%), Query Frame = 0
BLAST of CsGy2G007080.1 vs. TrEMBL
Match: tr|A0A0A0LJG5|A0A0A0LJG5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072430 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 1.4e-33 Identity = 68/74 (91.89%), Postives = 71/74 (95.95%), Query Frame = 0
BLAST of CsGy2G007080.1 vs. TrEMBL
Match: tr|A0A0A0LKF5|A0A0A0LKF5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070930 PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 8.3e-26 Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0
BLAST of CsGy2G007080.1 vs. TrEMBL
Match: tr|A0A0A0L1R8|A0A0A0L1R8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G339000 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 9.2e-09 Identity = 37/76 (48.68%), Postives = 48/76 (63.16%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
|