CsGy2G001220.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCAAGAACGTTCGAGAAACAAACGGGCAGTCGAAAGCGGGCAAGAACTTTCCAGAGAAACAATCCTCCTTCTCTCTATATATAATCCATTGCAATCAACGTTGAAATCAAATCATAAATTTCGAATTCTCTTCGTTTTCTTTTTCTCCATTCTCAAATTCTCAACAACAATGCCGAGCCGATTCCCCGGAGCCCTATCTCAAGATTGGGAGCCAGTAGTTCTCCACAAGGCGAAGCCAAAAGCTCAGGCCCTTCGTGATCCGAAGGCAGTGAACCAAGCGATCCGATCCGGCGCACCGGTTCAGACAGTGAAGAAATTCGACGCTGGCTTGAACAAGAAAGTCACAGCGGCGCCAGTGAACGCAAGGAAGCTGGAGGAAGGGACCGAACCGGCAGCGCTGGACCGGGTGGCGGTTGAGGTGAGACAGGCGATTCAGAAGGCTCGATTGGAGAAGAAGATGAGCCAAGCAGAACTGGCGAAACAGATTAACGAACGGACTCAGGTTGTGCAAGAATATGAAAATGGGAAGGCGGTGCCGAATCAAGCGGTTTTGGCCAAGATGGAGAAAGTTTTGGGCGTGAAACTTCGAGGAAGATCGGGGAAATGA ATGTCTCAAGAACGTTCGAGAAACAAACGGGCAGTCGAAAGCGGGCAAGAACTTTCCAGAGAAACAATCCTCCTTCTCTCTATATATAATCCATTGCAATCAACGTTGAAATCAAATCATAAATTTCGAATTCTCTTCGTTTTCTTTTTCTCCATTCTCAAATTCTCAACAACAATGCCGAGCCGATTCCCCGGAGCCCTATCTCAAGATTGGGAGCCAGTAGTTCTCCACAAGGCGAAGCCAAAAGCTCAGGCCCTTCGTGATCCGAAGGCAGTGAACCAAGCGATCCGATCCGGCGCACCGGTTCAGACAGTGAAGAAATTCGACGCTGGCTTGAACAAGAAAGTCACAGCGGCGCCAGTGAACGCAAGGAAGCTGGAGGAAGGGACCGAACCGGCAGCGCTGGACCGGGTGGCGGTTGAGGTGAGACAGGCGATTCAGAAGGCTCGATTGGAGAAGAAGATGAGCCAAGCAGAACTGGCGAAACAGATTAACGAACGGACTCAGGTTGTGCAAGAATATGAAAATGGGAAGGCGGTGCCGAATCAAGCGGTTTTGGCCAAGATGGAGAAAGTTTTGGGCGTGAAACTTCGAGGAAGATCGGGGAAATGA ATGTCTCAAGAACGTTCGAGAAACAAACGGGCAGTCGAAAGCGGGCAAGAACTTTCCAGAGAAACAATCCTCCTTCTCTCTATATATAATCCATTGCAATCAACGTTGAAATCAAATCATAAATTTCGAATTCTCTTCGTTTTCTTTTTCTCCATTCTCAAATTCTCAACAACAATGCCGAGCCGATTCCCCGGAGCCCTATCTCAAGATTGGGAGCCAGTAGTTCTCCACAAGGCGAAGCCAAAAGCTCAGGCCCTTCGTGATCCGAAGGCAGTGAACCAAGCGATCCGATCCGGCGCACCGGTTCAGACAGTGAAGAAATTCGACGCTGGCTTGAACAAGAAAGTCACAGCGGCGCCAGTGAACGCAAGGAAGCTGGAGGAAGGGACCGAACCGGCAGCGCTGGACCGGGTGGCGGTTGAGGTGAGACAGGCGATTCAGAAGGCTCGATTGGAGAAGAAGATGAGCCAAGCAGAACTGGCGAAACAGATTAACGAACGGACTCAGGTTGTGCAAGAATATGAAAATGGGAAGGCGGTGCCGAATCAAGCGGTTTTGGCCAAGATGGAGAAAGTTTTGGGCGTGAAACTTCGAGGAAGATCGGGGAAATGA MSQERSRNKRAVESGQELSRETILLLSIYNPLQSTLKSNHKFRILFVFFFSILKFSTTMPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTAAPVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK
BLAST of CsGy2G001220.1 vs. NCBI nr
Match: XP_008458302.1 (PREDICTED: multiprotein-bridging factor 1c [Cucumis melo]) HSP 1 Score: 285.4 bits (729), Expect = 1.5e-73 Identity = 157/196 (80.10%), Postives = 167/196 (85.20%), Query Frame = 0
BLAST of CsGy2G001220.1 vs. NCBI nr
Match: XP_004139340.1 (PREDICTED: multiprotein-bridging factor 1c [Cucumis sativus] >KGN60623.1 hypothetical protein Csa_2G004720 [Cucumis sativus]) HSP 1 Score: 271.9 bits (694), Expect = 1.7e-69 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of CsGy2G001220.1 vs. NCBI nr
Match: XP_022965996.1 (multiprotein-bridging factor 1c [Cucurbita maxima] >XP_023537921.1 multiprotein-bridging factor 1c [Cucurbita pepo subsp. pepo]) HSP 1 Score: 254.6 bits (649), Expect = 2.8e-64 Identity = 135/145 (93.10%), Postives = 138/145 (95.17%), Query Frame = 0
BLAST of CsGy2G001220.1 vs. NCBI nr
Match: XP_022937454.1 (multiprotein-bridging factor 1c [Cucurbita moschata]) HSP 1 Score: 253.1 bits (645), Expect = 8.2e-64 Identity = 134/145 (92.41%), Postives = 137/145 (94.48%), Query Frame = 0
BLAST of CsGy2G001220.1 vs. NCBI nr
Match: PON73318.1 (Transcription regulator, DNA-binding [Parasponia andersonii]) HSP 1 Score: 233.8 bits (595), Expect = 5.2e-58 Identity = 126/149 (84.56%), Postives = 136/149 (91.28%), Query Frame = 0
BLAST of CsGy2G001220.1 vs. TAIR10
Match: AT3G24500.1 (multiprotein bridging factor 1C) HSP 1 Score: 216.9 bits (551), Expect = 1.2e-56 Identity = 119/148 (80.41%), Postives = 130/148 (87.84%), Query Frame = 0
BLAST of CsGy2G001220.1 vs. TAIR10
Match: AT3G58680.1 (multiprotein bridging factor 1B) HSP 1 Score: 141.4 bits (355), Expect = 6.3e-34 Identity = 73/137 (53.28%), Postives = 104/137 (75.91%), Query Frame = 0
BLAST of CsGy2G001220.1 vs. TAIR10
Match: AT2G42680.1 (multiprotein bridging factor 1A) HSP 1 Score: 134.8 bits (338), Expect = 5.9e-32 Identity = 69/137 (50.36%), Postives = 102/137 (74.45%), Query Frame = 0
BLAST of CsGy2G001220.1 vs. Swiss-Prot
Match: sp|Q9LV58|MBF1C_ARATH (Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 2.1e-55 Identity = 119/148 (80.41%), Postives = 130/148 (87.84%), Query Frame = 0
BLAST of CsGy2G001220.1 vs. Swiss-Prot
Match: sp|Q9LXT3|MBF1B_ARATH (Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=2 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 1.1e-32 Identity = 73/137 (53.28%), Postives = 104/137 (75.91%), Query Frame = 0
BLAST of CsGy2G001220.1 vs. Swiss-Prot
Match: sp|Q9SJI8|MBF1A_ARATH (Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.1e-30 Identity = 69/137 (50.36%), Postives = 102/137 (74.45%), Query Frame = 0
BLAST of CsGy2G001220.1 vs. Swiss-Prot
Match: sp|Q6GPQ6|EDF1_XENLA (Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis OX=8355 GN=edf1 PE=2 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.4e-19 Identity = 60/132 (45.45%), Postives = 84/132 (63.64%), Query Frame = 0
BLAST of CsGy2G001220.1 vs. Swiss-Prot
Match: sp|Q9JMG1|EDF1_MOUSE (Endothelial differentiation-related factor 1 OS=Mus musculus OX=10090 GN=Edf1 PE=1 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.2e-18 Identity = 57/132 (43.18%), Postives = 84/132 (63.64%), Query Frame = 0
BLAST of CsGy2G001220.1 vs. TrEMBL
Match: tr|A0A1S3C8T1|A0A1S3C8T1_CUCME (multiprotein-bridging factor 1c OS=Cucumis melo OX=3656 GN=LOC103497758 PE=4 SV=1) HSP 1 Score: 285.4 bits (729), Expect = 9.9e-74 Identity = 157/196 (80.10%), Postives = 167/196 (85.20%), Query Frame = 0
BLAST of CsGy2G001220.1 vs. TrEMBL
Match: tr|A0A0A0LFV9|A0A0A0LFV9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004720 PE=4 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 1.1e-69 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of CsGy2G001220.1 vs. TrEMBL
Match: tr|A0A2P5DJ54|A0A2P5DJ54_PARAD (Transcription regulator, DNA-binding OS=Parasponia andersonii OX=3476 GN=PanWU01x14_058220 PE=4 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 3.4e-58 Identity = 126/149 (84.56%), Postives = 136/149 (91.28%), Query Frame = 0
BLAST of CsGy2G001220.1 vs. TrEMBL
Match: tr|A0A2P5F9R4|A0A2P5F9R4_9ROSA (Transcription regulator, DNA-binding OS=Trema orientalis OX=63057 GN=TorRG33x02_095650 PE=4 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 7.6e-58 Identity = 125/147 (85.03%), Postives = 135/147 (91.84%), Query Frame = 0
BLAST of CsGy2G001220.1 vs. TrEMBL
Match: tr|A0A0D2SNV8|A0A0D2SNV8_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_010G069500 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 1.3e-57 Identity = 122/153 (79.74%), Postives = 137/153 (89.54%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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