CsGy1G030330.1 (mRNA) Cucumber (Gy14) v2

Overview
NameCsGy1G030330.1
TypemRNA
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionPentatricopeptide repeat-containing protein At4g28010
LocationChr1 : 28586125 .. 28590224 (-)
Sequence length2304
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTCTCAAATCCATCTCCTCAAACGTTGCTCTGCTCGAGTTCTTCGTATCCACCCCTTTTCTTCGACCCCTTTGCCAAATTCTGTTTCCGATATCGATTCCCACTTAGTTTCCCTTTGCCAAAGTCTTACTCCACGAAACGCCAACCACGCCTTTTCTCTCTTTCATAGTGCCATAGCTTCTAATTCTCTTCCTTCTGGGTTTACCTGCAACGCACTCATGGCTGCTCTCACCAGGACGAGAAATTACCCAATGGCTTTATCTGTTTATGGTAAGATGACTTATGCAAATGTTTTTCTGGGTTTCAGATCACTTTGTTGTTTAATCGAATGCTTTGTTTATACTCGTGAAGTGAATTATGCGTTTGGGGTTCTGGGGTTGATTATTAAACAGGGTTATGTAGTTAGTACCTTTGTTTTCAATGTTATGCTCACGGGGTTGTGTCGAATTGGGGATGTAGAGAGAGCAATTGAGTCGTTTCATGAAATGAAAAGATTTTCGGTATTACCAGATGTGATTACTTATAATGTGCTCATGAACGGACTTTGCAAGAATGAGAAATTTGAAGAAGCGCTTCGATTTCTTGACGAAATGGAGGTGATTTGCCAGCCGAATATGGTGACATATACGACCATGGTGGATGGGCTTTGTAAGGGTGGAAGATTACAAATAGCAGAGGGTTTATTGGAGAGAATGAAGAAGAAGGGATTGCAAGCGGATGTTGTTATGTATAGTGCAGTTATAAGTGGTTTTTGTAACAATGGAAATTCCTCTAGGGGAAAAGAACTCTTCAATGAGATGCTAGAGATGGGAATTTGTCCTAATGTAGTTACATATAGTTGTTTGATGCATGGTTTATGTAAGGAAGGGCAATGGGAGGAAGCAAAGGCAATGCTGAATCTTATGACGGACCGTGGTATTTGCCCTGATGTTGTCACTTATACATGTTTGATCGACGGGCTTTGCAAAAATGGGAGAGCTAAGCAAGCCTTGAACATATTAAATCTGATGCTAGAGAAAGGTGAAGAACCTAATACTGTCACTTATAATGTTCTTCTAGATGGTCTGTGCAAAGGGGGACTAATAGAGGAGTCCTGTAAAGTCATGGATAGTATGATCAAGAAGGGGAAGAATCCTGATATTGTTACTTATAATACTTTGCTCGTAGGACTTTGCAAGGATGGGAAGGTTGATGAAGGAATTTTACTTTTTAATTCAACATTGAAGGATAACTGCCATATTAAACCTGATATTGTCACCTTTAATATGTTGATTCAAGGGCTCTGTAATGAAGGTCGTGTTGAGGAGGCTGTGGAGATCTTTAATACAATGACAGAACAAAGAATCTATGGCGACTTAATGACTTTCAATTTACTAATTGGAGGTTATCTCACAGCAGGAATGATCAACAAGGCTATGGAAATGTGGAAGCATGTATTAAACTTGGGGTTTGTTCCTAATTCAAATACCTACAGTGTAATGATTAAAGGACTTTGTGGCTTGGGTATGATTAGCATTGCTAAAGGACTTTTTGGCAGAATGAGAATACATGGGCCTAATCCAACTGTGATCGATTACAATACATTGATTTCATCCATGTGCAAGGAAGGTAGTATAGAACAAGCTAAGAGGTTGTTTCAAGAAATGAGTAATGTAAATCTAGAACCAGATATTATTACATTCAATACCATAATCAATGGATCTCTAAAAGCTGGGGATTTGTCGTATTTCCAAGAGCTACTAATGGAAATGGTTGGAAAAGGCTTAGCTCCAGATGCTGTAACATTTTCAACTTTAATTAATCGATTATCAAAAAGTGGTCTGATGTCTGAAGCTAAAATTGTTTTTGAGAAATTGATTGCTTGTGGCTTGACTCCAGATGTCTTTGTATATGATTCCTTACTAAAGGCATATCGTTTAAACAATGAAACTGCAGAAATTATTGGCTTGCTCAACGATATGGCCAAAAAGAGTGTTGTTCTTGACCAAGAATTAACTTGCACCATCTTAACATGCCTTTGCCAGAGTTCAGATCATGCTGCTATCTTGGATTCCCTGCCAAACTTTTCACAACCAACATCGGATGGAAAACAAATAACATGCAGTGAATTGTTGCTTAGACTTCATAAATCTCATCCAGAGCTTAAGTTACCTGTTGAAAATTAAAGACCAAATCTAATTTCTTAAGATCAGACTTGGTATCTTATCATCTGTTCTCTGCGAGTCCTTTATTCTTGCTATTTCATATCCTTGATCAAGGTTCACCTCCCAAACAATCTTTTTCAAGTAAGTCATTTTGCACGTTTCCCTTTTTTAATACTGACTTCTCTTACTGTCTTGTAATGTGTACAAGTTTTCTTTTAGCAACAATTTATCCATTTTGTCTCTGGCCTCTCACTCTTCCTTTTCAATTTTCCATTTGCTTCCATAATAGCATGAAAACGTCGAGTTCTAAATGAATAGATTTTCAGTTTCCATGCTGGGGATGATAAAAGCATTGAAGGAAATAAGAATAAGGATATCAAGGTGGTAACTGAGGGACTAGGTTTCTTTTCTAACGATGATACTCAGTTATACAGAATTACATTACCCTGGTCAAAATTAAATACCAATCAGGCAATACTAATATGTTCATTGAAGTATTCAATATTCAAAATTGTAGTAAAATAGATCTTCAGGGAGTTTTAGCTCTAGTTTATGATTTCGTGTACTTTTGTTTATGATTAATCATGCAGAGTTTCTTAAAATTATTGCATATAGCTGCTTCACATTTGGTTAACATCAACCATTACCAGTACATCTTTGGAGATGTATGACAGATATAATTGTTGTGGTAGTATGTTTTTTAATTTTCACGTGATTTCTGAGAGTAGACTTGCACTTCAGGAGGATGTGCTCATGGTGCTACTAAAGAATGGTGGACTAATGGGAGCGAGTGTGGTTCAATGTTCCATTGCTATGGTGTTGACAGTGTCGATCTATGATGAGGAGTCTTGTATACATTTATAGCATTTGAAGAGGATGTTCAGCTCTACACTTCTACATTTATCATCACTCTTGTGGGAAGAATTCTGTTGGTCCATTGGGATAAGGCTATGTTGTGTTTGGCCCCCATCTGCATTTCTCAGCAACATCTGTTGGGCATGTTCCAAATCCAGAAGGGTAGAAACTGTAAAAGGTAATCAATGCTTTCCACTTTCTCTTTATTGGTTTGAAGGCAAAGGAGAGGCAGGTCGCATGGCGTGGAAATGAATTTACGACATGTCTATGAGTGATCGTGATTCTAAAATGATTCATTTTTGTGATTTTTAAAAATCACTCTATAAAATGTTTTTACATATTCAAAATCAATTTTTACAGCACTGAAGAAAAAATGTGTTTACAAGTTTCATTCAACATGACAAAAGTAAATTTAGTTATTTCATTATCACTCGTAAACATGCACTTAAAACTGGCGATATATTTAAAACAGAAACGTTATCAAAAAGATCTCTAGGATGATCTCTAAGATTCCACAGTTTTGCTGGGATTGAAGACAAGTTAGGAGATTTTGCTACGTCAACGGAAGAAGCTAAGTTCTTGTTCTTTGTTGTAAGCCTGTGATTTGAAAGATGATTTTTTTCTATTGAATTTAGAACTTAAATAACATTATTGTACAACTTGTGTGTGGAATAGATCTTGTTCGGCCTATAAGTTAAATATCTTACCAGTCATCTTAGCAACTAAATATTAATAGGGTTAGATGGTGGTTGTTTGAGAATAGCTGAGACGTTCACAAGTTAACATCAACACTCTTTTTTTACATTTAGTGATGTTACAACTTTAGCTTTGGTAGACCCATTCAAAAGATGCTATACATATTTTGTAACTATGGGTACAGATGTACATGTTTGTGTAAATGAAGTTATCATAAATTTTGACATAACTTCGTTTTTAAGTATAGCATTAGAAAAATGTATTTACCATTTCTCATGAAGTATTGAAGTGGCAGGATGCTATGTTGATTGATAGTCATAAAAGAACAGAGTAGATTTATAATTATTATTATCATTCAATTAGGTGGAGGGAAATTGGATCACATCCCTCGTGATCACTAA

mRNA sequence

ATGAATTCTCAAATCCATCTCCTCAAACGTTGCTCTGCTCGAGTTCTTCGTATCCACCCCTTTTCTTCGACCCCTTTGCCAAATTCTGTTTCCGATATCGATTCCCACTTAGTTTCCCTTTGCCAAAGTCTTACTCCACGAAACGCCAACCACGCCTTTTCTCTCTTTCATAGTGCCATAGCTTCTAATTCTCTTCCTTCTGGGTTTACCTGCAACGCACTCATGGCTGCTCTCACCAGGACGAGAAATTACCCAATGGCTTTATCTGTTTATGGTAAGATGACTTATGCAAATGTTTTTCTGGGTTTCAGATCACTTTGTTGTTTAATCGAATGCTTTGTTTATACTCGTGAAGTGAATTATGCGTTTGGGGTTCTGGGGTTGATTATTAAACAGGGTTATGTAGTTAGTACCTTTGTTTTCAATGTTATGCTCACGGGGTTGTGTCGAATTGGGGATGTAGAGAGAGCAATTGAGTCGTTTCATGAAATGAAAAGATTTTCGGTATTACCAGATGTGATTACTTATAATGTGCTCATGAACGGACTTTGCAAGAATGAGAAATTTGAAGAAGCGCTTCGATTTCTTGACGAAATGGAGGTGATTTGCCAGCCGAATATGGTGACATATACGACCATGGTGGATGGGCTTTGTAAGGGTGGAAGATTACAAATAGCAGAGGGTTTATTGGAGAGAATGAAGAAGAAGGGATTGCAAGCGGATGTTGTTATGTATAGTGCAGTTATAAGTGGTTTTTGTAACAATGGAAATTCCTCTAGGGGAAAAGAACTCTTCAATGAGATGCTAGAGATGGGAATTTGTCCTAATGTAGTTACATATAGTTGTTTGATGCATGGTTTATGTAAGGAAGGGCAATGGGAGGAAGCAAAGGCAATGCTGAATCTTATGACGGACCGTGGTATTTGCCCTGATGTTGTCACTTATACATGTTTGATCGACGGGCTTTGCAAAAATGGGAGAGCTAAGCAAGCCTTGAACATATTAAATCTGATGCTAGAGAAAGGTGAAGAACCTAATACTGTCACTTATAATGTTCTTCTAGATGGTCTGTGCAAAGGGGGACTAATAGAGGAGTCCTGTAAAGTCATGGATAGTATGATCAAGAAGGGGAAGAATCCTGATATTGTTACTTATAATACTTTGCTCGTAGGACTTTGCAAGGATGGGAAGGTTGATGAAGGAATTTTACTTTTTAATTCAACATTGAAGGATAACTGCCATATTAAACCTGATATTGTCACCTTTAATATGTTGATTCAAGGGCTCTGTAATGAAGGTCGTGTTGAGGAGGCTGTGGAGATCTTTAATACAATGACAGAACAAAGAATCTATGGCGACTTAATGACTTTCAATTTACTAATTGGAGGTTATCTCACAGCAGGAATGATCAACAAGGCTATGGAAATGTGGAAGCATGTATTAAACTTGGGGTTTGTTCCTAATTCAAATACCTACAGTGTAATGATTAAAGGACTTTGTGGCTTGGGTATGATTAGCATTGCTAAAGGACTTTTTGGCAGAATGAGAATACATGGGCCTAATCCAACTGTGATCGATTACAATACATTGATTTCATCCATGTGCAAGGAAGGTAGTATAGAACAAGCTAAGAGGTTGTTTCAAGAAATGAGTAATGTAAATCTAGAACCAGATATTATTACATTCAATACCATAATCAATGGATCTCTAAAAGCTGGGGATTTGTCGTATTTCCAAGAGCTACTAATGGAAATGGTTGGAAAAGGCTTAGCTCCAGATGCTGTAACATTTTCAACTTTAATTAATCGATTATCAAAAAGTGGTCTGATGTCTGAAGCTAAAATTGTTTTTGAGAAATTGATTGCTTGTGGCTTGACTCCAGATGTCTTTGTATATGATTCCTTACTAAAGGCATATCGTTTAAACAATGAAACTGCAGAAATTATTGGCTTGCTCAACGATATGGCCAAAAAGAGTGTTGTTCTTGACCAAGAATTAACTTGCACCATCTTAACATGCCTTTGCCAGAGTTCAGATCATGCTGCTATCTTGGATTCCCTGCCAAACTTTTCACAACCAACATCGGATGGAAAACAAATAACATGCAGTGAATTGTTGCTTAGACTTCATAAATCTCATCCAGAGCTTAAGTTACCTGAGGATGTGCTCATGGTGCTACTAAAGAATGGTGGACTAATGGGAGCGAGTGTGGTTCAATGTTCCATTGCTATGGTGTTGACAGTGTCGATCTATGATGAGGAGTCTTGTGGAGGGAAATTGGATCACATCCCTCGTGATCACTAA

Coding sequence (CDS)

ATGAATTCTCAAATCCATCTCCTCAAACGTTGCTCTGCTCGAGTTCTTCGTATCCACCCCTTTTCTTCGACCCCTTTGCCAAATTCTGTTTCCGATATCGATTCCCACTTAGTTTCCCTTTGCCAAAGTCTTACTCCACGAAACGCCAACCACGCCTTTTCTCTCTTTCATAGTGCCATAGCTTCTAATTCTCTTCCTTCTGGGTTTACCTGCAACGCACTCATGGCTGCTCTCACCAGGACGAGAAATTACCCAATGGCTTTATCTGTTTATGGTAAGATGACTTATGCAAATGTTTTTCTGGGTTTCAGATCACTTTGTTGTTTAATCGAATGCTTTGTTTATACTCGTGAAGTGAATTATGCGTTTGGGGTTCTGGGGTTGATTATTAAACAGGGTTATGTAGTTAGTACCTTTGTTTTCAATGTTATGCTCACGGGGTTGTGTCGAATTGGGGATGTAGAGAGAGCAATTGAGTCGTTTCATGAAATGAAAAGATTTTCGGTATTACCAGATGTGATTACTTATAATGTGCTCATGAACGGACTTTGCAAGAATGAGAAATTTGAAGAAGCGCTTCGATTTCTTGACGAAATGGAGGTGATTTGCCAGCCGAATATGGTGACATATACGACCATGGTGGATGGGCTTTGTAAGGGTGGAAGATTACAAATAGCAGAGGGTTTATTGGAGAGAATGAAGAAGAAGGGATTGCAAGCGGATGTTGTTATGTATAGTGCAGTTATAAGTGGTTTTTGTAACAATGGAAATTCCTCTAGGGGAAAAGAACTCTTCAATGAGATGCTAGAGATGGGAATTTGTCCTAATGTAGTTACATATAGTTGTTTGATGCATGGTTTATGTAAGGAAGGGCAATGGGAGGAAGCAAAGGCAATGCTGAATCTTATGACGGACCGTGGTATTTGCCCTGATGTTGTCACTTATACATGTTTGATCGACGGGCTTTGCAAAAATGGGAGAGCTAAGCAAGCCTTGAACATATTAAATCTGATGCTAGAGAAAGGTGAAGAACCTAATACTGTCACTTATAATGTTCTTCTAGATGGTCTGTGCAAAGGGGGACTAATAGAGGAGTCCTGTAAAGTCATGGATAGTATGATCAAGAAGGGGAAGAATCCTGATATTGTTACTTATAATACTTTGCTCGTAGGACTTTGCAAGGATGGGAAGGTTGATGAAGGAATTTTACTTTTTAATTCAACATTGAAGGATAACTGCCATATTAAACCTGATATTGTCACCTTTAATATGTTGATTCAAGGGCTCTGTAATGAAGGTCGTGTTGAGGAGGCTGTGGAGATCTTTAATACAATGACAGAACAAAGAATCTATGGCGACTTAATGACTTTCAATTTACTAATTGGAGGTTATCTCACAGCAGGAATGATCAACAAGGCTATGGAAATGTGGAAGCATGTATTAAACTTGGGGTTTGTTCCTAATTCAAATACCTACAGTGTAATGATTAAAGGACTTTGTGGCTTGGGTATGATTAGCATTGCTAAAGGACTTTTTGGCAGAATGAGAATACATGGGCCTAATCCAACTGTGATCGATTACAATACATTGATTTCATCCATGTGCAAGGAAGGTAGTATAGAACAAGCTAAGAGGTTGTTTCAAGAAATGAGTAATGTAAATCTAGAACCAGATATTATTACATTCAATACCATAATCAATGGATCTCTAAAAGCTGGGGATTTGTCGTATTTCCAAGAGCTACTAATGGAAATGGTTGGAAAAGGCTTAGCTCCAGATGCTGTAACATTTTCAACTTTAATTAATCGATTATCAAAAAGTGGTCTGATGTCTGAAGCTAAAATTGTTTTTGAGAAATTGATTGCTTGTGGCTTGACTCCAGATGTCTTTGTATATGATTCCTTACTAAAGGCATATCGTTTAAACAATGAAACTGCAGAAATTATTGGCTTGCTCAACGATATGGCCAAAAAGAGTGTTGTTCTTGACCAAGAATTAACTTGCACCATCTTAACATGCCTTTGCCAGAGTTCAGATCATGCTGCTATCTTGGATTCCCTGCCAAACTTTTCACAACCAACATCGGATGGAAAACAAATAACATGCAGTGAATTGTTGCTTAGACTTCATAAATCTCATCCAGAGCTTAAGTTACCTGAGGATGTGCTCATGGTGCTACTAAAGAATGGTGGACTAATGGGAGCGAGTGTGGTTCAATGTTCCATTGCTATGGTGTTGACAGTGTCGATCTATGATGAGGAGTCTTGTGGAGGGAAATTGGATCACATCCCTCGTGATCACTAA

Protein sequence

MNSQIHLLKRCSARVLRIHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAIASNSLPSGFTCNALMAALTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTREVNYAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIESFHEMKRFSVLPDVITYNVLMNGLCKNEKFEEALRFLDEMEVICQPNMVTYTTMVDGLCKGGRLQIAEGLLERMKKKGLQADVVMYSAVISGFCNNGNSSRGKELFNEMLEMGICPNVVTYSCLMHGLCKEGQWEEAKAMLNLMTDRGICPDVVTYTCLIDGLCKNGRAKQALNILNLMLEKGEEPNTVTYNVLLDGLCKGGLIEESCKVMDSMIKKGKNPDIVTYNTLLVGLCKDGKVDEGILLFNSTLKDNCHIKPDIVTFNMLIQGLCNEGRVEEAVEIFNTMTEQRIYGDLMTFNLLIGGYLTAGMINKAMEMWKHVLNLGFVPNSNTYSVMIKGLCGLGMISIAKGLFGRMRIHGPNPTVIDYNTLISSMCKEGSIEQAKRLFQEMSNVNLEPDIITFNTIINGSLKAGDLSYFQELLMEMVGKGLAPDAVTFSTLINRLSKSGLMSEAKIVFEKLIACGLTPDVFVYDSLLKAYRLNNETAEIIGLLNDMAKKSVVLDQELTCTILTCLCQSSDHAAILDSLPNFSQPTSDGKQITCSELLLRLHKSHPELKLPEDVLMVLLKNGGLMGASVVQCSIAMVLTVSIYDEESCGGKLDHIPRDH
Homology
[Close]
BLAST of CsGy1G030330.1 vs. NCBI nr
Match: XP_011660167.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g28010 [Cucumis sativus])

HSP 1 Score: 374.8 bits (961), Expect = 7.1e-100
Identity = 719/719 (100.00%), Postives = 719/719 (100.00%), Query Frame = 0 

Query: 1   MNSQIHLLKRCSARVLRIHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAI 60
           MNSQIHLLKRCSARVLRIHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAI
Sbjct: 1   MNSQIHLLKRCSARVLRIHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAI 60

Query: 61  ASNSLPSGFTCNALMAALTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTREVN 120
           ASNSLPSGFTCNALMAALTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTREVN
Sbjct: 61  ASNSLPSGFTCNALMAALTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTREVN 120

Query: 121 YAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIESFHEMKRFSVLPDVXXXXXXX 180
           YAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIESFHEMKRFSVLPDVXXXXXXX
Sbjct: 121 YAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIESFHEMKRFSVLPDVXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXEVICQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKGLXX 240
           XXXXXXXXXXXXXXXXXXXEVICQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKGLXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXEVICQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKGLXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNCHIXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNCHIXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNCHIXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXTEQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXTEQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXTEQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600

Query: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRLNNETAEIIGLLNDMAKKSV 660
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRLNNETAEIIGLLNDMAKKSV
Sbjct: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRLNNETAEIIGLLNDMAKKSV 660

Query: 661 VLDQELTCTILTCLCQSSDHAAILDSLPNFSQPTSDGKQITCSELLLRLHKSHPELKLP 720
           VLDQELTCTILTCLCQSSDHAAILDSLPNFSQPTSDGKQITCSELLLRLHKSHPELKLP
Sbjct: 661 VLDQELTCTILTCLCQSSDHAAILDSLPNFSQPTSDGKQITCSELLLRLHKSHPELKLP 719

[Close]
BLAST of CsGy1G030330.1 vs. NCBI nr
Match: KGN66556.1 (hypothetical protein Csa_1G629130 [Cucumis sativus])

HSP 1 Score: 346.3 bits (887), Expect = 2.7e-91
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0 

Query: 1   MNSQIHLLKRCSARVLRIHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAI 60
           MNSQIHLLKRCSARVLRIHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAI
Sbjct: 1   MNSQIHLLKRCSARVLRIHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAI 60

Query: 61  ASNSLPSGFTCNALMAALTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTREVN 120
           ASNSLPSGFTCNALMAALTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTREVN
Sbjct: 61  ASNSLPSGFTCNALMAALTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTREVN 120

Query: 121 YAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIESFHEMKRFSVLPDVXXXXXXX 180
           YAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIESFHEMKRFSVLPDVXXXXXXX
Sbjct: 121 YAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIESFHEMKRFSVLPDVXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXEVICQ 205
           XXXXXXXXXXXXXXXXXXXEVICQ
Sbjct: 181 XXXXXXXXXXXXXXXXXXXEVICQ 204

[Close]
BLAST of CsGy1G030330.1 vs. NCBI nr
Match: XP_008450333.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g28010 [Cucumis melo] >XP_008450334.1 PREDICTED: pentatricopeptide repeat-containing protein At4g28010 [Cucumis melo] >XP_008450335.1 PREDICTED: pentatricopeptide repeat-containing protein At4g28010 [Cucumis melo] >XP_008450337.1 PREDICTED: pentatricopeptide repeat-containing protein At4g28010 [Cucumis melo] >XP_016900904.1 PREDICTED: pentatricopeptide repeat-containing protein At4g28010 [Cucumis melo])

HSP 1 Score: 314.3 bits (804), Expect = 1.1e-81
Identity = 157/169 (92.90%), Postives = 162/169 (95.86%), Query Frame = 0 

Query: 1   MNSQIHLLKRCSARVLRIHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAI 60
           MNSQ HLLKRCSARVLRIHPFSSTPLPNSVSD+DSHLVSLCQ+LTPRNANHAFSLFH++I
Sbjct: 1   MNSQTHLLKRCSARVLRIHPFSSTPLPNSVSDVDSHLVSLCQNLTPRNANHAFSLFHTSI 60

Query: 61  ASNSLPSGFTCNALMAALTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTREVN 120
           ASNSLPSG TCN LMAALTRTRNYPMALSVYGKMT ANVFLGFRSLCCLIECF+YTREVN
Sbjct: 61  ASNSLPSGLTCNFLMAALTRTRNYPMALSVYGKMTDANVFLGFRSLCCLIECFIYTREVN 120

Query: 121 YAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIESFHEMKRFSV 170
            AFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAI  FHEMKRFSV
Sbjct: 121 SAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIGLFHEMKRFSV 169

[Close]
BLAST of CsGy1G030330.1 vs. NCBI nr
Match: XP_022961234.1 (pentatricopeptide repeat-containing protein At4g28010-like [Cucurbita moschata] >XP_022961235.1 pentatricopeptide repeat-containing protein At4g28010-like [Cucurbita moschata])

HSP 1 Score: 300.8 bits (769), Expect = 1.3e-77
Identity = 151/176 (85.80%), Postives = 162/176 (92.05%), Query Frame = 0 

Query: 1   MNSQIHLLKRCSARVLRIH---PFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFH 60
           MNSQ HLLKRC  RVLRIH   PFSS PLPNSVSDIDSHLVSLC++LTPRNAN AFS+FH
Sbjct: 1   MNSQAHLLKRCPVRVLRIHYIQPFSSIPLPNSVSDIDSHLVSLCKNLTPRNANEAFSVFH 60

Query: 61  SAIASNSLPSGFTCNALMAALTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTR 120
           SAIASNSLPSG TCN+LMAALTRTRNY MALSVYGKM++ANVF+GFRSLCCLIECFVYTR
Sbjct: 61  SAIASNSLPSGLTCNSLMAALTRTRNYEMALSVYGKMSFANVFVGFRSLCCLIECFVYTR 120

Query: 121 EVNYAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIESFHEMKRFSVLPDV 174
            V +AFGV+GLIIKQGY+VSTFVFNVMLTGLCRIGDV+RA E FHEMKRFSVLPDV
Sbjct: 121 GVKFAFGVVGLIIKQGYIVSTFVFNVMLTGLCRIGDVKRATELFHEMKRFSVLPDV 176

[Close]
BLAST of CsGy1G030330.1 vs. NCBI nr
Match: XP_023516928.1 (pentatricopeptide repeat-containing protein At4g28010-like [Cucurbita pepo subsp. pepo] >XP_023516929.1 pentatricopeptide repeat-containing protein At4g28010-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 297.0 bits (759), Expect = 1.9e-76
Identity = 147/176 (83.52%), Postives = 162/176 (92.05%), Query Frame = 0 

Query: 1   MNSQIHLLKRCSARVLRIH---PFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFH 60
           MN+Q HLLKRC  RVLRIH   PFSS PLPNSV+DIDSHL+SLC++LTPRNAN AFS+FH
Sbjct: 1   MNAQAHLLKRCPVRVLRIHYIQPFSSIPLPNSVNDIDSHLISLCKNLTPRNANEAFSVFH 60

Query: 61  SAIASNSLPSGFTCNALMAALTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTR 120
           +AIASNSLPSG TCN+LMAALTRTRNY MALSVYGKM++ANVF+GFRSLCCLIECFVYTR
Sbjct: 61  NAIASNSLPSGLTCNSLMAALTRTRNYEMALSVYGKMSFANVFVGFRSLCCLIECFVYTR 120

Query: 121 EVNYAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIESFHEMKRFSVLPDV 174
            V +AFGV+GLIIKQGY+VSTFVFNVMLTGLCRIGDV+RA E FHEMKRFSVLPDV
Sbjct: 121 GVKFAFGVVGLIIKQGYIVSTFVFNVMLTGLCRIGDVKRATELFHEMKRFSVLPDV 176

[Close]
BLAST of CsGy1G030330.1 vs. TAIR10
Match: AT4G28010.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 56.2 bits (134), Expect = 1.0e-07
Identity = 37/95 (38.95%), Postives = 54/95 (56.84%), Query Frame = 0 

Query: 18  IHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAIASNSLPSGFTCNALMAA 77
           ++P   + L N+ S+ ++ L SLC+   P+  N A S+F  A+ S S    F  N LMA 
Sbjct: 24  LNPRVYSKLVNAFSETETKLRSLCEDSNPQLKN-AVSVFQQAVDSGS-SLAFAGNNLMAK 83

Query: 78  LTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIEC 113
           L R+RN+ +A S Y KM   + F+ F SL  L+EC
Sbjct: 84  LVRSRNHELAFSFYRKMLETDTFINFVSLSGLLEC 116

[Close]
BLAST of CsGy1G030330.1 vs. TAIR10
Match: AT1G12775.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 53.1 bits (126), Expect = 8.6e-07
Identity = 32/106 (30.19%), Postives = 52/106 (49.06%), Query Frame = 0 

Query: 35  SHLVSLCQSLTPRNANHAFSLFHSAIASNSLPSGFTCNALMAALTRTRNYPMALSVYGKM 94
           S+   L   L    A+ A  LF   I S  LP+    N L +A+ +T+ Y + L++  +M
Sbjct: 55  SYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQM 114

Query: 95  TYANVFLGFRSLCCLIECFVYTREVNYAFGVLGLIIKQGYVVSTFV 141
               +     +L  +I CF   R+++YAF  +G I+K GY   T +
Sbjct: 115 ESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVI 160

[Close]
BLAST of CsGy1G030330.1 vs. Swiss-Prot
Match: sp|Q9SUD8|PP340_ARATH (Pentatricopeptide repeat-containing protein At4g28010 OS=Arabidopsis thaliana OX=3702 GN=At4g28010 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.8e-06
Identity = 37/95 (38.95%), Postives = 54/95 (56.84%), Query Frame = 0 

Query: 18  IHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAIASNSLPSGFTCNALMAA 77
           ++P   + L N+ S+ ++ L SLC+   P+  N A S+F  A+ S S    F  N LMA 
Sbjct: 24  LNPRVYSKLVNAFSETETKLRSLCEDSNPQLKN-AVSVFQQAVDSGS-SLAFAGNNLMAK 83

Query: 78  LTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIEC 113
           L R+RN+ +A S Y KM   + F+ F SL  L+EC
Sbjct: 84  LVRSRNHELAFSFYRKMLETDTFINFVSLSGLLEC 116

[Close]
BLAST of CsGy1G030330.1 vs. Swiss-Prot
Match: sp|Q9LPX2|PPR39_ARATH (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.5e-05
Identity = 32/106 (30.19%), Postives = 52/106 (49.06%), Query Frame = 0 

Query: 35  SHLVSLCQSLTPRNANHAFSLFHSAIASNSLPSGFTCNALMAALTRTRNYPMALSVYGKM 94
           S+   L   L    A+ A  LF   I S  LP+    N L +A+ +T+ Y + L++  +M
Sbjct: 55  SYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQM 114

Query: 95  TYANVFLGFRSLCCLIECFVYTREVNYAFGVLGLIIKQGYVVSTFV 141
               +     +L  +I CF   R+++YAF  +G I+K GY   T +
Sbjct: 115 ESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVI 160

[Close]
BLAST of CsGy1G030330.1 vs. TrEMBL
Match: tr|A0A0A0M2Y3|A0A0A0M2Y3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G629130 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 1.8e-91
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0 

Query: 1   MNSQIHLLKRCSARVLRIHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAI 60
           MNSQIHLLKRCSARVLRIHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAI
Sbjct: 1   MNSQIHLLKRCSARVLRIHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAI 60

Query: 61  ASNSLPSGFTCNALMAALTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTREVN 120
           ASNSLPSGFTCNALMAALTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTREVN
Sbjct: 61  ASNSLPSGFTCNALMAALTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTREVN 120

Query: 121 YAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIESFHEMKRFSVLPDVXXXXXXX 180
           YAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIESFHEMKRFSVLPDVXXXXXXX
Sbjct: 121 YAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIESFHEMKRFSVLPDVXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXEVICQ 205
           XXXXXXXXXXXXXXXXXXXEVICQ
Sbjct: 181 XXXXXXXXXXXXXXXXXXXEVICQ 204

[Close]
BLAST of CsGy1G030330.1 vs. TrEMBL
Match: tr|A0A1S3BP21|A0A1S3BP21_CUCME (pentatricopeptide repeat-containing protein At4g28010 OS=Cucumis melo OX=3656 GN=LOC103491973 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 7.5e-82
Identity = 157/169 (92.90%), Postives = 162/169 (95.86%), Query Frame = 0 

Query: 1   MNSQIHLLKRCSARVLRIHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAI 60
           MNSQ HLLKRCSARVLRIHPFSSTPLPNSVSD+DSHLVSLCQ+LTPRNANHAFSLFH++I
Sbjct: 1   MNSQTHLLKRCSARVLRIHPFSSTPLPNSVSDVDSHLVSLCQNLTPRNANHAFSLFHTSI 60

Query: 61  ASNSLPSGFTCNALMAALTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTREVN 120
           ASNSLPSG TCN LMAALTRTRNYPMALSVYGKMT ANVFLGFRSLCCLIECF+YTREVN
Sbjct: 61  ASNSLPSGLTCNFLMAALTRTRNYPMALSVYGKMTDANVFLGFRSLCCLIECFIYTREVN 120

Query: 121 YAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIESFHEMKRFSV 170
            AFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAI  FHEMKRFSV
Sbjct: 121 SAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIGLFHEMKRFSV 169

[Close]
BLAST of CsGy1G030330.1 vs. TrEMBL
Match: tr|A0A0A0LXI9|A0A0A0LXI9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G629120 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 5.6e-37
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0 

Query: 639 YRLNNETAEIIGLLNDMAKKSVVLDQELTCTILTCLCQSSDHAAILDSLPNFSQPTSDGK 698
           YRLNNETAEIIGLLNDMAKKSVVLDQELTCTILTCLCQSSDHAAILDSLPNFSQPTSDGK
Sbjct: 195 YRLNNETAEIIGLLNDMAKKSVVLDQELTCTILTCLCQSSDHAAILDSLPNFSQPTSDGK 254

Query: 699 QITCSELLLRLHKSHPELKLP 720
           QITCSELLLRLHKSHPELKLP
Sbjct: 255 QITCSELLLRLHKSHPELKLP 275

[Close]
BLAST of CsGy1G030330.1 vs. TrEMBL
Match: tr|A0A251RHV0|A0A251RHV0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G547200 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 5.7e-29
Identity = 74/152 (48.68%), Postives = 99/152 (65.13%), Query Frame = 0 

Query: 21  FSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAIASNSLPSGFTCNALMAALTR 80
           FSS P   S SDI++ L  LC    P+  + A SLF  +I S+ LPSG TCN L+  LTR
Sbjct: 27  FSSIPSTYSCSDIETQLRFLCDKSNPQ-ISEAVSLFQGSIDSDRLPSGGTCNLLVHTLTR 86

Query: 81  TRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTREVNYAFGVLGLIIKQGYVVSTFV 140
           ++NY +A SVY KMT+  +F  F SL CL+ CFV T    +A GVLGL++K+G+ ++ +V
Sbjct: 87  SKNYELAFSVYSKMTHVGIFPSFISLSCLVACFVNTNHAKFAPGVLGLVLKRGFQLNVYV 146

Query: 141 FNVMLTGLCRIGDVERAIESFHEMKRFSVLPD 173
            N+ML GLC  G+VE+A+E F  M R  V PD
Sbjct: 147 VNLMLKGLCSNGEVEKAMELFSVMGRNCVTPD 177

[Close]
BLAST of CsGy1G030330.1 vs. TrEMBL
Match: tr|A0A067L445|A0A067L445_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_22758 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.9e-25
Identity = 70/156 (44.87%), Postives = 103/156 (66.03%), Query Frame = 0 

Query: 18  IHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAIASNSLPSGFTCNALMAA 77
           IH F    L +S+SD+++ L  LC+   P+  + A S+FH AI S+   S   C +L+A+
Sbjct: 21  IHSF-HCKLFSSLSDVEAQLRFLCEEPNPQ-LSEAVSVFHRAIDSSLFLSESACTSLIAS 80

Query: 78  LTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTREVNYAFGVLGLIIKQGYVVS 137
           L +++NY +A SVY KMT+  +   F SL  LI+CFV+ +++N+AF VLGLI+K+G+VVS
Sbjct: 81  LVKSKNYELAFSVYIKMTHVGILPSFISLSRLIDCFVHIQKLNFAFAVLGLILKRGFVVS 140

Query: 138 TFVFNVMLTGLCRIGDVERAIESFHEMKRFSVLPDV 174
           +++ N+ML GLCR G    AI    EMKR  V PD+
Sbjct: 141 SYIMNLMLKGLCRNGKAFEAIYLLREMKRSLVSPDI 174

The following BLAST results are available for this feature:
BLAST of CsGy1G030330.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011660167.17.1e-100100.00PREDICTED: pentatricopeptide repeat-containing protein At4g28010 [Cucumis sativu... [more]
KGN66556.12.7e-91100.00hypothetical protein Csa_1G629130 [Cucumis sativus][more]
XP_008450333.11.1e-8192.90PREDICTED: pentatricopeptide repeat-containing protein At4g28010 [Cucumis melo] ... [more]
XP_022961234.11.3e-7785.80pentatricopeptide repeat-containing protein At4g28010-like [Cucurbita moschata] ... [more]
XP_023516928.11.9e-7683.52pentatricopeptide repeat-containing protein At4g28010-like [Cucurbita pepo subsp... [more]
BLAST of CsGy1G030330.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G28010.11.0e-0738.95Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G12775.18.6e-0730.19Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CsGy1G030330.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SUD8|PP340_ARATH1.8e-0638.95Pentatricopeptide repeat-containing protein At4g28010 OS=Arabidopsis thaliana OX... [more]
sp|Q9LPX2|PPR39_ARATH1.5e-0530.19Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop... [more]
BLAST of CsGy1G030330.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0M2Y3|A0A0A0M2Y3_CUCSA1.8e-91100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G629130 PE=4 SV=1[more]
tr|A0A1S3BP21|A0A1S3BP21_CUCME7.5e-8292.90pentatricopeptide repeat-containing protein At4g28010 OS=Cucumis melo OX=3656 GN... [more]
tr|A0A0A0LXI9|A0A0A0LXI9_CUCSA5.6e-37100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G629120 PE=4 SV=1[more]
tr|A0A251RHV0|A0A251RHV0_PRUPE5.7e-2948.68Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G547200 PE=4 SV=1[more]
tr|A0A067L445|A0A067L445_JATCU2.9e-2544.87Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_22758 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsGy1G030330CsGy1G030330gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsGy1G030330.1CsGy1G030330.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy1G030330.1.CDS.3CsGy1G030330.1.CDS.3CDS
CsGy1G030330.1.CDS.2CsGy1G030330.1.CDS.2CDS
CsGy1G030330.1.CDS.1CsGy1G030330.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy1G030330.1.exon.3CsGy1G030330.1.exon.3exon
CsGy1G030330.1.exon.2CsGy1G030330.1.exon.2exon
CsGy1G030330.1.exon.1CsGy1G030330.1.exon.1exon


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 164..238
e-value: 3.1E-24
score: 87.5
coord: 374..448
e-value: 2.6E-21
score: 77.9
coord: 518..586
e-value: 7.9E-18
score: 66.6
coord: 449..517
e-value: 2.9E-13
score: 51.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 28..163
e-value: 1.6E-17
score: 66.0
coord: 254..373
e-value: 8.5E-42
score: 145.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 588..686
e-value: 1.9E-17
score: 65.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 69..95
e-value: 0.036
score: 14.2
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 383..414
e-value: 1.2E-5
score: 23.1
coord: 313..347
e-value: 9.9E-10
score: 36.0
coord: 208..241
e-value: 1.0E-7
score: 29.7
coord: 348..381
e-value: 2.3E-8
score: 31.7
coord: 420..453
e-value: 1.5E-8
score: 32.3
coord: 595..629
e-value: 5.4E-4
score: 18.0
coord: 140..173
e-value: 1.1E-6
score: 26.4
coord: 491..522
e-value: 6.0E-4
score: 17.8
coord: 456..488
e-value: 1.3E-5
score: 23.1
coord: 243..277
e-value: 2.6E-9
score: 34.7
coord: 278..312
e-value: 9.2E-12
score: 42.4
coord: 527..559
e-value: 7.8E-9
score: 33.2
coord: 174..200
e-value: 4.8E-8
score: 30.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 275..324
e-value: 3.9E-19
score: 68.4
coord: 345..394
e-value: 6.5E-16
score: 58.1
coord: 171..219
e-value: 4.4E-16
score: 58.7
coord: 522..568
e-value: 8.7E-14
score: 51.3
coord: 453..500
e-value: 3.7E-12
score: 46.1
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 588..619
e-value: 1.6E-6
score: 27.6
coord: 133..165
e-value: 3.6E-6
score: 26.5
coord: 236..268
e-value: 3.3E-8
score: 33.0
coord: 415..446
e-value: 2.3E-13
score: 49.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 628..662
score: 7.98
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 558..592
score: 10.38
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 311..345
score: 13.077
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 276..310
score: 13.515
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 593..627
score: 11.038
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 241..275
score: 12.693
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 381..415
score: 10.643
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 67..101
score: 7.651
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 172..202
score: 11.17
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 206..240
score: 12.54
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 488..522
score: 10.446
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 453..487
score: 10.928
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 523..557
score: 12.014
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 418..452
score: 11.849
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 346..380
score: 12.649
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 137..171
score: 11.805
NoneNo IPR availablePANTHERPTHR44149FAMILY NOT NAMEDcoord: 340..509
coord: 491..675
coord: 203..377
coord: 65..276
NoneNo IPR availablePANTHERPTHR44149:SF3SUBFAMILY NOT NAMEDcoord: 340..509
coord: 491..675
coord: 203..377
coord: 65..276
NoneNo IPR availableSUPERFAMILYSSF81901HCP-likecoord: 242..447